ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet98d12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMWG0701.uni Length = 312 Score = 529 bits (267), Expect = e-147 Identities = 274/275 (99%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 14 tcagtcgcagcagcagccgcacatcagcagcttgctctgttccatccggcagcaagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 tcagtcgcagcagcagccgcacatcagcagcttgctctgttccatccggcagcaagcaat 61 Query: 74 ggcggccacgaccatggcgctctcctcccccgcgatgaagctcgccggagcctcgtacgt 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ggcggccacgaccatggcgctctcctcccccgcgatgaagctcgccggagcctcgtacgt 121 Query: 134 cctcggcggcggccgcatcaccatgcgcaagaccgcggccaaggctgccacctccagcag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 cctcggcggcggccgcatcaccatgcgcaagaccgcggccaaggctgccacctccagcag 181 Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccgag 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccgag 241 Query: 254 ctacctcagcggcgagttcccgggcgattacggct 288 |||||||||||||||||| |||||||||||||||| Sbjct: 242 ctacctcagcggcgagtt-ccgggcgattacggct 275
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 10793123 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 10793182 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||||| |||||||||||||||||| ||||| Sbjct: 10793183 agctacctcaccggcgagttcccgggcgactacgg 10793217 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 10793072 atcaccatgcgcaagaccgc 10793091 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 10792997 accatggcgctctcctcccc 10793016
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 16846 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 16905 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||||| |||||||||||||||||| ||||| Sbjct: 16906 agctacctcaccggcgagttcccgggcgactacgg 16940 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 16795 atcaccatgcgcaagaccgc 16814 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 16720 accatggcgctctcctcccc 16739
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 129741 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 129800 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||||| |||||||||||||||||| ||||| Sbjct: 129801 agctacctcaccggcgagttcccgggcgactacgg 129835 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 129690 atcaccatgcgcaagaccgc 129709 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 129615 accatggcgctctcctcccc 129634
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 191 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 250 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||||| |||||||||||||||||| ||||| Sbjct: 251 agctacctcaccggcgagttcccgggcgactacgg 285 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 140 atcaccatgcgcaagaccgc 159 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 65 accatggcgctctcctcccc 84
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 255 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||||| |||||||||||||||||| ||||| Sbjct: 256 agctacctcaccggcgagttcccgggcgactacgg 290 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 145 atcaccatgcgcaagaccgc 164 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 70 accatggcgctctcctcccc 89
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 198 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 257 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||||| |||||||||||||||||| ||||| Sbjct: 258 agctacctcaccggcgagttcccgggcgactacgg 292 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 147 atcaccatgcgcaagaccgc 166 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 72 accatggcgctctcctcccc 91
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 255 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||||| |||||||||||||||||| ||||| Sbjct: 256 agctacctcaccggcgagttcccgggcgactacgg 290 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 145 atcaccatgcgcaagaccgc 164 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 70 accatggcgctctcctcccc 89
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 255 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||||| |||||||||||||||||| ||||| Sbjct: 256 agctacctcaccggcgagttcccgggcgactacgg 290 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 145 atcaccatgcgcaagaccgc 164 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 70 accatggcgctctcctcccc 89
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 149 bits (75), Expect = 6e-33 Identities = 90/95 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 177 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctccggcgagccgccg 236 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||||| |||||||||||||||||| ||||| Sbjct: 237 agctacctcaccggcgagttcccgggcgactacgg 271 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 126 atcaccatgcgcaagaccgc 145 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 51 accatggcgctctcctcccc 70
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 145 bits (73), Expect = 9e-32 Identities = 91/97 (93%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 203 gcagcccgtggtacgggtccgaccgcgtgctctacctcggcccgctctccggcgaccccc 262 Query: 250 cgagctacctcagcggcgagttcccgggcgattacgg 286 |||||||||||| |||||||||||| ||||| ||||| Sbjct: 263 cgagctacctcaccggcgagttccccggcgactacgg 299 Score = 56.0 bits (28), Expect = 6e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 151 tcaccatgcgcaagaccgcggccaaggc 178 |||||||||||||||||||||||||||| Sbjct: 158 tcaccatgcgcaagaccgcggccaaggc 185
