>CCS_HUMAN (O14618) Copper chaperone for superoxide dismutase (Superoxide|
           dismutase copper chaperone)
          Length = 274

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 23/70 (32%), Positives = 38/70 (54%)
 Frame = +2

Query: 35  ASGQPAVQTLVLRVSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVK 214
           +  Q  + TL   V + C  C   +RK L+ + GVQDVEV  +   V+V  T+ ++ +  
Sbjct: 5   SGNQGTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQA 64

Query: 215 RLCKSGKQAL 244
            L  +G+QA+
Sbjct: 65  LLEGTGRQAV 74

>FIXI_BRAJA (Q59207) Nitrogen fixation protein fixI (E1-E2 type cation ATPase|
           fixI) (EC 3.6.3.-)
          Length = 730

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
 Frame = +2

Query: 8   VRREHSHPMASGQPAVQTLVLRVS-IHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMV- 181
           V R+ SH + +    ++ + L V  +HC GC  KI + L +I  V    V+    +V + 
Sbjct: 3   VTRDFSHYVRTAGEGIKHIDLAVEGVHCAGCMAKIERGLSAIPDVTLARVNLTDRRVALE 62

Query: 182 --TGTVDAETLVKRLCKSGKQALPWQHEPAAPAKNPEA 289
              GT+D    + RL + G +A P++ E A  A+  E+
Sbjct: 63  WKAGTLDPGRFIDRLEELGYKAYPFETESAEVAEVAES 100

>CCS_MOUSE (Q9WU84) Copper chaperone for superoxide dismutase (Superoxide|
           dismutase copper chaperone)
          Length = 274

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +2

Query: 53  VQTLVLRVSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVKRLCKSG 232
           V  L   V + C  C   + K LK + GVQ+V+V  +   V+V  T+ ++ +   L  +G
Sbjct: 11  VCALEFAVQMSCQSCVDAVHKTLKGVAGVQNVDVQLENQMVLVQTTLPSQEVQALLESTG 70

Query: 233 KQAL 244
           +QA+
Sbjct: 71  RQAV 74

>ATCU_YERPE (Q8ZCA7) Copper-transporting P-type ATPase (EC 3.6.3.4)|
          Length = 961

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 22/70 (31%), Positives = 37/70 (52%)
 Frame = +2

Query: 23  SHPMASGQPAVQTLVLRVSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAE 202
           + P AS   +VQ L+  +S  C  C  K++  L+ + GVQ   V+  +   +VTGT + E
Sbjct: 218 AQPAASEGESVQLLLTGMS--CASCVSKVQNALQRVDGVQVARVNLAERSALVTGTQNNE 275

Query: 203 TLVKRLCKSG 232
            L+  +  +G
Sbjct: 276 ALIAAVKNAG 285

>CCS_RAT (Q9JK72) Copper chaperone for superoxide dismutase (Superoxide|
           dismutase copper chaperone)
          Length = 274

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = +2

Query: 62  LVLRVSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVKRLCKSGKQA 241
           L   V + C  C   + K LK   GVQ+VEV  +   V+V  T+ ++ +   L  +G+QA
Sbjct: 14  LEFTVQMSCQSCVDAVHKTLKGAAGVQNVEVQLENQMVLVQTTLPSQEVQALLESTGRQA 73

Query: 242 L 244
           +
Sbjct: 74  V 74

>CCS_PIG (Q6PWT7) Copper chaperone for superoxide dismutase (Superoxide|
           dismutase copper chaperone)
          Length = 274

 Score = 37.7 bits (86), Expect = 0.012
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
 Frame = +2

Query: 62  LVLRVSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVKRLCKSGKQA 241
           L   V + C  C   + + L+ + G+Q VEV  +   V+V  T+ ++ +   L  +G+QA
Sbjct: 14  LEFAVQMTCQSCVDAVSRSLQGVAGIQSVEVQLENQMVLVQTTLPSQVVQALLEDTGRQA 73

Query: 242 L-------PWQHEPAAPA 274
           +        WQ+  AA A
Sbjct: 74  VLKGMGSGRWQNLEAAVA 91

>ATOX1_SHEEP (Q9XT28) Copper transport protein ATOX1 (Metal transport protein|
           ATX1) (Copper chaperone SAH)
          Length = 68

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +2

Query: 74  VSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVKRLCKSGK 235
           V + C GC   + +VL  + GVQ  ++D    KV +      +TL++ L K+GK
Sbjct: 8   VDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGK 60

>EF1B_AERPE (Q9Y904) Elongation factor 1-beta (EF-1-beta) (aEF-1beta)|
          Length = 90

