ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet98e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 575 e-161
2ref|XM_475074.1| Oryza sativa (japonica cultivar-group), predic... 56 6e-05
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 6e-05
4dbj|AK108350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 6e-05
5gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome... 56 6e-05
6emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genom... 48 0.016
7emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in ... 46 0.061
8ref|NM_166068.1| Drosophila melanogaster CG10151-RB, transcript ... 44 0.24
9ref|NM_166067.1| Drosophila melanogaster CG10151-RA, transcript ... 44 0.24
10ref|NM_137140.2| Drosophila melanogaster CG10151-RC, transcript ... 44 0.24
11gb|AC007580.6| Drosophila melanogaster, chromosome 2R, region 50... 44 0.24
12gb|AY047541.1| Drosophila melanogaster GH05433 full length cDNA 44 0.24
13gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, r... 44 0.24
14gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37... 44 0.24
15gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.24
16ref|XM_463441.1| Oryza sativa (japonica cultivar-group), predic... 42 0.96
17ref|XM_470327.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.96
18ref|XM_506907.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 0.96
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.96
20gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genom... 42 0.96
21gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete s... 42 0.96
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
23dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
24dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
25dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
26dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
27dbj|AK122112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.96
28dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.96
29ref|XM_483633.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.8
30ref|NM_194771.1| Oryza sativa (japonica cultivar-group) putative... 40 3.8
31gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 3.8
32ref|XM_543034.2| PREDICTED: Canis familiaris similar to Solute c... 40 3.8
33gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8
34gb|AC117428.3| Homo sapiens 3 BAC RP11-66P11 (Roswell Park Cance... 40 3.8
35gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Can... 40 3.8
36gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, c... 40 3.8
37gb|AF441442.1|AF441442 Serratia marcescens apoquinoprotein gluco... 40 3.8
38dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
39dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
40dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
41dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
42dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
43dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
44gb|AC003991.1|AC003991 Human BAC clone CTB-167B5 from 7q21, comp... 40 3.8
45emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 3.8
46dbj|AK061056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.8
47gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, ... 40 3.8
48gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.8
49gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipie... 40 3.8 
>dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-A09, full
           insert sequence
          Length = 1094

 Score =  575 bits (290), Expect = e-161
 Identities = 290/290 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcatgcaaacaaatcactagcgagccgcatacatcacatcacaaacgaagcgcggcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgcatgcaaacaaatcactagcgagccgcatacatcacatcacaaacgaagcgcggcac 60

                                                                       
Query: 61  gcaatggcgccctcctcgtcgtctccactgccggcgtctccgctgctcgtgctgctgatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcaatggcgccctcctcgtcgtctccactgccggcgtctccgctgctcgtgctgctgatg 120

                                                                       
Query: 121 gtgccgctcctgctcgccatggcgcgtccgtgctccggcgtggacgccatcggcacctac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgccgctcctgctcgccatggcgcgtccgtgctccggcgtggacgccatcggcacctac 180

                                                                       
Query: 181 tgcgctaagaacggcaccagcgcggagacgcaggccagcatcgaccaggtcctcgcggcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgcgctaagaacggcaccagcgcggagacgcaggccagcatcgaccaggtcctcgcggcg 240

                                                             
Query: 241 ctcgtcccgcgcgcctcggcggcgtactacgccacggccaccgccggccg 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcgtcccgcgcgcctcggcggcgtactacgccacggccaccgccggccg 290
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>ref|XM_475074.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 247 ccgcgcgcctcggcggcgtactacgccacggccaccgccggccg 290
           ||||||||||| || |  ||||||||||||||||||||||||||
Sbjct: 178 ccgcgcgcctccgccggctactacgccacggccaccgccggccg 221
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 247    ccgcgcgcctcggcggcgtactacgccacggccaccgccggccg 290
              ||||||||||| || |  ||||||||||||||||||||||||||
Sbjct: 660211 ccgcgcgcctccgccggctactacgccacggccaccgccggccg 660168
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>dbj|AK108350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B11, full
           insert sequence
          Length = 1008

