Clone Name	baet98d02
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_474131.1| Oryza sativa (japonica cultivar-group), predic...	289	4e-75
2	dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA clon...	289	4e-75
3	dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA clon...	289	4e-75
4	gb|AF019147.1|AF019147 Zea mays cysteine proteinase Mir3 (mir3) ...	278	2e-71
5	gb|AY103676.1| Zea mays PCO102242 mRNA sequence	274	2e-70
6	dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) mRNA ...	274	2e-70
7	dbj|AB020961.1| Zea mays mRNA for cysteine protease component of...	262	9e-67
8	dbj|AK061729.1| Oryza sativa (japonica cultivar-group) cDNA clon...	190	3e-45
9	gb|AF134152.1|AF134152 Hordeum vulgare cysteine protease mRNA, p...	159	1e-35
10	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	149	1e-32
11	dbj|AK121500.1| Oryza sativa (japonica cultivar-group) cDNA clon...	149	1e-32
12	emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clon...	149	1e-32
13	emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4,...	149	1e-32
14	gb|AF454957.1| Brassica oleracea senescence-associated cysteine ...	105	1e-19
15	gb|AY526905.1| Pelargonium x hortorum cysteine protease-like pro...	103	5e-19
16	emb|Z99954.1|PVZ99954 Phaseolus vulgaris Moldavian encoding cyst...	98	3e-17
17	gb|AY973616.1| Manihot esculenta cysteine protease CP1 mRNA, com...	92	2e-15
18	dbj|AB109186.1| Helianthus annuus scp1 mRNA for cysteine proteas...	90	8e-15
19	gb|AY251055.1| Anthurium andraeanum senescence-associated cystei...	86	1e-13
20	gb|AF259983.1|AF259983 Ipomoea batatas putative cysteine proteas...	84	5e-13
21	dbj|AB098629.1| Daucus carota DcCysP6 mRNA for cysteine protease...	78	3e-11
22	ref|NM_103612.2| Arabidopsis thaliana cysteine-type endopeptidas...	74	5e-10
23	gb|AY133781.1| Arabidopsis thaliana clone U11707 putative cystei...	74	5e-10
24	gb|AY072130.1| Arabidopsis thaliana putative cysteine proteinase...	74	5e-10
25	dbj|AB252653.1| Platycodon grandiflorus PgCP1 mRNA for cysteine ...	74	5e-10
26	gb|AY081730.1| Arabidopsis thaliana F2G19.31/F2G19.31 mRNA, comp...	74	5e-10
27	dbj|AK221689.1| Arabidopsis thaliana mRNA for cysteine proteinas...	74	5e-10
28	gb|AY039606.1| Arabidopsis thaliana F2G19.31/F2G19.31 mRNA, comp...	74	5e-10
29	emb|BX813570.1|CNS0AELE Arabidopsis thaliana Full-length cDNA Co...	74	5e-10
30	gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G...	74	5e-10
31	dbj|D13043.1|ATHRD21A Arabidopsis thaliana rd21A gene for thiol ...	74	5e-10
32	dbj|AB098624.1| Daucus carota DcCysP1 mRNA for cysteine protease...	74	5e-10
33	emb|X66061.1|PSTHIOL P.sativum mRNA for thiolprotease	72	2e-09
34	gb|DQ123922.1| Coffea arabica x Coffea canephora clone HT-SSH1-B...	70	7e-09
35	gb|U17135.1|DCU17135 Dianthus caryophyllus cysteine proteinase (...	70	7e-09
36	gb|BT014302.1| Lycopersicon esculentum clone 133553F, mRNA sequence	68	3e-08
37	gb|AC148098.3| Medicago truncatula clone mth2-15b16, complete se...	68	3e-08
38	gb|AC150207.2| Medicago truncatula chromosome 2 BAC clone mte1-2...	68	3e-08
39	dbj|AB098631.1| Daucus carota DcCysP8 mRNA for cysteine protease...	68	3e-08
40	ref|NM_123672.2| Arabidopsis thaliana cysteine-type endopeptidas...	66	1e-07
41	gb|AY114661.1| Arabidopsis thaliana cysteine protease component ...	66	1e-07
42	gb|AY062608.1| Arabidopsis thaliana cysteine protease component ...	66	1e-07
43	gb|AF454958.1| Brassica oleracea senescence-associated cysteine ...	66	1e-07