 Score = 35.0 bits (79), Expect = 0.077
 Identities = 18/52 (34%), Positives = 35/52 (67%)
 Frame = +2

Query: 2   FQVRREHSHPMASGQPAVQTLVLRVSIHCHGCKKKIRKVLKSIQGVQDVEVD 157
           ++V  E   P+A G  A++ LV+ ++    G  +++ ++LK+I+GVQ+VEV+
Sbjct: 34  YEVLAEGEEPIAFGLKALK-LVIAMNEDTEGGTEEVEQLLKNIEGVQEVEVE 84

>ATOX1_MOUSE (O08997) Copper transport protein ATOX1 (Metal transport protein|
           ATX1)
          Length = 68

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +2

Query: 74  VSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVKRLCKSGK 235
           V + C GC + + +VL  + GV +  +D    KV +     ++TL+  L K+GK
Sbjct: 8   VDMTCEGCAEAVSRVLNKLGGV-EFNIDLPNKKVCIDSEHSSDTLLATLNKTGK 60

>MERA_THIFE (P17239) Mercuric reductase (EC 1.16.1.1) (Hg(II) reductase)|
          Length = 547

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +2

Query: 86  CHGCKKKIRKVLKSIQGVQDVEVDAQQ--HKVMVTGTVDAETLVKRLCKSG 232
           C GC   +RK L+ + GV++ +V       +V++ G V  + L+K +  SG
Sbjct: 16  CDGCAAHVRKALEGVPGVREAQVSYPDATARVVLEGEVPMQRLIKAVVASG 66

>ATP7B_MOUSE (Q64446) Copper-transporting ATPase 2 (EC 3.6.3.4) (Copper pump 2)|
           (Wilson disease-associated protein homolog)
          Length = 1462

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +2

Query: 38  SGQPAVQTLVLRVSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHK 172
           S  PA   +V  + + CH C K I   + S++G+ +++V  +Q K
Sbjct: 63  SSSPAATDVVNILGMTCHSCVKSIEDRISSLKGIVNIKVSLEQGK 107

>ATOX1_CANFA (Q9TT99) Copper transport protein ATOX1 (Metal transport protein|
           ATX1)
          Length = 68

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 74  VSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVKRLCKSGK 235
           V + C GC   + +VL  + GV + ++D    KV +      + L++ L K+GK
Sbjct: 8   VDMTCEGCSNAVSRVLNKLGGV-EFDIDLPNKKVCINSEHSVDILLETLEKTGK 60

>ATOX1_RAT (Q9WUC4) Copper transport protein ATOX1 (Metal transport protein|
           ATX1)
          Length = 68

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +2

Query: 74  VSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVKRLCKSGK 235
           V + C GC + + +VL  + GV +  +D    KV +     ++ L+  L K+GK
Sbjct: 8   VDMTCGGCAEAVSRVLNKLGGV-EFNIDLPNKKVCIESEHSSDILLATLNKTGK 60

>R1B11_SOLDE (Q6L3Y2) Putative late blight resistance protein homolog R1B-11|
          Length = 1252

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 17/50 (34%), Positives = 31/50 (62%)
 Frame = +2

Query: 53   VQTLVLRVSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAE 202
            ++ LVL+     HG  ++IRK L S+ G++ + ++  + K+ V G VDA+
Sbjct: 1190 IKKLVLKFD-RFHG-DEEIRKRLSSLPGIKSISINRGEKKLTVGGDVDAD 1237

>Y292_HAEIN (O32622) Hypothetical protein HI0292|
          Length = 68

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
 Frame = +2

Query: 53  VQTLVLRVS-IHCHGCKKKIRKVLKSIQGVQ--DVEVDAQQHKVMVTGTVDAETLVKRLC 223
           ++T+ L +  IHC  C K + +VL  + GVQ  DV+++ + +       V+   L++ + 
Sbjct: 1   MKTITLNIKGIHCGCCVKSLTQVLTELDGVQSADVQLEGKANITFDENRVNVAQLIEVIE 60

Query: 224 KSGKQA 241
            +G  A
Sbjct: 61  DAGFDA 66

>Y291_HAEIN (P43979) Protein HI0291|
          Length = 68

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
 Frame = +2

Query: 53  VQTLVLRVS-IHCHGCKKKIRKVLKSIQGVQ--DVEVDAQQHKVMVTGTVDAETLVKRLC 223
           ++T+ L +  IHC  C K + +VL  + GVQ  DV+++ + +       V+   L++ + 
Sbjct: 1   MKTITLNIKGIHCGCCVKNLTQVLTELDGVQSADVQLEGKANITFDENRVNVAQLIEVIE 60

