ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet98f11 |
|---|---|
| Clone Library Name | barley_pub |
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 99.4 bits (246), Expect = 2e-21 Identities = 43/51 (84%), Positives = 45/51 (88%) Frame = +2 Query: 245 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 KKSWIPA K F++P WLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI Sbjct: 57 KKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 107
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 99.0 bits (245), Expect = 2e-21 Identities = 43/51 (84%), Positives = 45/51 (88%) Frame = +2 Query: 245 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 KKSWIPA KS ++P WLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI Sbjct: 52 KKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 102
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 95.1 bits (235), Expect = 3e-20 Identities = 40/51 (78%), Positives = 44/51 (86%) Frame = +2 Query: 245 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 KKSWIPA + ++P WLDGSLPGD+GFDPLGLGKDPAFLKWYREAELI Sbjct: 52 KKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELI 102
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 65.9 bits (159), Expect = 2e-11 Identities = 30/52 (57%), Positives = 33/52 (63%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D+ W P P WLDGSLPGDFGFDPLGLG DP LKW +AEL+ Sbjct: 64 DRPLWFPGSTP------PEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELV 109
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 62.8 bits (151), Expect = 2e-10 Identities = 28/52 (53%), Positives = 33/52 (63%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D+ W P P WLDGSLPGDFGFDPLGL DP L+W ++AEL+ Sbjct: 64 DRPLWFPGSTP------PPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELV 109
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 54.7 bits (130), Expect = 5e-08 Identities = 25/35 (71%), Positives = 30/35 (85%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+LDGS PGDFGFD LGLG+ PA L+ Y+E+ELI Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELI 90
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 54.7 bits (130), Expect = 5e-08 Identities = 26/51 (50%), Positives = 32/51 (62%) Frame = +2 Query: 245 KKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 K W+P S P +L GSL GD GFDPLGL +DP LKW+ +AEL+ Sbjct: 54 KGEWLPGLAS------PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELV 98
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 50.4 bits (119), Expect = 1e-06 Identities = 23/59 (38%), Positives = 31/59 (52%) Frame = +2 Query: 200 KPVTRRXXXXXXXXDKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKW 376 K ++ D+ W P I+P WLDGSL GD+GFDP GLGK +L++ Sbjct: 40 KAAPKKSAKKTVTTDRPLWYPGA------ISPDWLDGSLVGDYGFDPFGLGKPAEYLQF 92
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 47.4 bits (111), Expect = 8e-06 Identities = 22/45 (48%), Positives = 28/45 (62%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKW 376 D+ W P KS P +LDGSL GD+GFDP GLGK +L++ Sbjct: 51 DRPLWFPGAKS------PEYLDGSLVGDYGFDPFGLGKPAEYLQF 89
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 46.6 bits (109), Expect = 1e-05 Identities = 21/52 (40%), Positives = 30/52 (57%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D+ W+ F ++ P++L G PGD+G+D GL DP K YRE E+I Sbjct: 43 DRAKWLGPFSTNT----PAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVI 90
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 46.2 bits (108), Expect = 2e-05 Identities = 21/52 (40%), Positives = 30/52 (57%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 ++ W+ + +A P++L G PGD+G+D GL DP K YRE ELI Sbjct: 40 NRAKWLGPYSENA---TPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELI 88
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 45.4 bits (106), Expect = 3e-05 Identities = 19/26 (73%), Positives = 20/26 (76%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFL 370 P WLDGSLPGD GFDPLGL K F+ Sbjct: 59 PEWLDGSLPGDRGFDPLGLSKPSEFV 84
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 43.9 bits (102), Expect = 9e-05 Identities = 21/58 (36%), Positives = 28/58 (48%) Frame = +2 Query: 203 PVTRRXXXXXXXXDKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKW 376 P ++ D+ W P P WLDGS+ GD GFDP GLGK +L++ Sbjct: 42 PPPKKSRQVQDDGDRLVWFPGANP------PEWLDGSMIGDRGFDPFGLGKPAEYLQY 93
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 42.0 bits (97), Expect = 4e-04 Identities = 21/52 (40%), Positives = 31/52 (59%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D++ ++P D I P +L+G + GD+G+DP GLGK P Y+ ELI Sbjct: 66 DRRIFLPDGLLDRSEI-PEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELI 116
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 41.2 bits (95), Expect = 6e-04 Identities = 18/35 (51%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 P +L G PGD+G+D GL DP YRE ELI Sbjct: 51 PEYLTGEFPGDYGWDTAGLSADPQTFARYREIELI 85
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 40.4 bits (93), Expect = 0.001 Identities = 22/66 (33%), Positives = 32/66 (48%) Frame = +2 Query: 200 KPVTRRXXXXXXXXDKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 KP T + D+ ++ F ++ PS+L G PGD+G+D GL DP Sbjct: 41 KPKTVQSSSPWYGPDRVKYLGPFSGES----PSYLTGEFPGDYGWDTAGLSADPETFAKN 96 Query: 380 REAELI 397 RE E+I Sbjct: 97 RELEVI 102
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 40.4 bits (93), Expect = 0.001 Identities = 19/41 (46%), Positives = 23/41 (56%) Frame = +2 Query: 275 DAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D + +P G PGD+G+D GL DP K YRE ELI Sbjct: 67 DLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELI 107