44	dbj|AB008267.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	66	1e-07
45	gb|AF454956.1| Brassica oleracea senescence-associated cysteine ...	64	4e-07
46	gb|AF133839.1| Sandersonia aurantiaca papain-like cysteine prote...	60	7e-06
47	ref|NM_124405.2| Arabidopsis thaliana cysteine-type endopeptidas...	58	3e-05
48	gb|AY491402.1| Capsicum annuum cysteine protease mRNA, partial s...	58	3e-05
49	gb|AY091087.1| Arabidopsis thaliana putative cysteine proteinase...	58	3e-05
50	emb|AJ606073.1| Gossypium hirsutum mRNA for cysteine proteinase ...	58	3e-05
51	dbj|AB024031.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	58	3e-05
52	gb|AY106278.1| Zea mays PCO137999 mRNA sequence	58	3e-05
53	gb|U41902.1|PMU41902 Pseudosuga menziesii cysteine protease pseu...	58	3e-05
54	emb|AJ003137.1|LEAJ3137 Lycopersicon esculentum mRNA for cystein...	56	1e-04
55	gb|AF172856.1|AF172856 Lycopersicon esculentum cysteine protease...	56	1e-04
56	dbj|AP006667.1| Lotus japonicus genomic DNA, chromosome 5, clone...	56	1e-04
57	gb|M21444.1|TOMLTITP Lycopersicon esculentum low-temperature-ind...	56	1e-04
58	ref|NM_202612.1| Arabidopsis thaliana cysteine-type endopeptidas...	54	4e-04
59	ref|NM_112827.2| Arabidopsis thaliana cysteine-type endopeptidas...	54	4e-04
60	emb|AJ278817.1|HVU278817 Hordeum vulgare partial mRNA for putati...	54	4e-04
61	dbj|AB177386.1| Dianthus caryophyllus DC-CP2 mRNA for cysteine p...	54	4e-04
62	dbj|AB025624.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	54	4e-04
63	dbj|AK118509.1| Arabidopsis thaliana At3g19400 mRNA for putative...	54	4e-04
64	emb|CR732287.2|CNS0GRZ8 Tetraodon nigroviridis full-length cDNA	52	0.002
65	gb|AY333289.1| Branchiostoma lanceolatum isolate Brla-alpha63 ca...	52	0.002
66	emb|CR681473.2|CNS0FORX Tetraodon nigroviridis full-length cDNA	52	0.002
67	emb|CR667351.2|CNS0FDWD Tetraodon nigroviridis full-length cDNA	52	0.002
68	emb|CR666538.2|CNS0FD9S Tetraodon nigroviridis full-length cDNA	52	0.002
69	emb|CR662168.2|CNS0F9WE Tetraodon nigroviridis full-length cDNA	52	0.002
70	emb|CR659517.2|CNS0F7UR Tetraodon nigroviridis full-length cDNA	52	0.002
71	ref|XM_965320.1| PREDICTED: Tribolium castaneum similar to Cathe...	52	0.002
72	ref|XM_965804.1| PREDICTED: Tribolium castaneum similar to Cathe...	52	0.002
73	ref|XM_965745.1| PREDICTED: Tribolium castaneum similar to Cathe...	52	0.002
74	emb|X75749.1|VSCYSPRO V.sativa L. mRNA for cysteine protease	52	0.002
75	emb|X74406.1|HSPSEN102 Hemerocallis sp. mRNA for thiol-protease	52	0.002
76	gb|DQ455294.1| Medicago truncatula cDNA-AFLP fragment BT11M44_22...	52	0.002
77	gb|AY034030.1| Alstroemeria hybrid cultivar 'Samora' putative cy...	52	0.002
78	gb|AY881010.1| Nicotiana tabacum cysteine protease (CP2) mRNA, c...	52	0.002
79	ref|XM_474291.1| Oryza sativa (japonica cultivar-group), predic...	50	0.007
80	emb|AJ786770.1| Lubomirskia baicalensis partial mRNA for catheps...	50	0.007
81	emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4,...	50	0.007
82	gb|AY069923.1| Ascaris suum cathepsin L (cpl-1) mRNA, partial cds	50	0.007
83	dbj|AB098627.1| Daucus carota DcCysP4 mRNA for cysteine protease...	50	0.007
84	dbj|AK109371.2| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.007
85	dbj|AK099358.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.007
86	dbj|AK073373.1| Oryza sativa (japonica cultivar-group) cDNA clon...	50	0.007