Query: 224 KSGKQA 241
            +G  A
Sbjct: 61  DAGFDA 66

>CADA2_LISMO (Q60048) Probable cadmium-transporting ATPase (EC 3.6.3.3) (Cadmium|
           efflux ATPase)
          Length = 711

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 18/72 (25%), Positives = 30/72 (41%)
 Frame = +2

Query: 80  IHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVKRLCKSGKQALPWQHE 259
           + C  C  K  + +K I+GV +  V+    K+ VTG    + +        +QA  ++H 
Sbjct: 12  LSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEASIQQV--------EQAGAFEHL 63

Query: 260 PAAPAKNPEASP 295
              P K     P
Sbjct: 64  KIIPEKESFTDP 75

>URE1_CAMLA (Q5FB23) Urease beta subunit (EC 3.5.1.5) (Urea amidohydrolase beta|
           subunit)
          Length = 565

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = +2

Query: 71  RVSIHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVKRLCKSGK 235
           R  +    C+   +K LK    VQD+EV+ Q ++V + G + +   V  L  + K
Sbjct: 507 RKCVAVKNCRNITKKDLKFNDKVQDIEVNPQTYEVKINGELISSKSVDSLALARK 561

>KCNH4_HUMAN (Q9UQ05) Potassium voltage-gated channel subfamily H member 4|
            (Voltage-gated potassium channel subunit Kv12.3)
            (Ether-a-go-go-like potassium channel 1) (ELK channel 1)
            (ELK1) (Brain-specific eag-like channel 2) (BEC2)
          Length = 1017

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +2

Query: 158  AQQHKVMVTGTVDAETLVKRLCKSGKQALPWQHEPAAPAKNPEASPP 298
            A+ H     GT++  T +  L  S     P + +P  P+  PEASPP
Sbjct: 954  AEVHCPASVGTMETGTALLDLRPSILPPYPSEPDPLGPSPVPEASPP 1000

>R1B12_SOLDE (Q6L3Z4) Putative late blight resistance protein homolog R1B-12|
          Length = 1296

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = +2

Query: 98   KKKIRKV---LKSIQGVQDVEVDAQQHKVMVTGTVDAE 202
            +K+I K    L S+ G+Q + VD+ + K +V G +DA+
Sbjct: 1244 EKEISKAFDRLLSLPGIQSIAVDSNEKKFIVIGDMDAD 1281

>YHGF_ECOLI (P46837) Protein yhgF|
          Length = 773

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +2

Query: 137 VQDVEVDAQQHKVMVTGTVDAETLVKRLCKSGKQALPWQHEPAAPAKNPEASP 295
           V+ +EVD Q+ ++ +T  +D +       + G    P  + PAA  +  EA P
Sbjct: 703 VKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQP 755

>ATP7B_RAT (Q64535) Copper-transporting ATPase 2 (EC 3.6.3.4) (Copper pump 2)|
           (Wilson disease-associated protein homolog) (Pinal
           night-specific ATPase)
          Length = 1451

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = +2

Query: 44  QPAVQTLVLRVS-IHCHGCKKKIRKVLKSIQGVQDVEVDAQQHKVMVTGTVDAETLVKRL 220
           Q  + TL LR+  +HC  C   I   +  + GVQ++ V  +     V    D+  +    
Sbjct: 252 QNHLATLPLRIDGMHCKSCVLNIEGNIGQLPGVQNIHVSLENKTAQV--QYDSSCITPLF 309

Query: 221 CKSGKQALP 247
            ++  +ALP
Sbjct: 310 LQTAIEALP 318

>R1A10_SOLDE (Q60CZ8) Putative late blight resistance protein homolog R1A-10|
          Length = 1306

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = +2

Query: 134  GVQDVEVDAQQHKVMVTGTVDA---ETLVKRLCKSGKQAL 244
            G++ V  D ++ K+ VTG VDA   + +V++L K G   L
Sbjct: 1267 GIESVSSDEKEKKLTVTGDVDADEVQLVVEKLRKCGMPGL 1306

>CEMA_PHYPA (Q6YXR1) Chloroplast envelope membrane protein|
          Length = 439

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -2

Query: 135 PWMLLSTLRIFFLQPW--QWMETLRTKV 58
           PW   S L+I+FL+PW   W  T + ++
Sbjct: 228 PWGFSSLLKIWFLEPWLKNWWNTYQYQI 255


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,517,886
Number of Sequences: 219361
Number of extensions: 572766
Number of successful extensions: 2426
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2425
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)