ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet98g04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473863.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 252 bits (127), Expect = 6e-64 Identities = 163/175 (93%) Strand = Plus / Plus Query: 162 gctgaagctggtggcgtgcgtggacgcgctcaacggggtggtgcacgcggtggtgggcgc 221 |||||||||| ||||||||||||||||||| |||||| |||||||||||||||| ||||| Sbjct: 222 gctgaagctgctggcgtgcgtggacgcgctgaacgggctggtgcacgcggtggtcggcgc 281 Query: 222 caacgccagcgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgct 281 ||| |||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 282 caaggccagcgacacctgctgcccgctgctgtccggcgtcgccgacctcgacgccgcgct 341 Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagcctcgtgctcccc 336 ||||||||||||| |||||||||||||||||||| |||||||||||| |||||| Sbjct: 342 ctgcctctgcaccgccatcaaggccaaggcgctcggcgtcagcctcgtcctcccc 396
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 252 bits (127), Expect = 6e-64 Identities = 163/175 (93%) Strand = Plus / Plus Query: 162 gctgaagctggtggcgtgcgtggacgcgctcaacggggtggtgcacgcggtggtgggcgc 221 |||||||||| ||||||||||||||||||| |||||| |||||||||||||||| ||||| Sbjct: 77953 gctgaagctgctggcgtgcgtggacgcgctgaacgggctggtgcacgcggtggtcggcgc 78012 Query: 222 caacgccagcgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgct 281 ||| |||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 78013 caaggccagcgacacctgctgcccgctgctgtccggcgtcgccgacctcgacgccgcgct 78072 Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagcctcgtgctcccc 336 ||||||||||||| |||||||||||||||||||| |||||||||||| |||||| Sbjct: 78073 ctgcctctgcaccgccatcaaggccaaggcgctcggcgtcagcctcgtcctcccc 78127 Score = 242 bits (122), Expect = 6e-61 Identities = 173/190 (91%) Strand = Plus / Plus Query: 147 gtgccccgtggacgtgctgaagctggtggcgtgcgtggacgcgctcaacggggtggtgca 206 |||||| |||||| |||||||||| ||||||||||||||||||| |||||| ||||||| Sbjct: 67519 gtgcccggtggacacgctgaagctgctggcgtgcgtggacgcgctgaacgggctggtgca 67578 Query: 207 cgcggtggtgggcgccaacgccagcgagacctgctgcccgctgctgtccggcgtggccga 266 ||||||||| ||||||| |||| |||| |||||||||||||||||||||||||| ||||| Sbjct: 67579 cgcggtggtcggcgccaccgccggcgacacctgctgcccgctgctgtccggcgtcgccga 67638 Query: 267 ccccgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagcct 326 || ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| Sbjct: 67639 cctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcgctcggcctcagcct 67698 Query: 327 cgtgctcccc 336 ||| |||||| Sbjct: 67699 cgtcctcccc 67708
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 252 bits (127), Expect = 6e-64 Identities = 163/175 (93%) Strand = Plus / Plus Query: 162 gctgaagctggtggcgtgcgtggacgcgctcaacggggtggtgcacgcggtggtgggcgc 221 |||||||||| ||||||||||||||||||| |||||| |||||||||||||||| ||||| Sbjct: 31095872 gctgaagctgctggcgtgcgtggacgcgctgaacgggctggtgcacgcggtggtcggcgc 31095931 Query: 222 caacgccagcgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgct 281 ||| |||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 31095932 caaggccagcgacacctgctgcccgctgctgtccggcgtcgccgacctcgacgccgcgct 31095991 Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagcctcgtgctcccc 336 ||||||||||||| |||||||||||||||||||| |||||||||||| |||||| Sbjct: 31095992 ctgcctctgcaccgccatcaaggccaaggcgctcggcgtcagcctcgtcctcccc 31096046 Score = 242 bits (122), Expect = 6e-61 Identities = 173/190 (91%) Strand = Plus / Plus Query: 147 gtgccccgtggacgtgctgaagctggtggcgtgcgtggacgcgctcaacggggtggtgca 206 |||||| |||||| |||||||||| ||||||||||||||||||| |||||| ||||||| Sbjct: 31085438 gtgcccggtggacacgctgaagctgctggcgtgcgtggacgcgctgaacgggctggtgca 31085497 Query: 207 cgcggtggtgggcgccaacgccagcgagacctgctgcccgctgctgtccggcgtggccga 266 ||||||||| ||||||| |||| |||| |||||||||||||||||||||||||| ||||| Sbjct: 31085498 cgcggtggtcggcgccaccgccggcgacacctgctgcccgctgctgtccggcgtcgccga 31085557 Query: 267 ccccgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagcct 326 || ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| Sbjct: 31085558 cctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcgctcggcctcagcct 31085617 Query: 327 cgtgctcccc 336 ||| |||||| Sbjct: 31085618 cgtcctcccc 31085627 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagc 324 ||||||||||||| ||||||||||||||| |||| || ||||| Sbjct: 32827253 ctgcctctgcaccgccatcaaggccaaggtgctcgacatcagc 32827211 Score = 46.1 bits (23), Expect = 0.072 Identities = 41/47 (87%) Strand = Plus / Plus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||| ||||| ||||||||||||| ||||||||||||| Sbjct: 27727009 gccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaa 27727055 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 gctggtggcgctgctctccgtgct 128 |||||||||||||||| ||||||| Sbjct: 559837 gctggtggcgctgctcgccgtgct 559814
>ref|XM_473862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 242 bits (122), Expect = 6e-61 Identities = 173/190 (91%) Strand = Plus / Plus Query: 147 gtgccccgtggacgtgctgaagctggtggcgtgcgtggacgcgctcaacggggtggtgca 206 |||||| |||||| |||||||||| ||||||||||||||||||| |||||| ||||||| Sbjct: 333 gtgcccggtggacacgctgaagctgctggcgtgcgtggacgcgctgaacgggctggtgca 392 Query: 207 cgcggtggtgggcgccaacgccagcgagacctgctgcccgctgctgtccggcgtggccga 266 ||||||||| ||||||| |||| |||| |||||||||||||||||||||||||| ||||| Sbjct: 393 cgcggtggtcggcgccaccgccggcgacacctgctgcccgctgctgtccggcgtcgccga 452 Query: 267 ccccgacgccgcgctctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagcct 326 || ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| Sbjct: 453 cctcgacgccgcgctctgcctctgcaccgccatcaaggccaaggcgctcggcctcagcct 512 Query: 327 cgtgctcccc 336 ||| |||||| Sbjct: 513 cgtcctcccc 522