87	gb|AF134153.1|AF134153 Hordeum vulgare cysteine protease mRNA, p...	50	0.007
88	gb|AF182079.1|AF182079 Matricaria chamomilla thiol protease (ctp...	50	0.007
89	emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clon...	50	0.007
90	dbj|D90407.1|RICOZB Oryza sativa (japonica cultivar-group) mRNA ...	50	0.007
91	gb|AF050756.1|AF050756 Ricinus communis cysteine endopeptidase p...	50	0.007
92	emb|AJ877019.1| Lubomirskia baicalensis catl-g gene for cathepsi...	50	0.007
93	emb|AJ872184.1| Lubomirskia baicalensis mRNA for cathepsin L (ca...	50	0.007
94	ref|NM_112826.2| Arabidopsis thaliana cysteine-type endopeptidas...	48	0.027
95	gb|AY504967.1| Iris hollandica putative cysteine protease 2 (CYS...	48	0.027
96	emb|CR726964.2|CNS0GNVE Tetraodon nigroviridis full-length cDNA	48	0.027
97	gb|AC131026.11| Medicago truncatula clone mth2-6e18, complete se...	48	0.027
98	gb|DQ459304.1| Aedes aegypti cathepsin L (CAT-L2) mRNA, complete...	48	0.027
99	emb|Z34895.1|VSCYSPROA V.sativa L. (PROT A) mRNA for cysteine pr...	48	0.027
100	gb|AY093350.1| Arabidopsis thaliana cysteine proteinase (At3g194...	48	0.027
101	gb|AY062725.1| Arabidopsis thaliana cysteine proteinase (At3g194...	48	0.027
102	emb|BX823701.1|CNS0A4SS Arabidopsis thaliana Full-length cDNA Co...	48	0.027
103	dbj|AK110539.1| Oryza sativa (japonica cultivar-group) cDNA clon...	48	0.027
104	emb|X91643.1|EDCP4 E.dispar RNA encoding for cysteine proteinase...	46	0.11
105	dbj|AB109189.1| Helianthus annuus scp4 mRNA for cysteine proteas...	46	0.11
106	dbj|AB091070.1| Zinnia elegans ZCP4 mRNA for cysteine proteinase...	46	0.11
107	gb|U19267.1|ZEU19267 Zinnia elegans cysteine proteinase mRNA, co...	46	0.11
108	gb|AY192360.1| Trifolium repens cysteine protease 14 gene, compl...	44	0.42
109	emb|CR659308.2|CNS0F7OY Tetraodon nigroviridis full-length cDNA	44	0.42
110	emb|Z99173.1|NTCYSTPRO Nicotiana tabacum mRNA for cysteine prote...	44	0.42
111	emb|Z69344.1|HCCYSPDM3 Haemonchus contortus mRNa for cysteine pr...	44	0.42
112	gb|AF462309.1| Acanthamoeba healyi cysteine proteinase (CP1) mRN...	44	0.42
113	gb|AY017413.1| Nicotiana tabacum CPR1-like cysteine proteinase g...	44	0.42
114	dbj|AB098628.1| Daucus carota DcCysP5 mRNA for cysteine protease...	44	0.42
115	dbj|AK113507.1| Ciona intestinalis cDNA, clone:ciad065i07, full ...	44	0.42
116	ref|NM_117203.3| Arabidopsis thaliana cysteine-type endopeptidas...	42	1.6
117	ref|NM_119701.2| Arabidopsis thaliana XCP1 (XYLEM CYSTEINE PEPTI...	42	1.6
118	ref|NM_202958.1| Arabidopsis thaliana XCP1 (XYLEM CYSTEINE PEPTI...	42	1.6
119	ref|NM_101938.2| Arabidopsis thaliana XCP2 (XYLEM CYSTEINE PEPTI...	42	1.6
120	gb|AY662992.1| Petunia x hybrida cysteine proteinase (CP6) mRNA,...	42	1.6
121	gb|AY192361.1| Trifolium repens cysteine protease 14 mRNA, compl...	42	1.6
122	gb|AY333290.1| Branchiostoma lanceolatum isolate Brla-alpha929 c...	42	1.6
123	gb|AY829805.1| Lonomia obliqua cysteine peptidase 1 cathepsin-L-...	42	1.6
124	gb|AC148981.7| Mus musculus BAC clone RP23-201L15 from chromosom...	42	1.6
125	emb|X80990.1|NNCATLS N.norvegicus mRNA for cathepsin L	42	1.6
126	gb|AY051062.1| Arabidopsis thaliana putative cysteine proteinase...	42	1.6
127	gb|AY035055.1| Arabidopsis thaliana putative cysteine proteinase...	42	1.6
128	emb|AJ004958.1|PSA004958 Pisum sativum mRNA for TPE4A thiol-prot...	42	1.6
129	emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, ...	42	1.6
