ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet98f08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF136278.1| Mus musculus rpl30 pseudogene, complete sequence; cathepsin Z (Ctsz) gene, complete cds; and TH1 pseudogene, complete sequence Length = 17566 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 gggcggcttcttcttcttcttc 36 |||||||||||||||||||||| Sbjct: 2193 gggcggcttcttcttcttcttc 2172
>gb|AC132620.3| Mus musculus BAC clone RP23-179A12 from chromosome 6, complete sequence Length = 178174 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 15 gggcggcttcttcttcttcttc 36 |||||||||||||||||||||| Sbjct: 59938 gggcggcttcttcttcttcttc 59917
>ref|NM_120076.2| Arabidopsis thaliana DNA binding / transcription factor AT4G39160 mRNA, complete cds Length = 1806 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 gcttcttcttcttcttcgcct 40 ||||||||||||||||||||| Sbjct: 1604 gcttcttcttcttcttcgcct 1584
>ref|NM_111791.2| Arabidopsis thaliana unknown protein AT3G09570 mRNA, complete cds Length = 1664 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 1362 ggcggcttcttcttcttcttc 1342
>ref|NM_194553.1| Oryza sativa (japonica cultivar-group) putative peroxidase (OSJNBa0015O22.19), mRNA Length = 1011 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 3 ggcggcttcttcttcttcttc 23
>gb|AC105995.9| Mus musculus chromosome 5, clone RP24-168A7, complete sequence Length = 150133 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 58219 ggcggcttcttcttcttcttc 58239
>gb|AC161373.4| Mus musculus BAC clone RP23-308E4 from chromosome 6, complete sequence Length = 189028 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcctg 41 ||||||||||||||||||||| Sbjct: 99533 cttcttcttcttcttcgcctg 99513
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 79069 ggcggcttcttcttcttcttc 79089
>gb|AC140420.4| Mus musculus BAC clone RP24-440F22 from chromosome 5, complete sequence Length = 157377 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 148872 ggcggcttcttcttcttcttc 148892
>gb|AC147678.5| Canis Familiaris, clone XX-25C7, complete sequence Length = 171041 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 38486 ggcggcttcttcttcttcttc 38506
>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04, complete sequence Length = 96328 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 34199 ggcggcttcttcttcttcttc 34219
>gb|AC113262.29| Mus musculus strain 129/Sv clone ct7-518k21 map 5, complete sequence Length = 180394 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 90372 ggcggcttcttcttcttcttc 90352
>gb|AY568661.1| Arabidopsis thaliana At4g39160 (At4g39160) mRNA, complete cds Length = 1806 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 gcttcttcttcttcttcgcct 40 ||||||||||||||||||||| Sbjct: 1604 gcttcttcttcttcttcgcct 1584
>gb|AC110249.10| Mus musculus chromosome 14, clone RP23-257O8, complete sequence Length = 204244 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 2393 ggcggcttcttcttcttcttc 2373
>gb|AC132608.2| Mus musculus BAC clone RP23-451E12 from chromosome 18, complete sequence Length = 201478 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 34586 ggcggcttcttcttcttcttc 34606
>emb|CR974589.6| Mouse DNA sequence from clone RP23-77B14 on chromosome 12, complete sequence Length = 198849 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 61295 ggcggcttcttcttcttcttc 61275
>gb|AC130549.4| Mus musculus BAC clone RP24-456I3 from chromosome 7, complete sequence Length = 160449 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 85225 ggcggcttcttcttcttcttc 85205
>gb|AC121808.2| Mus musculus BAC clone RP23-449M23 from 13, complete sequence Length = 194020 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 121981 ggcggcttcttcttcttcttc 121961
>gb|AC114555.7| Mus musculus chromosome 5, clone RP23-431C18, complete sequence Length = 162394 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 59593 ggcggcttcttcttcttcttc 59573
>gb|DQ132648.1| Arabidopsis thaliana clone 01410 expressed protein (At1g11990) mRNA, complete cds Length = 1963 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 1054 ggcggcttcttcttcttcttc 1074
>gb|DQ132647.1| Arabidopsis thaliana clone 01409 expressed protein (At1g11990) mRNA, complete cds Length = 2184 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 1292 ggcggcttcttcttcttcttc 1312
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 637813 ggcggcttcttcttcttcttc 637793
>emb|AL606805.21| Mouse DNA sequence from clone RP23-449F16 on chromosome 11 Contains the 5' end of the Lpo gene for lactoperoxidase, a novel gene, the Epx gene for eosinophil peroxidase, the Olfr462, Olfr463 and Olfr464 genes for olfactory receptors 462, 463 and 464, a novel gene, a cytochrome c oxidase subunit VIc (Cox6c) pseudogene, a ubiquitin-conjugating enzyme E2B (S. cerevisiae RAD6 homology) (Ube2b) pseudogene and the 3' end of the gene for dynein light chain 2 (6720463E02Rik), complete sequence Length = 184069 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 132243 ggcggcttcttcttcttcttc 132263