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 143 bits (72), Expect = 4e-31 Identities = 96/104 (92%) Strand = Plus / Plus Query: 185 ctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcga 244 |||| ||||||||||||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 144 ctccggcagcccgtggtacggccccgaccgcgtgctctacctgggcccactgtccggcga 203 Query: 245 gcccccgagctacctcagcggcgagttcccgggcgattacggct 288 ||||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 204 gcccccgagctacctgacgggcgagttcccgggcgactacggct 247
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 141 bits (71), Expect = 1e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 127 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 186 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||| | |||||||||||| ||||| ||||| Sbjct: 187 agctacctgaccggcgagttccccggcgactacgg 221
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 141 bits (71), Expect = 1e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 23603670 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 23603729 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||| | |||||||||||| ||||| ||||| Sbjct: 23603730 agctacctgaccggcgagttccccggcgactacgg 23603764 Score = 137 bits (69), Expect = 2e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 30024476 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 30024535 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| |||||||||||| ||||| ||||||| Sbjct: 30024536 tcctacctcaccggcgagttccccggcgactacggct 30024572 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 |||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 37443416 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccgg 37443369
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 141 bits (71), Expect = 1e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 66369 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 66428 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||| | |||||||||||| ||||| ||||| Sbjct: 66429 agctacctgaccggcgagttccccggcgactacgg 66463
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 141 bits (71), Expect = 1e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 198 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 257 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||| | |||||||||||| ||||| ||||| Sbjct: 258 agctacctgaccggcgagttccccggcgactacgg 292
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 141 bits (71), Expect = 1e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 197 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 256 Query: 252 agctacctcagcggcgagttcccgggcgattacgg 286 |||||||| | |||||||||||| ||||| ||||| Sbjct: 257 agctacctgaccggcgagttccccggcgactacgg 291
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 137 bits (69), Expect = 2e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 198 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| |||||||||||| ||||| ||||||| Sbjct: 199 tcctacctcaccggcgagttccccggcgactacggct 235
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 137 bits (69), Expect = 2e-29 Identities = 90/97 (92%) Strand = Plus / Minus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14535 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 14476 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| |||||||||||| ||||| ||||||| Sbjct: 14475 tcctacctcaccggcgagttccccggcgactacggct 14439
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 137 bits (69), Expect = 2e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 20466 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 20525 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| |||||||||||| ||||| ||||||| Sbjct: 20526 tcctacctcaccggcgagttccccggcgactacggct 20562
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 137 bits (69), Expect = 2e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 279 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| |||||||||||| ||||| ||||||| Sbjct: 280 tcctacctcaccggcgagttccccggcgactacggct 316
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 137 bits (69), Expect = 2e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 279 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| |||||||||||| ||||| ||||||| Sbjct: 280 tcctacctcaccggcgagttccccggcgactacggct 316
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 137 bits (69), Expect = 2e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 281 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| |||||||||||| ||||| ||||||| Sbjct: 282 tcctacctcaccggcgagttccccggcgactacggct 318
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 137 bits (69), Expect = 2e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 281 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| |||||||||||| ||||| ||||||| Sbjct: 282 tcctacctcaccggcgagttccccggcgactacggct 318
>gb|BC029947.1| Homo sapiens, clone IMAGE:5196281, mRNA Length = 114 Score = 129 bits (65), Expect = 5e-27 Identities = 101/112 (90%), Gaps = 7/112 (6%) Strand = Plus / Plus Query: 38 cagcagcttgctctgttccatccggcagcaagcaatggcggccacgacca---tggcgct 94 ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| Sbjct: 1 cagcagcttgctctgttccatccggcagcaa----tggcggccaccaccaccatggcgct 56 Query: 95 ctcctcccccgcgatgaagctcgccggagcctcgtacgtcctcggcggcggc 146 ||||||||||||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 57 ctcctcccccgcgatcaagctcgccggagcctcctacgccctcggcggcggc 108
