ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet98f08 |
|---|---|
| Clone Library Name | barley_pub |
>FBX18_MOUSE (Q8K2I9) F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1)| Length = 1042 Score = 40.0 bits (92), Expect = 0.003 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = +3 Query: 147 PTENQSASISRLTPDVLHEILLRLPVSSLQ-RLRRTCHQWRGIISDPCFI 293 P + + I RL +VL I LPV L L CH WR II+DP FI Sbjct: 202 PCQEVPSHICRLPSEVLRHIFAFLPVEDLYWNLSLVCHLWREIINDPLFI 251
>FBX18_HUMAN (Q8NFZ0) F-box only protein 18 (EC 3.6.1.-) (F-box DNA helicase 1)| Length = 1043 Score = 38.5 bits (88), Expect = 0.007 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = +3 Query: 147 PTENQSASISRLTPDVLHEILLRLPVSSLQ-RLRRTCHQWRGIISDPCFI 293 P + + I L +VL + LPV L L CH WR IISDP FI Sbjct: 204 PCQEALSHICSLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFI 253
>FXL12_HUMAN (Q9NXK8) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat| protein 12) (F-box protein FBL12) Length = 326 Score = 34.3 bits (77), Expect = 0.14 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +3 Query: 165 ASISRLTPDVLHEILLRLPVSSLQRLRRTCHQWRGIISD 281 A++ L VL EI LPV R+ R CH+W+ ++ D Sbjct: 2 ATLVELPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDD 40
>STP2_HUMAN (Q05952) Nuclear transition protein 2 (TP-2) (TP2)| Length = 138 Score = 33.9 bits (76), Expect = 0.18 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = +2 Query: 137 CRAANR--KSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310 CR ++R +S S Q P + R +SG QS ++P PP RH + HH +P Sbjct: 37 CRQSHRGSRSQSSSQSPASHRNPTGAHSSSGHQS-QSPNTSPPPKRHKKTMNSHHSPMRP 95
>STP2_PONPY (Q9N1A4) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)| Length = 138 Score = 33.5 bits (75), Expect = 0.24 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = +2 Query: 137 CRAANRKSVSKH--QPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310 CR + R S S++ Q P + +SG QS ++P D PP RH + HH +P Sbjct: 42 CRQSQRGSWSQNSSQSPASHHNPTGAHSSSGHQS-QSPNDSPPPKRHKKTMNSHHSPTRP 100
>STP2_PANPA (Q9N1A6) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)| Length = 133 Score = 33.5 bits (75), Expect = 0.24 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = +2 Query: 137 CRAANR--KSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310 CR ++R +S S Q P + R +SG QS ++P PP RH + HH +P Sbjct: 37 CRQSHRGSRSRSSSQSPASHRNPTGAHSSSGHQS-QSPNTSPPPKRHKKTMNSHHSPMRP 95
>STP2_GORGO (Q9N1A5) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)| Length = 133 Score = 32.7 bits (73), Expect = 0.40 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = +2 Query: 137 CRAANR--KSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310 CR ++R +S S Q P + R +SG QS ++P PP RH + HH +P Sbjct: 37 CRQSHRGSRSRSSSQSPASHRNPTGAHSSSGHQS-QSPNTSPPPKRHKKTMNSHHSPRRP 95
>FBSP1_CAEEL (Q18223) F-box/SPRY-domain protein 1 (F-box synaptic protein 1)| Length = 332 Score = 32.3 bits (72), Expect = 0.52 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +3 Query: 168 SISRLTPDVLHEILLRLPVSSLQRLRRTCHQWRGIIS 278 S SRL VL++I LP+ L+ TCH W +S Sbjct: 81 SASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALS 117
>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat| protein 7) (F-box protein FBL6/FBL7) Length = 491 Score = 32.3 bits (72), Expect = 0.52 Identities = 18/49 (36%), Positives = 25/49 (51%) Frame = +3 Query: 138 AEQPTENQSASISRLTPDVLHEILLRLPVSSLQRLRRTCHQWRGIISDP 284 A +P + Q ASI RL + +I LP + L R R C +W + DP Sbjct: 104 ASRPQKEQ-ASIDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDP 151