>emb|AL606466.12| Mouse DNA sequence from clone RP23-348N2 on chromosome 11 Contains the 5' end of the Ppp3r1 gene for protein phospatase 3 regulatory subunit B alpha isoform (calcineurin B, type I), a ribosomal protein L39 (Rpl39) pseudogene, a novel gene, the Plek gene for pleckstrin, a CUB domain and EGF-like repeat containing (Cegf) protein pseudogene and a CpG island, complete sequence Length = 201805 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 118755 ggcggcttcttcttcttcttc 118775
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 gcttcttcttcttcttcgcct 40 ||||||||||||||||||||| Sbjct: 153604 gcttcttcttcttcttcgcct 153584
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project) Length = 89035 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 gcttcttcttcttcttcgcct 40 ||||||||||||||||||||| Sbjct: 22140 gcttcttcttcttcttcgcct 22120
>emb|AJ544892.1|TNI544892 Tetraodon nigroviridis crfb1 gene, crfb2 gene, crfb3 gene, crfb4 gene, crfb5 gene, crfb6 gene and ORF1 DNA Length = 30094 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 24647 ggcggcttcttcttcttcttc 24667 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcctg 41 ||||||||||||||||||||| Sbjct: 12265 cttcttcttcttcttcgcctg 12245
>gb|AC164315.2| Mus musculus BAC clone RP23-18J12 from chromosome 14, complete sequence Length = 204011 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 57731 ggcggcttcttcttcttcttc 57751
>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0015O22 From Chromosome 10, complete sequence Length = 189349 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 105421 ggcggcttcttcttcttcttc 105401
>emb|AJ630489.1| Arabidopsis thaliana mRNA for hypothetical protein, clone At4g39160 Length = 1806 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 gcttcttcttcttcttcgcct 40 ||||||||||||||||||||| Sbjct: 1604 gcttcttcttcttcttcgcct 1584
>gb|BT006586.1| Arabidopsis thaliana At3g09570 mRNA, complete cds Length = 1320 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 1284 ggcggcttcttcttcttcttc 1264
>dbj|AK088695.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430023N08 product:unclassifiable, full insert sequence Length = 2332 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 2193 ggcggcttcttcttcttcttc 2213
>dbj|AK079309.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630004F09 product:unclassifiable, full insert sequence Length = 3833 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 gcttcttcttcttcttcgcct 40 ||||||||||||||||||||| Sbjct: 655 gcttcttcttcttcttcgcct 675
>gb|AC153905.5| Mus musculus 6 BAC RP23-215A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215955 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 102005 ggcggcttcttcttcttcttc 101985
>gb|BT023441.1| Arabidopsis thaliana At4g39160 gene, complete cds Length = 1871 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 gcttcttcttcttcttcgcct 40 ||||||||||||||||||||| Sbjct: 1640 gcttcttcttcttcttcgcct 1620
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 23063066 ggcggcttcttcttcttcttc 23063086
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 637813 ggcggcttcttcttcttcttc 637793
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 24268463 ggcggcttcttcttcttcttc 24268483 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 2705042 cttcttcttcttcttcgcct 2705061 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 29270 gcggcttcttcttcttcttc 29289
>gb|AC016661.7|AC016661 Arabidopsis thaliana chromosome 3 BAC F11F8 genomic sequence, complete sequence Length = 107603 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 40180 ggcggcttcttcttcttcttc 40160
>emb|BX823641.1|CNS0A5CD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZB11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1536 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 1299 ggcggcttcttcttcttcttc 1279
>emb|BX827901.1|CNS0A2AC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2120 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 gcttcttcttcttcttcgcct 40 ||||||||||||||||||||| Sbjct: 1876 gcttcttcttcttcttcgcct 1856
>gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, complete sequence Length = 186281 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 143536 ggcggcttcttcttcttcttc 143556
>gb|AC155640.5| Mus musculus 10 BAC RP24-87H21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 222712 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 33085 ggcggcttcttcttcttcttc 33105