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 247 ccgcgcgcctcggcggcgtactacgccacggccaccgccggccg 290
           ||||||||||| || |  ||||||||||||||||||||||||||
Sbjct: 217 ccgcgcgcctccgccggctactacgccacggccaccgccggccg 260
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>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0041A22, complete sequence
          Length = 117919

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 247  ccgcgcgcctcggcggcgtactacgccacggccaccgccggccg 290
            ||||||||||| || |  ||||||||||||||||||||||||||
Sbjct: 5410 ccgcgcgcctccgccggctactacgccacggccaccgccggccg 5367
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>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16
          Length = 349841

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 251    gcgcctcggcggcgtactacgccacggccacc 282
              |||| |||||||||||||||||| ||||||||
Sbjct: 252296 gcgcatcggcggcgtactacgccgcggccacc 252327
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>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25,
             complete sequence
          Length = 169168

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 112   ctgctgatggtgccgctcctgctcgcc 138
             ||||||||||||||||| |||||||||
Sbjct: 64654 ctgctgatggtgccgctgctgctcgcc 64628
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>ref|NM_166068.1| Drosophila melanogaster CG10151-RB, transcript variant B (CG10151),
            mRNA
          Length = 2463

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 109  gtgctgctgatggtgccgctcctgct 134
            |||||||||||||||| |||||||||
Sbjct: 1866 gtgctgctgatggtgctgctcctgct 1841
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>ref|NM_166067.1| Drosophila melanogaster CG10151-RA, transcript variant A (CG10151),
            mRNA
          Length = 2212

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 109  gtgctgctgatggtgccgctcctgct 134
            |||||||||||||||| |||||||||
Sbjct: 1615 gtgctgctgatggtgctgctcctgct 1590
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>ref|NM_137140.2| Drosophila melanogaster CG10151-RC, transcript variant C (CG10151),
            mRNA
          Length = 2766

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 109  gtgctgctgatggtgccgctcctgct 134
            |||||||||||||||| |||||||||
Sbjct: 2169 gtgctgctgatggtgctgctcctgct 2144
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>gb|AC007580.6| Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone
              BACR07P02, complete sequence
          Length = 160920

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 109    gtgctgctgatggtgccgctcctgct 134
              |||||||||||||||| |||||||||
Sbjct: 152966 gtgctgctgatggtgctgctcctgct 152991
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>gb|AY047541.1| Drosophila melanogaster GH05433 full length cDNA
          Length = 2337

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 109  gtgctgctgatggtgccgctcctgct 134
            |||||||||||||||| |||||||||
Sbjct: 1626 gtgctgctgatggtgctgctcctgct 1601
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>gb|AC010578.5|AC010578 Drosophila melanogaster, chromosome 2R, region 51B-51C, BAC clone
             BACR03K23, complete sequence
          Length = 160346

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 109   gtgctgctgatggtgccgctcctgct 134
             |||||||||||||||| |||||||||
Sbjct: 30635 gtgctgctgatggtgctgctcctgct 30660
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>gb|AE003813.3| Drosophila melanogaster chromosome 2R, section 37 of 73 of the complete
              sequence
          Length = 266851

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 109    gtgctgctgatggtgccgctcctgct 134
              |||||||||||||||| |||||||||
Sbjct: 122978 gtgctgctgatggtgctgctcctgct 123003
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 46      aacgaagcgcggcacgcaatggcgcc 71
               ||||||||||| ||||||||||||||
Sbjct: 2717742 aacgaagcgcgacacgcaatggcgcc 2717717
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>ref|XM_463441.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1662

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 270 cgccacggccaccgccggccg 290
           |||||||||||||||||||||
Sbjct: 339 cgccacggccaccgccggccg 319
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>ref|XM_470327.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4045

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 239 cgctcgtcccgcgcgcctcgg 259
           |||||||||||||||||||||
Sbjct: 122 cgctcgtcccgcgcgcctcgg 142
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>ref|XM_506907.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0096I06.18
           patrial mRNA
          Length = 4167