>dbj|AK062295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F05, full insert sequence Length = 570 Score = 238 bits (120), Expect = 9e-60 Identities = 159/172 (92%) Strand = Plus / Plus Query: 165 gaagctggtggcgtgcgtggacgcgctcaacggggtggtgcacgcggtggtgggcgccaa 224 ||||||| ||||||||||||||||||| |||||| |||||||||||||||| |||||||| Sbjct: 1 gaagctgctggcgtgcgtggacgcgctgaacgggctggtgcacgcggtggtcggcgccaa 60 Query: 225 cgccagcgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctg 284 |||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 ggccagcgacacctgctgcccgctgctgtccggcgtcgccgacctcgacgccgcgctctg 120 Query: 285 cctctgcaccaccatcaaggccaaggcgctcaacgtcagcctcgtgctcccc 336 |||||||||| ||||||||||||||||| || |||||||||||| |||||| Sbjct: 121 cctctgcaccgccatcaaggccaaggcgttcggcgtcagcctcgtcctcccc 172
>gb|U73214.1|TAU73214 Triticum aestivum cold acclimation protein WCOR518 (Wcor518) mRNA, parial cds Length = 1168 Score = 172 bits (87), Expect = 5e-40 Identities = 150/171 (87%) Strand = Plus / Plus Query: 162 gctgaagctggtggcgtgcgtggacgcgctcaacggggtggtgcacgcggtggtgggcgc 221 |||||| ||| ||| ||||||||||| |||||||||| |||||||||||||| | ||| Sbjct: 706 gctgaaactgttggggtgcgtggacgggctcaacgggctggtgcacgcggtgatcggcag 765 Query: 222 caacgccagcgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgct 281 || ||| ||||| | ||||||||||||| | ||||||||||| |||| |||||||||||| Sbjct: 766 cagcgctagcgacagctgctgcccgctgttatccggcgtggctgacctcgacgccgcgct 825 Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagcctcgtgct 332 |||||||||||||||||||||| ||||||||||||| ||| ||||||||| Sbjct: 826 ctgcctctgcaccaccatcaagctcaaggcgctcaacatcaacctcgtgct 876 Score = 107 bits (54), Expect = 2e-20 Identities = 141/170 (82%) Strand = Plus / Plus Query: 163 ctgaagctggtggcgtgcgtggacgcgctcaacggggtggtgcacgcggtggtgggcgcc 222 ||||||||| ||| ||||||||| || ||||||||| | |||||||||||| | ||| | Sbjct: 266 ctgaagctgctggggtgcgtggatgccctcaacgggcttgtgcacgcggtgatcggcagc 325 Query: 223 aacgccagcgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctc 282 | ||||||||| | |||||||| || ||||||||||| ||| || |||||| |||||| Sbjct: 326 agcgccagcgataagtgctgccctttgttgtccggcgtgaccggcctcgacgcagcgctc 385 Query: 283 tgcctctgcaccaccatcaaggccaaggcgctcaacgtcagcctcgtgct 332 ||||| |||||||| ||| || |||||| |||||| ||| ||||||||| Sbjct: 386 tgcctatgcaccacaatcgagctcaaggcactcaacatcaacctcgtgct 435
>dbj|AK062781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-B03, full insert sequence Length = 713 Score = 153 bits (77), Expect = 4e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 236 cctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcacca 295 ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 156 cctgctgcccgctgctgtccggcgtcgccgacctcgacgccgcgctctgcctctgcaccg 215 Query: 296 ccatcaaggccaaggcgctcaacgtcagcctcgtgctcccc 336 |||||||||||||||||||| |||||||||||| |||||| Sbjct: 216 ccatcaaggccaaggcgctcggcgtcagcctcgtcctcccc 256
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.15), mRNA Length = 429 Score = 95.6 bits (48), Expect = 9e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 |||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||| | Sbjct: 264 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 323 Query: 297 catcaaggccaa 308 |||||||||||| Sbjct: 324 catcaaggccaa 335
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 95.6 bits (48), Expect = 9e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 |||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||| | Sbjct: 62001 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 62060 Query: 297 catcaaggccaa 308 |||||||||||| Sbjct: 62061 catcaaggccaa 62072 Score = 71.9 bits (36), Expect = 1e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 ||||||||||||||| ||||| | ||||||| ||||||||| |||||||||||||| | Sbjct: 49847 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 49906 Query: 297 catcaaggccaa 308 | |||||||||| Sbjct: 49907 cgtcaaggccaa 49918 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 ||||||||||||||| ||||| | |||||| |||||||||| |||||||||||||| | Sbjct: 66371 ctgctgcccgctgctcgccggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 66430 Query: 297 catcaaggccaa 308 | | |||||||| Sbjct: 66431 cgtgaaggccaa 66442 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 34110 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 34169 Query: 291 caccaccatcaaggccaa 308 |||| ||||||||||||| Sbjct: 34170 caccgccatcaaggccaa 34187 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 27396 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 27455 Query: 291 caccaccatcaaggccaa 308 |||| ||||||||||||| Sbjct: 27456 caccgccatcaaggccaa 27473 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||||||||| |||||||||||||| || |||||||||| Sbjct: 57280 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 57326 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||||||||| |||||||||||||| || |||||||||| Sbjct: 53987 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 54033 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 30664 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 30723 Query: 291 caccaccatcaaggccaa 308 |||| || |||||||||| Sbjct: 30724 caccgccgtcaaggccaa 30741
