ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet98e06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 803 bits (405), Expect = 0.0 Identities = 407/408 (99%) Strand = Plus / Plus Query: 11 ctcggccattgtttctagtagtactagccaagccattgtttctagaagtaacagaggagg 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctcggccattgtttctagtagtactagccaagccattgtttctagaagtaacagaggagg 60 Query: 71 aggaagagaggccggcgaaatgaaggctaccgcgggggccctcctcgccgtggtggccac 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggaagagaggccggcgaaatgaaggctaccgcgggggccctcctcgccgtggtggccac 120 Query: 131 ggtgctactgcgaggcatcgcggcagcgccgccccggaagccggtggacgtgccattcga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggtgctactgcgaggcatcgcggcagcgccgccccggaagccggtggacgtgccattcga 180 Query: 191 gaagaactacgtcccgacatgggcggaggaccacatccactacgtgaacggcggacggga 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gaagaactacgtcccgacatgggcggaggaccacatccactacgtgaacggcggacggga 240 Query: 251 ggtgcagctgtccctcgacaagaccaccggcactggcttccagacccggngctcctacct 310 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 241 ggtgcagctgtccctcgacaagaccaccggcactggcttccagacccggggctcctacct 300 Query: 311 cttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcac 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcac 360 Query: 371 cgccttctacctgtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cgccttctacctgtcgtcgcagaactcggagcacgacgagatcgactt 408
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 502 bits (253), Expect = e-139 Identities = 336/363 (92%), Gaps = 7/363 (1%) Strand = Plus / Plus Query: 60 aacagaggaggaggaagagaggccggc----gaaatgaaggctaccgcgggggccctcct 115 ||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 10 aacagagaaggaggaagagaggccggccggcgaaatgaaggcgaccgcgggggccctcct 69 Query: 116 cgccgtggtggccacggtgctactgcgaggcatcgcggcagcgccgccccggaagccggt 175 |||||||||||| ||||||| || || ||| | ||||||||||| |||||||||||| Sbjct: 70 cgccgtggtggcggcggtgctgctacgcggcgtggcggcagcgcc---ccggaagccggt 126 Query: 176 ggacgtgccattcgagaagaactacgtcccgacatgggcggaggaccacatccactacgt 235 ||||||||| ||||| ||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 127 ggacgtgccgttcgacaagaactacgtgccgacgtgggcgcaggaccacatccactacgt 186 Query: 236 gaacggcggacgggaggtgcagctgtccctcgacaagaccaccggcactggcttccagac 295 ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 187 gaacggcgggcgggaggtgcagctgtccctggacaagaccaccggcacgggcttccagac 246 Query: 296 ccggngctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactc 355 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ccggggctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactc 306 Query: 356 cgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcga 415 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 307 cgccggcaccgtcaccgccttctacctgtcgtcacagaactcggagcacgacgagatcga 366 Query: 416 ctt 418 ||| Sbjct: 367 ctt 369
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 396 bits (200), Expect = e-107 Identities = 244/259 (94%) Strand = Plus / Plus Query: 160 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 219 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 101 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 160 Query: 220 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 279 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 161 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 220 Query: 280 gcactggcttccagacccggngctcctacctcttcggccacttcagcatgcacatcaagc 339 |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 221 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 280 Query: 340 tcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcagaactcgg 399 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 281 tcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcagaactcgg 340 Query: 400 agcacgacgagatcgactt 418 ||||||||||||||||||| Sbjct: 341 agcacgacgagatcgactt 359
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 396 bits (200), Expect = e-107 Identities = 244/259 (94%) Strand = Plus / Plus Query: 160 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 219 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 98 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 157 Query: 220 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 279 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 158 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 217 Query: 280 gcactggcttccagacccggngctcctacctcttcggccacttcagcatgcacatcaagc 339 |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 218 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 277 Query: 340 tcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcagaactcgg 399 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 278 tcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcagaactcgg 337 Query: 400 agcacgacgagatcgactt 418 ||||||||||||||||||| Sbjct: 338 agcacgacgagatcgactt 356
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 349 bits (176), Expect = 5e-93 Identities = 244/267 (91%) Strand = Plus / Plus Query: 151 cggcagcgccgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacat 210 |||| ||| |||| |||||||| ||||||||||| ||| ||||||||||||| ||||| | Sbjct: 112 cggcggcggcgcctcggaagcccgtggacgtgccgttccagaagaactacgtgccgacgt 171 Query: 211 gggcggaggaccacatccactacgtgaacggcggacgggaggtgcagctgtccctcgaca 270 ||||| ||||||||||||||||| | ||||||| |||||||||||||||| ||| |||| Sbjct: 172 gggcgcaggaccacatccactacatcgacggcgggcgggaggtgcagctgtacctggaca 231 Query: 271 agaccaccggcactggcttccagacccggngctcctacctcttcggccacttcagcatgc 330 || |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 232 agtccaccggcacgggcttccagacgcggggctcctacctcttcggccacttcagcatgc 291 Query: 331 acatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgc 390 |||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 292 acatgaagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctgtcgtcgc 351 Query: 391 agaactcggagcacgacgagatcgact 417 ||||||||||||||||||||||||||| Sbjct: 352 agaactcggagcacgacgagatcgact 378