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 129 bits (65), Expect = 5e-27 Identities = 89/97 (91%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 181 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggcgagccgccg 240 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| |||||||||| | ||||| ||||||| Sbjct: 241 tcctacctcaccggcgagttctccggcgactacggct 277
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 121 bits (61), Expect = 1e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||| ||| Sbjct: 1151 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggcgagccgccg 1210 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| | ||||||||||||||||| ||||||| Sbjct: 1211 agctacctgacgggcgagttcccgggcgactacggct 1247
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 121 bits (61), Expect = 1e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||| ||| Sbjct: 203 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggcgagccgccg 262 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| | ||||||||||||||||| ||||||| Sbjct: 263 agctacctgacgggcgagttcccgggcgactacggct 299
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 121 bits (61), Expect = 1e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||| ||| Sbjct: 1151 agcccgtggtacggccccgaccgcgtgctgtacctgggcccactgtccggcgagccgccg 1210 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| | ||||||||||||||||| ||||||| Sbjct: 1211 agctacctgacgggcgagttcccgggcgactacggct 1247
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 119 bits (60), Expect = 5e-24 Identities = 89/98 (90%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccg---gcgagccc 248 ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 624 agcccgtggtacggcgccgaccgcgtgctctacctcggcccgctctccggccgcgagccg 683 Query: 249 ccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||||||| | |||||||||||| ||||| ||||| Sbjct: 684 ccgagctacctgaccggcgagttccccggcgactacgg 721
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 119 bits (60), Expect = 5e-24 Identities = 128/151 (84%), Gaps = 6/151 (3%) Strand = Plus / Plus Query: 144 ggccgcatcaccatgcgcaagaccgcgg------ccaaggctgccacctccagcagcccg 197 ||||||||||||||||||||||||| || |||||| || | ||| ||||||| Sbjct: 967 ggccgcatcaccatgcgcaagaccgtgggcaagcccaaggtggcggcgtccggcagcccc 1026 Query: 198 tggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccgagctac 257 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 1027 tggtacggccccgaccgcgtcaagtacctcggccccttctccggcgagcccccgagctac 1086 Query: 258 ctcagcggcgagttcccgggcgattacggct 288 |||| |||||||||||| ||||| ||||||| Sbjct: 1087 ctcaccggcgagttccccggcgactacggct 1117
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 111 bits (56), Expect = 1e-21 Identities = 88/98 (89%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctc---cggcgagccc 248 ||||||||||||||| |||||||||| |||||||||||||||||||| | ||||||| Sbjct: 585 agcccgtggtacggcgccgaccgcgtcctctacctcggcccgctctcgggccgcgagccg 644 Query: 249 ccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||||||||| |||||||||||| ||||| ||||| Sbjct: 645 ccgagctacctcaccggcgagttccccggcgactacgg 682 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 534 atcaccatgcgcaagaccgc 553 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 459 accatggcgctctcctcccc 478
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 97.6 bits (49), Expect = 2e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 189 agcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagccc 248 |||||||||||||||||| | ||||| |||||||||||||||||||| |||||||||||| Sbjct: 339 agcagcccgtggtacggctctgaccgtgtgctctacctcggcccgctttccggcgagccc 398 Query: 249 ccgagctac 257 || |||||| Sbjct: 399 cccagctac 407
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 89.7 bits (45), Expect = 5e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcg 243 ||||| ||||||| |||||||| | ||||| ||||||||||||||||| |||||||| | Sbjct: 143 cctccggcagcccatggtacggtgctgaccgtgtgctctacctcggcccactctccggtg 202 Query: 244 agcccccgagctacctcagcggcgagttcccgggcga 280 |||| ||||||||||| | ||| |||||||| ||||| Sbjct: 203 agcctccgagctacctgaccggtgagttccctggcga 239 Score = 42.1 bits (21), Expect = 0.95 Identities = 30/33 (90%) Strand = Plus / Plus Query: 146 ccgcatcaccatgcgcaagaccgcggccaaggc 178 |||| ||||||||||||||||||| || ||||| Sbjct: 99 ccgcgtcaccatgcgcaagaccgcagcaaaggc 131
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 81.8 bits (41), Expect = 1e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 189 agcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagccc 248 |||||||||||||||||| | ||||| ||||||||||||||| |||| |||||||| ||| Sbjct: 134 agcagcccgtggtacggctctgaccgtgtgctctacctcggctcgctttccggcgaaccc 193 Query: 249 ccgagctac 257 || |||||| Sbjct: 194 cccagctac 202
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcg 243 ||||||||||||| |||||||| | || || ||||||||||||||||| ||||| ||| Sbjct: 152 cctccagcagcccatggtacggagctgatcgtgtgctctacctcggcccactctctcgcg 211 Query: 244 agcccccgagctacctcagcggcgagttccc 274 ||||||| |||||||||| ||| || ||||| Sbjct: 212 agcccccaagctacctcaccggtgatttccc 242
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 75.8 bits (38), Expect = 7e-11 Identities = 86/102 (84%) Strand = Plus / Plus Query: 185 ctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcga 244 |||| ||||||| |||||||| |||||||||| || ||||| |||||||| |||||| Sbjct: 2055 ctccggcagcccctggtacggtgccgaccgcgtcctgtacctgggcccgctgtccggctc 2114 Query: 245 gcccccgagctacctcagcggcgagttcccgggcgattacgg 286 || ||||||||||| | |||||||||||| ||||| ||||| Sbjct: 2115 acctccgagctacctgaccggcgagttccccggcgactacgg 2156 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 130 acgtcctcggcggcggccgcatcaccatgcgcaagaccgcggccaag 176 ||||| |||||| |||||||||||||||||||||||||| |||||| Sbjct: 1994 acgtcttcggcgagggccgcatcaccatgcgcaagaccgccgccaag 2040