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 95.6 bits (48), Expect = 9e-17 Identities = 66/72 (91%) Strand = Plus / Minus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 |||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||| | Sbjct: 21143705 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 21143646 Query: 297 catcaaggccaa 308 |||||||||||| Sbjct: 21143645 catcaaggccaa 21143634 Score = 71.9 bits (36), Expect = 1e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 ||||||||||||||| ||||| | ||||||| ||||||||| |||||||||||||| | Sbjct: 21155859 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 21155800 Query: 297 catcaaggccaa 308 | |||||||||| Sbjct: 21155799 cgtcaaggccaa 21155788 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 ||||||||||||||| ||||| | |||||| |||||||||| |||||||||||||| | Sbjct: 21139335 ctgctgcccgctgctcgccggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 21139276 Query: 297 catcaaggccaa 308 | | |||||||| Sbjct: 21139275 cgtgaaggccaa 21139264 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 21178310 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 21178251 Query: 291 caccaccatcaaggccaa 308 |||| ||||||||||||| Sbjct: 21178250 caccgccatcaaggccaa 21178233 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 21171596 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 21171537 Query: 291 caccaccatcaaggccaa 308 |||| ||||||||||||| Sbjct: 21171536 caccgccatcaaggccaa 21171519 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcacc 294 ||||||||||||||| |||| | ||||||| ||||||||| |||||||||||||| Sbjct: 10072390 tgctgcccgctgctggccggtatcgccgacctcgacgccgccgtctgcctctgcacc 10072334 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||||||||| |||||||||||||| || |||||||||| Sbjct: 21151719 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 21151673 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||||||||| |||||||||||||| || |||||||||| Sbjct: 21148426 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 21148380 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 21175042 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 21174983 Query: 291 caccaccatcaaggccaa 308 |||| || |||||||||| Sbjct: 21174982 caccgccgtcaaggccaa 21174965 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 254 ccggcgtggccgaccccgacgccgc 278 |||||||||||||| |||||||||| Sbjct: 18465706 ccggcgtggccgacgccgacgccgc 18465682
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full insert sequence Length = 769 Score = 95.6 bits (48), Expect = 9e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 |||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||| | Sbjct: 343 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 402 Query: 297 catcaaggccaa 308 |||||||||||| Sbjct: 403 catcaaggccaa 414
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 95.6 bits (48), Expect = 9e-17 Identities = 66/72 (91%) Strand = Plus / Minus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 |||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||| | Sbjct: 21154969 ctgctgcccgctgctgtccggcctagccgacctcgacgccgccgtctgcctctgcaccgc 21154910 Query: 297 catcaaggccaa 308 |||||||||||| Sbjct: 21154909 catcaaggccaa 21154898 Score = 71.9 bits (36), Expect = 1e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 ||||||||||||||| ||||| | ||||||| ||||||||| |||||||||||||| | Sbjct: 21167123 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 21167064 Query: 297 catcaaggccaa 308 | |||||||||| Sbjct: 21167063 cgtcaaggccaa 21167052 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 ||||||||||||||| ||||| | |||||| |||||||||| |||||||||||||| | Sbjct: 21150599 ctgctgcccgctgctcgccggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 21150540 Query: 297 catcaaggccaa 308 | | |||||||| Sbjct: 21150539 cgtgaaggccaa 21150528 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 21189574 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 21189515 Query: 291 caccaccatcaaggccaa 308 |||| ||||||||||||| Sbjct: 21189514 caccgccatcaaggccaa 21189497 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 21182860 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 21182801 Query: 291 caccaccatcaaggccaa 308 |||| ||||||||||||| Sbjct: 21182800 caccgccatcaaggccaa 21182783 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcacc 294 ||||||||||||||| |||| | ||||||| ||||||||| |||||||||||||| Sbjct: 10078429 tgctgcccgctgctggccggtatcgccgacctcgacgccgccgtctgcctctgcacc 10078373 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||||||||| |||||||||||||| || |||||||||| Sbjct: 21162983 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 21162937 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||||||||| |||||||||||||| || |||||||||| Sbjct: 21159690 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 21159644 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Minus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 21186306 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 21186247 Query: 291 caccaccatcaaggccaa 308 |||| || |||||||||| Sbjct: 21186246 caccgccgtcaaggccaa 21186229 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 254 ccggcgtggccgaccccgacgccgc 278 |||||||||||||| |||||||||| Sbjct: 18475759 ccggcgtggccgacgccgacgccgc 18475735
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.11), mRNA Length = 411 Score = 71.9 bits (36), Expect = 1e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 ||||||||||||||| ||||| | ||||||| ||||||||| |||||||||||||| | Sbjct: 249 ctgctgcccgctgctctccgggctcgccgacctcgacgccgccgtctgcctctgcaccgc 308 Query: 297 catcaaggccaa 308 | |||||||||| Sbjct: 309 cgtcaaggccaa 320
>ref|NM_190601.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 193 aacggggtggtgcacgcggtggtgggcgccaacgccagcgagacctgctgcccgctgctg 252 |||||| |||||||| |||| || ||| |||| |||||||| || ||||||||||||||| Sbjct: 7 aacgggctggtgcacacggtagtcggcaccaaggccagcgacacatgctgcccgctgctg 66 Query: 253 tccggcgt 260 |||||||| Sbjct: 67 tccggcgt 74
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 193 aacggggtggtgcacgcggtggtgggcgccaacgccagcgagacctgctgcccgctgctg 252 |||||| |||||||| |||| || ||| |||| |||||||| || ||||||||||||||| Sbjct: 36416726 aacgggctggtgcacacggtagtcggcaccaaggccagcgacacatgctgcccgctgctg 36416667 Query: 253 tccggcgt 260 |||||||| Sbjct: 36416666 tccggcgt 36416659 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 cgctcgtgctggtggcgctgc 118 ||||||||||||||||||||| Sbjct: 10933775 cgctcgtgctggtggcgctgc 10933755 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ctcgtgctggtggcgctgct 119 |||||||||||||||||||| Sbjct: 8521941 ctcgtgctggtggcgctgct 8521960 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggccgaccccgacgccgcgc 280 |||||||||||||||||||| Sbjct: 1575278 ggccgaccccgacgccgcgc 1575259