>FXL12_MOUSE (Q9EPX5) F-box/LRR-repeat protein 12 (F-box and leucine-rich repeat| protein 12) (F-box protein FBL12) Length = 326 Score = 32.0 bits (71), Expect = 0.68 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +3 Query: 186 PD-VLHEILLRLPVSSLQRLRRTCHQWRGIISD 281 PD VL EI LPV R+ R CH+W+ ++ D Sbjct: 8 PDLVLLEIFSYLPVRDRIRISRVCHRWKRLVDD 40
>V2A_TAV (P29035) RNA-directed RNA polymerase 2A (EC 2.7.7.48) (protein 2A)| Length = 828 Score = 32.0 bits (71), Expect = 0.68 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +2 Query: 95 IGDKVLGNGQ*WKRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHN 274 I D ++G G+ K R +S KH+ P TR ++ + S E STE P + Sbjct: 765 ISDLIVGRGKSSKASRRKAVESNGKHRDPSTRDHSKVGTDESKETSTEETTQTEPQGAGS 824 Query: 275 QR 280 Q+ Sbjct: 825 QK 826
>BHLH8_MOUSE (Q9QYC3) Class B basic helix-loop-helix protein 8 (bHLHB8) (Muscle,| intestine and stomach expression 1) (MIST-1) Length = 197 Score = 31.6 bits (70), Expect = 0.89 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +2 Query: 164 SKHQPPHTRRPARDTSPASGEQSTETPQ 247 +K++PP R P +DT GEQ+ + PQ Sbjct: 3 TKNRPPRRRTPMQDTEATPGEQTPDRPQ 30
>STP2_MACMU (Q9N1A3) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)| Length = 137 Score = 31.6 bits (70), Expect = 0.89 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +2 Query: 137 CRAANR--KSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310 CR + R +S S Q P T + +SG QS ++P PP RH + HH +P Sbjct: 42 CRQSQRGSRSRSSSQSPATHQNPTGAHSSSGLQS-QSPNASPPPKRHKKTMNSHHSPTRP 100
>STP2_MACFA (Q8WNV1) Nuclear transition protein 2 (TP-2) (TP2)| Length = 141 Score = 31.2 bits (69), Expect = 1.2 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +2 Query: 137 CRAANR--KSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310 CR + R +S S Q P T + +SG QS ++P PP RH + HH +P Sbjct: 40 CRQSQRGSRSRSSSQSPATHQNPTGAHSSSGCQS-QSPNASPPPKRHKKTMNSHHSPTRP 98
>FBX27_MOUSE (Q6DIA9) F-box only protein 27| Length = 280 Score = 31.2 bits (69), Expect = 1.2 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +3 Query: 144 QPTENQSASISRLTPDVLHEILLRLPVSSL-QRLRRTCHQWRGII 275 +P + +SRL P++L +L +P +L RR C WR ++ Sbjct: 14 EPDPQEVLDLSRLPPELLLLVLSHVPPRTLLMHCRRVCRAWRALV 58
>STP2_PANTR (Q9N1A7) Nuclear transition protein 2 (TP-2) (TP2) (Fragment)| Length = 133 Score = 31.2 bits (69), Expect = 1.2 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +2 Query: 137 CRAAN--RKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQP 310 CR ++ +S S Q P + R +SG QS ++P PP RH + HH +P Sbjct: 37 CRQSHCGSRSRSSSQSPASHRNPTGAHSSSGHQS-QSPNTSPPPKRHKKTMNSHHSPMRP 95
>AGRN_RAT (P25304) Agrin precursor| Length = 1959 Score = 30.0 bits (66), Expect = 2.6 Identities = 16/44 (36%), Positives = 21/44 (47%) Frame = +2 Query: 176 PPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHHGSCQ 307 PP TRRP + A+ TP P + +P LH G+CQ Sbjct: 1196 PPTTRRPP---TTATNMDRPRTPGHQQPSKSCDSQPCLHGGTCQ 1236
>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2| Length = 954 Score = 30.0 bits (66), Expect = 2.6 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +2 Query: 149 NRKSVSKHQPPHTRRPARDTSPASGEQSTETP----QDVPPMARHNQRP 283 N K SK P RRPA ++PAS S TP + P + H Q P Sbjct: 54 NAKGDSK--PVQQRRPAAPSAPASTSSSAPTPAAPARQASPASAHQQAP 100 Score = 29.3 bits (64), Expect = 4.4 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +2 Query: 131 KRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRP 283 +R A + + + P PAR SPAS Q TP P + RP Sbjct: 65 RRPAAPSAPASTSSSAPTPAAPARQASPASAHQQAPTPGAPTPRPQGGARP 115
>NO75_LUPLU (Q06841) Early nodulin 75 protein (N-75) (NGM-75) (Fragment)| Length = 434 Score = 29.3 bits (64), Expect = 4.4 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = +2 Query: 170 HQPPHTRRPARDTSPASGEQSTETPQDVPPMAR---HNQRPLLHH 295 H PPH + P + P E P + PP+ H++ P+ +H Sbjct: 107 HPPPHEKPPIEYSPPHEKPPVHEPPYEKPPLVHPPPHDKPPIEYH 151
