| Clone Name | baet98f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U46003.1|HVU46003 Hordeum vulgare beta-D-glucan exohydrolase, isoenzyme ExoII, mRNA, complete cds Length = 2105 Score = 936 bits (472), Expect = 0.0 Identities = 475/476 (99%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 850 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 910 Query: 121 aagctcaaatttcggggtttcgtgatttcagactggcaaggcattgatcggattactagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 aagctcaaatttcggggtttcgtgatttcagactggcaaggcattgatcggattactagc 970 Query: 181 cctccaggcgtgaactattcttattcagttgaggctggagttggtgccggtattgacatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 cctccaggcgtgaactattcttattcagttgaggctggagttggtgccggtattgacatg 1030 Query: 241 atcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaac 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1031 atcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaac 1090 Query: 301 aacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1091 aacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttc 1150 Query: 361 accatgggtctatttgagagcccctatgctgacccaagcctcgttggtgaactcgggaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 accatgggtctatttgagagcccctatgctgacccaagcctcgttggtgaactcgggaag 1210 Query: 421 caggaacaccgcgatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaa 476 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1211 caggaacaccgtgatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaa 1266
>gb|AY091513.1| Triticum aestivum beta-D-glucan exohydrolase mRNA, complete cds Length = 2116 Score = 864 bits (436), Expect = 0.0 Identities = 466/476 (97%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 766 atgcctgcttattacaattctattatcagaggtgtctccactgttatgacctcgtactct 825 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 885 Query: 121 aagctcaaatttcggggtttcgtgatttcagactggcaaggcattgatcggattactagc 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 886 aagctcaaattccggggtttcgtgatttcagactggcaaggcattgatcggattactagc 945 Query: 181 cctccaggcgtgaactattcttattcagttgaggctggagttggtgccggtattgacatg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 cctccaggcgtgaactattcttattcagttgaggctggagttggtgccggtattgacatg 1005 Query: 241 atcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaac 300 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1006 atcatggttccttatgcctacacggaattcattgatgatctgacataccaagttaagaac 1065 Query: 301 aacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttc 360 ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 1066 aacattatccccatgagcagaattgacgatgctgtctacaggattcttcgggtgaagttc 1125 Query: 361 accatgggtctatttgagagcccctatgctgacccaagcctcgttggtgaactcgggaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1126 accatgggtctatttgagagcccctatgctgacccaagcctcgttggtgaactcgggaag 1185 Query: 421 caggaacaccgcgatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaa 476 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1186 caggaacaccgcgatcttgctcgtgaggccgtcaggaagtcattggtgctgctgaa 1241
>gb|AY586531.1| Secale cereale cell wall beta-glucosidase mRNA, complete cds Length = 2215 Score = 793 bits (400), Expect = 0.0 Identities = 457/476 (96%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 948 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 1007 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 |||||| |||| |||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 1008 agctgggacggaaagaaaatgcacgccaaccattaccttgtcactgattctctgaagaac 1067 Query: 121 aagctcaaatttcggggtttcgtgatttcagactggcaaggcattgatcggattactagc 180 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1068 aagctcaaattccggggtttcgtgatttcagactggcaaggcattgatcggattactagt 1127 Query: 181 cctccaggcgtgaactattcttattcagttgaggctggagttggtgccggtattgacatg 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1128 cctccaggcgtgaactattcttattcagttgaggctggcgttggtgccggtattgacatg 1187 Query: 241 atcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaac 300 ||||||| ||||| ||||||||| | ||||||||||||||||| ||||||||||||||| Sbjct: 1188 atcatgggtccttatgcctacacgcagttcattgatgatctgacctaccaagttaagaac 1247 Query: 301 aacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttc 360 |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 1248 aacatcatccccatgagcagaatcgacgatgctgtctacaggattcttagggtgaagttc 1307 Query: 361 accatgggtctatttgagagcccctatgctgacccaagcctcgttggtgaactcgggaag 420 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1308 accatgggtctatttgagagcccttatgctgacccaagcctcgtcggtgaactcgggaag 1367 Query: 421 caggaacaccgcgatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaa 476 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1368 caggaacatcgcgatctcgctcgtgaggccgtcaggaagtcattggtgttgctgaa 1423