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 193 aacggggtggtgcacgcggtggtgggcgccaacgccagcgagacctgctgcccgctgctg 252 |||||| |||||||| |||| || ||| |||| |||||||| || ||||||||||||||| Sbjct: 68565 aacgggctggtgcacacggtagtcggcaccaaggccagcgacacatgctgcccgctgctg 68506 Query: 253 tccggcgt 260 |||||||| Sbjct: 68505 tccggcgt 68498
>ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA Length = 992 Score = 69.9 bits (35), Expect = 5e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccacc 297 |||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| Sbjct: 599 tgctgcccgctggtgcagggcgtggcggacctggacgccgcgctctgcctctgcaccacc 658 Query: 298 atc 300 ||| Sbjct: 659 atc 661
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 69.9 bits (35), Expect = 5e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccacc 297 |||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| Sbjct: 3455206 tgctgcccgctggtgcagggcgtggcggacctggacgccgcgctctgcctctgcaccacc 3455147 Query: 298 atc 300 ||| Sbjct: 3455146 atc 3455144 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 cgtggccgaccccgacgccg 277 |||||||||||||||||||| Sbjct: 5201916 cgtggccgaccccgacgccg 5201897
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 69.9 bits (35), Expect = 5e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccacc 297 |||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| Sbjct: 71910 tgctgcccgctggtgcagggcgtggcggacctggacgccgcgctctgcctctgcaccacc 71851 Query: 298 atc 300 ||| Sbjct: 71850 atc 71848
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 69.9 bits (35), Expect = 5e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccacc 297 |||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| Sbjct: 146760 tgctgcccgctggtgcagggcgtggcggacctggacgccgcgctctgcctctgcaccacc 146701 Query: 298 atc 300 ||| Sbjct: 146700 atc 146698
>dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033134F12, full insert sequence Length = 1013 Score = 69.9 bits (35), Expect = 5e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccacc 297 |||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| Sbjct: 599 tgctgcccgctggtgcagggcgtggcggacctggacgccgcgctctgcctctgcaccacc 658 Query: 298 atc 300 ||| Sbjct: 659 atc 661
>dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033M04, full insert sequence Length = 992 Score = 69.9 bits (35), Expect = 5e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccacc 297 |||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| Sbjct: 599 tgctgcccgctggtgcagggcgtggcggacctggacgccgcgctctgcctctgcaccacc 658 Query: 298 atc 300 ||| Sbjct: 659 atc 661
>dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E12, full insert sequence Length = 1384 Score = 69.9 bits (35), Expect = 5e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccacc 297 |||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| Sbjct: 1016 tgctgcccgctggtgcagggcgtggcggacctggacgccgcgctctgcctctgcaccacc 1075 Query: 298 atc 300 ||| Sbjct: 1076 atc 1078
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 ||||||||||||||| ||||| | |||||| |||||||||| |||||||||||||| | Sbjct: 279 ctgctgcccgctgctcgccggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 338 Query: 297 catcaaggccaa 308 | | |||||||| Sbjct: 339 cgtgaaggccaa 350
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 ||||||||||||||| ||||| | |||||| |||||||||| |||||||||||||| | Sbjct: 1935 ctgctgcccgctgctcgccggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 1994 Query: 297 catcaaggccaa 308 | | |||||||| Sbjct: 1995 cgtgaaggccaa 2006
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 237 ctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccac 296 ||||||||||||||| ||||| | |||||| |||||||||| |||||||||||||| | Sbjct: 323 ctgctgcccgctgctcgccggcctcgccgacgccgacgccgccgtctgcctctgcaccgc 382 Query: 297 catcaaggccaa 308 | | |||||||| Sbjct: 383 cgtgaaggccaa 394
>ref|NM_197681.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.6), mRNA Length = 399 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 225 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 284 Query: 291 caccaccatcaaggccaa 308 |||| ||||||||||||| Sbjct: 285 caccgccatcaaggccaa 302
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 231 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 290 Query: 291 caccaccatcaaggccaa 308 |||| ||||||||||||| Sbjct: 291 caccgccatcaaggccaa 308
>dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B09, full insert sequence Length = 702 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 294 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 353 Query: 291 caccaccatcaaggccaa 308 |||| ||||||||||||| Sbjct: 354 caccgccatcaaggccaa 371
>ref|NM_195931.1| Oryza sativa (japonica cultivar-group) putative lipid tranfer protein (OSJNAb0078C13.15), mRNA Length = 381 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcacc 294 ||||||||||||||| |||| | ||||||| ||||||||| |||||||||||||| Sbjct: 217 tgctgcccgctgctggccggtatcgccgacctcgacgccgccgtctgcctctgcacc 273
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 189806 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 189850 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 187102 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 187146
>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP1) mRNA, complete cds Length = 772 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 396 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 440
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 26873 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 26917 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 24169 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 24213