130	emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, ...	42	1.6
131	emb|AL096882.2|ATF8L21 Arabidopsis thaliana DNA chromosome 4, BA...	42	1.6
132	emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, B...	42	1.6
133	gb|AC096543.2| Homo sapiens chromosome 1 clone RP11-335E6, compl...	42	1.6
134	emb|BX827844.1|CNS0A31A Arabidopsis thaliana Full-length cDNA Co...	42	1.6
135	emb|BX827227.1|CNS0A2UJ Arabidopsis thaliana Full-length cDNA Co...	42	1.6
136	emb|BX828945.1|CNS0A2LF Arabidopsis thaliana Full-length cDNA Co...	42	1.6
137	dbj|AB057372.1| Daucus carota CSCP gene for cysteine proteinase,...	42	1.6
138	gb|BT005179.1| Arabidopsis thaliana clone U50467 unknown protein...	42	1.6
139	gb|BT004822.1| Arabidopsis thaliana At1g20850 gene, complete cds	42	1.6
140	gb|AY089180.1| Arabidopsis thaliana clone 6307 mRNA, complete se...	42	1.6
141	gb|AC010913.9| Homo sapiens BAC clone RP11-44N22 from 2, complet...	42	1.6
142	gb|AF191028.1|AF191028 Arabidopsis thaliana papain-type cysteine...	42	1.6
143	gb|AF191027.1|AF191027 Arabidopsis thaliana papain-type cysteine...	42	1.6
144	gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana...	42	1.6
145	dbj|AK117394.1| Arabidopsis thaliana At4g35350 mRNA for putative...	42	1.6
146	dbj|AP004984.1| Lotus japonicus genomic DNA, chromosome 1, clone...	42	1.6
147	gb|AC007369.2| Arabidopsis thaliana chromosome I BAC F9H16 genom...	42	1.6
148	gb|AY700586.1| Zingiber officinale cysteine protease gp2b mRNA, ...	40	6.5
149	gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, c...	40	6.5
150	gb|AC115924.11| Mus musculus chromosome 15, clone RP24-511O11, c...	40	6.5
151	gb|AC010176.12| Homo sapiens 12 BAC RP11-711K1 (Roswell Park Can...	40	6.5
152	gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome	40	6.5
153	emb|AL022724.2|HS413H6 Human DNA sequence from clone RP3-413H6 o...	40	6.5
154	ref|XM_963527.1| PREDICTED: Tribolium castaneum similar to Succi...	40	6.5
155	emb|Z99952.1|PVZ99952 Phaseolus vulgaris Moldavian encoding cyst...	40	6.5
156	emb|X82011.2|CACPMRNA Cicer arietinum mRNA for cysteine proteinase	40	6.5
157	emb|X70375.1|CATHIPA C.arietinum mRNA for thiol protease	40	6.5
158	emb|AL596024.5| Zebrafish DNA sequence from clone BUSM1-199M19 i...	40	6.5
159	emb|AJ583512.1| Diabrotica virgifera virgifera mRNA for cathepsi...	40	6.5
160	emb|AJ245924.1|STU245924 Solanum tuberosum mRNA for cysteine pro...	40	6.5
161	emb|AJ224766.1|PVA224766 Phaseolus vulgaris mRNA for cotyledon c...	40	6.5
162	emb|AL954696.17| Zebrafish DNA sequence from clone CH211-234K4, ...	40	6.5
163	gb|AC109518.6| Homo sapiens BAC clone RP11-492P11 from 4, comple...	40	6.5
164	gb|AF320565.1|AF320565 Rhodnius prolixus cathepsine L-like cyste...	40	6.5
165	gb|AE009945.1|AE009945 Pyrobaculum aerophilum strain IM2 section...	40	6.5
166	gb|AY277910.1| Branchiostoma belcheri tsingtaunese cathepsin L p...	40	6.5
167	gb|AF157961.1|AF157961 Hypera postica cysteine proteinase mRNA, ...	40	6.5
168	dbj|AB098625.1| Daucus carota DcCysP2 mRNA for cysteine protease...	40	6.5
169	gb|AF181567.1|AF181567 Solanum chacoense cysteine protease CYP1 ...	40	6.5
170	gb|AC007189.6|AC007189 Homo sapiens, clone 19_A_8, complete sequ...	40	6.5
171	gb|U52970.1|PVU52970 Phaseolus vulgaris cysteine endopeptidase 1...	40	6.5
172	emb|AL935053.6| Zebrafish DNA sequence from clone CH211-162M14, ...	40	6.5
173	dbj|AB020491.1| Haemaphysalis longicornis mRNA for cathepsin L-l...	40	6.5

