>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 42/90 (46%), Positives = 54/90 (60%)
 Frame = +2

Query: 86  MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAG 265
           MA+L  ++MLGT L+F   SR  ++AP A +         F+           V+ +S  
Sbjct: 1   MASLGVSEMLGTPLNFRAVSR--SSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETS-- 56

Query: 266 IDDELAKWYGPDRRIHLPNGLLDRSEVPEY 355
             DELAKWYGPDRRI LP+GLLDRSE+PEY
Sbjct: 57  --DELAKWYGPDRRIFLPDGLLDRSEIPEY 84

>PTW3C_BACSU (P39816) Putative PTS system glucosamine-specific EIICBA component|
           [Includes: Glucosamine permease IIC component (PTS
           system glucosamine-specific EIIC component);
           Glucosamine-specific phosphotransferase enzyme IIB
           component (EC 2.7.1.69) (PTS
          Length = 631

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 186 IFCAPAVGAAVAYLEEPAKSSRVPSILVGAS 94
           IFC PAV  A+ +   P K   +  +++ A+
Sbjct: 252 IFCLPAVALAIIHTARPEKKKMISGVMISAA 282

>C8AP2_HUMAN (Q9UKL3) CASP8-associated protein 2 (FLICE-associated huge protein)|
          Length = 1982

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 352 LRHLRPVKEAVGQVDPPVRAV 290
           L HLRP+ EA+  ++ PVR V
Sbjct: 847 LNHLRPIPEAISPLNSPVRPV 867

>ALB32_ARATH (Q8L718) Inner membrane ALBINO3-like protein 2, chloroplast|
          precursor (Ath5)
          Length = 525

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 1  THHILPSC*AEHAPLLHAPSPS 66
          +HH+ PS    H+P L +PSPS
Sbjct: 23 SHHLKPSSFISHSPPLFSPSPS 44

>DBP5_CRYNE (Q5KBP5) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)|
          Length = 546

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 107 WSERAPPLPQAQGWEGEGACSRGACSAQQEG 15
           W E AP  P   GW   GA + G+ +   +G
Sbjct: 63  WGEPAPSAPADNGWADAGASNGGSGANNNDG 93

>ZEP2_MOUSE (Q3UHF7) Human immunodeficiency virus type I enhancer-binding protein|
            2 homolog (Myc intron-binding protein 1) (MIBP-1)
          Length = 2430

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 125  AGCRASWSERAPPLPQAQGWEGEGAC 48
            AG RA+WS   PPLP     +  G C
Sbjct: 1105 AGLRAAWSSVLPPLPGDDPGKQVGTC 1130


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,837,758
Number of Sequences: 219361
Number of extensions: 657158
Number of successful extensions: 2484
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2484
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)