>ref|XM_469751.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2156 Score = 341 bits (172), Expect = 1e-90 Identities = 400/476 (84%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||| ||||||| ||||||||||| ||||| ||||||||||| ||| || |||||| Sbjct: 1044 atgcctccttattataattctatcattagaggagtctccactgtcatggtttcatactct 1103 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 |||||||| || ||||||||||| |||||| ||| ||||||||||||| |||||| Sbjct: 1104 agctggaatggagtaaaaatgcacgcgaaccatcacctaatcactgattttctcaagaac 1163 Query: 121 aagctcaaatttcggggtttcgtgatttcagactggcaaggcattgatcggattactagc 180 |||||| || ||||||| |||||||| ||||||||||||||||| ||||| ||| Sbjct: 1164 aagctccgcttcaggggttttgtgatttctgactggcaaggcattgaccggatcacttct 1223 Query: 181 cctccaggcgtgaactattcttattcagttgaggctggagttggtgccggtattgacatg 240 ||||| |||||||||||| ||| | ||||||||| |||||||||| ||||||||| Sbjct: 1224 cctccgcataagaactattcttactcaatcgaggctggaattggtgccggcattgacatg 1283 Query: 241 atcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaac 300 ||||||||||||| | |||||||||||||||||||||| |||||| | |||||||| ||| Sbjct: 1284 atcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaac 1343 Query: 301 aacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttc 360 || || ||||||||||||||||| ||||||||||||||||||||||| | || |||||| Sbjct: 1344 aaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagttc 1403 Query: 361 accatgggtctatttgagagcccctatgctgacccaagcctcgttggtgaactcgggaag 420 ||||||||||||||||||||||| | ||||||| | ||||||| | |||||| || ||| Sbjct: 1404 accatgggtctatttgagagcccttttgctgactctagcctcgccgatgaacttggaaag 1463 Query: 421 caggaacaccgcgatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaa 476 || || ||||| || || || || || || ||||||||||| |||||| ||||||| Sbjct: 1464 caagagcaccgtgagctcgcgcgcgaagcggtcaggaagtccttggtgctgctgaa 1519
>dbj|AK119203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-D08, full insert sequence Length = 1675 Score = 341 bits (172), Expect = 1e-90 Identities = 400/476 (84%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||| ||||||| ||||||||||| ||||| ||||||||||| ||| || |||||| Sbjct: 316 atgcctccttattataattctatcattagaggagtctccactgtcatggtttcatactct 375 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 |||||||| || ||||||||||| |||||| ||| ||||||||||||| |||||| Sbjct: 376 agctggaatggagtaaaaatgcacgcgaaccatcacctaatcactgattttctcaagaac 435 Query: 121 aagctcaaatttcggggtttcgtgatttcagactggcaaggcattgatcggattactagc 180 |||||| || ||||||| |||||||| ||||||||||||||||| ||||| ||| Sbjct: 436 aagctccgcttcaggggttttgtgatttctgactggcaaggcattgaccggatcacttct 495 Query: 181 cctccaggcgtgaactattcttattcagttgaggctggagttggtgccggtattgacatg 240 ||||| |||||||||||| ||| | ||||||||| |||||||||| ||||||||| Sbjct: 496 cctccgcataagaactattcttactcaatcgaggctggaattggtgccggcattgacatg 555 Query: 241 atcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaac 300 ||||||||||||| | |||||||||||||||||||||| |||||| | |||||||| ||| Sbjct: 556 atcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaac 615 Query: 301 aacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttc 360 || || ||||||||||||||||| ||||||||||||||||||||||| | || |||||| Sbjct: 616 aaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagttc 675 Query: 361 accatgggtctatttgagagcccctatgctgacccaagcctcgttggtgaactcgggaag 420 ||||||||||||||||||||||| | ||||||| | ||||||| | |||||| || ||| Sbjct: 676 accatgggtctatttgagagcccttttgctgactctagcctcgccgatgaacttggaaag 735 Query: 421 caggaacaccgcgatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaa 476 || || ||||| || || || || || || ||||||||||| |||||| ||||||| Sbjct: 736 caagagcaccgtgagctcgcgcgcgaagcggtcaggaagtccttggtgctgctgaa 791
>dbj|AK065044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H22, full insert sequence Length = 3093 Score = 341 bits (172), Expect = 1e-90 Identities = 400/476 (84%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||| ||||||| ||||||||||| ||||| ||||||||||| ||| || |||||| Sbjct: 1734 atgcctccttattataattctatcattagaggagtctccactgtcatggtttcatactct 1793 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 |||||||| || ||||||||||| |||||| ||| ||||||||||||| |||||| Sbjct: 1794 agctggaatggagtaaaaatgcacgcgaaccatcacctaatcactgattttctcaagaac 1853 Query: 121 aagctcaaatttcggggtttcgtgatttcagactggcaaggcattgatcggattactagc 180 |||||| || ||||||| |||||||| ||||||||||||||||| ||||| ||| Sbjct: 1854 aagctccgcttcaggggttttgtgatttctgactggcaaggcattgaccggatcacttct 1913 Query: 181 cctccaggcgtgaactattcttattcagttgaggctggagttggtgccggtattgacatg 240 ||||| |||||||||||| ||| | ||||||||| |||||||||| ||||||||| Sbjct: 1914 cctccgcataagaactattcttactcaatcgaggctggaattggtgccggcattgacatg 1973 Query: 241 atcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaac 300 ||||||||||||| | |||||||||||||||||||||| |||||| | |||||||| ||| Sbjct: 1974 atcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaac 2033 Query: 301 aacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttc 360 || || ||||||||||||||||| ||||||||||||||||||||||| | || |||||| Sbjct: 2034 aaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagttc 2093 Query: 361 accatgggtctatttgagagcccctatgctgacccaagcctcgttggtgaactcgggaag 420 ||||||||||||||||||||||| | ||||||| | ||||||| | |||||| || ||| Sbjct: 2094 accatgggtctatttgagagcccttttgctgactctagcctcgccgatgaacttggaaag 2153 Query: 421 caggaacaccgcgatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaa 476 || || ||||| || || || || || || ||||||||||| |||||| ||||||| Sbjct: 2154 caagagcaccgtgagctcgcgcgcgaagcggtcaggaagtccttggtgctgctgaa 2209
>dbj|AK122100.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125I15, full insert sequence Length = 2144 Score = 333 bits (168), Expect = 3e-88 Identities = 399/476 (83%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||| ||||||| ||||||||||| ||||| | ||||||||| ||| || |||||| Sbjct: 784 atgcctccttattataattctatcattagaggagcctccactgtcatggtttcatactct 843 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 |||||||| || ||||||||||| |||||| ||| ||||||||||||| |||||| Sbjct: 844 agctggaatggagtaaaaatgcacgcgaaccatcacctaatcactgattttctcaagaac 903 Query: 121 aagctcaaatttcggggtttcgtgatttcagactggcaaggcattgatcggattactagc 180 |||||| || ||||||| |||||||| ||||||||||||||||| ||||| ||| Sbjct: 904 aagctccgcttcaggggttttgtgatttctgactggcaaggcattgaccggatcacttct 963 Query: 181 cctccaggcgtgaactattcttattcagttgaggctggagttggtgccggtattgacatg 240 ||||| |||||||||||| ||| | ||||||||| |||||||||| ||||||||| Sbjct: 964 cctccgcataagaactattcttactcaatcgaggctggaattggtgccggcattgacatg 1023 Query: 241 atcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaac 300 ||||||||||||| | |||||||||||||||||||||| |||||| | |||||||| ||| Sbjct: 1024 atcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaac 1083 Query: 301 aacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttc 360 || || ||||||||||||||||| ||||||||||||||||||||||| | || |||||| Sbjct: 1084 aaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagttc 1143 Query: 361 accatgggtctatttgagagcccctatgctgacccaagcctcgttggtgaactcgggaag 420 ||||||||||||||||||||||| | ||||||| | ||||||| | |||||| || ||| Sbjct: 1144 accatgggtctatttgagagcccttttgctgactctagcctcgccgatgaacttggaaag 1203 Query: 421 caggaacaccgcgatcttgctcgtgaggccgtcaggaagtcattggtgttgctgaa 476 || || ||||| || || || || || || ||||||||||| |||||| ||||||| Sbjct: 1204 caagagcaccgtgagctcgcgcgcgaagcggtcaggaagtccttggtgctgctgaa 1259
>gb|AY103742.1| Zea mays PCO090119 mRNA sequence Length = 2612 Score = 274 bits (138), Expect = 2e-70 Identities = 378/458 (82%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||| |||| ||||| ||||||||| ||||||||||||| || ||| ||| ||||| Sbjct: 1149 atgcctccttactacaactctatcatccgaggtgtctccacggtcatggtctcctactcc 1208 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 ||||||||||| ||| |||||||| ||||||||||| ||||| |||||||| |||||| Sbjct: 1209 agctggaacggagtgaagatgcacgcgaaccatttcctggtcacggattttctcaagaac 1268 Query: 121 aagctcaaatttcggggtttcgtgatttcagactggcaaggcattgatcggattactagc 180 |||||||| ||| ||||||| |||||||| |||||| | |||||||||||||| |||| Sbjct: 1269 aagctcaagtttaggggttttgtgatttccgactgggagggcattgatcggatcactact 1328 Query: 181 cctccaggcgtgaactattcttattcagttgaggctggagttggtgccggtattgacatg 240 ||||| || ||||| ||||| ||| |||||||||| |||||||| || ||||||||| Sbjct: 1329 cctcctcacgccaactactcttactcaattgaggctggtgttggtgctggaattgacatg 1388 Query: 241 atcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaac 300 ||||||||||| || |||||||||||||| || |||||||| |||||| ||||| Sbjct: 1389 atcatggttccattcagatacacagaattcatcgacgatctgacgacacaagttcagaac 1448 Query: 301 aacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttc 360 || |||||||||||||||||||| |||| || ||||||||||| || | || |||||| Sbjct: 1449 aaggtcatccccatgagcagaatcgacgacgccgtctacaggatccttcgtgtcaagttc 1508 Query: 361 accatgggtctatttgagagcccctatgctgacccaagcctcgttggtgaactcgggaag 420 ||||||||||| || |||| ||| || | ||| | ||||||| || || ||||||||| Sbjct: 1509 accatgggtctgttcgagaacccttaccccgactctagcctcgccggcgagctcgggaag 1568 Query: 421 caggaacaccgcgatcttgctcgtgaggccgtcaggaa 458 || |||||||| || || || || || ||||||||||| Sbjct: 1569 caagaacaccgggaactggcgcgcgaagccgtcaggaa 1606