---

>ref|XM_474131.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1377

 Score =  289 bits (146), Expect = 4e-75
 Identities = 335/398 (84%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
           ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 538 gagctagttgactgtgacacttcatataacgagggatgcaatggaggtctgatggactat 597

                                                                       
Query: 63  gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaag 122
           |||||||| |||||||| ||||||||||| || ||| | ||||| |||||||| ||||| 
Sbjct: 598 gcatttgatttcatcatcaacaatggtggaatcgacaccgaggatgactacccttacaaa 657

                                                                       
Query: 123 gagagggacaaccgttgcgatgctaacaagaaaaatgccaaggttgttaccattgatggg 182
           |  | |||| | || || || |  |||| |||||| || |||||||| || |||||  | 
Sbjct: 658 ggcaaggacgaacggtgtgacgtaaacaggaaaaacgcaaaggttgtcacaattgacagc 717

                                                                       
Query: 183 tacgaggatgtgcctgtgaacagtgagaagagtctgcaaaaggcagttgcaaaccagccc 242
           ||||| |||||  |    |||||||||| ||||||||| ||||| || ||||||||||||
Sbjct: 718 tacgaagatgtaacaccaaacagtgagacgagtctgcagaaggcggtagcaaaccagccc 777

                                                                       
Query: 243 atcagtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttc 302
            |||||||||| || || || |||||||| |||||||||||||||  |||||||||||||
Sbjct: 778 gtcagtgttgcaattgaagccggtggcagagcattccagctctactcatcgggtatcttc 837

                                                                       
Query: 303 acgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacagag 362
           ||||| |  |||||||||||||| ||||| || ||||| || ||||| || || ||||||
Sbjct: 838 acgggtaaatgtggaacagcactagaccacggcgtcgctgctgttgggtacggcacagag 897

                                                 
Query: 363 aatggcaaggactactggctcgtcaggaactcctgggg 400
           |||||||||||||||||| |||| |||||||| |||||
Sbjct: 898 aatggcaaggactactggatcgtgaggaactcgtgggg 935

---

>dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H09, full
            insert sequence
          Length = 1753

 Score =  289 bits (146), Expect = 4e-75
 Identities = 335/398 (84%)
 Strand = Plus / Plus

                                                                        
Query: 3    gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
            ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 603  gagctagttgactgtgacacttcatataacgagggatgcaatggaggtctgatggactat 662

                                                                        
Query: 63   gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaag 122
            |||||||| |||||||| ||||||||||| || ||| | ||||| |||||||| ||||| 
Sbjct: 663  gcatttgatttcatcatcaacaatggtggaatcgacaccgaggatgactacccttacaaa 722

                                                                        
Query: 123  gagagggacaaccgttgcgatgctaacaagaaaaatgccaaggttgttaccattgatggg 182
            |  | |||| | || || || |  |||| |||||| || |||||||| || |||||  | 
Sbjct: 723  ggcaaggacgaacggtgtgacgtaaacaggaaaaacgcaaaggttgtcacaattgacagc 782