>EMS_DROME (P18488) Homeotic protein empty spiracles| Length = 497 Score = 28.9 bits (63), Expect = 5.8 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 13/59 (22%) Frame = +2 Query: 173 QPPHTRRPARDTSPASGEQSTE------TPQDVPPMARHNQRP-------LLHHGSCQP 310 QPPHT P + SP S + S+ +P PP + Q P ++H G P Sbjct: 202 QPPHT--PPKSVSPQSSQPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGP 258
>VGLG_TRTV (P33495) Major surface glycoprotein G (Attachment glycoprotein G)| Length = 391 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = +2 Query: 149 NRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRPLLHH 295 N K+ + +P T +P S +G+ + T + PP + N R +L H Sbjct: 239 NGKTTTDREPGPTNQP---NSTTNGQHNKHTQRMTPPPSHDNTRTILQH 284
>DLGP2_HUMAN (Q9P1A6) Disks large-associated protein 2 (DAP-2)| (SAP90/PSD-95-associated protein 2) (SAPAP2) (PSD-95/SAP90-binding protein 2) (Fragment) Length = 1019 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +2 Query: 128 WKRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETP 244 WK + RK K PP ++P + P + E+S + P Sbjct: 938 WKMMESPERKEERKVPPPIPKKPPKGKFPITREKSLDLP 976
>RYK1_DROME (Q27324) Tyrosine-protein kinase Drl precursor (EC 2.7.10.1)| (Protein derailed) Length = 610 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/38 (36%), Positives = 17/38 (44%) Frame = +2 Query: 170 HQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQRP 283 HQ P +RP SP S + +D PM R N P Sbjct: 201 HQAPEKQRPVVTESPVGRGNSGGSKRDFDPMLRENLVP 238
>PHK_STRAW (Q82NM9) Probable phosphoketolase (EC 4.1.2.-)| Length = 793 Score = 28.5 bits (62), Expect = 7.6 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Frame = +3 Query: 201 EILLRLPVSSLQRLRRTCHQWRGIIS-----DPCFIMDHANRAPEHLLLFLP 341 E+ R P++SL L T H WR + DP F+ N++PE + ++LP Sbjct: 513 ELAWRAPIASLNYLL-TSHVWRQDHNGFSHQDPGFVDHVLNKSPEAVRVYLP 563
>XRN1_MOUSE (P97789) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (mXRN1)| (Strand-exchange protein 1 homolog) (Protein Dhm2) Length = 1719 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 140 RAANRKSVSKHQPPHTRR-PARDTSPASGEQSTETPQDVPP 259 R ANRK+ + ++ P + P S E + TPQ+ PP Sbjct: 1626 RVANRKNFENKEAQSSQATPLQTNKPGSSEATKMTPQESPP 1666
>RDRP_PAV (Q9J7Z2) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA| replicase) (Protein A) Length = 973 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +2 Query: 194 PARDTSPASGEQSTETPQDVPPMARHNQR 280 P +T + EQS+ TP+ VP MA H++R Sbjct: 858 PRVETVEPNHEQSSGTPEVVPEMAGHSER 886
>FBX46_HUMAN (Q6PJ61) F-box only protein 46 (F-box only protein 34-like)| Length = 646 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 180 LTPDVLHEILLRLPVSSLQRLRRTCHQWRGII 275 L VL +I LP +L L+ TCH ++GII Sbjct: 476 LPEHVLVKIFSFLPTRALAALKCTCHHFKGII 507
>KCMA1_RAT (Q62976) Calcium-activated potassium channel alpha subunit 1| (Calcium-activated potassium channel, subfamily M, alpha subunit 1) (Maxi K channel) (MaxiK) (BK channel) (K(VCA)alpha) (BKCA alpha) (KCa1.1) (Slowpoke homolog) (Slo homolog) (Slo-alp Length = 1210 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 422 CCDRPFLIEELHAARHGGLEACRGVQPRQEKEEVLRCTVG---MIHDEAGVADYAAPLVA 252 CC +E +G +A ++P EKEEV+ VG + D AGV A L Sbjct: 119 CCHCGGKTKEAQKINNGSSQADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTG 178 Query: 251 R 249 R Sbjct: 179 R 179
>KCMA1_MOUSE (Q08460) Calcium-activated potassium channel alpha subunit 1| (Calcium-activated potassium channel, subfamily M, alpha subunit 1) (Maxi K channel) (MaxiK) (BK channel) (K(VCA)alpha) (BKCA alpha) (KCa1.1) (Slowpoke homolog) (Slo homolog) (Slo-a Length = 1209 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 422 CCDRPFLIEELHAARHGGLEACRGVQPRQEKEEVLRCTVG---MIHDEAGVADYAAPLVA 252 CC +E +G +A ++P EKEEV+ VG + D AGV A L Sbjct: 118 CCHCGGKTKEAQKINNGSSQADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTG 177 Query: 251 R 249 R Sbjct: 178 R 178