>gb|AC123594.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0078C13, complete sequence Length = 146538 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcacc 294 ||||||||||||||| |||| | ||||||| ||||||||| |||||||||||||| Sbjct: 89149 tgctgcccgctgctggccggtatcgccgacctcgacgccgccgtctgcctctgcacc 89093
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 123806 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 123850 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 121102 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 121146
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 189806 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 189850 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 187102 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 187146
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 75552 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 75508 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 72848 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 72804
>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full insert sequence Length = 780 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 417 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 461
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 351 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 395
>dbj|AK062848.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-H12, full insert sequence Length = 662 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcacc 294 ||||||||||||||| |||| | ||||||| ||||||||| |||||||||||||| Sbjct: 279 tgctgcccgctgctggccggtatcgccgacctcgacgccgccgtctgcctctgcacc 335
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 264 cgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 378 cgacctcgacgccgccgtctgcctctgcaccgccatcaaggccaa 422
>ref|XM_474092.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagc 324 ||||||||||||| ||||||||||||||| |||| || ||||| Sbjct: 666 ctgcctctgcaccgccatcaaggccaaggtgctcgacatcagc 708
>ref|NM_197675.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.12), mRNA Length = 396 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||||||||| |||||||||||||| || |||||||||| Sbjct: 259 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 305
>ref|NM_197674.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.13), mRNA Length = 396 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||||||||| |||||||||||||| || |||||||||| Sbjct: 259 gccgacctcgacgccgccgtctgcctctgcaccgccgtcaaggccaa 305
>dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full insert sequence Length = 1255 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagc 324 ||||||||||||| ||||||||||||||| |||| || ||||| Sbjct: 816 ctgcctctgcaccgccatcaaggccaaggtgctcgacatcagc 858
>dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F10, full insert sequence Length = 1242 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagc 324 ||||||||||||| ||||||||||||||| |||| || ||||| Sbjct: 816 ctgcctctgcaccgccatcaaggccaaggtgctcgacatcagc 858
>dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H11, full insert sequence Length = 1251 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagc 324 ||||||||||||| ||||||||||||||| |||| || ||||| Sbjct: 812 ctgcctctgcaccgccatcaaggccaaggtgctcgacatcagc 854
>dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H13, full insert sequence Length = 1272 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagc 324 ||||||||||||| ||||||||||||||| |||| || ||||| Sbjct: 820 ctgcctctgcaccgccatcaaggccaaggtgctcgacatcagc 862
>dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F03, full insert sequence Length = 1257 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagc 324 ||||||||||||| ||||||||||||||| |||| || ||||| Sbjct: 818 ctgcctctgcaccgccatcaaggccaaggtgctcgacatcagc 860
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagc 324 ||||||||||||| ||||||||||||||| |||| || ||||| Sbjct: 22488 ctgcctctgcaccgccatcaaggccaaggtgctcgacatcagc 22446
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 282 ctgcctctgcaccaccatcaaggccaaggcgctcaacgtcagc 324 ||||||||||||| ||||||||||||||| |||| || ||||| Sbjct: 89539 ctgcctctgcaccgccatcaaggccaaggtgctcgacatcagc 89497
>ref|NM_197680.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.7), mRNA Length = 375 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 201 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 260 Query: 291 caccaccatcaaggccaa 308 |||| || |||||||||| Sbjct: 261 caccgccgtcaaggccaa 278
>dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A12, full insert sequence Length = 627 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 231 cgagacctgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctg 290 |||| |||||||| ||||||| |||| | | ||||| ||||||||| |||||||||| Sbjct: 286 cgagccctgctgctcgctgctcgacggcctcgtcgacctcgacgccgccgtctgcctctg 345 Query: 291 caccaccatcaaggccaa 308 |||| || |||||||||| Sbjct: 346 caccgccgtcaaggccaa 363
>emb|Z12103.1|ZMDELINM Z.mays mRNA that delineates a novel subset of cortical cells Length = 594 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 265 gaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 |||| ||||||||| | |||||||||||| ||||||||||||| Sbjct: 270 gacctcgacgccgcattgtgcctctgcaccgccatcaaggccaa 313
>gb|AY104687.1| Zea mays PCO121733 mRNA sequence Length = 680 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 265 gaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 |||| ||||||||| | |||||||||||| ||||||||||||| Sbjct: 332 gacctcgacgccgcattgtgcctctgcaccgccatcaaggccaa 375
>gb|AF001634.1|AF001634 Zea mays physical impedance induced protein (IIG1) mRNA, complete cds Length = 677 Score = 48.1 bits (24), Expect = 0.018 Identities = 39/44 (88%) Strand = Plus / Plus Query: 265 gaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 |||| ||||||||| | |||||||||||| ||||||||||||| Sbjct: 345 gacctcgacgccgcattgtgcctctgcaccgccatcaaggccaa 388