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 321 bits (162), Expect = 1e-84 Identities = 206/221 (93%) Strand = Plus / Plus Query: 160 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 219 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 113137 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 113196 Query: 220 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 279 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 113197 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 113256 Query: 280 gcactggcttccagacccggngctcctacctcttcggccacttcagcatgcacatcaagc 339 |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 113257 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 113316 Query: 340 tcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 113317 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 113357 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 381 ctgtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||||||||||||||||||||||||||||||||||| Sbjct: 113453 ctgtcgtcgcagaactcggagcacgacgagatcgactt 113490
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 321 bits (162), Expect = 1e-84 Identities = 206/221 (93%) Strand = Plus / Plus Query: 160 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 219 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 12756 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 12815 Query: 220 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 279 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 12816 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 12875 Query: 280 gcactggcttccagacccggngctcctacctcttcggccacttcagcatgcacatcaagc 339 |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 12876 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 12935 Query: 340 tcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 12936 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 12976 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 381 ctgtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||||||||||||||||||||||||||||||||||| Sbjct: 13072 ctgtcgtcgcagaactcggagcacgacgagatcgactt 13109
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 321 bits (162), Expect = 1e-84 Identities = 206/221 (93%) Strand = Plus / Plus Query: 160 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 219 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 19009939 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 19009998 Query: 220 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 279 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 19009999 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 19010058 Query: 280 gcactggcttccagacccggngctcctacctcttcggccacttcagcatgcacatcaagc 339 |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 19010059 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 19010118 Query: 340 tcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 19010119 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 19010159 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 381 ctgtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||||||||||||||||||||||||||||||||||| Sbjct: 19010255 ctgtcgtcgcagaactcggagcacgacgagatcgactt 19010292
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 321 bits (162), Expect = 1e-84 Identities = 206/221 (93%) Strand = Plus / Plus Query: 160 cgccccggaagccggtggacgtgccattcgagaagaactacgtcccgacatgggcggagg 219 |||| |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||| Sbjct: 19168588 cgccgcggaagccggtggacgtggcgttcgagaagaactacgtgccgacgtgggcggagg 19168647 Query: 220 accacatccactacgtgaacggcggacgggaggtgcagctgtccctcgacaagaccaccg 279 ||||||||||||||||| ||||||| || ||||||||||| | |||||||||| |||||| Sbjct: 19168648 accacatccactacgtggacggcgggcgcgaggtgcagctctacctcgacaagtccaccg 19168707 Query: 280 gcactggcttccagacccggngctcctacctcttcggccacttcagcatgcacatcaagc 339 |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 19168708 gcaccggcttccagacccggggctcctacctcttcggccacttcagcatgcacatcaagc 19168767 Query: 340 tcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||| |||||||||||||||||| ||||||||||||||| Sbjct: 19168768 tcgtcgccggcgactccgccggcaccgtcaccgccttctac 19168808 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 381 ctgtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||||||||||||||||||||||||||||||||||| Sbjct: 19168904 ctgtcgtcgcagaactcggagcacgacgagatcgactt 19168941
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 103 bits (52), Expect = 4e-19 Identities = 129/155 (83%) Strand = Plus / Plus Query: 264 ctcgacaagaccaccggcactggcttccagacccggngctcctacctcttcggccacttc 323 |||||||||||| ||||| | ||||||||| || | || |||||||||||| | || Sbjct: 254 ctcgacaagacctccggctccggcttccagtccaagagcgagtacctcttcggcaagatc 313 Query: 324 agcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 383 |||||| |||||||||||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 314 gacatgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacctg 373 Query: 384 tcgtcgcagaactcggagcacgacgagatcgactt 418 ||||||||| ||| |||||||||||||||||| Sbjct: 374 tcgtcgcaggggacggcgcacgacgagatcgactt 408
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 99.6 bits (50), Expect = 7e-18 Identities = 101/118 (85%) Strand = Plus / Plus Query: 301 gctcctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccg 360 ||||||||||||||||||||||||| ||||| || ||||| || || |||||||| | Sbjct: 345 gctcctacctcttcggccacttcagtatgcagatgaagctggtgccaggggactccgcag 404 Query: 361 gcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgactt 418 | || |||||||| ||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 405 ggaccgtcaccgcattctatctgtcttcccagaactctgagcacgacgagatcgactt 462
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 385 |||||| |||||||||||| |||| ||||||||||||| |||||| ||||||||||||| Sbjct: 210 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtc 269 Query: 386 gtcgcagaactcggagcacgacgagatcgactt 418 ||||||| ||| |||||||||||||||||| Sbjct: 270 gtcgcaggggacggcgcacgacgagatcgactt 302
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 97.6 bits (49), Expect = 3e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 385 |||||| |||||||||||| |||| ||||||||||||| ||| || ||||||||||||| Sbjct: 310 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacctgtc 369 Query: 386 gtcgcagaactcggagcacgacgagatcgactt 418 ||||||| ||| ||||||||||||||||||| Sbjct: 370 gtcgcaggggtcgcagcacgacgagatcgactt 402