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 240 gatcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaa 299 |||||||||||||| | |||||||||||||||||||||| |||||| | |||||||| || Sbjct: 30563562 gatcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaa 30563621 Query: 300 caacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagtt 359 ||| || ||||||||||||||||| ||||||||||||||||||||||| | || ||||| Sbjct: 30563622 caaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagtt 30563681 Query: 360 caccatgggtctatttgagagcccctatgctgacccaagcctcg 403 |||||||||||||||||||||||| | ||||||| | ||||||| Sbjct: 30563682 caccatgggtctatttgagagcccttttgctgactctagcctcg 30563725 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||| ||||||| ||||||||||| ||||| ||||||||||| ||| || |||||| Sbjct: 30562873 atgcctccttattataattctatcattagaggagtctccactgtcatggtttcatactct 30562932 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 |||||||| || ||||||||||| |||||| ||| ||||||||||||| |||||| Sbjct: 30562933 agctggaatggagtaaaaatgcacgcgaaccatcacctaatcactgattttctcaagaac 30562992 Query: 121 aagctc 126 |||||| Sbjct: 30562993 aagctc 30562998 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 135 gggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtgaa 194 |||||| |||||||| ||||||||||||||||| ||||| ||| ||||| ||| Sbjct: 30563113 gggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataagaa 30563172 Query: 195 ctattcttattcagttgaggctggagttggtgccggtattgacatg 240 ||||||||| ||| | ||||||||| |||||||||| ||||||||| Sbjct: 30563173 ctattcttactcaatcgaggctggaattggtgccggcattgacatg 30563218 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 34 gtctccactgttatgacctcgtactctagctggaacggcaagaaaatgcacgccaacca 92 |||||||| || |||| ||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 30593931 gtctccaccgtcatgatctcctactcgagctggaacggcatcaagatgcacgccaacca 30593989
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 240 gatcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaa 299 |||||||||||||| | |||||||||||||||||||||| |||||| | |||||||| || Sbjct: 95135 gatcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaa 95194 Query: 300 caacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagtt 359 ||| || ||||||||||||||||| ||||||||||||||||||||||| | || ||||| Sbjct: 95195 caaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagtt 95254 Query: 360 caccatgggtctatttgagagcccctatgctgacccaagcctcg 403 |||||||||||||||||||||||| | ||||||| | ||||||| Sbjct: 95255 caccatgggtctatttgagagcccttttgctgactctagcctcg 95298 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||| ||||||| ||||||||||| ||||| ||||||||||| ||| || |||||| Sbjct: 94446 atgcctccttattataattctatcattagaggagtctccactgtcatggtttcatactct 94505 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 |||||||| || ||||||||||| |||||| ||| ||||||||||||| |||||| Sbjct: 94506 agctggaatggagtaaaaatgcacgcgaaccatcacctaatcactgattttctcaagaac 94565 Query: 121 aagctc 126 |||||| Sbjct: 94566 aagctc 94571 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 135 gggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtgaa 194 |||||| |||||||| ||||||||||||||||| ||||| ||| ||||| ||| Sbjct: 94686 gggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataagaa 94745 Query: 195 ctattcttattcagttgaggctggagttggtgccggtattgacatg 240 ||||||||| ||| | ||||||||| |||||||||| ||||||||| Sbjct: 94746 ctattcttactcaatcgaggctggaattggtgccggcattgacatg 94791 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 34 gtctccactgttatgacctcgtactctagctggaacggcaagaaaatgcacgccaacca 92 |||||||| || |||| ||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 125504 gtctccaccgtcatgatctcctactcgagctggaacggcatcaagatgcacgccaacca 125562
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 190 bits (96), Expect = 3e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 240 gatcatggttccttttgcctacacagaattcattgatgatctgacataccaagttaagaa 299 |||||||||||||| | |||||||||||||||||||||| |||||| | |||||||| || Sbjct: 30654984 gatcatggttccttatacctacacagaattcattgatgacctgacagagcaagttaacaa 30655043 Query: 300 caacatcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagtt 359 ||| || ||||||||||||||||| ||||||||||||||||||||||| | || ||||| Sbjct: 30655044 caaaattatccccatgagcagaattgacgatgctgtctacaggattctccgagtcaagtt 30655103 Query: 360 caccatgggtctatttgagagcccctatgctgacccaagcctcg 403 |||||||||||||||||||||||| | ||||||| | ||||||| Sbjct: 30655104 caccatgggtctatttgagagcccttttgctgactctagcctcg 30655147 Score = 91.7 bits (46), Expect = 2e-15 Identities = 106/126 (84%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||| ||||||| ||||||||||| ||||| ||||||||||| ||| || |||||| Sbjct: 30654295 atgcctccttattataattctatcattagaggagtctccactgtcatggtttcatactct 30654354 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 |||||||| || ||||||||||| |||||| ||| ||||||||||||| |||||| Sbjct: 30654355 agctggaatggagtaaaaatgcacgcgaaccatcacctaatcactgattttctcaagaac 30654414 Query: 121 aagctc 126 |||||| Sbjct: 30654415 aagctc 30654420 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 135 gggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtgaa 194 |||||| |||||||| ||||||||||||||||| ||||| ||| ||||| ||| Sbjct: 30654535 gggttttgtgatttctgactggcaaggcattgaccggatcacttctcctccgcataagaa 30654594 Query: 195 ctattcttattcagttgaggctggagttggtgccggtattgacatg 240 ||||||||| ||| | ||||||||| |||||||||| ||||||||| Sbjct: 30654595 ctattcttactcaatcgaggctggaattggtgccggcattgacatg 30654640 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 34 gtctccactgttatgacctcgtactctagctggaacggcaagaaaatgcacgccaacca 92 |||||||| || |||| ||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 30685353 gtctccaccgtcatgatctcctactcgagctggaacggcatcaagatgcacgccaacca 30685411