>ref|XM_473450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 414 Score = 46.1 bits (23), Expect = 0.072 Identities = 41/47 (87%) Strand = Plus / Plus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||| ||||| ||||||||||||| ||||||||||||| Sbjct: 274 gccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaa 320
>gb|BT017960.1| Zea mays clone EL01N0523B04.c mRNA sequence Length = 1282 Score = 46.1 bits (23), Expect = 0.072 Identities = 53/63 (84%) Strand = Plus / Plus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccacc 297 |||||||||||| || || ||||| |||| ||||| ||||| ||||||||||||||| Sbjct: 727 tgctgcccgctggtgcaaggggtggcggacctggacgcggcgctgtgcctctgcaccacc 786 Query: 298 atc 300 ||| Sbjct: 787 atc 789
>emb|X60432.1|ZMPRP Z.mays PRP gene Length = 1402 Score = 46.1 bits (23), Expect = 0.072 Identities = 53/63 (84%) Strand = Plus / Plus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccacc 297 |||||||||||| || || ||||| |||| ||||| ||||| ||||||||||||||| Sbjct: 853 tgctgcccgctggtgcagggggtggcggacctggacgcggcgctgtgcctctgcaccacc 912 Query: 298 atc 300 ||| Sbjct: 913 atc 915
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 46.1 bits (23), Expect = 0.072 Identities = 23/23 (100%) Strand = Plus / Minus Query: 214 gtgggcgccaacgccagcgagac 236 ||||||||||||||||||||||| Sbjct: 1252757 gtgggcgccaacgccagcgagac 1252735 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gctggtggcgctgctctccg 124 |||||||||||||||||||| Sbjct: 85477 gctggtggcgctgctctccg 85496
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 46.1 bits (23), Expect = 0.072 Identities = 41/47 (87%) Strand = Plus / Plus Query: 262 gccgaccccgacgccgcgctctgcctctgcaccaccatcaaggccaa 308 ||||||| ||| ||||| ||||||||||||| ||||||||||||| Sbjct: 157635 gccgacctcgaggccgccgtctgcctctgcacggccatcaaggccaa 157681
>gb|AY105001.1| Zea mays PCO123892 mRNA sequence Length = 1144 Score = 46.1 bits (23), Expect = 0.072 Identities = 53/63 (84%) Strand = Plus / Plus Query: 238 tgctgcccgctgctgtccggcgtggccgaccccgacgccgcgctctgcctctgcaccacc 297 |||||||||||| || || ||||| |||| ||||| ||||| ||||||||||||||| Sbjct: 514 tgctgcccgctggtgcagggggtggcggacctggacgcggcgctgtgcctctgcaccacc 573 Query: 298 atc 300 ||| Sbjct: 574 atc 576
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Minus Query: 102 cgtgctggtggcgctgctctcc 123 |||||||||||||||||||||| Sbjct: 1643481 cgtgctggtggcgctgctctcc 1643460
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 208 gcggtggtgggcgccaacgccagcga 233 ||||||| |||||||||||||||||| Sbjct: 627562 gcggtggcgggcgccaacgccagcga 627587
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 gctcgtgctggtggcgctgctc 120 |||||||||||||||||||||| Sbjct: 13280 gctcgtgctggtggcgctgctc 13301
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 292 accaccatcaaggccaaggcgctcaacgtc 321 |||||||| | ||||||||||||||||||| Sbjct: 155739 accaccatgatggccaaggcgctcaacgtc 155768
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 gctcgtgctggtggcgctgctc 120 |||||||||||||||||||||| Sbjct: 270060 gctcgtgctggtggcgctgctc 270081
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 292 accaccatcaaggccaaggcgctcaacgtc 321 |||||||| | ||||||||||||||||||| Sbjct: 268184 accaccatgatggccaaggcgctcaacgtc 268213
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 gctcgtgctggtggcgctgctc 120 |||||||||||||||||||||| Sbjct: 203717 gctcgtgctggtggcgctgctc 203738
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 44.1 bits (22), Expect = 0.28 Identities = 28/30 (93%) Strand = Plus / Plus Query: 292 accaccatcaaggccaaggcgctcaacgtc 321 |||||||| | ||||||||||||||||||| Sbjct: 143013 accaccatgatggccaaggcgctcaacgtc 143042
>gb|AY105236.1| Zea mays PCO121732 mRNA sequence Length = 763 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 283 tgcctctgcaccaccatcaaggccaa 308 |||||||||||| ||||||||||||| Sbjct: 356 tgcctctgcaccgccatcaaggccaa 381
>ref|NM_197179.1| Oryza sativa (japonica cultivar-group) putative prolyl 4-hydroxylase, alpha subunit (OSJNBa0017E08.15), mRNA Length = 1032 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 254 ccggcgtggccgaccccgacgccgc 278 |||||||||||||| |||||||||| Sbjct: 233 ccggcgtggccgacgccgacgccgc 209
>ref|NM_183669.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 cgctcgtgctggtggcgctgc 118 ||||||||||||||||||||| Sbjct: 712 cgctcgtgctggtggcgctgc 692
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 126 gctggccgcgccgtcgtcggc 146 ||||||||||||||||||||| Sbjct: 15015 gctggccgcgccgtcgtcggc 15035
>gb|AY459337.1| Oryza sativa (japonica cultivar-group) clone CL003615.3 R2R3-MYB gene region Length = 42296 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 cgctcgtgctggtggcgctgc 118 ||||||||||||||||||||| Sbjct: 8578 cgctcgtgctggtggcgctgc 8598
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 96 gccgctcgtgctggtggcgctgctc 120 |||| |||||||||||||||||||| Sbjct: 3685255 gccgttcgtgctggtggcgctgctc 3685231
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 tccgtgctggccgcgccgtcgtcgg 145 ||||||| ||||||||||||||||| Sbjct: 269375 tccgtgcgggccgcgccgtcgtcgg 269399
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 254 ccggcgtggccgaccccgacgccgc 278 |||||||||||||| |||||||||| Sbjct: 40987 ccggcgtggccgacgccgacgccgc 41011
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 cgctcgtgctggtggcgctgc 118 ||||||||||||||||||||| Sbjct: 120791 cgctcgtgctggtggcgctgc 120771
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487H02 Length = 145491 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 cgctcgtgctggtggcgctgc 118 ||||||||||||||||||||| Sbjct: 36617 cgctcgtgctggtggcgctgc 36597