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 40.0 bits (92), Expect = 0.001 Identities = 20/52 (38%), Positives = 29/52 (55%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D+ ++ F +A PS+L G PGD+G+D GL DPA R+ E+I Sbjct: 54 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVI 101
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 40.0 bits (92), Expect = 0.001 Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 6/40 (15%) Frame = +2 Query: 296 SWLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELI 397 S+LDG LPGDFGFDPLGL DP F+ KW E+I Sbjct: 64 SYLDGRLPGDFGFDPLGL-SDPEGTGGFIEPKWLAYGEVI 102
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D+ ++ F +A PS+L G PGD+G+D GL DP RE E+I Sbjct: 55 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D+ ++ F +A PS+L G PGD+G+D GL DP RE E+I Sbjct: 55 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D+ ++ F +A PS+L G PGD+G+D GL DP RE E+I Sbjct: 52 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 99
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 39.7 bits (91), Expect = 0.002 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D+ ++ F +A PS+L G PGD+G+D GL DP RE E+I Sbjct: 54 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 101
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 38.9 bits (89), Expect = 0.003 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 69 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVI 104
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 38.9 bits (89), Expect = 0.003 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 68 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVI 103
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/34 (52%), Positives = 21/34 (61%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 394 PSWL+G GD GFDP GL DP + R AE+ Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEV 45 Score = 34.3 bits (77), Expect = 0.073 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 394 +++ W P + P +L G GD GFDP GL DP + + AE+ Sbjct: 370 ERELWFP------NIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEV 414 Score = 32.7 bits (73), Expect = 0.21 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 394 P+ L G P D GFDPL L DP R AE+ Sbjct: 197 PALLTGEYPADRGFDPLNLAADPDVYARMRVAEV 230
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 28 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 101
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 101
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 65 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVI 100
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 65 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 67 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 101
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 SPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 101
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 38.5 bits (88), Expect = 0.004 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +2 Query: 290 NPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 +PS+L G PGD+G+D GL DP RE E+I Sbjct: 64 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 99
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 38.5 bits (88), Expect = 0.004 Identities = 19/46 (41%), Positives = 23/46 (50%) Frame = +2 Query: 260 PAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 P F PS+L G PGD+G+D GL DP RE E+I Sbjct: 54 PKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 99
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 56 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 90
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 46 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 80
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 100
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 100
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 100
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 100
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 99
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 113
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 113
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 38 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 72
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 62 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 96
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 98
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 64 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 98
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 7 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 41
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 63 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 97
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 101
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 38.1 bits (87), Expect = 0.005 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 100
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 37.7 bits (86), Expect = 0.007 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 75 PSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVI 109
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 37.4 bits (85), Expect = 0.009 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D+ ++ F +A PS+L G P D+G+D GL DP RE E+I Sbjct: 55 DRVKYLGPFSGEA----PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVI 102
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 37.4 bits (85), Expect = 0.009 Identities = 17/35 (48%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL DP RE E+I Sbjct: 65 PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVI 99 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +2 Query: 281 EFINPSWLDGSLPGDFGFDPLGLGKDP 361 E ++P +L GS FDPLGLG DP Sbjct: 182 EVVDPLYLGGS------FDPLGLGDDP 202