>gb|AC146064.4| Pan troglodytes BAC clone RP43-59B14 from chromosome 7, complete sequence Length = 186687 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 76774 ggcggcttcttcttcttcttc 76754
>gb|BT002532.1| Arabidopsis thaliana unknown protein (At3g09570) mRNA, complete cds Length = 1550 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 1353 ggcggcttcttcttcttcttc 1333
>gb|AC140397.2| Mus musculus BAC clone RP23-162E7 from chromosome 13, complete sequence Length = 233829 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 119780 ggcggcttcttcttcttcttc 119800
>gb|AY924664.1| Arabidopsis thaliana hypothetical protein (At1g11990) mRNA, complete cds Length = 1032 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 315 ggcggcttcttcttcttcttc 335
>dbj|AK104730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C06, full insert sequence Length = 1447 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 62 ggcggcttcttcttcttcttc 82
>dbj|AK061462.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B11, full insert sequence Length = 1447 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 62 ggcggcttcttcttcttcttc 82
>tpe|BN000654.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx125 gene for class III peroxidase 125 precursor, exons 1-3 Length = 2806 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 3 ggcggcttcttcttcttcttc 23
>gb|AC123676.9| Mus musculus chromosome 1, clone RP23-275F9, complete sequence Length = 169201 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 128016 ggcggcttcttcttcttcttc 128036
>gb|AC079082.39| Mus musculus strain C57BL/6J chromosome 10 clone rp23-161b11, complete sequence Length = 205621 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 187659 ggcggcttcttcttcttcttc 187679
>gb|AC104898.9| Mus musculus chromosome 8, clone RP23-300I4, complete sequence Length = 181370 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 gcttcttcttcttcttcgcct 40 ||||||||||||||||||||| Sbjct: 74748 gcttcttcttcttcttcgcct 74768
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 637810 ggcggcttcttcttcttcttc 637790
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 23372976 ggcggcttcttcttcttcttc 23372996
>emb|AL645602.14| Mouse DNA sequence from clone RP23-79E13 on chromosome 11, complete sequence Length = 240483 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 166460 ggcggcttcttcttcttcttc 166480
>gb|AC104098.5| Mus musculus BAC clone RP24-372H3 from 5, complete sequence Length = 180886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 133494 ggcggcttcttcttcttcttc 133474
>gb|AC141469.4| Mus musculus BAC clone RP24-439P5 from 5, complete sequence Length = 183468 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 45081 ggcggcttcttcttcttcttc 45061
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 67490 ggcggcttcttcttcttcttc 67510
>gb|AC132435.3| Mus musculus BAC clone RP23-223L12 from 10, complete sequence Length = 198383 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 157178 ggcggcttcttcttcttcttc 157198 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 156999 ggcggcttcttcttcttcttc 157019
>gb|AC125046.3| Mus musculus BAC clone RP23-349O22 from 6, complete sequence Length = 223938 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 321 cacctcctccttttcctgcct 341 ||||||||||||||||||||| Sbjct: 60157 cacctcctccttttcctgcct 60137
>emb|AL808026.10| Mouse DNA sequence from clone RP23-200N16 on chromosome X, complete sequence Length = 214016 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 9940 ggcggcttcttcttcttcttc 9920
>emb|AL928813.10| Mouse DNA sequence from clone RP23-325P5 on chromosome 2, complete sequence Length = 151207 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 118963 ggcggcttcttcttcttcttc 118943
>emb|CT025573.9| Mouse DNA sequence from clone RP24-274P18 on chromosome 17, complete sequence Length = 210893 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 88226 ggcggcttcttcttcttcttc 88206
>emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on chromosome 4, complete sequence Length = 240125 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 141552 ggcggcttcttcttcttcttc 141532
>emb|AL731703.16| Mouse DNA sequence from clone RP23-100O16 on chromosome 2, complete sequence Length = 187541 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 ggcggcttcttcttcttcttc 36 ||||||||||||||||||||| Sbjct: 126560 ggcggcttcttcttcttcttc 126540
>ref|NM_147883.1| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/ nucleotide binding AT5G22010 mRNA, complete cds Length = 2989 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 12 cttcttcttcttcttcgcct 31
>ref|NM_147984.1| Arabidopsis thaliana unknown protein AT5G32605 mRNA, complete cds Length = 1098 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 gggcggcttcttcttcttct 34 |||||||||||||||||||| Sbjct: 136 gggcggcttcttcttcttct 117