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 239 cgctcgtcccgcgcgcctcgg 259
           |||||||||||||||||||||
Sbjct: 122 cgctcgtcccgcgcgcctcgg 142
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 239      cgctcgtcccgcgcgcctcgg 259
                |||||||||||||||||||||
Sbjct: 34781007 cgctcgtcccgcgcgcctcgg 34781027
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>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete
             sequence
          Length = 164352

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 239   cgctcgtcccgcgcgcctcgg 259
             |||||||||||||||||||||
Sbjct: 81643 cgctcgtcccgcgcgcctcgg 81623
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>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence
          Length = 634917

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 210    gcaggccagcatcgaccaggtcctc 234
              ||||||||||||||||||| |||||
Sbjct: 601378 gcaggccagcatcgaccagatcctc 601402
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 77       cgtcgtctccactgccggcgt 97
                |||||||||||||||||||||
Sbjct: 29537375 cgtcgtctccactgccggcgt 29537355
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 239      cgctcgtcccgcgcgcctcgg 259
                |||||||||||||||||||||
Sbjct: 34871079 cgctcgtcccgcgcgcctcgg 34871099
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 270      cgccacggccaccgccggccg 290
                |||||||||||||||||||||
Sbjct: 32014984 cgccacggccaccgccggccg 32015004
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>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0512C01
          Length = 176261

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 270   cgccacggccaccgccggccg 290
             |||||||||||||||||||||
Sbjct: 56798 cgccacggccaccgccggccg 56818
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>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0655A07
          Length = 172473

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 77     cgtcgtctccactgccggcgt 97
              |||||||||||||||||||||
Sbjct: 101881 cgtcgtctccactgccggcgt 101861
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>dbj|AK122112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127O09, full
           insert sequence
          Length = 2366

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 270 cgccacggccaccgccggccg 290
           |||||||||||||||||||||
Sbjct: 676 cgccacggccaccgccggccg 656
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>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0460E08
          Length = 170021

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 270    cgccacggccaccgccggccg 290
              |||||||||||||||||||||
Sbjct: 111711 cgccacggccaccgccggccg 111731
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>ref|XM_483633.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1327

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 123 gccgctcctgctcgccatggcgcg 146
           |||||| |||||||||||||||||
Sbjct: 95  gccgctgctgctcgccatggcgcg 72
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>ref|NM_194771.1| Oryza sativa (japonica cultivar-group) putative receptor-like
           protein kinase 4 (OSJNBa0087H07.8), mRNA
          Length = 1923

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 270 cgccacggccaccgccggcc 289
           ||||||||||||||||||||
Sbjct: 171 cgccacggccaccgccggcc 190
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    ccgctgctcgtgctgctgat 119
              ||||||||||||||||||||
Sbjct: 167055 ccgctgctcgtgctgctgat 167036
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>ref|XM_543034.2| PREDICTED: Canis familiaris similar to Solute carrier family 13,
           member 3 (Sodium-dependent high-affinity dicarboxylate
           transporter 2) (Na(+)/dicarboxylate cotransporter 3)
           (NaDC-3) (hNaDC3) (LOC485910), mRNA
          Length = 1806

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 102 gctgctcgtgctgctgatggtgccgctc 129
           |||||||||||||||| ||| |||||||
Sbjct: 48  gctgctcgtgctgctgttggcgccgctc 75
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     cgccacggccaccgccggcc 289
               ||||||||||||||||||||
Sbjct: 2231070 cgccacggccaccgccggcc 2231051
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>gb|AC117428.3| Homo sapiens 3 BAC RP11-66P11 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 12446

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    tgcatgcaaacaaatcacta 21
            ||||||||||||||||||||
Sbjct: 1760 tgcatgcaaacaaatcacta 1779
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>gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169964

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      tgcatgcaaacaaatcacta 21
              ||||||||||||||||||||
Sbjct: 169725 tgcatgcaaacaaatcacta 169744
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>gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, complete sequence
          Length = 156654