>dbj|AK120584.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136I05, full insert sequence Length = 1373 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 254 ccggcgtggccgaccccgacgccgc 278 |||||||||||||| |||||||||| Sbjct: 326 ccggcgtggccgacgccgacgccgc 302
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 gcggtggtgggcgccaacgcc 228 ||||||||||||||||||||| Sbjct: 2245380 gcggtggtgggcgccaacgcc 2245360
>gb|AY106116.1| Zea mays PCO091367 mRNA sequence Length = 842 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 tgccccgtggacgtgctgaagctgg 172 ||||||||||||| ||||||||||| Sbjct: 317 tgccccgtggacgcgctgaagctgg 341
>gb|AY105945.1| Zea mays PCO115682 mRNA sequence Length = 947 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 283 tgcctctgcaccaccatcaaggccaaggcgctc 315 ||||| |||||| ||||||||||||||| |||| Sbjct: 534 tgcctttgcaccgccatcaaggccaaggtgctc 566
>gb|AY105889.1| Zea mays PCO106909 mRNA sequence Length = 1420 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 283 tgcctctgcaccaccatcaag 303 ||||||||||||||||||||| Sbjct: 843 tgcctctgcaccaccatcaag 863
>gb|BC109230.1| Homo sapiens LIM homeobox 5, mRNA (cDNA clone MGC:129689 IMAGE:40010942), complete cds Length = 1488 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 595 gcaccaccatcaaggccaag 614
>gb|AY387687.1| Triticum aestivum harpin binding protein 1 (HrBP1-2) mRNA, complete cds Length = 1205 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tggccgcgccgtcgtcggcg 147 |||||||||||||||||||| Sbjct: 315 tggccgcgccgtcgtcggcg 334
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 164 tgaagctggtggcgtgcgtggacgcgct 191 ||||||||||||| |||||||| ||||| Sbjct: 1282777 tgaagctggtggcctgcgtggaagcgct 1282804
>ref|NM_187907.1| Oryza sativa (japonica cultivar-group), Ozsa8349 predicted mRNA Length = 1365 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ctcgtgctggtggcgctgct 119 |||||||||||||||||||| Sbjct: 1220 ctcgtgctggtggcgctgct 1201
>ref|NM_184213.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2244 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ggccgaccccgacgccgcgc 280 |||||||||||||||||||| Sbjct: 320 ggccgaccccgacgccgcgc 339
>ref|XM_471003.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 981 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 gctggtggcgctgctctccgtgct 128 |||||||||||||||| ||||||| Sbjct: 816 gctggtggcgctgctcgccgtgct 839
>ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 757 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 tctgcctctgcaccaccatcaaggccaa 308 |||| ||||||||| ||||||||||||| Sbjct: 349 tctgtctctgcaccgccatcaaggccaa 376
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 cgtggccgaccccgacgccgcgct 281 |||||||||| ||||||||||||| Sbjct: 721891 cgtggccgacaccgacgccgcgct 721868
>ref|XM_868793.1| PREDICTED: Bos taurus similar to LIM homeobox protein 1 (LOC616699), mRNA Length = 1441 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 702 gcaccaccatcaaggccaag 721
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence Length = 152414 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 59574 gcaccaccatcaaggccaag 59555
>gb|AY307984.1| Ambystoma mexicanum LIM homeobox gene protein 1 mRNA, partial cds Length = 306 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 281 gcaccaccatcaaggccaag 300
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 gcgccaacgccagcgagacc 237 |||||||||||||||||||| Sbjct: 4267803 gcgccaacgccagcgagacc 4267784
>gb|AC155074.12| Mus musculus chromosome 15, clone RP24-127H11, complete sequence Length = 184795 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 gctctgcctctgcaccacca 298 |||||||||||||||||||| Sbjct: 41195 gctctgcctctgcaccacca 41176
>emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H06, complete sequence Length = 143730 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 gctggtggcgctgctctccgtgct 128 |||||||||||||||| ||||||| Sbjct: 90804 gctggtggcgctgctcgccgtgct 90781
>gb|AC009773.27| Homo sapiens 12 BAC RP11-82C23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 130027 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 89450 gcaccaccatcaaggccaag 89469
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 cgtggccgaccccgacgccgcgct 281 |||||||||| ||||||||||||| Sbjct: 777426 cgtggccgacaccgacgccgcgct 777403
>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0711E10 Length = 157903 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ctcgtgctggtggcgctgct 119 |||||||||||||||||||| Sbjct: 97094 ctcgtgctggtggcgctgct 97113
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 ggcgccaacgccagcgagac 236 |||||||||||||||||||| Sbjct: 97921 ggcgccaacgccagcgagac 97902
>ref|NM_008499.2| Mus musculus LIM homeobox protein 5 (Lhx5), mRNA Length = 2718 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 933 gcaccaccatcaaggccaag 952
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 ggcccgcattgcgccgctcg 103 |||||||||||||||||||| Sbjct: 3759552 ggcccgcattgcgccgctcg 3759533
>dbj|AK140208.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230345I01 product:LIM homeobox protein 5, full insert sequence Length = 1996 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 947 gcaccaccatcaaggccaag 966
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 ccggcgtggccgaccccgacgccg 277 ||||||||||||||||| |||||| Sbjct: 3091501 ccggcgtggccgacccctacgccg 3091524
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence Length = 189102 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ctctgcctctgcaccaccat 299 |||||||||||||||||||| Sbjct: 93232 ctctgcctctgcaccaccat 93251
>gb|U61155.1|MMU61155 Mus musculus LIM/homeodomain protein (Lhx5) mRNA, complete cds Length = 2626 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 1062 gcaccaccatcaaggccaag 1081
>dbj|AK048778.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230062O17 product:LIM/HOMEOBOX PROTEIN LHX5 (HOMEOBOX PROTEIN LIM-2) homolog [Mus musculus], full insert sequence Length = 2619 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 935 gcaccaccatcaaggccaag 954