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L+G PGD+G+D GL DP R E+I Sbjct: 67 PSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVI 101
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 36.6 bits (83), Expect = 0.015 Identities = 16/35 (45%), Positives = 21/35 (60%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L+G PGD+G+D GL DP R E+I Sbjct: 64 PSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVI 98
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 36.6 bits (83), Expect = 0.015 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = +2 Query: 242 DKKSWIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 D+ ++ F +A PS+L G PGD+G+D L DP RE E+I Sbjct: 55 DRVKYLGPFSGEA----PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVI 102
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 36.6 bits (83), Expect = 0.015 Identities = 18/46 (39%), Positives = 23/46 (50%) Frame = +2 Query: 260 PAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 P F PS+L+G GD+G+D GL DP RE E+I Sbjct: 58 PKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVI 103
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 34.7 bits (78), Expect = 0.056 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D GL P RE E+I Sbjct: 70 PSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVI 104
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 34.7 bits (78), Expect = 0.056 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELI 397 PS+L G PGD+G+D + DP RE E+I Sbjct: 67 PSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVI 101
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 31.6 bits (70), Expect = 0.48 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = +2 Query: 305 DGSLPGDFGFDPLGLG-KDPAFLKWYREAEL 394 +G PGD GFDPLGL DP + +E EL Sbjct: 145 EGYEPGDLGFDPLGLAPSDPDEFRLMQEKEL 175
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +2 Query: 293 PSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 394 P+ L G P D GFDPL + DP R +E+ Sbjct: 169 PAHLTGEYPADRGFDPLSVAADPTVYARMRVSEV 202
>NU3M_BRARE (Q9MIY3) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 394 W+P SD E ++P + GFDPLG + P L+++ A L Sbjct: 24 WLPQMNSDTEKLSPY--------ECGFDPLGSARLPFSLRFFLVAVL 62
>PNKP_HUMAN (Q96T60) Bifunctional polynucleotide phosphatase/kinase| (Polynucleotide kinase-3'-phosphatase) (DNA 5'-kinase/3'-phosphatase) [Includes: Polynucleotide 3'-phosphatase (EC 3.1.3.32) (2'(3')-polynucleotidase); Polynucleotide 5'-hydroxyl-kinase ( Length = 521 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = -3 Query: 394 QLGLPVPLEERRVLAKPQGVEAEVTGERAIEPGRVDELGIAFERGDPRLLVGG 236 Q+ L E R V K GV TG + ++PG LG+ GD LV G Sbjct: 50 QVELVADPETRTVAVKQLGVNPSTTGTQELKPGLEGSLGV----GDTLYLVNG 98
>NU3M_CYPCA (P24974) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 394 W+P DAE ++P + GFDPLG + P L+++ A L Sbjct: 24 WLPQMNPDAEKLSPY--------ECGFDPLGSARLPFSLRFFLVAIL 62
>NU3M_CARAU (O78686) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 394 W+P DAE ++P + GFDPLG + P L+++ A L Sbjct: 24 WLPQMNPDAEKLSPY--------ECGFDPLGSARLPFSLRFFLVAIL 62
>NU3M_ONCTS (P25707) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCNE (P20688) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCMY (P11629) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCMA (Q37108) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCKI (P20687) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCKE (Q35262) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_ONCGO (P20686) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQISPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_SCYCA (O79408) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/42 (30%), Positives = 23/42 (54%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 W+P+ K D E ++P + GFDPLG + P ++++ Sbjct: 24 WLPSLKPDNEKLSPY--------ECGFDPLGSARLPFSMRFF 57
>NU3M_SALTR (O03252) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQITPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_SALSA (Q35929) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWY 379 W+P DAE ++P + GFDPLG + P L+++ Sbjct: 24 WLPQMTPDAEKLSPY--------ECGFDPLGSARLPFSLRFF 57
>NU3M_CROLA (P34192) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 394 W+P DAE ++P + GFDPLG + P ++++ A L Sbjct: 24 WLPQMNPDAEKLSPY--------ECGFDPLGSARLPFSIRFFLVAIL 62
>TIG_PROMM (Q7V991) Trigger factor (TF)| Length = 479 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = -3 Query: 373 LEERRVLAKPQGVEAEVTGERAIEPGRV 290 +EE + AK + V E++GER I+P R+ Sbjct: 384 IEESEISAKVKEVSRELSGERDIDPARL 411
>NU3M_SQUAC (Q9ZZ47) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 394 W+P+ D E ++P + GFDPLG + P L+++ A L Sbjct: 24 WLPSLNPDNEKLSPY--------ECGFDPLGSARLPFSLRFFLVAIL 62
>NU3M_PETMA (Q35540) NADH-ubiquinone oxidoreductase chain 3 (EC 1.6.5.3) (NADH| dehydrogenase subunit 3) Length = 116 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +2 Query: 254 WIPAFKSDAEFINPSWLDGSLPGDFGFDPLGLGKDPAFLKWYREAEL 394 W+P K D+E ++P + GFDP G + P L+++ A L Sbjct: 24 WLPIMKPDSEKLSPY--------ECGFDPQGSARLPFSLRFFLVAIL 62
>RF2_STRCO (Q53915) Peptide chain release factor 2 (RF-2)| Length = 368 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = -3 Query: 376 PLEERRVLAKPQGVEAEVTGERAIEPGRVDELGIAFERGD 257 P +++ +K ++AEV A+ GR+D+LG+ FE + Sbjct: 49 PEAAQKITSKLSHLQAEVRKAEALR-GRIDDLGVLFEMAE 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,753,169 Number of Sequences: 219361 Number of extensions: 443540 Number of successful extensions: 1593 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 1521 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1593 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