>gb|AF225411.1|AF225411 Zea mays exoglucanase precursor (exg1) gene, complete cds Length = 4193 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||| |||| ||||| ||||||||| ||||||||||||| || ||| ||| ||||| Sbjct: 1925 atgcctccttactacaactctatcatccgaggtgtctccacggtcatggtctcctactcc 1984 Query: 61 agctggaacggcaagaaaatgcacgccaaccatttccttgtcactgattttctgaagaac 120 ||||||||||| ||| |||||||| ||||||||||| ||||| |||||||| |||||| Sbjct: 1985 agctggaacggagtgaagatgcacgcgaaccatttcctagtcacggattttctcaagaac 2044 Query: 121 aagctcaa 128 |||||||| Sbjct: 2045 aagctcaa 2052 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 259 tacacagaattcattgatgatctgacataccaagttaagaacaacatcatccccatgagc 318 |||||||||||||| || || ||||| |||||| ||||||| |||||||||||||| Sbjct: 2583 tacacagaattcatcgacgacctgacgacacaagttcagaacaaggtcatccccatgagc 2642 Query: 319 agaatcaacgatgctgtctacaggattctcagggtgaagttcaccatggg 368 |||||| |||| || ||||||||||| || | || |||||||||||||| Sbjct: 2643 agaatcgacgacgccgtctacaggatccttcgtgtcaagttcaccatggg 2692 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 135 gggtttcgtgatttcagactggcaaggcattgatcggattactagccctccaggcgtgaa 194 |||||| |||||||| |||||| | |||||||||||||| |||| ||||| || || Sbjct: 2155 gggttttgtgatttccgactgggagggcattgatcggatcactactcctcctcacgccaa 2214 Query: 195 ctattcttattcagttgaggctggagttggtgccggtattgacatg 240 ||| ||||| ||| |||||||||| |||||||| || ||||||||| Sbjct: 2215 ctactcttactcaattgaggctggtgttggtgctggaattgacatg 2260
>ref|XM_464008.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1947 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 341 ggattctcagggtgaagttcaccatgggtctatttgagagcccctatgctgacccaagcc 400 |||||||| ||||||||||||||||||| || || ||| ||||||| || |||| |||| Sbjct: 1166 ggattctccgggtgaagttcaccatgggcctcttcgagcgcccctacgccgacctcagcc 1225 Query: 401 tcgttggtgaactcgggaagcaggaacaccgcgatcttgctcgtgaggccgt 452 ||| || || |||||||||||||| |||||||| |||||||| || ||||| Sbjct: 1226 tcgccggcgagctcgggaagcaggagcaccgcgaccttgctcgcgatgccgt 1277
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 341 ggattctcagggtgaagttcaccatgggtctatttgagagcccctatgctgacccaagcc 400 |||||||| ||||||||||||||||||| || || ||| ||||||| || |||| |||| Sbjct: 1645061 ggattctccgggtgaagttcaccatgggcctcttcgagcgcccctacgccgacctcagcc 1645002 Query: 401 tcgttggtgaactcgggaagcaggaacaccgcgatcttgctcgtgaggccgt 452 ||| || || |||||||||||||| |||||||| |||||||| || ||||| Sbjct: 1645001 tcgccggcgagctcgggaagcaggagcaccgcgaccttgctcgcgatgccgt 1644950
>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1007_D04 Length = 125503 Score = 87.7 bits (44), Expect = 3e-14 Identities = 95/112 (84%) Strand = Plus / Minus Query: 341 ggattctcagggtgaagttcaccatgggtctatttgagagcccctatgctgacccaagcc 400 |||||||| ||||||||||||||||||| || || ||| ||||||| || |||| |||| Sbjct: 82164 ggattctccgggtgaagttcaccatgggcctcttcgagcgcccctacgccgacctcagcc 82105 Query: 401 tcgttggtgaactcgggaagcaggaacaccgcgatcttgctcgtgaggccgt 452 ||| || || |||||||||||||| |||||||| |||||||| || ||||| Sbjct: 82104 tcgccggcgagctcgggaagcaggagcaccgcgaccttgctcgcgatgccgt 82053
>gb|AY335818.1| Gossypium hirsutum beta-D-glucosidase mRNA, complete cds Length = 2071 Score = 67.9 bits (34), Expect = 3e-08 Identities = 103/126 (81%) Strand = Plus / Plus Query: 193 aactattcttattcagttgaggctggagttggtgccggtattgacatgatcatggttcct 252 ||||| || ||||| || || |||||||| |||||||| ||||| ||| ||||||||||| Sbjct: 1065 aactactcatattctgtagaagctggagtcggtgccgggattgatatggtcatggttcct 1124 Query: 253 tttgcctacacagaattcattgatgatctgacataccaagttaagaacaacatcatcccc 312 | | || ||||||||| |||||||| || || || || ||||| ||||| ||||| || Sbjct: 1125 tataacttcacagaatttattgatgacctaacctatcaggttaaaaacaatatcattcca 1184 Query: 313 atgagc 318 |||||| Sbjct: 1185 atgagc 1190
>gb|AF102868.1| Hordeum vulgare subsp. vulgare beta-D-glucan exohydrolase isoenzyme ExoI mRNA, complete cds Length = 2161 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 305 tcatccccatgagcagaatcaacgatgctgtctacaggattctcagggtgaagttcacca 364 |||||||||||||||| ||| ||||||| || | |||| || |||| |||||||||| Sbjct: 1101 tcatccccatgagcaggatcgacgatgccgtgacccggatcctgcgggtcaagttcacca 1160 Query: 365 tgggtctatttgagagcccctatgctgaccc 395 ||||||| || |||| |||||| |||||||| Sbjct: 1161 tgggtctcttcgagaacccctacgctgaccc 1191