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 304 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 363 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 252 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 311 Query: 364 cagtcaccgccttctacct 382 | |||||| |||||||||| Sbjct: 312 ccgtcacctccttctacct 330
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 304 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 363 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 257 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 316 Query: 364 cagtcaccgccttctacct 382 | |||||| |||||||||| Sbjct: 317 ccgtcacctccttctacct 335
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 304 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 363 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 8321925 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 8321984 Query: 364 cagtcaccgccttctacct 382 | |||||| |||||||||| Sbjct: 8321985 ccgtcacctccttctacct 8322003 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccgcgggggccctcctcgcc 119 |||||||||||||||||||| Sbjct: 20214168 ccgcgggggccctcctcgcc 20214149
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 304 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 363 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 248 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 307 Query: 364 cagtcaccgccttctacct 382 | |||||| |||||||||| Sbjct: 308 ccgtcacctccttctacct 326
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 304 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 363 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 62034 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 62093 Query: 364 cagtcaccgccttctacct 382 | |||||| |||||||||| Sbjct: 62094 ccgtcacctccttctacct 62112
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 385 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| |||| Sbjct: 312 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtc 371 Query: 386 gtcgcag 392 ||||||| Sbjct: 372 gtcgcag 378
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 304 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 363 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 257 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 316 Query: 364 cagtcaccgccttctacct 382 | |||||| |||||||||| Sbjct: 317 ccgtcacctccttctacct 335
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 385 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| |||| Sbjct: 312 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtc 371 Query: 386 gtcgcag 392 ||||||| Sbjct: 372 gtcgcag 378
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 304 cctacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggca 363 ||||||| |||||| | |||||| | || || ||||||||||||||| |||||||||||| Sbjct: 252 cctacctgttcggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggca 311 Query: 364 cagtcaccgccttctacct 382 | |||||| |||||||||| Sbjct: 312 ccgtcacctccttctacct 330
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 306 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 365 ||||||| ||||| |||| |||||| ||||||||||| || |||||||||||||| Sbjct: 303 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 362 Query: 366 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgactt 418 ||| || ||||||| || ||||||||| ||| ||||||||||||||||||| Sbjct: 363 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgactt 415
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 306 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 365 ||||||| ||||| |||| |||||| ||||||||||| || |||||||||||||| Sbjct: 310 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 369 Query: 366 gtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgactt 418 ||| || ||||||| || ||||||||| ||| ||||||||||||||||||| Sbjct: 370 gtcgccaccttctatctttcgtcgcagggttcgcagcacgacgagatcgactt 422
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 336 aagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 383 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 281 aagctcgtcgacggcaactccgccggcacagtcacctccttctacctg 328
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 306 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 365 |||||||||||| | |||||| || | || ||||||||||||||| ||||||| || || Sbjct: 154 tacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgctgggact 213 Query: 366 gtcaccgccttctacctgtcgtc 388 |||||| ||||||||||| |||| Sbjct: 214 gtcacctccttctacctgacgtc 236
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtc 385 |||||| |||||| ||||| |||| ||||||||||||| |||||| |||||||| |||| Sbjct: 204 catgcagatcaagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtc 263 Query: 386 gtcgcag 392 ||||||| Sbjct: 264 gtcgcag 270
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 306 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 365 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 266 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 325 Query: 366 gtcaccgccttctacctgtcgtc 388 |||||| ||||||||||| |||| Sbjct: 326 gtcacctccttctacctgacgtc 348
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 306 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 365 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 254 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 313 Query: 366 gtcaccgccttctacctgtcgtc 388 |||||| ||||||||||| |||| Sbjct: 314 gtcacctccttctacctgacgtc 336
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 306 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 365 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 366 gtcaccgccttctacctgtcgtc 388 |||||| ||||||||||| |||| Sbjct: 315 gtcacctccttctacctgacgtc 337
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 306 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 365 ||||||| |||| | |||||| | || || |||||| |||||||| ||||||||||||| Sbjct: 255 tacctctacggcgagttcagcgtccagatgaagctcatcggcggcaactccgccggcacc 314 Query: 366 gtcaccgccttctacctgtcgtc 388 |||||| ||||||||||| |||| Sbjct: 315 gtcacctccttctacctgacgtc 337
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 334 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcag 392 ||||||||||| |||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 337 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactacttgtcgtcgcag 395