>ref|XM_483142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 ||||||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 350 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 401
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 ||||||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 24462467 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 24462518
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 71.9 bits (36), Expect = 1e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 |||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 37953 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccgg 37906
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 71.9 bits (36), Expect = 1e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 ||||||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 78183 gcagcccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 78234
>ref|NM_190738.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 69.9 bits (35), Expect = 4e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccg 240 |||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 483 cccgtggtacggccccgaccgcgtcatctacctccgcccgctctccg 529
>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 mRNA, complete cds Length = 859 Score = 65.9 bits (33), Expect = 7e-08 Identities = 81/97 (83%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 ||||||||||||||||||| ||||| || |||||||||||| ||||||||||| ||| Sbjct: 194 gcagcccgtggtacggcccggaccgtgtcaagtacctcggcccgttctccggcgaggccc 253 Query: 250 cgagctacctcagcggcgagttcccgggcgattacgg 286 | ||||||| |||||| ||||| ||||| ||||| Sbjct: 254 catcatacctcaccggcgaattccccggcgactacgg 290 Score = 40.1 bits (20), Expect = 3.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 137 cggcggcggccgcatcaccatgcgcaagaccgcggccaag 176 ||||| ||| ||| |||| |||||||||||||| |||||| Sbjct: 135 cggcgacggacgcttcacgatgcgcaagaccgccgccaag 174
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 65.9 bits (33), Expect = 7e-08 Identities = 87/105 (82%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcg 243 ||||| ||||||| |||||||| ||||||||||| ||||| |||||| ||||||||| Sbjct: 528 cctccggcagcccctggtacgggcccgaccgcgtcaagtacctaggcccgttctccggcg 587 Query: 244 agcccccgagctacctcagcggcgagttcccgggcgattacggct 288 || | ||| |||||| | |||||||||| | ||||| ||||||| Sbjct: 588 aggcgccgtcctacctgaccggcgagttcgccggcgactacggct 632
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 ||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 62463 cccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 62510
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 63.9 bits (32), Expect = 3e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 ||||| |||||||||||||||||| |||||||| ||||||||||||| Sbjct: 17802509 cccgtcgtacggccccgaccgcgtcatctacctccgcccgctctccgg 17802556
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 198 tggtacggccccgaccgcgtgctctacctcggcccgctctc 238 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 94169 tggtacggccccgaccgcgtcatctacctccgcccgctctc 94129
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 198 tggtacggccccgaccgcgtgctctacctcggcccgctctc 238 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 18189184 tggtacggccccgaccgcgtcatctacctccgcccgctctc 18189144 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 3503805 gcagcccgtggtacggacccaaccgcgt 3503832
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 198 tggtacggccccgaccgcgtgctctacctcggcccgctctc 238 |||||||||||||||||||| |||||||| |||||||||| Sbjct: 18182725 tggtacggccccgaccgcgtcatctacctccgcccgctctc 18182685 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 3503916 gcagcccgtggtacggacccaaccgcgt 3503943
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcg 243 ||||| ||||||| ||||||||||||||| | || ||||||||||| ||||||||| Sbjct: 42 cctccggcagcccctggtacggccccgacagagtcaagtacctcggccccttctccggcg 101 Query: 244 agcccccgagctacctcagcggcgagttcccgggcgattacggct 288 || |||| ||||||| |||||||||| | ||||| ||||||| Sbjct: 102 aggccccctcatacctcaccggcgagttcgccggcgactacggct 146
>ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.3 mRNA, complete cds Length = 3299 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 3065 tctccggcgagcccccgagctaccttaccggtgagttccc 3026
>ref|NM_001036401.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.2 mRNA, complete cds Length = 3338 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 3104 tctccggcgagcccccgagctaccttaccggtgagttccc 3065
>ref|NM_128994.2| Arabidopsis thaliana LHB1B2; chlorophyll binding AT2G34420 (LHB1B2) transcript variant AT2G34420.1 mRNA, complete cds Length = 1354 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccc 273
>ref|NM_179900.1| Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) transcript variant AT2G34420.2 mRNA, complete cds Length = 1312 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccc 273
>gb|AY142513.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 829 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccc 218
>gb|AY045806.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 1015 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 234 tctccggcgagcccccgagctaccttaccggtgagttccc 273
>emb|AJ843976.1| Plantago major partial mRNA for light harvesting protein 1 (lhc1 gene) Length = 688 Score = 56.0 bits (28), Expect = 6e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 186 tccagcagcccgtggtacggccccgaccgcgt 217 ||||||||||||||||||||||| |||||||| Sbjct: 25 tccagcagcccgtggtacggccctgaccgcgt 56