>ref|XM_469757.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2192 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 34 gtctccactgttatgacctcgtactctagctggaacggcaagaaaatgcacgccaacca 92 |||||||| || |||| ||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 958 gtctccaccgtcatgatctcctactcgagctggaacggcatcaagatgcacgccaacca 1016 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 212 aggctggagttggtgccggtattgacatgatcatggt 248 ||||||||||| |||||| ||||||||||||||||| Sbjct: 1136 aggctggagttcttgccggcattgacatgatcatggt 1172
>gb|AY357946.1| Lilium longiflorum exo-beta-glucanase (ExoI) mRNA, complete cds Length = 2134 Score = 54.0 bits (27), Expect = 4e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 31 ggtgtctccactgttatgacctcgtactctagctggaacggcaagaaaatgcacgccaac 90 |||||||||||||| |||| ||| ||||| || ||||| || ||||||||||| || ||| Sbjct: 885 ggtgtctccactgtgatgatctcttactcgagttggaatgggaagaaaatgcatgctaac 944 Query: 91 cat 93 ||| Sbjct: 945 cat 947
>dbj|AK073110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H22, full insert sequence Length = 2424 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 34 gtctccactgttatgacctcgtactctagctggaacggcaagaaaatgcacgccaacca 92 |||||||| || |||| ||| ||||| ||||||||||||| || |||||||||||||| Sbjct: 1171 gtctccaccgtcatgatctcctactcgagctggaacggcatcaagatgcacgccaacca 1229 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 212 aggctggagttggtgccggtattgacatgatcatggt 248 ||||||||||| |||||| ||||||||||||||||| Sbjct: 1349 aggctggagttcttgccggcattgacatgatcatggt 1385
>emb|AJ006501.1|TMA6501 Tropaeolum majus mRNA for beta-D-glucosidase Length = 2113 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 118 aacaagctcaaatttcggggtttcgtgatttcagactggcaaggcattgatcggattact 177 |||||||| ||||| ||||||| || || ||||| ||| ||||||||||| |||||||| Sbjct: 985 aacaagctgaaattcaggggttttgtcatatcagattgggaaggcattgataggattact 1044
>ref|NM_122103.3| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT5G20940 mRNA, complete cds Length = 2078 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 305 tcatccccatgagcagaatcaacgatgctgt 335 ||||||| |||||||||||| |||||||||| Sbjct: 1133 tcatcccgatgagcagaatcgacgatgctgt 1163
>dbj|AB119653.1| Lilium longiflorum LP-ExoII mRNA for exo-1,3-beta-glucanase, complete cds Length = 2120 Score = 46.1 bits (23), Expect = 0.10 Identities = 68/83 (81%) Strand = Plus / Plus Query: 1 atgcctgcttattacaattctatcatcagaggtgtctccactgttatgacctcgtactct 60 |||||||| || || ||||| ||||||| || ||||||||||| ||| ||| ||||| Sbjct: 864 atgcctgcctactataattccatcatcaagggcgtctccactgtcatggtctcttactcg 923 Query: 61 agctggaacggcaagaaaatgca 83 || ||||| || ||||||||||| Sbjct: 924 agttggaatgggaagaaaatgca 946
>gb|AY092999.1| Arabidopsis thaliana beta-glucosidase-like protein (At5g20940) mRNA, complete cds Length = 2078 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 305 tcatccccatgagcagaatcaacgatgctgt 335 ||||||| |||||||||||| |||||||||| Sbjct: 1133 tcatcccgatgagcagaatcgacgatgctgt 1163
>emb|BX830026.1|CNS0A1C4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1734 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 305 tcatccccatgagcagaatcaacgatgctgt 335 ||||||| |||||||||||| |||||||||| Sbjct: 1047 tcatcccgatgagcagaatcgacgatgctgt 1077
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 305 tcatccccatgagcagaatcaacgatgctgt 335 ||||||| |||||||||||| |||||||||| Sbjct: 48809 tcatcccgatgagcagaatcgacgatgctgt 48779
>gb|AC162930.5| Mus musculus BAC clone RP23-221B16 from chromosome 8, complete sequence Length = 222939 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 92 atttccttgtcactgattttct 113 |||||||||||||||||||||| Sbjct: 160495 atttccttgtcactgattttct 160516
>emb|AL050344.31|HSJ799D16 Human DNA sequence from clone RP4-799D16 on chromosome 1p34.3-36.1 Contains the 3' end of a novel gene, complete sequence Length = 127109 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 211 gaggctggagttggtgccggta 232 |||||||||||||||||||||| Sbjct: 39189 gaggctggagttggtgccggta 39168
>gb|AF064707.1|AF064707 Zea mays exhydrolase II mRNA, complete cds Length = 2231 Score = 44.1 bits (22), Expect = 0.41 Identities = 49/58 (84%) Strand = Plus / Plus Query: 35 tctccactgttatgacctcgtactctagctggaacggcaagaaaatgcacgccaacca 92 ||||||| || |||| ||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 925 tctccaccgtcatgatctcctactccagctggaacgggctcaaaatgcacgccaacca 982
>ref|NM_147836.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds AT5G04885 mRNA, complete cds Length = 2349 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 355 aagttcaccatgggtctatttgaga 379 ||||||||||||||||| ||||||| Sbjct: 1267 aagttcaccatgggtctttttgaga 1291