>ref|NM_148454.1| Arabidopsis thaliana unknown protein AT1G09995 mRNA, complete cds Length = 724 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 33 cttcttcttcttcttcgcct 52
>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence Length = 197907 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 108075 cttcttcttcttcttcgcct 108056
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 catcagccgcctcacaccagacgt 193 ||||||||||||||| |||||||| Sbjct: 331538 catcagccgcctcaccccagacgt 331515
>gb|AC158391.2| Mus musculus BAC clone RP23-441C8 from chromosome 17, complete sequence Length = 203548 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 78556 cttcttcttcttcttcgcct 78537
>ref|XM_471044.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 645 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 547 gcggcttcttcttcttcttc 528
>gb|AC158156.10| Mus musculus chromosome 3, clone RP23-145F12, complete sequence Length = 201984 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 188685 cttcttcttcttcttcgcct 188704
>gb|AC166646.4| Mus musculus chromosome 3, clone RP24-400P18, complete sequence Length = 176864 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 143548 cttcttcttcttcttcgcct 143567
>gb|AY395778.1| Montastraea annularis clone Man-ms2-5 microsatellite sequence Length = 361 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 62 cttcttcttcttcttcgcct 43
>gb|AY022280.1| Oryza sativa microsatellite MRG4605 containing (AAG)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 128 gcggcttcttcttcttcttc 109
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 72532 cttcttcttcttcttcgcct 72513
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 151562 cttcttcttcttcttcgcct 151581
>ref|XM_458875.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D10373g) partial mRNA Length = 4374 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 3772 cttcttcttcttcttcgcct 3753
>ref|XM_953452.1| Neurospora crassa OR74A hypothetical protein (NCU07752.1) partial mRNA Length = 825 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 562 cttcttcttcttcttcgcct 543
>ref|XM_328457.1| Neurospora crassa OR74A hypothetical protein (NCU07752.1) partial mRNA Length = 825 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 562 cttcttcttcttcttcgcct 543
>gb|AC161197.9| Mus musculus chromosome 7, clone RP23-179K11, complete sequence Length = 240657 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 4270 cttcttcttcttcttcgcct 4289
>gb|AC121785.3| Mus musculus BAC clone RP23-382K4 from chromosome 3, complete sequence Length = 197272 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 5530 cttcttcttcttcttcgcct 5549
>ref|XM_714119.1| Candida albicans SC5314 hypothetical protein (CaO19_12977), mRNA Length = 1524 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gcttcttcttcttcttcgcc 39 |||||||||||||||||||| Sbjct: 1184 gcttcttcttcttcttcgcc 1165
>gb|BT013160.1| Lycopersicon esculentum clone 134192F, mRNA sequence Length = 1488 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttctt 35 |||||||||||||||||||| Sbjct: 19 ggcggcttcttcttcttctt 38
>gb|AC162872.9| Mus musculus chromosome 3, clone RP24-346J6, complete sequence Length = 147221 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 54589 cttcttcttcttcttcgcct 54570
>gb|AC154396.11| Mus musculus chromosome 3, clone RP24-254D5, complete sequence Length = 153799 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 118648 cttcttcttcttcttcgcct 118629
>gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosome 17, complete sequence Length = 190724 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 108688 gcggcttcttcttcttcttc 108707
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 35674754 cttcttcttcttcttcgcct 35674735
>gb|AC025723.2| Caenorhabditis elegans cosmid Y54F10AM, complete sequence Length = 77422 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 46288 cttcttcttcttcttcgcct 46307
>gb|AY551921.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS216 mRNA, complete cds Length = 1265 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 195 gcggcttcttcttcttcttc 176
>ref|XR_003038.1| PREDICTED: Mus musculus hypothetical protein LOC670587 (LOC670587), mRNA Length = 780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 537 cttcttcttcttcttcgcct 518
>gb|AC127550.3| Mus musculus BAC clone RP24-535F16 from chromosome 3, complete sequence Length = 187545 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 90382 cttcttcttcttcttcgcct 90363
>gb|AC004122.1| Arabidopsis thaliana chromosome I BAC T27I1 genomic sequence, complete sequence Length = 67878 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 8894 cttcttcttcttcttcgcct 8875
>emb|Z72504.1|CEC29E6 Caenorhabditis elegans Cosmid C29E6, complete sequence Length = 44614 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 15102 cttcttcttcttcttcgcct 15083