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   cgccacggccaccgccggcc 289
             ||||||||||||||||||||
Sbjct: 56724 cgccacggccaccgccggcc 56705
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>gb|AF441442.1|AF441442 Serratia marcescens apoquinoprotein glucose dehydrogenase (GCD) gene,
            complete sequence; and unknown genes
          Length = 7718

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  gtgctgctgatggtgccgct 128
            ||||||||||||||||||||
Sbjct: 5917 gtgctgctgatggtgccgct 5936
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     cgccacggccaccgccggcc 289
               ||||||||||||||||||||
Sbjct: 2231070 cgccacggccaccgccggcc 2231051
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 80      cgtctccactgccggcgtctccgctgct 107
               |||| |||| ||||||||||||||||||
Sbjct: 4561958 cgtcgccaccgccggcgtctccgctgct 4561985



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 80      cgtctccactgccggcgtctccgctgct 107
               |||| |||| ||||||||||||||||||
Sbjct: 4551967 cgtcgccaccgccggcgtctccgctgct 4551994
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 123      gccgctcctgctcgccatggcgcg 146
                |||||| |||||||||||||||||
Sbjct: 27371603 gccgctgctgctcgccatggcgcg 27371626
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>dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0681H07
          Length = 144722

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 80    cgtctccactgccggcgtctccgctgct 107
             |||| |||| ||||||||||||||||||
Sbjct: 14827 cgtcgccaccgccggcgtctccgctgct 14854



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 80   cgtctccactgccggcgtctccgctgct 107
            |||| |||| ||||||||||||||||||
Sbjct: 4836 cgtcgccaccgccggcgtctccgctgct 4863
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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0638A12
          Length = 140731

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 80     cgtctccactgccggcgtctccgctgct 107
              |||| |||| ||||||||||||||||||
Sbjct: 105332 cgtcgccaccgccggcgtctccgctgct 105359



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 80    cgtctccactgccggcgtctccgctgct 107
             |||| |||| ||||||||||||||||||
Sbjct: 95341 cgtcgccaccgccggcgtctccgctgct 95368
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>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 123   gccgctcctgctcgccatggcgcg 146
             |||||| |||||||||||||||||
Sbjct: 73130 gccgctgctgctcgccatggcgcg 73153
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>gb|AC003991.1|AC003991 Human BAC clone CTB-167B5 from 7q21, complete sequence
          Length = 118313

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   gtgctgctgatggtgccgct 128
             ||||||||||||||||||||
Sbjct: 94972 gtgctgctgatggtgccgct 94991
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 234     cgcggcgctcgtcccgcgcgcctc 257
               |||||||||||| |||||||||||
Sbjct: 1389770 cgcggcgctcgttccgcgcgcctc 1389747
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>dbj|AK061056.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-H06, full
           insert sequence
          Length = 1327

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 123 gccgctcctgctcgccatggcgcg 146
           |||||| |||||||||||||||||
Sbjct: 95  gccgctgctgctcgccatggcgcg 72
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>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds;
             chivosazol biosynthetic gene cluster, complete sequence;
             and hypothetical protein gene, complete cds
          Length = 96547

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    ctgccggcgtctccgctgct 107
             ||||||||||||||||||||
Sbjct: 21719 ctgccggcgtctccgctgct 21738
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     cgccacggccaccgccggcc 289
               ||||||||||||||||||||
Sbjct: 2231021 cgccacggccaccgccggcc 2231002
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>gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940126D9, complete sequence
          Length = 125236

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   actacgccacggccaccgcc 285
             ||||||||||||||||||||
Sbjct: 73171 actacgccacggccaccgcc 73152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,727,940
Number of Sequences: 3902068
Number of extensions: 1727940
Number of successful extensions: 41792
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41170
Number of HSP's gapped (non-prelim): 622
length of query: 290
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 268
effective length of database: 17,147,199,772
effective search space: 4595449538896
effective search space used: 4595449538896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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