                                                                        
Query: 183  tacgaggatgtgcctgtgaacagtgagaagagtctgcaaaaggcagttgcaaaccagccc 242
            ||||| |||||  |    |||||||||| ||||||||| ||||| || ||||||||||||
Sbjct: 783  tacgaagatgtaacaccaaacagtgagacgagtctgcagaaggcggtagcaaaccagccc 842

                                                                        
Query: 243  atcagtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttc 302
             |||||||||| || || || |||||||| |||||||||||||||  |||||||||||||
Sbjct: 843  gtcagtgttgcaattgaagccggtggcagagcattccagctctactcatcgggtatcttc 902

                                                                        
Query: 303  acgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacagag 362
            ||||| |  |||||||||||||| ||||| || ||||| || ||||| || || ||||||
Sbjct: 903  acgggtaaatgtggaacagcactagaccacggcgtcgctgctgttgggtacggcacagag 962

                                                  
Query: 363  aatggcaaggactactggctcgtcaggaactcctgggg 400
            |||||||||||||||||| |||| |||||||| |||||
Sbjct: 963  aatggcaaggactactggatcgtgaggaactcgtgggg 1000

---

>dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065M08, full
            insert sequence
          Length = 1774

 Score =  289 bits (146), Expect = 4e-75
 Identities = 335/398 (84%)
 Strand = Plus / Plus

                                                                        
Query: 3    gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
            ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 603  gagctagttgactgtgacacttcatataacgagggatgcaatggaggtctgatggactat 662

                                                                        
Query: 63   gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaag 122
            |||||||| |||||||| ||||||||||| || ||| | ||||| |||||||| ||||| 
Sbjct: 663  gcatttgatttcatcatcaacaatggtggaatcgacaccgaggatgactacccttacaaa 722

                                                                        
Query: 123  gagagggacaaccgttgcgatgctaacaagaaaaatgccaaggttgttaccattgatggg 182
            |  | |||| | || || || |  |||| |||||| || |||||||| || |||||  | 
Sbjct: 723  ggcaaggacgaacggtgtgacgtaaacaggaaaaacgcaaaggttgtcacaattgacagc 782

                                                                        
Query: 183  tacgaggatgtgcctgtgaacagtgagaagagtctgcaaaaggcagttgcaaaccagccc 242
            ||||| |||||  |    |||||||||| ||||||||| ||||| || ||||||||||||
Sbjct: 783  tacgaagatgtaacaccaaacagtgagacgagtctgcagaaggcggtagcaaaccagccc 842

                                                                        
Query: 243  atcagtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttc 302
             |||||||||| || || || |||||||| |||||||||||||||  |||||||||||||
Sbjct: 843  gtcagtgttgcaattgaagccggtggcagagcattccagctctactcatcgggtatcttc 902

                                                                        
Query: 303  acgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacagag 362
            ||||| |  |||||||||||||| ||||| || ||||| || ||||| || || ||||||
Sbjct: 903  acgggtaaatgtggaacagcactagaccacggcgtcgctgctgttgggtacggcacagag 962

                                                  
Query: 363  aatggcaaggactactggctcgtcaggaactcctgggg 400
            |||||||||||||||||| |||| |||||||| |||||
Sbjct: 963  aatggcaaggactactggatcgtgaggaactcgtgggg 1000

---

>gb|AF019147.1|AF019147 Zea mays cysteine proteinase Mir3 (mir3) mRNA, complete cds
          Length = 1830

 Score =  278 bits (140), Expect = 2e-71
 Identities = 335/400 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    aagagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggact 60
            |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 655  aagagcttgtcgactgtgacacttcatacaatcaggggtgcaatggaggtctgatggact 714

                                                                        
Query: 61   atgcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctaca 120
            |||| |||||||||||||| |||||||| || || ||| | ||| |||| ||||| ||||
Sbjct: 715  atgcgtttgagttcatcatcaacaatggcggaatcgacaccgagaaggattacccttaca 774

                                                                        
Query: 121  aggagagggacaaccgttgcgatgctaacaagaaaaatgccaaggttgttaccattgatg 180
            |||  | ||||   || || ||||  |||| |||||| || ||||||||||| |||||  
Sbjct: 775  agggcacggacggacggtgtgatgtcaacaggaaaaacgcgaaggttgttactattgaca 834