>gb|AC123030.4| Mus musculus BAC clone RP24-573I5 from chromosome 7, complete sequence Length = 173971 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 68094 gcggcttcttcttcttcttc 68113
>gb|AC117229.3| Mus musculus BAC clone RP23-380M1 from chromosome 2, complete sequence Length = 187221 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 67880 cttcttcttcttcttcgcct 67899
>gb|AC121125.9| Mus musculus chromosome 5, clone RP23-10F17, complete sequence Length = 264205 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttcttcttcttcttcgcctg 41 |||||||||||||||||||| Sbjct: 162279 ttcttcttcttcttcgcctg 162298
>ref|XM_778178.1| PREDICTED: Strongylocentrotus purpuratus similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed (LOC577982), mRNA Length = 916 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcctgggg 44 |||||||||||||||| ||||||| Sbjct: 329 cttcttcttcttcttctcctgggg 306
>ref|XM_782727.1| PREDICTED: Strongylocentrotus purpuratus similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed (LOC582788), mRNA Length = 330 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcctgggg 44 |||||||||||||||| ||||||| Sbjct: 234 cttcttcttcttcttctcctgggg 211
>ref|XM_967990.1| PREDICTED: Tribolium castaneum similar to Prominin-like protein (LOC661858), mRNA Length = 2841 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 2616 cttcttcttcttcttcgcct 2597
>emb|Z49259.1|SC9582X S.cerevisiae chromosome XIII cosmid 9582 Length = 38661 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgcaactttcataggagaca 104 |||||||||||||||||||| Sbjct: 31284 cgcaactttcataggagaca 31265
>ref|XM_781989.1| PREDICTED: Strongylocentrotus purpuratus similar to Finkel-Biskis-Reilly murine sarcoma virusubiquitously expressed (LOC582012), mRNA Length = 477 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcctgggg 44 |||||||||||||||| ||||||| Sbjct: 329 cttcttcttcttcttctcctgggg 306
>emb|X82362.1|AOHIS2B A.officinalis mRNA for histone 2B Length = 492 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 176 cttcttcttcttcttcgcct 157
>gb|BT023749.1| Drosophila melanogaster RH73753 full insert cDNA Length = 2349 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 1953 gcggcttcttcttcttcttc 1972
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 767148 cttcttcttcttcttcgcct 767167
>gb|AC154715.2| Mus musculus BAC clone RP24-361A22 from chromosome 16, complete sequence Length = 172362 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 15457 cttcttcttcttcttcgcct 15476
>gb|AC004938.3| Homo sapiens PAC clone RP5-971C3 from 7, complete sequence Length = 88029 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ggcggcttcttcttcttctt 35 |||||||||||||||||||| Sbjct: 42494 ggcggcttcttcttcttctt 42513
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 16541 cttcttcttcttcttcgcct 16560
>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03, complete sequence Length = 140948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 66798 gcggcttcttcttcttcttc 66817
>emb|AL589883.1|ATT6G21 Arabidopsis thaliana DNA chromosome 5, BAC clone T6G21 (ESSA project) Length = 149788 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 55057 cttcttcttcttcttcgcct 55038
>gb|AC163892.2| Glomus intraradices clone JGIATSX-5O23, complete sequence Length = 35427 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gcttcttcttcttcttcgcc 39 |||||||||||||||||||| Sbjct: 14900 gcttcttcttcttcttcgcc 14881
>gb|AF067624.1| Caenorhabditis elegans cosmid M01B12, complete sequence Length = 34907 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 13649 gcggcttcttcttcttcttc 13630
>emb|BX649282.8| Zebrafish DNA sequence from clone DKEYP-3F10 in linkage group 11, complete sequence Length = 175316 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gcttcttcttcttcttcgcc 39 |||||||||||||||||||| Sbjct: 122971 gcttcttcttcttcttcgcc 122990
>gb|AC023728.5| Drosophila melanogaster X BAC RP98-6J12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175674 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 154887 gcggcttcttcttcttcttc 154906
>gb|AF324781.1| Pinus taeda clone PtTX4092 microsatellite sequence Length = 174 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 47 cttcttcttcttcttcgcct 28
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 510377 gcggcttcttcttcttcttc 510358
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence Length = 190469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 ggcttcttcttcttcttcgc 38 |||||||||||||||||||| Sbjct: 64141 ggcttcttcttcttcttcgc 64122
>dbj|AK221375.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-37-J06 Length = 751 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 1 cttcttcttcttcttcgcct 20