>dbj|AK033927.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330117N18 product:LIM homeobox protein 5, full insert sequence Length = 2718 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 933 gcaccaccatcaaggccaag 952
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 tctgcctctgcaccaccatcaaggccaa 308 |||| ||||||||| ||||||||||||| Sbjct: 26833478 tctgtctctgcaccgccatcaaggccaa 26833505
>gb|AF291181.1|AF291181 Homo sapiens LHX5 protein mRNA, complete cds Length = 2082 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 1125 gcaccaccatcaaggccaag 1144
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ctcgtgctggtggcgctgct 119 |||||||||||||||||||| Sbjct: 136896 ctcgtgctggtggcgctgct 136915
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccgaccccgacgccgcgctc 282 |||||||||||||||||||| Sbjct: 4634235 ccgaccccgacgccgcgctc 4634254 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 gccgaccccgacgccgcgct 281 |||||||||||||||||||| Sbjct: 2022087 gccgaccccgacgccgcgct 2022106
>dbj|AP002538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408F06 Length = 137462 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggccgaccccgacgccgcgc 280 |||||||||||||||||||| Sbjct: 12509 ggccgaccccgacgccgcgc 12490
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 cgtggccgaccccgacgccg 277 |||||||||||||||||||| Sbjct: 68638 cgtggccgaccccgacgccg 68619
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 tctgcctctgcaccaccatcaaggccaa 308 |||| ||||||||| ||||||||||||| Sbjct: 12021 tctgtctctgcaccgccatcaaggccaa 12048
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 tctgcctctgcaccaccatcaaggccaa 308 |||| ||||||||| ||||||||||||| Sbjct: 99531 tctgtctctgcaccgccatcaaggccaa 99558
>dbj|AK121214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089M05, full insert sequence Length = 2247 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ggccgaccccgacgccgcgc 280 |||||||||||||||||||| Sbjct: 321 ggccgaccccgacgccgcgc 340
>emb|AJ249181.1|ECH249181 Erwinia chrysanthemi sotB gene for sugar efflux transpoter Length = 2161 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 gcgccgctcgtgctggtggcgctg 117 |||||||| ||||||||||||||| Sbjct: 1713 gcgccgctggtgctggtggcgctg 1736
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 cgtggccgaccccgacgccgcgct 281 |||||||||| ||||||||||||| Sbjct: 5170607 cgtggccgacaccgacgccgcgct 5170630
>gb|BC057585.1| Mus musculus LIM homeobox protein 5, mRNA (cDNA clone MGC:67105 IMAGE:6414270), complete cds Length = 2405 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 834 gcaccaccatcaaggccaag 853
>dbj|AK061191.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-F07, full insert sequence Length = 1346 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 gctggtggcgctgctctccgtgct 128 |||||||||||||||| ||||||| Sbjct: 891 gctggtggcgctgctcgccgtgct 914
>dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F04, full insert sequence Length = 757 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 tctgcctctgcaccaccatcaaggccaa 308 |||| ||||||||| ||||||||||||| Sbjct: 349 tctgtctctgcaccgccatcaaggccaa 376
>gb|AY108363.1| Zea mays PCO069442 mRNA sequence Length = 837 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 tctgcctctgcaccaccatcaaggccaa 308 |||||||||||||| || |||||||||| Sbjct: 348 tctgcctctgcaccgccgtcaaggccaa 375
>gb|AY105149.1| Zea mays PCO087109 mRNA sequence Length = 966 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 tctgcctctgcaccaccatcaaggccaa 308 ||||||||||||| ||||||||||||| Sbjct: 457 tctgcctctgcacggccatcaaggccaa 484
>emb|AL442118.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0201G08, complete sequence Length = 121821 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 gctggtggcgctgctctccgtgct 128 |||||||||||||||| ||||||| Sbjct: 35205 gctggtggcgctgctcgccgtgct 35182
>gb|DQ002012.1| Lampetra fluviatilis LIM/homeobox protein 15 (Lhx15) mRNA, partial cds Length = 329 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 206 gcaccaccatcaaggccaag 225
>gb|DQ013364.1| Rhodotorula glutinis phenylalanine ammonia lyase (PAL) mRNA, partial cds Length = 2188 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 ggccgcgccgtcgtcggcgt 148 |||||||||||||||||||| Sbjct: 1748 ggccgcgccgtcgtcggcgt 1767
>ref|NM_022363.2| Homo sapiens LIM homeobox 5 (LHX5), mRNA Length = 2084 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gcaccaccatcaaggccaag 309 |||||||||||||||||||| Sbjct: 1125 gcaccaccatcaaggccaag 1144
>dbj|AB018588.1| Zea mays ZmGR1b mRNA, complete cds Length = 813 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 tctgcctctgcaccaccatcaaggccaa 308 ||||||||||||| ||||||||||||| Sbjct: 324 tctgcctctgcacggccatcaaggccaa 351
>dbj|AB018587.1| Zea mays ZmGR1a mRNA, complete cds Length = 833 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 281 tctgcctctgcaccaccatcaaggccaa 308 ||||||||||||| ||||||||||||| Sbjct: 327 tctgcctctgcacggccatcaaggccaa 354
>dbj|AB061860.1| Streptomyces griseus orf1, orf2, orf3, dasR, dasA, dasB, dasC, orf8 genes, partial and complete cds Length = 8741 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 gctgctgtccggcgtggccg 265 |||||||||||||||||||| Sbjct: 6570 gctgctgtccggcgtggccg 6589 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,380,147 Number of Sequences: 3902068 Number of extensions: 2380147 Number of successful extensions: 52329 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49823 Number of HSP's gapped (non-prelim): 2506 length of query: 336 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 314 effective length of database: 17,147,199,772 effective search space: 5384220728408 effective search space used: 5384220728408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