                                                                        
Query: 181  ggtacgaggatgtgcctgtgaacagtgagaagagtctgcaaaaggcagttgcaaaccagc 240
            | ||||| ||||| || | ||||  ||||||||||||||| |||||||||||||||||||
Sbjct: 835  gctacgaagatgtaccagcgaacgatgagaagagtctgcagaaggcagttgcaaaccagc 894

                                                                        
Query: 241  ccatcagtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatct 300
            |  ||||||| || || ||||||| |||||  ||||| ||||||||||  ||||||||||
Sbjct: 895  ctgtcagtgtcgcaattgaggctgctggcacagcatttcagctctacagctcgggtatct 954

                                                                        
Query: 301  tcacgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacag 360
            |||| |||| ||||||||||   || |||||||||||| | ||||| || || || ||||
Sbjct: 955  tcactggaagctgtggaacacggctggaccatggtgtcacggccgtcggctacgggacag 1014

                                                    
Query: 361  agaatggcaaggactactggctcgtcaggaactcctgggg 400
            |||| ||||||||||||||| |||| | |||||| |||||
Sbjct: 1015 agaacggcaaggactactggatcgtgaagaactcatgggg 1054

---

>gb|AY103676.1| Zea mays PCO102242 mRNA sequence
          Length = 1878

 Score =  274 bits (138), Expect = 2e-70
 Identities = 333/398 (83%)
 Strand = Plus / Plus

                                                                        
Query: 3    gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
            ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 692  gagcttgttgactgtgacacttcatacaaccaggggtgcaatggaggtttgatggactat 751

                                                                        
Query: 63   gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaag 122
            || |||||||||||||| ||||| || || || ||| | ||| |||| ||||| ||||||
Sbjct: 752  gcgtttgagttcatcatcaacaacggcggaatcgacaccgagaaggattacccttacaag 811

                                                                        
Query: 123  gagagggacaaccgttgcgatgctaacaagaaaaatgccaaggttgttaccattgatggg 182
            |  | ||||   || || ||||  |||| |||||| || |||||||| || |||||  | 
Sbjct: 812  ggcacggacggacggtgtgatgtcaacaggaaaaacgcgaaggttgtcactattgacagc 871

                                                                        
Query: 183  tacgaggatgtgcctgtgaacagtgagaagagtctgcaaaaggcagttgcaaaccagccc 242
            ||||| ||||| || | ||||  ||||||||||||||| |||||||||||||||||||| 
Sbjct: 872  tacgaagatgtaccagcgaacgatgagaagagtctgcagaaggcagttgcaaaccagcct 931

                                                                        
Query: 243  atcagtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttc 302
             ||||||| || || ||||||| |||||  ||||| ||||||||||  ||||||||||||
Sbjct: 932  gtcagtgtcgcaattgaggctgctggcacagcatttcagctctacagctcgggtatcttc 991

                                                                        
Query: 303  acgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacagag 362
            || |||| ||||||||||||  | |||||||||||| | ||||| || || || ||||||
Sbjct: 992  actggaagctgtggaacagcgttggaccatggtgtcacggccgtcggctacgggacagag 1051

                                                  
Query: 363  aatggcaaggactactggctcgtcaggaactcctgggg 400
            || ||||||||||||||| |||| | |||||| |||||
Sbjct: 1052 aacggcaaggactactggatcgtgaagaactcttgggg 1089

---

>dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) mRNA for oryzain alpha,
           complete cds
          Length = 1929

 Score =  274 bits (138), Expect = 2e-70
 Identities = 333/398 (83%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
           ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 583 gagctagttgactgtgacacttcatataacgagggatgcaatggaggtctgatggactat 642

                                                                       
Query: 63  gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaag 122
           |||||||| |||||||| ||||||||||| || ||| | ||||| |||||||| ||||| 
Sbjct: 643 gcatttgatttcatcatcaacaatggtggaatcgacaccgaggatgactacccttacaaa 702