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 93822 tctccggcgagcccccgagctaccttaccggtgagttccc 93783 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| Sbjct: 95486 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgg 95537
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 80380 tctccggcgagcccccgagctaccttaccggtgagttccc 80419 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| Sbjct: 78716 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgg 78665
>gb|AY081587.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 883 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccc 218
>gb|AY079110.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccc 218
>gb|AY079101.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 179 tctccggcgagcccccgagctaccttaccggtgagttccc 218
>gb|AY065125.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420; T31E10.24) mRNA, complete cds Length = 969 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccc 269
>gb|AF419587.1|AF419587 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccc 269
>gb|AF419548.1|AF419548 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccc 269
>gb|AF428397.1|AF428397 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 1024 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccc 269
>gb|AY039561.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 995 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccc 269
>gb|AF372886.1|AF372886 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 230 tctccggcgagcccccgagctaccttaccggtgagttccc 269
>emb|BX814757.1|CNS0AEAM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB92ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 409 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 239 tctccggcgagcccccgagctaccttaccggtgagttccc 200
>emb|BX821952.1|CNS0AABH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 949 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 209 tctccggcgagcccccgagctaccttaccggtgagttccc 248
>emb|BX821505.1|CNS0A93G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 959 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 221 tctccggcgagcccccgagctaccttaccggtgagttccc 260
>emb|BX820019.1|CNS0A9C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 903 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 211 tctccggcgagcccccgagctaccttaccggtgagttccc 250
>emb|BX820007.1|CNS0A9CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 885 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 214 tctccggcgagcccccgagctaccttaccggtgagttccc 253
>emb|BX821638.1|CNS0A92F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 911 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 214 tctccggcgagcccccgagctaccttaccggtgagttccc 253
>emb|BX822910.1|CNS0A63G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 705 tctccggcgagcccccgagctaccttaccggtgagttccc 666
>gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein (CipLhcb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 975 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||| |||||||| |||||||||||| Sbjct: 234 tctccggcgagcccccgtcctacctcaccggcgagttccc 273
>emb|X64460.1|ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II chlorophyll a/b binding protein Length = 1405 Score = 56.0 bits (28), Expect = 6e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||||||||||||||| | ||| |||||||| Sbjct: 479 tctccggcgagcccccgagctaccttaccggtgagttccc 518
>gb|AY389553.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein (CAB) mRNA, partial cds Length = 720 Score = 54.0 bits (27), Expect = 3e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 |||||||||||||||||||||| || || |||||||||||| ||||||| ||| | | Sbjct: 178 gcagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccggtgaggcac 237 Query: 250 cgagctacctcagcggcgagttcccgggcgattacggct 288 | ||||||| ||| |||||||| ||||| ||||||| Sbjct: 238 catcatacctcaccggtgagttccccggcgactacggct 276
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 54.0 bits (27), Expect = 3e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 |||||||||||||||||||||| || || |||||||||||| ||||||| ||| | | Sbjct: 13 gcagcccgtggtacggccccgaacgtgtcaagtacctcggcccgttctccggtgaggcac 72 Query: 250 cgagctacctcagcggcgagttcccgggcgattacggct 288 | ||||||| ||| |||||||| ||||| ||||||| Sbjct: 73 catcatacctcaccggtgagttccccggcgactacggct 111
>gb|DQ355993.1| Brassica napus chlorophyll a/b binding protein (LHB1B2) mRNA, partial cds Length = 226 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 237 tccggcgagcccccgagctacctcagcggcgagttccc 274 ||||| ||||||||||||||||||| ||| |||||||| Sbjct: 1 tccggagagcccccgagctacctcaccggagagttccc 38
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 50.1 bits (25), Expect = 0.004 Identities = 43/49 (87%) Strand = Plus / Plus Query: 240 ggcgagcccccgagctacctcagcggcgagttcccgggcgattacggct 288 |||||||||||||||||||| | ||||||||||| || || ||||||| Sbjct: 183 ggcgagcccccgagctacctgactggcgagttccccggtgactacggct 231
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||||||||||| Sbjct: 76481 ccacctctggcagcccgtggtacggacccgaccgcgt 76445
>emb|AJ000765.1|CRAJ765 Chlamydomonas reinhardtii mRNA for calreticulin Length = 2336 Score = 50.1 bits (25), Expect = 0.004 Identities = 43/49 (87%) Strand = Plus / Minus Query: 240 ggcgagcccccgagctacctcagcggcgagttcccgggcgattacggct 288 |||||||||||||||||||| | ||||||||||| || || ||||||| Sbjct: 239 ggcgagcccccgagctacctgactggcgagttccccggtgactacggct 191
