>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)|
           (Nepenthesin-I)
          Length = 437

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 267 YVVRAGLGSPAQPVLLALDTSADATCAHCSSC 362
           Y++   +G+PAQP    +DT +D     C  C
Sbjct: 95  YLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPC 126

>PTW3C_ECOLI (P09323) PTS system N-acetylglucosamine-specific EIICBA component|
           (EIICBA-Nag) (EII-Nag) [Includes: N-acetylglucosamine
           permease IIC component (PTS system
           N-acetylglucosamine-specific EIIC component);
           N-acetylglucosamine-specific phosphotrans
          Length = 648

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = +3

Query: 201 SSKAASTGVTSAPVASGQTPPSYVVRAGLGSPAQPVLLALDTSADATCA 347
           ++ A +T  T+APVA  Q  P+ V  A L SP    ++ALD   D   A
Sbjct: 473 AASAEATPATAAPVAKPQAVPNAVSIAELVSPITGDVVALDQVPDEAFA 521

>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)|
           (Ubiquitin-protein ligase COP1) (Constitutive
           photomorphogenesis protein 1 homolog) (mCOP1)
          Length = 733

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 15/62 (24%)
 Frame = +3

Query: 201 SSKAASTGVTSAPVASGQTPPSYVVRA---------------GLGSPAQPVLLALDTSAD 335
           SS A+S    S+ ++S  +PPS    A               GLG P +PVL+A   S  
Sbjct: 18  SSAASSVTSASSSLSSSPSPPSVAASAATLVSGGVAPAAGSGGLGGPGRPVLVAAAVSGS 77

Query: 336 AT 341
           A+
Sbjct: 78  AS 79

>LIMK1_DROME (Q8IR79) LIM domain kinase 1 (EC 2.7.11.1) (LIMK-1) (dLIMK)|
          Length = 1257

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 222 GVTSAPVASGQTPPSYVVRAGL-GSPAQPVLLALDTSADATCAHCSSC 362
           G  S PV+ G +P     R  L   P +P+++AL       C  CS C
Sbjct: 19  GAGSGPVSGGHSPLCAHCRGQLLPHPEEPIVMALGQQWHCDCFRCSVC 66

>PRD_DROME (P06601) Segmentation protein paired|
          Length = 613

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = +3

Query: 117 HNVHPASASPLESIISXXXXXXXXXXFLSSKAASTGVTSAPVA-SGQTPPSYVVRAGLGS 293
           H   P + SP ES+ S           LS+  +  GVTS+  A SG  P   +  A  GS
Sbjct: 407 HQTMPRNESPNESVSSAFGQLPPTPNSLSAVVSGAGVTSSSGANSGADPSQSLANASAGS 466

Query: 294 PAQPVLLALDT 326
                 L +++
Sbjct: 467 EELSAALKVES 477

>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)|
           (Ubiquitin-protein ligase COP1) (Constitutive
           photomorphogenesis protein 1 homolog) (hCOP1)
          Length = 731

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 15/54 (27%)
 Frame = +3

Query: 201 SSKAASTGVTSAPVASGQTPPSYVVRA---------------GLGSPAQPVLLA 317
           SS A+S    S+ ++S  +PPS  V A               GLG P +PVL+A
Sbjct: 18  SSAASSVTSASSSLSSSPSPPSVAVSAAALVSGGVAQAAGSGGLGGPVRPVLVA 71

>DP87_DICDI (Q04503) Prespore protein DP87 precursor|
          Length = 555

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +3

Query: 132 ASASPLESIISXXXXXXXXXXFLSSKAASTGVTSAPVASGQTPPSYVVRAGLGSPA 299
           AS+SP  S  S            SS A S+  +SAP ++  + PS    +   S A
Sbjct: 487 ASSSPSSSAASSAASSEPSSSAASSSAPSSASSSAPSSASSSAPSSSASSSAASSA 542

>YGZD_YEAST (P53057) Hypothetical protein YGL259W precursor|
          Length = 165

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
 Frame = +3

Query: 267 YVVRAGLGSPAQPVLLALDTSA------DATCAHCSS 359
           YVV+  +G+P Q V L LDT +      +A  A+C S
Sbjct: 67  YVVKMEIGTPPQTVYLQLDTGSSDMIVNNADIAYCKS 103

>PCX_DROME (P18490) Protein pecanex|
          Length = 3433

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 210  AASTGVTSAPVASGQTPPSYVVRAGLGSPAQPVLLA 317
            AA+ G +SAP  +G  PP+ V  A   S + P L A
Sbjct: 2375 AAAGGASSAPATAGVAPPAPVTPAHNDSKSTPNLSA 2410

>CARP_IRPLA (P17576) Polyporopepsin (EC 3.4.23.29) (Aspartic proteinase)|
          Length = 340

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
 Frame = +3

Query: 243 ASGQTPPS-----YVVRAGLGSPAQPVLLALDTSADAT 341
           A+G  P +     YVV  G+GSPA    L +DT +  T
Sbjct: 1   AAGSVPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNT 38


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.115    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,901,398
Number of Sequences: 219361
Number of extensions: 183673
Number of successful extensions: 633
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)