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 334 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcag 392 ||||||||||| |||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 327 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactacttgtcgtcgcag 385
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 69.9 bits (35), Expect = 6e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 352 actccgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgaga 411 ||||||||||||| |||||||||| |||||||||||||||| | | ||||||||||| Sbjct: 385 actccgccggcaccgtcaccgcctactacctgtcgtcgcagggcggcgcgcacgacgaga 444 Query: 412 tcgactt 418 ||||||| Sbjct: 445 tcgactt 451
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 306 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 365 |||||||||||| | |||||| || | || ||||||||||||||| ||||||| || || Sbjct: 327 tacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgctgggact 386 Query: 366 gtcaccgccttctacctgtcgtc 388 |||||| ||||||||||| |||| Sbjct: 387 gtcacctccttctacctgacgtc 409
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 334 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 393 ||||||||||| |||| |||| |||||||| || ||||||| |||||||||||||||| Sbjct: 263 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 322 Query: 394 actcggagcacgacgagatcgactt 418 || |||||||||||||||||| Sbjct: 323 gtccgacgcacgacgagatcgactt 347
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 336 aagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 383 |||||||||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 272 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 319
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 306 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 365 |||||||||||| | |||||| | | || |||||||||| |||| ||||||||||||| Sbjct: 259 tacctcttcggcgagttcagcgtccggatgaagctcgtcgacggcaactccgccggcacc 318 Query: 366 gtcaccgccttctacctgtcgtc 388 |||||| ||||||| ||| |||| Sbjct: 319 gtcacctccttctatctgacgtc 341
>gb|AY189971.1| Gossypium hirsutum xyloglucan endotransglycosylase mRNA, complete cds Length = 1369 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 322 tcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgcctt 376 |||||||| | ||||||||| || ||||||||||||||| |||||||||||||| Sbjct: 1251 tcagcatgaaaatcaagctcatccccggcgactccgccggaacagtcaccgcctt 1305 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 322 tcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgcctt 376 |||||||| | ||||||||| || ||||||||||||||| |||||||||||||| Sbjct: 311 tcagcatgaaaatcaagctcatccccggcgactccgccggaacagtcaccgcctt 365
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 28749764 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 334 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 ||||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 28773895 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 28773849 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||| |||||||||||| |||| ||||||||||||| ||| || |||||||| Sbjct: 28761544 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 28761598 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 381 ctgtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||||||||| ||| ||||||||||||||||||| Sbjct: 28761689 ctgtcgtcgcaggggtcgcagcacgacgagatcgactt 28761726 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgtcggcggcgactccgccg 360 |||||||||||||||||||| Sbjct: 11429792 cgtcggcggcgactccgccg 11429811
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 57539 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 334 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 ||||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 81670 tcaagctcgtccccggcaactccgccggcaccgtcaccgcctactac 81624 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||| |||||||||||| |||| ||||||||||||| ||| || |||||||| Sbjct: 69319 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 69373 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 381 ctgtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||||||||| ||| ||||||||||||||||||| Sbjct: 69464 ctgtcgtcgcaggggtcgcagcacgacgagatcgactt 69501
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||| |||||||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 150330 catgcagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||| |||||||||||| |||| ||||||||||||| ||| || |||||||| Sbjct: 162110 catgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 162164 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 381 ctgtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||||||||| ||| ||||||||||||||||||| Sbjct: 162255 ctgtcgtcgcaggggtcgcagcacgacgagatcgactt 162292
>dbj|D88413.1| Cotton mRNA for endo-xyloglucan transferase, clone CF101, partial cds Length = 1062 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 322 tcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgcctt 376 |||||||| | ||||||||| || ||||||||||||||| |||||||||||||| Sbjct: 194 tcagcatgaaaatcaagctcatccccggcgactccgccggaacagtcaccgcctt 248
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 371 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 234 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 279
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 371 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 141990 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 141945 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 328 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 150577 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 150525
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 371 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 30508613 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 30508568 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 328 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 30517200 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 30517148
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 371 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 317 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 272
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 326 catgcacatcaagctcgtcggcggcgactccgccggcacagtcacc 371 |||| ||||||||||||||| || ||||||||||||||| |||||| Sbjct: 297 catggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 342