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 50.1 bits (25), Expect = 0.004 Identities = 43/49 (87%) Strand = Plus / Plus Query: 240 ggcgagcccccgagctacctcagcggcgagttcccgggcgattacggct 288 |||||||||||||||||||| | ||||||||||| || || ||||||| Sbjct: 181 ggcgagcccccgagctacctgactggcgagttccccggtgactacggct 229
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||||||||||| Sbjct: 18136647 ccacctctggcagcccgtggtacggacccgaccgcgt 18136683
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||||||||||| Sbjct: 18145900 ccacctctggcagcccgtggtacggacccgaccgcgt 18145936
>gb|U39475.1|GMU39475 Glycine max chlorophyll a/b-binding protein (cab3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 977 Score = 50.1 bits (25), Expect = 0.004 Identities = 79/97 (81%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccccg 251 ||||| ||||||||||| |||||||| ||| | ||||| |||| |||||||||||| Sbjct: 164 agcccatggtacggcccagaccgcgtcaagtacttgggcccattctctggcgagcccccg 223 Query: 252 agctacctcagcggcgagttcccgggcgattacggct 288 |||||||| ||||||||||| || || ||||||| Sbjct: 224 tcctacctcactggcgagttcccaggtgactacggct 260
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 50.1 bits (25), Expect = 0.004 Identities = 43/49 (87%) Strand = Plus / Plus Query: 240 ggcgagcccccgagctacctcagcggcgagttcccgggcgattacggct 288 |||||||||||||||||||| | ||||||||||| || || ||||||| Sbjct: 167 ggcgagcccccgagctacctgactggcgagttccccggtgactacggct 215
>ref|NM_128995.2| Arabidopsis thaliana LHB1B1; chlorophyll binding AT2G34430 (LHB1B1) mRNA, complete cds Length = 1008 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgg 295
>gb|DQ226825.1| Boechera divaricarpa isolate SLW-B-H09 mRNA sequence Length = 775 Score = 48.1 bits (24), Expect = 0.015 Identities = 36/40 (90%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||| ||||||||||| | ||| |||||||| Sbjct: 13 tctccggcgagccaccgagctaccttaccggagagttccc 52
>gb|DQ226787.1| Boechera divaricarpa isolate SLW-B-B06 mRNA sequence Length = 827 Score = 48.1 bits (24), Expect = 0.015 Identities = 36/40 (90%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttccc 274 ||||||||||||| ||||||||||||| || |||||||| Sbjct: 13 tctccggcgagccaccgagctacctcacaggagagttccc 52
>gb|AF339687.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 851 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| Sbjct: 182 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgg 233
>gb|AF326864.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 1019 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgg 295
>gb|AY120776.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 1003 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgg 295
>gb|AF324693.2|AF324693 Arabidopsis thaliana At2g34430 (At2g34430/T31E10.23) mRNA, complete cds Length = 1009 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgg 295
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.015 Identities = 42/48 (87%) Strand = Plus / Minus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 |||||||||| | ||||||||||| |||||||| ||| ||||||||| Sbjct: 31814159 cccgtggtacagtcccgaccgcgtcatctacctccgcctgctctccgg 31814112
>gb|AY086307.1| Arabidopsis thaliana clone 23727 mRNA, complete sequence Length = 979 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| Sbjct: 244 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgg 295
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 48.1 bits (24), Expect = 0.015 Identities = 42/48 (87%) Strand = Plus / Minus Query: 194 cccgtggtacggccccgaccgcgtgctctacctcggcccgctctccgg 241 |||||||||| | ||||||||||| |||||||| ||| ||||||||| Sbjct: 109957 cccgtggtacagtcccgaccgcgtcatctacctccgcctgctctccgg 109910
>emb|X64459.1|ATLHB1B1 A.thaliana Lhb1B1 gene for photosystem II type I chlorophyll a/b binding protein Length = 1301 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| Sbjct: 482 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgg 533
>gb|BT002103.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 853 Score = 48.1 bits (24), Expect = 0.015 Identities = 45/52 (86%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 ||||||| ||||| ||||||||||||| || |||||||| || |||||||| Sbjct: 182 tctccggtgagcctccgagctacctcactggagagttccccggtgattacgg 233
>gb|AY389573.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 (LHCP) mRNA, partial cds Length = 712 Score = 46.1 bits (23), Expect = 0.061 Identities = 80/99 (80%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctcggcccgctctccggcgagcccc 249 ||||||| ||||||||||| ||||| || |||||||||||| ||||||| ||| | | Sbjct: 98 gcagcccctggtacggcccggaccgtgtcaagtacctcggcccgttctccggtgaggcac 157 Query: 250 cgagctacctcagcggcgagttcccgggcgattacggct 288 | ||||||| ||| |||||||| ||||| ||||||| Sbjct: 158 catcatacctcaccggtgagttccccggcgactacggct 196
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 46.1 bits (23), Expect = 0.061 Identities = 32/35 (91%) Strand = Plus / Plus Query: 240 ggcgagcccccgagctacctcagcggcgagttccc 274 |||||||||||||||||||| | ||||||||||| Sbjct: 490 ggcgagcccccgagctacctgactggcgagttccc 524
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 46.1 bits (23), Expect = 0.061 Identities = 32/35 (91%) Strand = Plus / Plus Query: 240 ggcgagcccccgagctacctcagcggcgagttccc 274 |||||||||||||||||||| | ||||||||||| Sbjct: 403 ggcgagcccccgagctacctgactggcgagttccc 437
>gb|BT023765.1| Drosophila melanogaster RE18252 full insert cDNA Length = 3550 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 445 cgcagcagcagccgcacatcag 466
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 cgccggagcctcgtacgtcctcggcg 141 |||||||||| ||||||||||||||| Sbjct: 3741869 cgccggagccgcgtacgtcctcggcg 3741894