>gb|BC068777.1| Xenopus laevis hypothetical protein MGC81300, mRNA (cDNA clone MGC:81300 IMAGE:6632187), complete cds Length = 5308 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 acagaattcattgatgatctgacat 286 ||||||||||||||||||| ||||| Sbjct: 480 acagaattcattgatgatcagacat 504
>gb|BT013550.1| Lycopersicon esculentum clone 132277F, mRNA sequence Length = 2049 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 272 ttgatgatctgacataccaagttaagaacaacatcatccccatgagcag 320 ||||||||||| | | |||||| | |||||| ||||| ||||||||||| Sbjct: 1104 ttgatgatctggctttccaagtaaggaacaatatcattcccatgagcag 1152
>ref|NM_001017729.1| Danio rerio zgc:112148 (zgc:112148), mRNA Length = 849 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 acaggattctcagggtgaagt 358 ||||||||||||||||||||| Sbjct: 46 acaggattctcagggtgaagt 66
>gb|BC093225.1| Danio rerio zgc:112148, mRNA (cDNA clone MGC:112148 IMAGE:7429318), complete cds Length = 849 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 acaggattctcagggtgaagt 358 ||||||||||||||||||||| Sbjct: 46 acaggattctcagggtgaagt 66
>dbj|AK118082.1| Arabidopsis thaliana At5g04885 mRNA for unknown protein, complete cds, clone: RAFL19-33-I17 Length = 2344 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 355 aagttcaccatgggtctatttgaga 379 ||||||||||||||||| ||||||| Sbjct: 1266 aagttcaccatgggtctttttgaga 1290
>dbj|AB008271.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUK11 Length = 79073 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 355 aagttcaccatgggtctatttgaga 379 ||||||||||||||||| ||||||| Sbjct: 72894 aagttcaccatgggtctttttgaga 72918
>ref|NM_145808.1| Homo sapiens myotrophin (MTPN), mRNA Length = 3770 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tgatcatggttccttttgcc 258 |||||||||||||||||||| Sbjct: 784 tgatcatggttccttttgcc 765
>gb|AY393717.1| Cussonia paniculata tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; chloroplast Length = 902 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 ttggtgccggtattgacatg 240 |||||||||||||||||||| Sbjct: 460 ttggtgccggtattgacatg 441
>gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete sequence Length = 163910 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 ctatttgagagcccctatgctgac 393 |||||||| ||||||||||||||| Sbjct: 14867 ctatttgatagcccctatgctgac 14890
>gb|AC132260.3| Mus musculus BAC clone RP24-370C1 from chromosome 13, complete sequence Length = 160903 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ccttttgcctacacagaatt 269 |||||||||||||||||||| Sbjct: 99602 ccttttgcctacacagaatt 99621
>gb|AC146544.2| Gasterosteus aculeatus clone CH213-80N20, complete sequence Length = 181589 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 caccatgggtctatttgaga 379 |||||||||||||||||||| Sbjct: 155378 caccatgggtctatttgaga 155359
>gb|AC116328.3| Mus musculus BAC clone RP24-131I17 from 15, complete sequence Length = 149291 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ttattacaattctatcatca 28 |||||||||||||||||||| Sbjct: 27295 ttattacaattctatcatca 27276
>gb|AC146543.2| Gasterosteus aculeatus clone CH213-67L12, complete sequence Length = 197879 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 caccatgggtctatttgaga 379 |||||||||||||||||||| Sbjct: 133796 caccatgggtctatttgaga 133777
>gb|L12609.2|CTFCPRBCLA Clethra alnifolia ribulose 1,5-bisphosphate carboxylase large subunit (rbcL) gene, partial cds; chloroplast gene for chloroplast product Length = 1398 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 ccgcgatcttgctcgtgagg 448 |||||||||||||||||||| Sbjct: 1272 ccgcgatcttgctcgtgagg 1291
>gb|AC157349.7| Medicago truncatula clone mth2-139l1, complete sequence Length = 116909 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gctggagttggtgccggtat 233 |||||||||||||||||||| Sbjct: 83850 gctggagttggtgccggtat 83831
>gb|BC013989.1| Homo sapiens cDNA clone IMAGE:3641578, **** WARNING: chimeric clone **** Length = 4793 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tgatcatggttccttttgcc 258 |||||||||||||||||||| Sbjct: 912 tgatcatggttccttttgcc 893
>emb|AL441943.6| Human DNA sequence from clone RP11-69C17 on chromosome 10 Contains four novel genes (FLJ40155) (FLJ31539), complete sequence Length = 203234 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 gaactcgggaagcaggaaca 428 |||||||||||||||||||| Sbjct: 97541 gaactcgggaagcaggaaca 97560
>emb|AL162430.15| Human DNA sequence from clone RP11-296A18 on chromosome 1 Contains for novel genes, a cofilin 1 (non-muscle) (CFL1) pseudogene, the RNF11 gene for ring finger protein 11, a ribosomal protein S2 (RPS2) pseudogene and the 3' end of the C1orf34 gene for chromosome 1 open reading frame 34, complete sequence Length = 211791 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ttccttgtcactgattttct 113 |||||||||||||||||||| Sbjct: 70395 ttccttgtcactgattttct 70414
>emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E19 on chromosome 6q23.2-24.2, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ttttgcctacacagaattca 271 |||||||||||||||||||| Sbjct: 107456 ttttgcctacacagaattca 107475
>gb|DQ020143.1| Gallus gallus adseverin-like mRNA, complete sequence Length = 3117 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ggctggagttggtgccggta 232 |||||||||||||||||||| Sbjct: 102 ggctggagttggtgccggta 121
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tgcttattacaattctatca 25 |||||||||||||||||||| Sbjct: 1049019 tgcttattacaattctatca 1049038
>emb|AL834231.1|HSM805255 Homo sapiens mRNA; cDNA DKFZp761E1322 (from clone DKFZp761E1322) Length = 3770 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tgatcatggttccttttgcc 258 |||||||||||||||||||| Sbjct: 784 tgatcatggttccttttgcc 765
>dbj|AK056225.1| Homo sapiens cDNA FLJ31663 fis, clone NT2RI2004504, highly similar to MYOTROPHIN Length = 2156 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tgatcatggttccttttgcc 258 |||||||||||||||||||| Sbjct: 815 tgatcatggttccttttgcc 796
>gb|AC148816.3| Medicago truncatula chromosome 7 BAC clone mth2-16i24, complete sequence Length = 123655 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 ctacacagaattcattgatgatct 281 |||||| ||||||||||||||||| Sbjct: 78082 ctacaccgaattcattgatgatct 78059
>gb|AF528383.1| Hypochaeris sessiliflora isolate 1 chloroplast tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer region, partial sequence Length = 845 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 ttggtgccggtattgacatg 240 |||||||||||||||||||| Sbjct: 417 ttggtgccggtattgacatg 398
>gb|AC009198.8|AC009198 Drosophila melanogaster, chromosome 2L, region 33B-33C, BAC clone BACR19C12, complete sequence Length = 171134 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ttccttgtcactgattttctgaag 117 |||||| ||||||||||||||||| Sbjct: 86391 ttccttctcactgattttctgaag 86368
>gb|AF231856.1|AF231856 Nestegis lanceolata tRNA-Leu (trnL) gene, partial intron and 3' exon, and trnL-trnF spacer region; chloroplast gene for chloroplast product Length = 858 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 ttggtgccggtattgacatg 240 |||||||||||||||||||| Sbjct: 432 ttggtgccggtattgacatg 413
>gb|AC015987.6| Homo sapiens chromosome 7 clone RP11-207O19, complete sequence Length = 181882 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tgatcatggttccttttgcc 258 |||||||||||||||||||| Sbjct: 123683 tgatcatggttccttttgcc 123702
>gb|AC024083.3|AC024083 Homo sapiens chromosome 7 clone RP11-24I23, complete sequence Length = 152283 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 tgatcatggttccttttgcc 258 |||||||||||||||||||| Sbjct: 25364 tgatcatggttccttttgcc 25383
>gb|AF212027.1|AF212027 Deprea glabra trnL gene, partial sequence; chloroplast gene for chloroplast product Length = 516 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 ttggtgccggtattgacatg 240 |||||||||||||||||||| Sbjct: 486 ttggtgccggtattgacatg 467
>emb|BX927078.22| Zebrafish DNA sequence from clone CH211-284J7 in linkage group 3, complete sequence Length = 149711 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 tttgagagcccctatgctga 392 |||||||||||||||||||| Sbjct: 124417 tttgagagcccctatgctga 124398
>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE Length = 136068 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gctggagttggtgccggtat 233 |||||||||||||||||||| Sbjct: 125652 gctggagttggtgccggtat 125633
>gb|AE003635.2| Drosophila melanogaster chromosome 2L, section 44 of 83 of the complete sequence Length = 308012 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ttccttgtcactgattttctgaag 117 |||||| ||||||||||||||||| Sbjct: 147362 ttccttctcactgattttctgaag 147339
>gb|AC147224.5| Mus musculus BAC clone RP23-101E7 from 15, complete sequence Length = 201924 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ttattacaattctatcatca 28 |||||||||||||||||||| Sbjct: 169047 ttattacaattctatcatca 169028 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,844,533 Number of Sequences: 3902068 Number of extensions: 3844533 Number of successful extensions: 85616 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 85392 Number of HSP's gapped (non-prelim): 206 length of query: 476 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 454 effective length of database: 17,147,199,772 effective search space: 7784828696488 effective search space used: 7784828696488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)