>gb|AC027342.5| Homo sapiens chromosome 5 clone CTD-2294O13, complete sequence Length = 112904 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 agcacctcctccttttcctg 338 |||||||||||||||||||| Sbjct: 29350 agcacctcctccttttcctg 29369
>gb|AC159812.2| Mus musculus BAC clone RP24-86O15 from chromosome 9, complete sequence Length = 204400 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 107313 cttcttcttcttcttcgcct 107294
>gb|AY309371.1| Bursera morelensis phosphoenolpyruvate carboxylase gene, exon 4, intron 4, and partial cds Length = 646 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 357 cttcttcttcttcttcgcct 338
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 32399740 cttcttcttcttcttcgcct 32399759 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 987079 gcggcttcttcttcttcttc 987098
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 99245 gcggcttcttcttcttcttc 99264
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 26500132 gcggcttcttcttcttcttc 26500113 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 25729263 gcggcttcttcttcttcttc 25729282
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 35764827 cttcttcttcttcttcgcct 35764808
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 20075991 gcggcttcttcttcttcttc 20076010
>gb|AY181248.1| Kluyveromyces delphensis putative mating-type locus, partial sequence Length = 24379 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 22859 cttcttcttcttcttcgcct 22878
>gb|AC012074.9| Homo sapiens BAC clone RP11-458N5 from 2, complete sequence Length = 197652 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 acctcctccttttcctgcct 341 |||||||||||||||||||| Sbjct: 19309 acctcctccttttcctgcct 19328
>gb|AC013402.9| Homo sapiens BAC clone RP11-134N15 from 2, complete sequence Length = 177882 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 54945 cttcttcttcttcttcgcct 54926
>gb|AY084981.1| Arabidopsis thaliana clone 12338 mRNA, complete sequence Length = 724 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 33 cttcttcttcttcttcgcct 52
>gb|AF296826.1|F15I15 Arabidopsis thaliana BAC F15I15 Length = 93896 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gggcggcttcttcttcttct 34 |||||||||||||||||||| Sbjct: 14638 gggcggcttcttcttcttct 14657
>dbj|AP006059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0023E08 Length = 127560 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 99245 gcggcttcttcttcttcttc 99264
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 1474 gcggcttcttcttcttcttc 1493
>emb|AL928798.20| Mouse DNA sequence from clone RP23-7A19 on chromosome 2, complete sequence Length = 192734 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 57661 cttcttcttcttcttcgcct 57642
>dbj|AP004847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1298_H07 Length = 106434 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 24514 gcggcttcttcttcttcttc 24533
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 48999 gcggcttcttcttcttcttc 48980
>dbj|AB046435.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F15I15 Length = 93896 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gggcggcttcttcttcttct 34 |||||||||||||||||||| Sbjct: 14638 gggcggcttcttcttcttct 14657
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 107011 gcggcttcttcttcttcttc 107030
>dbj|AK109716.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-H10, full insert sequence Length = 2443 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 151 cttcttcttcttcttcgcct 170
>dbj|AK108236.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-G08, full insert sequence Length = 832 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 326 cttcttcttcttcttcgcct 345
>dbj|AK101654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057E24, full insert sequence Length = 926 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 764 gcggcttcttcttcttcttc 745
>dbj|AK072386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081P06, full insert sequence Length = 2145 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 261 gcggcttcttcttcttcttc 242
>emb|AL132877.3|CEY105E8B Caenorhabditis elegans YAC Y105E8B, complete sequence Length = 79271 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 17635 cttcttcttcttcttcgcct 17654
>gb|AE003440.3| Drosophila melanogaster chromosome X, section 24 of 74 of the complete sequence Length = 342195 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 20255 gcggcttcttcttcttcttc 20274
>gb|AC103404.13| Mus musculus chromosome 5, clone RP23-21O1, complete sequence Length = 251988 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 148985 cttcttcttcttcttcgcct 148966
>gb|DQ331108.1| Synthetic construct Saccharomyces cerevisiae clone FLH144605.01X YMR090W gene, complete sequence Length = 684 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 cgcaactttcataggagaca 104 |||||||||||||||||||| Sbjct: 21 cgcaactttcataggagaca 2