>ref|NM_165165.1| Drosophila melanogaster CG5953-RB, transcript variant B (CG5953), mRNA Length = 3796 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 707 cgcagcagcagccgcacatcag 728
>ref|NM_135952.1| Drosophila melanogaster CG5953-RA, transcript variant A (CG5953), mRNA Length = 3534 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 445 cgcagcagcagccgcacatcag 466
>gb|AC007185.12|AC007185 Drosophila melanogaster, chromosome 2L, region 36A-, BAC clone BACR44N04, complete sequence Length = 190651 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 70485 cgcagcagcagccgcacatcag 70464
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 140 cggcggccgcatcaccatgcgc 161 |||||||||||||||||||||| Sbjct: 123 cggcggccgcatcaccatgcgc 144
>emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein Length = 1361 Score = 44.1 bits (22), Expect = 0.24 Identities = 46/54 (85%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggct 288 |||| |||||||||||| |||||| | ||| |||||||| ||||| ||||||| Sbjct: 426 tctctggcgagcccccgtcctacctaaccggtgagttcccaggcgactacggct 479
>gb|AE003651.2| Drosophila melanogaster chromosome 2L, section 60 of 83 of the complete sequence Length = 254646 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 166862 cgcagcagcagccgcacatcag 166841
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 cgccggagcctcgtacgtcctcggcg 141 |||||||||| ||||||||||||||| Sbjct: 3726293 cgccggagccgcgtacgtcctcggcg 3726318
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 ccccgaccgcgtgctctacctcggc 230 ||||||||||||| ||||||||||| Sbjct: 436200 ccccgaccgcgtgatctacctcggc 436176
>emb|X16436.1|SACAB Mustard cab gene for chlorophyll a/b-binding protein Length = 2774 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacct 259 |||||||||||||||| |||||||| Sbjct: 1757 tctccggcgagcccccaagctacct 1781
>gb|AY288914.1| Brassica oleracea chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1042 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacct 259 ||||||||||||| ||||||||||| Sbjct: 257 tctccggcgagccaccgagctacct 281
>gb|AE011818.1| Xanthomonas axonopodis pv. citri str. 306, section 196 of 469 of the complete genome Length = 11244 Score = 42.1 bits (21), Expect = 0.95 Identities = 27/29 (93%) Strand = Plus / Minus Query: 136 tcggcggcggccgcatcaccatgcgcaag 164 |||||||||||||||||||| ||||||| Sbjct: 3700 tcggcggcggccgcatcaccgcgcgcaag 3672
>gb|AC006435.7|AC006435 Homo sapiens chromosome 17, clone RP5-59D14, complete sequence Length = 139267 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ctctcctcccccgcgatgaagctcg 117 ||||||||||||| ||||||||||| Sbjct: 38496 ctctcctcccccgggatgaagctcg 38472
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||| ||||||| Sbjct: 16289621 ccacctctggcagcccgtggtacggacccaaccgcgt 16289585
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026F02 Length = 132237 Score = 42.1 bits (21), Expect = 0.95 Identities = 33/37 (89%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||| ||||||| Sbjct: 114513 ccacctctggcagcccgtggtacggacccaaccgcgt 114477
>emb|X15894.1|SACAB1 Sinapsis alba cab-1 gene for chlorophyll a/b-binding polypeptide Length = 2775 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacct 259 |||||||||||||||| |||||||| Sbjct: 1758 tctccggcgagcccccaagctacct 1782
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 cctcggcggcggccgcatcac 154 ||||||||||||||||||||| Sbjct: 4204589 cctcggcggcggccgcatcac 4204609
>gb|AF133340.1|AF133340 Phalaenopsis sp. 'KCbutterfly' putative chlorophyll a/b-binding protein mRNA, complete cds Length = 1118 Score = 42.1 bits (21), Expect = 0.95 Identities = 51/61 (83%) Strand = Plus / Plus Query: 228 ggcccgctctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacggc 287 |||||| |||| |||||||| || |||||||| ||||||||||| || ||||||||| Sbjct: 264 ggcccgttctctggcgagccaccttcctacctcactggcgagttccccggtgattacggc 323 Query: 288 t 288 | Sbjct: 324 t 324
>ref|NM_187740.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2655 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 419 gcagcccgtggtacggacccaaccgcgt 392
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 233 tacctgaggggcgagttcccgggcgactacgg 264
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 257 tacctgaggggcgagttcccgggcgactacgg 288
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 257 tacctgaggggcgagttcccgggcgactacgg 288
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 259 tacctgaggggcgagttcccgggcgactacgg 290
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgg 293
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgg 293
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 264 tacctgaggggcgagttcccgggcgactacgg 295
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 297 tacctgaggggcgagttcccgggcgactacgg 328
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cagtcgcagcagcagccgca 34 |||||||||||||||||||| Sbjct: 68856 cagtcgcagcagcagccgca 68837
>ref|XM_976294.1| PREDICTED: Mus musculus similar to zinc finger and BTB domain containing 10 (LOC669642), mRNA Length = 7573 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 1013 acgtcctcggcggcggccgc 994
>ref|XM_485202.4| PREDICTED: Mus musculus zinc finger and BTB domain containing 10, transcript variant 1 (Zbtb10), mRNA Length = 7702 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 1070 acgtcctcggcggcggccgc 1051
>ref|XM_979038.1| PREDICTED: Mus musculus zinc finger and BTB domain containing 10 (Zbtb10), mRNA Length = 6568 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 29 acgtcctcggcggcggccgc 10