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 354 tccgccggcacagtcaccgccttctacctgtcgt 387 ||||||||||| |||||||||| ||||||||||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgt 396
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 321 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 253 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 312
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 321 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 345 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 404
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 48.1 bits (24), Expect = 0.023 Identities = 63/76 (82%) Strand = Plus / Plus Query: 308 cctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagt 367 |||||||||| | ||||||||| | || ||||||||| |||||| || ||||||| || Sbjct: 243 cctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggt 302 Query: 368 caccgccttctacctg 383 | || ||||||||||| Sbjct: 303 cgccaccttctacctg 318
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 321 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 20676277 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 20676336
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 337 agctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 321 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 29027 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 29086
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 337 agctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 48.1 bits (24), Expect = 0.023 Identities = 39/44 (88%) Strand = Plus / Plus Query: 337 agctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||||||| |||| ||||||||||||| |||||| |||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 321 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 345 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 404
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 321 ttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 ||||||||| || ||||||||| |||| ||||||||||||| |||||||||| |||| Sbjct: 348 ttcagcatgaacctcaagctcgccggcaacgactccgccggcgtcgtcaccgcctactac 407
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 48.1 bits (24), Expect = 0.023 Identities = 63/76 (82%) Strand = Plus / Plus Query: 308 cctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcacagt 367 |||||||||| | ||||||||| | || ||||||||| |||||| || ||||||| || Sbjct: 311 cctcttcggcgagttcagcatggagatgaagctcgtccccggcgaatcgcccggcacggt 370 Query: 368 caccgccttctacctg 383 | || ||||||||||| Sbjct: 371 cgccaccttctacctg 386
>ref|NM_101028.2| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT1G11545 mRNA, complete cds Length = 1131 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 336 aagctcgtcggcggcgactccgccggc 362 ||||||||||| ||||||||||||||| Sbjct: 336 aagctcgtcggaggcgactccgccggc 362
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence Length = 168537 Score = 46.1 bits (23), Expect = 0.091 Identities = 23/23 (100%) Strand = Plus / Minus Query: 64 gaggaggaggaagagaggccggc 86 ||||||||||||||||||||||| Sbjct: 122700 gaggaggaggaagagaggccggc 122678
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 46.1 bits (23), Expect = 0.091 Identities = 56/67 (83%) Strand = Plus / Plus Query: 352 actccgccggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgaga 411 |||| |||||||| |||||| |||||||||| ||||| ||| | | | |||||||||| Sbjct: 399 actcagccggcaccgtcaccaccttctacctctcgtcccagggccccaaccacgacgaga 458 Query: 412 tcgactt 418 ||||||| Sbjct: 459 tcgactt 465
>gb|AC011661.5|AC011661 Genomic sequence for Arabidopsis thaliana BAC T23J18 from chromosome I, complete sequence Length = 84797 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Minus Query: 336 aagctcgtcggcggcgactccgccggc 362 ||||||||||| ||||||||||||||| Sbjct: 64437 aagctcgtcggaggcgactccgccggc 64411
>gb|AY088546.1| Arabidopsis thaliana clone 7729 mRNA, complete sequence Length = 1109 Score = 46.1 bits (23), Expect = 0.091 Identities = 26/27 (96%) Strand = Plus / Plus Query: 336 aagctcgtcggcggcgactccgccggc 362 ||||||||||| ||||||||||||||| Sbjct: 315 aagctcgtcggaggcgactccgccggc 341
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 46.1 bits (23), Expect = 0.091 Identities = 50/59 (84%) Strand = Plus / Plus Query: 360 ggcacagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgactt 418 ||||| |||||| |||||||||||||||| ||| | | |||||||||||||||||| Sbjct: 375 ggcacggtcaccaccttctacctgtcgtcccagggcgacgcgcacgacgagatcgactt 433
>emb|CR711857.2|CNS0GC7X Tetraodon nigroviridis full-length cDNA Length = 892 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 gaggaggaggaagagaggccgg 85 |||||||||||||||||||||| Sbjct: 576 gaggaggaggaagagaggccgg 597
>emb|CR718189.2|CNS0GH3N Tetraodon nigroviridis full-length cDNA Length = 891 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 64 gaggaggaggaagagaggccgg 85 |||||||||||||||||||||| Sbjct: 576 gaggaggaggaagagaggccgg 597
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 60 aacagaggaggaggaagagagg 81 |||||||||||||||||||||| Sbjct: 23162659 aacagaggaggaggaagagagg 23162680
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 44.1 bits (22), Expect = 0.36 Identities = 34/38 (89%) Strand = Plus / Plus Query: 352 actccgccggcacagtcaccgccttctacctgtcgtcg 389 ||||||| ||||| || ||| ||||||||||||||||| Sbjct: 383 actccgcgggcaccgtgacctccttctacctgtcgtcg 420
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 44.1 bits (22), Expect = 0.36 Identities = 61/74 (82%) Strand = Plus / Plus Query: 306 tacctcttcggccacttcagcatgcacatcaagctcgtcggcggcgactccgccggcaca 365 ||||||| ||||| |||| |||||| ||||||||||| || |||||||||||||| Sbjct: 193 tacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggcacc 252 Query: 366 gtcaccgccttcta 379 ||| || ||||||| Sbjct: 253 gtcgccaccttcta 266
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 60 aacagaggaggaggaagagagg 81 |||||||||||||||||||||| Sbjct: 23090850 aacagaggaggaggaagagagg 23090871
>emb|AL928753.3|CNS08CBQ Oryza sativa chromosome 12, . BAC OSJNBb0076G11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135323 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 aacagaggaggaggaagagagg 81 |||||||||||||||||||||| Sbjct: 15738 aacagaggaggaggaagagagg 15717
>ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT5G13870 (EXGT-A4) mRNA, complete cds Length = 1386 Score = 42.1 bits (21), Expect = 1.4 Identities = 122/156 (78%) Strand = Plus / Plus Query: 263 cctcgacaagaccaccggcactggcttccagacccggngctcctacctcttcggccactt 322 |||||||||| ||| ||||||||||| ||| || | |||||| | || |||||||| Sbjct: 568 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 627 Query: 323 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 382 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 628 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 687 Query: 383 gtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||| |||||||| || || || ||||| ||||| Sbjct: 688 gtcgtcccagaactcagaacatgatgagatagactt 723
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 328 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 212 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 264
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 gtaacagaggaggaggaagag 78 ||||||||||||||||||||| Sbjct: 71484 gtaacagaggaggaggaagag 71464
>gb|AC132391.3| Mus musculus BAC clone RP23-454N21 from chromosome 12, complete sequence Length = 178291 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 acagaggaggaggaagagagg 81 ||||||||||||||||||||| Sbjct: 99335 acagaggaggaggaagagagg 99355
>gb|AC151992.3| Mus musculus BAC clone RP23-212H13 from chromosome 8, complete sequence Length = 182428 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 acagaggaggaggaagagagg 81 ||||||||||||||||||||| Sbjct: 162052 acagaggaggaggaagagagg 162032
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 112 tcctcgccgtggtggccacggtgct 136 ||||||||||||||||| ||||||| Sbjct: 75420 tcctcgccgtggtggccgcggtgct 75396
>gb|AE005709.1| Caulobacter crescentus CB15 section 35 of 359 of the complete genome Length = 10538 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 tcctcgccgtggtggccacggtgct 136 |||| |||||||||||||||||||| Sbjct: 9397 tcctggccgtggtggccacggtgct 9421
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 328 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 284 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 336
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 gtaacagaggaggaggaagag 78 ||||||||||||||||||||| Sbjct: 18673708 gtaacagaggaggaggaagag 18673688
>emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1347 Score = 42.1 bits (21), Expect = 1.4 Identities = 122/156 (78%) Strand = Plus / Plus Query: 263 cctcgacaagaccaccggcactggcttccagacccggngctcctacctcttcggccactt 322 |||||||||| ||| ||||||||||| ||| || | |||||| | || |||||||| Sbjct: 568 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 627 Query: 323 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 382 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 628 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 687 Query: 383 gtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||| |||||||| || || || ||||| ||||| Sbjct: 688 gtcgtcccagaactcagaacatgatgagatagactt 723
>emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZF02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1362 Score = 42.1 bits (21), Expect = 1.4 Identities = 122/156 (78%) Strand = Plus / Plus Query: 263 cctcgacaagaccaccggcactggcttccagacccggngctcctacctcttcggccactt 322 |||||||||| ||| ||||||||||| ||| || | |||||| | || |||||||| Sbjct: 557 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 616 Query: 323 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 382 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 617 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 676 Query: 383 gtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||| |||||||| || || || ||||| ||||| Sbjct: 677 gtcgtcccagaactcagaacatgatgagatagactt 712
>gb|AC157949.1| Mus musculus BAC clone RP23-148A16 from chromosome 9, complete sequence Length = 204674 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 gaggaggaggaagagaggccg 84 ||||||||||||||||||||| Sbjct: 12874 gaggaggaggaagagaggccg 12894
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 104 gggggccctcctcgccgtggtggcc 128 ||||||||||||| ||||||||||| Sbjct: 1460587 gggggccctcctcaccgtggtggcc 1460611
>dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan transferase, complete cds, clone: RAFL23-11-K19 Length = 1028 Score = 42.1 bits (21), Expect = 1.4 Identities = 122/156 (78%) Strand = Plus / Plus Query: 263 cctcgacaagaccaccggcactggcttccagacccggngctcctacctcttcggccactt 322 |||||||||| ||| ||||||||||| ||| || | |||||| | || |||||||| Sbjct: 191 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 250 Query: 323 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 382 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 251 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 310 Query: 383 gtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||| |||||||| || || || ||||| ||||| Sbjct: 311 gtcgtcccagaactcagaacatgatgagatagactt 346
>emb|Z60540.1|HS27G11R H.sapiens CpG island DNA genomic Mse1 fragment, clone 27g11, reverse read cpg27g11.rt1a Length = 321 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 agaggaggaggaagagaggcc 83 ||||||||||||||||||||| Sbjct: 55 agaggaggaggaagagaggcc 75
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 328 tgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctac 380 |||| ||||||||||||| | | ||||||||||||| |||||| ||| |||| Sbjct: 302 tgcagatcaagctcgtcgccaacaactccgccggcacggtcaccacctgctac 354
>dbj|AP001858.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-959F10, complete sequence Length = 210723 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 agaggaggaggaagagaggcc 83 ||||||||||||||||||||| Sbjct: 46295 agaggaggaggaagagaggcc 46315
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 343 tcggcggcgactccgccggcacagtcacc 371 |||||||||||| ||||||||| |||||| Sbjct: 2481622 tcggcggcgacttcgccggcaccgtcacc 2481594
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 cgcgggggccctcctcgccgtggtg 125 |||||||||||||||||||| |||| Sbjct: 1592243 cgcgggggccctcctcgccgcggtg 1592219
>gb|AC134606.4| Mus musculus BAC clone RP23-52K6 from 9, complete sequence Length = 171495 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 gaggaggaggaagagaggccg 84 ||||||||||||||||||||| Sbjct: 118167 gaggaggaggaagagaggccg 118187
>dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxyloglucan transferase, complete cds Length = 1050 Score = 42.1 bits (21), Expect = 1.4 Identities = 122/156 (78%) Strand = Plus / Plus Query: 263 cctcgacaagaccaccggcactggcttccagacccggngctcctacctcttcggccactt 322 |||||||||| ||| ||||||||||| ||| || | |||||| | || |||||||| Sbjct: 211 cctcgacaagtacactggcactggctttcagtccaaaggttcctacttgtttggccactt 270 Query: 323 cagcatgcacatcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacct 382 ||| |||||||| ||| | || | || ||||| || || || || ||||||||||| | Sbjct: 271 cagtatgcacataaagatggttgctggtgactctgctggaactgtgaccgccttctattt 330 Query: 383 gtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||| |||||||| || || || ||||| ||||| Sbjct: 331 gtcgtcccagaactcagaacatgatgagatagactt 366
>ref|NM_188932.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2403 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ccgcgggggccctcctcgcc 119 |||||||||||||||||||| Sbjct: 425 ccgcgggggccctcctcgcc 444
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 40.1 bits (20), Expect = 5.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 355 ccgccggcacagtcaccgccttctacctgtcg 386 |||||||||| ||||||||||||||||||| Sbjct: 305 ccgccggcaccaacaccgccttctacctgtcg 336
>ref|XM_958677.1| Neurospora crassa OR74A hypothetical protein (NCU07476.1) partial mRNA Length = 2763 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agaggaggaggaagagaggc 82 |||||||||||||||||||| Sbjct: 135 agaggaggaggaagagaggc 116
>ref|XM_327761.1| Neurospora crassa OR74A hypothetical protein (NCU07476.1) partial mRNA Length = 2763 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agaggaggaggaagagaggc 82 |||||||||||||||||||| Sbjct: 135 agaggaggaggaagagaggc 116
>gb|AC146238.2| Pan troglodytes BAC clone CH251-170A15 from Y, complete sequence Length = 169552 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agtactagccaagccattgt 49 |||||||||||||||||||| Sbjct: 46674 agtactagccaagccattgt 46693
>gb|AC120408.7| Mus musculus chromosome 5, clone RP24-433N14, complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agaggaggaggaagagaggc 82 |||||||||||||||||||| Sbjct: 129665 agaggaggaggaagagaggc 129646
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 aacagaggaggaggaagaga 79 |||||||||||||||||||| Sbjct: 33448951 aacagaggaggaggaagaga 33448932
>gb|AC154710.2| Mus musculus BAC clone RP24-357L12 from chromosome 14, complete sequence Length = 163421 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gaggaggaggaagagaggcc 83 |||||||||||||||||||| Sbjct: 22965 gaggaggaggaagagaggcc 22946
>gb|AC005247.2| Homo sapiens PAC clone RP4-740L10 from 7, complete sequence Length = 124096 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ggaggaggaagagaggccgg 85 |||||||||||||||||||| Sbjct: 110181 ggaggaggaagagaggccgg 110162
>ref|XM_765087.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_572_37861_37058) partial mRNA Length = 804 Score = 40.1 bits (20), Expect = 5.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 288 ttccagacccggngctcctacct 310 |||||||||||| |||||||||| Sbjct: 436 ttccagacccggagctcctacct 458
>gb|AC159294.2| Mus musculus BAC clone RP23-287I15 from chromosome 12, complete sequence Length = 226841 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cagaggaggaggaagagagg 81 |||||||||||||||||||| Sbjct: 105189 cagaggaggaggaagagagg 105170
>gb|AC069067.17| Homo sapiens 3 BAC RP11-454C18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172213 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cagaggaggaggaagagagg 81 |||||||||||||||||||| Sbjct: 29897 cagaggaggaggaagagagg 29878
>ref|NM_001030710.1| Gallus gallus similar to MGC68830 protein (LOC417509), mRNA Length = 3031 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agaggaggaggaagagaggc 82 |||||||||||||||||||| Sbjct: 2725 agaggaggaggaagagaggc 2706
>ref|NM_001015912.1| Xenopus tropicalis CDC37 cell division cycle 37 homolog (S. cerevisiae) (cdc37), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 agaagtaacagaggaggaggaaga 77 ||||||||||||||||||| |||| Sbjct: 463 agaagtaacagaggaggagaaaga 486
>emb|BX294146.1| Pirellula sp. strain 1 complete genome; segment 14/24 Length = 324450 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 cgtcgcagaactcggagcac 404 |||||||||||||||||||| Sbjct: 236361 cgtcgcagaactcggagcac 236342
>emb|BX323026.5| Mouse DNA sequence from clone RP24-95F14 on chromosome 11 Contains the Ppm1d gene for magnesium-dependent protein phosphatase 1D delta isoform, the 5' end of the Bcas3 gene for breast carcinoma amplified sequence 3 and a CpG island, complete sequence Length = 130030 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gggaggtgcagctgtccctc 266 |||||||||||||||||||| Sbjct: 3014 gggaggtgcagctgtccctc 3033
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cagaggaggaggaagagagg 81 |||||||||||||||||||| Sbjct: 76776 cagaggaggaggaagagagg 76795
>emb|AJ719622.1| Gallus gallus mRNA for hypothetical protein, clone 4k12 Length = 3031 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agaggaggaggaagagaggc 82 |||||||||||||||||||| Sbjct: 2725 agaggaggaggaagagaggc 2706
>dbj|BS000585.1| Pan troglodytes chromosome Y clone:PTB-582H02, complete sequence Length = 140513 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agtactagccaagccattgt 49 |||||||||||||||||||| Sbjct: 84755 agtactagccaagccattgt 84774
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agtactagccaagccattgt 49 |||||||||||||||||||| Sbjct: 20127228 agtactagccaagccattgt 20127209
>gb|AC105401.5| Homo sapiens BAC clone RP11-765K14 from 4, complete sequence Length = 30064 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 acagaggaggaggaagagag 80 |||||||||||||||||||| Sbjct: 11735 acagaggaggaggaagagag 11754
>gb|AC087258.14| Homo sapiens 12p BAC RP11-686N4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127018 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 taacagaggaggaggaagag 78 |||||||||||||||||||| Sbjct: 10039 taacagaggaggaggaagag 10020
>emb|CR522991.1| Gallus gallus finished cDNA, clone ChEST799i23 Length = 993 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 agaggaggaggaagagaggc 82 |||||||||||||||||||| Sbjct: 962 agaggaggaggaagagaggc 943