>IF2_ZYMMO (Q5NQ27) Translation initiation factor IF-2| Length = 989 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +2 Query: 131 KRCRAANRKSVSKHQPPH-TRRPARDTSPASGEQSTETPQDVPP 259 K +AA K+ + TRRPA+ +P + E+ +E+P+ P Sbjct: 290 KEAKAAQAKTAGAAEGEEKTRRPAKAAAPKAREERSESPRSPAP 333
>KCMA1_PIG (O18866) Calcium-activated potassium channel alpha subunit 1| (Calcium-activated potassium channel, subfamily M, alpha subunit 1) (Maxi K channel) (MaxiK) (BK channel) (K(VCA)alpha) (BKCA alpha) (KCa1.1) (Slowpoke homolog) (Slo homolog) (Slo-alp Length = 1152 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 422 CCDRPFLIEELHAARHGGLEACRGVQPRQEKEEVLRCTVG---MIHDEAGVADYAAPLVA 252 CC +E +G +A ++P EKEEV+ VG + D AGV A L Sbjct: 92 CCHCGGKTKEAQKINNGASQADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTG 151 Query: 251 R 249 R Sbjct: 152 R 152
>BAGS_BOMMO (Q9BLJ6) BAG domain-containing protein Samui| Length = 677 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +2 Query: 149 NRKSVSKHQPPHTRRPARDTSPASGEQSTETPQDVPPMARHNQR 280 NR+ S+ + P + PA T P +T+T Q P + H Q+ Sbjct: 94 NRRFSSRDEQPQQQTPASPTQPQQQTTATQTEQ-TPTHSEHEQQ 136
>FBX46_MOUSE (Q8BG80) F-box only protein 46 (F-box only protein 34-like)| Length = 603 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 Query: 180 LTPDVLHEILLRLPVSSLQRLRRTCHQWRGII 275 L VL +I LP +L L+ TCH ++GII Sbjct: 476 LPEHVLVKIFSFLPTRALAALKCTCHHFKGII 507
>AMEL_CAVPO (Q9Z0K9) Amelogenin precursor| Length = 226 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 2/52 (3%) Frame = +2 Query: 167 KHQPPHTRRPARDTSPASGEQSTETPQD--VPPMARHNQRPLLHHGSCQPCT 316 +H P HT P P Q PQ +P H+ P HH P T Sbjct: 87 QHPPSHTTLPPHHHIPVGPAQQPVVPQQPLMPVPGHHSMTPNQHHQPNLPPT 138
>TOF2_YEAST (Q02208) Topoisomerase 1-associated factor 2| Length = 771 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +2 Query: 224 EQSTETPQDVPPMARHNQRPLLHHGSCQPCT 316 E TPQ V PM ++N+ + H+ S C+ Sbjct: 24 EARLNTPQSVSPMVQYNEDIITHNNSINNCS 54
>MLL3_HUMAN (Q8NEZ4) Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog| (Histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3) (EC 2.1.1.43) (Homologous to ALR protein) Length = 4911 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 Query: 173 QPPHTRRPARDTSPASGEQSTETPQDVPP 259 QPP + P + +PA G S PQ PP Sbjct: 3352 QPPIAQLPIKTCTPAPGTVSNANPQSGPP 3380
>YT32_STRFR (P20185) Hypothetical 32.6 kDa protein in transposon Tn4556| Length = 305 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +2 Query: 131 KRCRAANRKSVSKHQPPHTRRPARDTSPASGEQSTETP 244 +RC A +S PP TR P P+ GE + E P Sbjct: 254 QRCHRAGLRS-----PPRTREPLWSLGPSGGEAAGEAP 286
>ACON_CORJK (Q4JVM4) Aconitate hydratase (EC 4.2.1.3)| Length = 936 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -2 Query: 421 VVTDHFSSKSFTRPGMAVLKLAEASSLGRKRRRCSGAR 308 V TDH S S +PG + +A+ + RK GAR Sbjct: 710 VTTDHISPASTIKPGTPAAQYLDANGVERKDYNSLGAR 747
>VE7_HPV68 (P54668) Protein E7| Length = 110 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Frame = +3 Query: 195 LHEILLRL-PVSSLQRLRRTCHQWRGIISDPCFIMDHANRAPEHLLL 332 + EI+L L P + +Q + CH+ G D DHA +HLLL Sbjct: 8 VQEIVLELCPYNEIQPVDLVCHEQLGDSDDEIDEPDHAVNHHQHLLL 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,544,633 Number of Sequences: 219361 Number of extensions: 1266387 Number of successful extensions: 4779 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 4533 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4773 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