>gb|DQ332130.1| Synthetic construct Saccharomyces cerevisiae clone FLH202900.01X FUN12 gene, complete sequence Length = 3009 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 1084 cttcttcttcttcttcgcct 1065
>dbj|D38539.1|CELTMY1A Caenorhabditis elegans tmy-1 gene for tropomyosin isoforms, complete sequence Length = 14408 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 5059 cttcttcttcttcttcgcct 5040
>gb|AF087142.1|AF087142 Homo sapiens TED protein (TED) mRNA, complete cds Length = 4042 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 1166 cttcttcttcttcttcgcct 1147
>gb|U12980.3|SCU12980 Saccharomyces cerevisiae chromosome I left arm sequence Length = 103681 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 74920 cttcttcttcttcttcgcct 74901
>emb|AL031620.1|CEC18B12 Caenorhabditis elegans Cosmid C18B12, complete sequence Length = 42234 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 10207 cttcttcttcttcttcgcct 10188
>gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosome 17, complete sequence Length = 197515 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 187839 cttcttcttcttcttcgcct 187858
>emb|CT030724.7| Mouse DNA sequence from clone RP24-63K13 on chromosome 9, complete sequence Length = 155546 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 121943 cttcttcttcttcttcgcct 121962
>gb|AC134604.5| Mus musculus BAC clone RP23-296I5 from 12, complete sequence Length = 203284 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 85226 gcggcttcttcttcttcttc 85207
>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225736 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 50971 cttcttcttcttcttcgcct 50952
>gb|AF000657.1|ATAF000657 Arabidopsis thaliana BAC F19G10, complete sequence Length = 92948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 72425 cttcttcttcttcttcgcct 72406
>gb|U72620.1|RNU72620 Rattus norvegicus Lot1 mRNA, complete cds Length = 5028 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cggcttcttcttcttcttcg 37 |||||||||||||||||||| Sbjct: 2099 cggcttcttcttcttcttcg 2080
>emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chromosome 16, complete sequence Length = 234878 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 112205 gcggcttcttcttcttcttc 112224
>ref|NM_012760.1| Rattus norvegicus pleiomorphic adenoma gene-like 1 (Plagl1), mRNA Length = 5028 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 cggcttcttcttcttcttcg 37 |||||||||||||||||||| Sbjct: 2099 cggcttcttcttcttcttcg 2080
>emb|AL731678.17| Mouse DNA sequence from clone RP23-39H12 on chromosome X, complete sequence Length = 230186 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 10143 cttcttcttcttcttcgcct 10124
>gb|L29389.1|YSCFUN12A Saccharomyces cerevisiae FUN12 gene, complete cds Length = 3075 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 1035 cttcttcttcttcttcgcct 1016
>gb|AC160635.2| Mus musculus BAC clone RP23-396N20 from chromosome 9, complete sequence Length = 207088 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 57952 cttcttcttcttcttcgcct 57971
>emb|AL731732.15| Mouse DNA sequence from clone RP23-100F3 on chromosome X, complete sequence Length = 230674 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 182699 cttcttcttcttcttcgcct 182680
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 29270 gcggcttcttcttcttcttc 29289
>emb|AJ012806.1|BTA012806 Bos taurus mRNA for glutathione-S-transferase (GST) specific immunoglobulin heavy chain variable region (partial), anti-GST IgVH2 Length = 339 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gaaatggccagtgatggaaa 133 |||||||||||||||||||| Sbjct: 148 gaaatggccagtgatggaaa 167
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0098I11, complete sequence Length = 122970 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 38499 gcggcttcttcttcttcttc 38518
>gb|AC124634.24| Mus musculus chromosome 18, clone RP23-450K16, complete sequence Length = 178989 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cttcttcttcttcttcgcct 40 |||||||||||||||||||| Sbjct: 103697 cttcttcttcttcttcgcct 103678
>emb|AJ507036.1|TGO507036 Toxoplasma gondii mRNA for GPI transamidase 8 (gpi8 gene) Length = 1815 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gcggcttcttcttcttcttc 36 |||||||||||||||||||| Sbjct: 31 gcggcttcttcttcttcttc 50 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,462,411 Number of Sequences: 3902068 Number of extensions: 4462411 Number of successful extensions: 712602 Number of sequences better than 10.0: 170 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 707145 Number of HSP's gapped (non-prelim): 5453 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