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 aacagaggaggaggaagaga 79 |||||||||||||||||||| Sbjct: 49160 aacagaggaggaggaagaga 49179
>gb|AC123660.8| Mus musculus chromosome 3, clone RP23-196E24, complete sequence Length = 211632 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 taacagaggaggaggaagag 78 |||||||||||||||||||| Sbjct: 52307 taacagaggaggaggaagag 52326
>gb|AC017016.5|AC017016 Homo sapiens BAC clone RP11-152H13 from 3, complete sequence Length = 180681 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cagaggaggaggaagagagg 81 |||||||||||||||||||| Sbjct: 140318 cagaggaggaggaagagagg 140337
>gb|AC006435.7|AC006435 Homo sapiens chromosome 17, clone RP5-59D14, complete sequence Length = 139267 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cagaggaggaggaagagagg 81 |||||||||||||||||||| Sbjct: 135775 cagaggaggaggaagagagg 135756
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 aacagaggaggaggaagaga 79 |||||||||||||||||||| Sbjct: 33539461 aacagaggaggaggaagaga 33539442
>gb|AC010972.3|AC010972 Homo sapiens clone RP11-133D3, complete sequence Length = 114637 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agtactagccaagccattgt 49 |||||||||||||||||||| Sbjct: 84150 agtactagccaagccattgt 84169
>gb|AC147710.3| Pan troglodytes BAC clone CH251-473C15 from chromosome y, complete sequence Length = 200403 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agtactagccaagccattgt 49 |||||||||||||||||||| Sbjct: 181072 agtactagccaagccattgt 181091
>gb|AC112666.9| Mus musculus chromosome 3, clone RP24-119D5, complete sequence Length = 193302 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 taacagaggaggaggaagag 78 |||||||||||||||||||| Sbjct: 114435 taacagaggaggaggaagag 114454
>gb|AF515607.1| Populus tremula x Populus tremuloides xyloglucan endotransglycosylase precursor (XET16A) mRNA, complete cds Length = 1267 Score = 40.1 bits (20), Expect = 5.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 363 acagtcaccgccttctacctgtcgtcgcagaactcggagcacgacgagatcgactt 418 |||||||| || ||||| || || || || ||||||||||| |||||||| ||||| Sbjct: 336 acagtcactgctttctatctatcctcacaaaactcggagcatgacgagatagactt 391
>gb|AC015799.23| Homo sapiens chromosome 17, clone RP11-135N5, complete sequence Length = 180157 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cagaggaggaggaagagagg 81 |||||||||||||||||||| Sbjct: 179480 cagaggaggaggaagagagg 179499
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgtcggcggcgactccgccg 360 |||||||||||||||||||| Sbjct: 117501 cgtcggcggcgactccgccg 117520
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ccgcgggggccctcctcgcc 119 |||||||||||||||||||| Sbjct: 79954 ccgcgggggccctcctcgcc 79935
>dbj|AK106075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H11, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgtcggcggcgactccgccg 360 |||||||||||||||||||| Sbjct: 657 cgtcggcggcgactccgccg 676
>dbj|AK099262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G05, full insert sequence Length = 1371 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgtcggcggcgactccgccg 360 |||||||||||||||||||| Sbjct: 669 cgtcggcggcgactccgccg 688
>dbj|AK070763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066M03, full insert sequence Length = 1378 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 cgtcggcggcgactccgccg 360 |||||||||||||||||||| Sbjct: 694 cgtcggcggcgactccgccg 713
>dbj|AK068398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151L03, full insert sequence Length = 1100 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 aacagaggaggaggaagaga 79 |||||||||||||||||||| Sbjct: 77 aacagaggaggaggaagaga 58
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 acagaggaggaggaagagag 80 |||||||||||||||||||| Sbjct: 613900 acagaggaggaggaagagag 613881
>emb|CR926424.1| Xenopus tropicalis finished cDNA, clone TGas127m02 Length = 1875 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 agaagtaacagaggaggaggaaga 77 ||||||||||||||||||| |||| Sbjct: 463 agaagtaacagaggaggagaaaga 486
>gb|AC159104.2| Mus musculus BAC clone RP23-246E2 from chromosome 13, complete sequence Length = 203694 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 cagaggaggaggaagagagg 81 |||||||||||||||||||| Sbjct: 15108 cagaggaggaggaagagagg 15089
>gb|AC154246.3| Mus musculus BAC clone RP24-329G5 from chromosome 13, complete sequence Length = 177214 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cagaggaggaggaagagagg 81 |||||||||||||||||||| Sbjct: 110726 cagaggaggaggaagagagg 110745
>gb|AC111084.12| Mus musculus chromosome 7, clone RP23-143J24, complete sequence Length = 205564 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gaggaggaggaagagaggcc 83 |||||||||||||||||||| Sbjct: 136788 gaggaggaggaagagaggcc 136769
>gb|AC105298.21| Mus musculus strain C57BL/6J chromosome 5 clone rp23-224j9, complete sequence Length = 258789 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 agaggaggaggaagagaggc 82 |||||||||||||||||||| Sbjct: 180560 agaggaggaggaagagaggc 180579
>gb|AC141560.4| Mus musculus BAC clone RP23-425A5 from 12, complete sequence Length = 196665 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 agaggaggaggaagagaggccggc 86 |||||||||||| ||||||||||| Sbjct: 98156 agaggaggaggaggagaggccggc 98133
>emb|CT010516.6| Mouse DNA sequence from clone RP23-276H24 on chromosome 14, complete sequence Length = 194815 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gaggaggaggaagagaggcc 83 |||||||||||||||||||| Sbjct: 187557 gaggaggaggaagagaggcc 187538
>gb|AC134670.3| Homo sapiens chromosome 17, clone CTD-2283G11, complete sequence Length = 36100 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 cagaggaggaggaagagagg 81 |||||||||||||||||||| Sbjct: 21478 cagaggaggaggaagagagg 21497 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,464,714 Number of Sequences: 3902068 Number of extensions: 3464714 Number of successful extensions: 131082 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 129796 Number of HSP's gapped (non-prelim): 1274 length of query: 418 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 396 effective length of database: 17,147,199,772 effective search space: 6790291109712 effective search space used: 6790291109712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