>ref|XM_799661.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505229.20) partial mRNA Length = 1686 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 acgaccatggcgctctcctc 100 |||||||||||||||||||| Sbjct: 473 acgaccatggcgctctcctc 454
>ref|XM_805848.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510823.20) partial mRNA Length = 1659 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 acgaccatggcgctctcctc 100 |||||||||||||||||||| Sbjct: 467 acgaccatggcgctctcctc 448
>ref|XM_845200.1| PREDICTED: Canis familiaris similar to calmodulin-binding transcription activator 1 (LOC608237), mRNA Length = 7849 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgtcctcggcggcggccgca 150 |||||||||||||||||||| Sbjct: 1214 cgtcctcggcggcggccgca 1233
>gb|AC005482.2| Homo sapiens PAC clone RP4-736H5 from 7, complete sequence Length = 148656 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gctgccacctccagcagccc 196 |||||||||||||||||||| Sbjct: 72320 gctgccacctccagcagccc 72339
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 accgcggccaaggctgccac 184 |||||||||||||||||||| Sbjct: 863107 accgcggccaaggctgccac 863088
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cccgcgatgaagctcgccgg 121 |||||||||||||||||||| Sbjct: 650678 cccgcgatgaagctcgccgg 650659
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tacgtcctcggcggcggccg 148 |||||||||||||||||||| Sbjct: 3807238 tacgtcctcggcggcggccg 3807257
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 1001 acgtcctcggcggcggccgc 1020
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtgg 200 |||||||||||||||||||| Sbjct: 270973 ccacctccagcagcccgtgg 270954
>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete sequence Length = 31310 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gccacctccagcagcccgtg 199 |||||||||||||||||||| Sbjct: 28821 gccacctccagcagcccgtg 28802
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cagtcgcagcagcagccgca 34 |||||||||||||||||||| Sbjct: 30160 cagtcgcagcagcagccgca 30141
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 6570 gcagcccgtggtacggacccaaccgcgt 6543
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 accgcggccaaggctgccac 184 |||||||||||||||||||| Sbjct: 248359 accgcggccaaggctgccac 248378
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 22434270 tacctgaggggcgagttcccgggcgactacgg 22434301
>gb|AY198376.1| Citrus limon chlorophyll a/b-binding protein precursor, gene, partial cds; nuclear gene for chloroplast product Length = 647 Score = 40.1 bits (20), Expect = 3.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 235 tctccggcgagcccccgagctacctcagcggcgagttcccgggcgattacgg 286 |||| ||||||||||| |||||| | | ||| |||||||| ||||| ||||| Sbjct: 179 tctctggcgagcccccaagctacttgaccggtgagttccctggcgactacgg 230
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 21458 gcagcccgtggtacggacccaaccgcgt 21485
>gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosome ul, complete sequence Length = 186366 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gccaaggctgccacctccag 190 |||||||||||||||||||| Sbjct: 153730 gccaaggctgccacctccag 153711
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 95337 tacctgaggggcgagttcccgggcgactacgg 95368
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgg 293
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgg 293
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgg 293
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtggtacggccccgaccgcg 216 |||||||||||||||||||| Sbjct: 146 gtggtacggccccgaccgcg 165
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 233 tacctgaggggcgagttcccgggcgactacgg 264
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgg 293
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 257 tacctgaggggcgagttcccgggcgactacgg 288
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 257 tacctgaggggcgagttcccgggcgactacgg 288
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 262 tacctgaggggcgagttcccgggcgactacgg 293
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 258 tacctgaggggcgagttcccgggcgactacgg 289
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 264 tacctgaggggcgagttcccgggcgactacgg 295
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cagtcgcagcagcagccgca 34 |||||||||||||||||||| Sbjct: 212586 cagtcgcagcagcagccgca 212605
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 248962 acgtcctcggcggcggccgc 248943
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 252446 acgtcctcggcggcggccgc 252427
>gb|AC126450.4| Mus musculus BAC clone RP23-379J7 from 3, complete sequence Length = 159914 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 64191 acgtcctcggcggcggccgc 64210
>gb|AF022738.1|AF022738 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1105 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 255 tacctcagcggcgagttcccgggcgattacgg 286 ||||| || ||||||||||||||||| ||||| Sbjct: 238 tacctgaggggcgagttcccgggcgactacgg 269 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,276,365 Number of Sequences: 3902068 Number of extensions: 2276365 Number of successful extensions: 48497 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 172 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 47291 Number of HSP's gapped (non-prelim): 1194 length of query: 288 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 266 effective length of database: 17,147,199,772 effective search space: 4561155139352 effective search space used: 4561155139352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