                                                                       
Query: 123 gagagggacaaccgttgcgatgctaacaagaaaaatgccaaggttgttaccattgatggg 182
           |  | |||| | || || || |  |||| |||||| || |||||||| || |||||  | 
Sbjct: 703 ggcaaggacgaacggtgtgacgtaaacaggaaaaacgcaaaggttgtcacaattgacagc 762

                                                                       
Query: 183 tacgaggatgtgcctgtgaacagtgagaagagtctgcaaaaggcagttgcaaaccagccc 242
           ||||| |||||  |    |||||||||| ||||||||| ||||| ||   ||||||||||
Sbjct: 763 tacgaagatgtaacaccaaacagtgagacgagtctgcagaaggcggtacgaaaccagccc 822

                                                                       
Query: 243 atcagtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttc 302
            |||||||||| || || || |||||||| |||||||||||||||  |||||||||||||
Sbjct: 823 gtcagtgttgcaattgaagccggtggcagagcattccagctctactcatcgggtatcttc 882

                                                                       
Query: 303 acgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacagag 362
           ||||| |  |||||||||||||| ||||| || ||||| || ||||| || || ||||||
Sbjct: 883 acgggtaaatgtggaacagcactagaccacggcgtcgctgctgttgggtacggcacagag 942

                                                 
Query: 363 aatggcaaggactactggctcgtcaggaactcctgggg 400
           |||||||||||||||||| |||| |||||||| |||||
Sbjct: 943 aatggcaaggactactggatcgtgaggaactcgtgggg 980

---

>dbj|AB020961.1| Zea mays mRNA for cysteine protease component of protease-inhibitor
            complex, complete cds
          Length = 1828

 Score =  262 bits (132), Expect = 9e-67
 Identities = 333/400 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    aagagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggact 60
            |||||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 654  aagagcttgtcgactgtgacacttcgtacaatcaggggtgcaatggaggtctgatggact 713

                                                                        
Query: 61   atgcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctaca 120
            ||||||||||||||||||| |||||||| || || ||| | ||| |||| ||||| ||||
Sbjct: 714  atgcatttgagttcatcatcaacaatggcggaatcgacaccgagaaggattacccttaca 773

                                                                        
Query: 121  aggagagggacaaccgttgcgatgctaacaagaaaaatgccaaggttgttaccattgatg 180
            |||  | ||||   || || ||||  |||| |||||| || |||||||| || |||||  
Sbjct: 774  agggcacggacggacggtgtgatgtcaacaggaaaaacgcgaaggttgtcactattgaca 833

                                                                        
Query: 181  ggtacgaggatgtgcctgtgaacagtgagaagagtctgcaaaaggcagttgcaaaccagc 240
            | ||||| ||||| || | ||||  ||| ||||||||||| |||||||||||||||||||
Sbjct: 834  gctacgaagatgtaccagcgaacgatgaaaagagtctgcagaaggcagttgcaaaccagc 893

                                                                        
Query: 241  ccatcagtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatct 300
            |  ||||||| || || ||||||| |||||    ||| ||||||||||  ||||||||||
Sbjct: 894  ctgtcagtgtcgcaattgaggctgctggcacacaatttcagctctacagctcgggtatct 953

                                                                        
Query: 301  tcacgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacag 360
            |||| |||| |||||||||||| || |||||||||||| | ||||| || || || ||||
Sbjct: 954  tcactggaagctgtggaacagcgctggaccatggtgtcacggccgtcggctacgggacag 1013

                                                    
Query: 361  agaatggcaaggactactggctcgtcaggaactcctgggg 400
            |||| ||||||||||||||| |||| | |||||| |||||
Sbjct: 1014 agaacggcaaggactactggatcgtgaagaactcatgggg 1053

---

>dbj|AK061729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B12, full
           insert sequence
          Length = 976

 Score =  190 bits (96), Expect = 3e-45
 Identities = 174/200 (87%)
 Strand = Plus / Plus

                                                                       
Query: 201 aacagtgagaagagtctgcaaaaggcagttgcaaaccagcccatcagtgttgcgatcgag 260
           |||||||||| ||||||||| ||||| || |||||||||||| |||||||||| || || 
Sbjct: 3   aacagtgagacgagtctgcagaaggcggtagcaaaccagcccgtcagtgttgcaattgaa 62

                                                                       
Query: 261 gctggtggcagggcattccagctctacaaatcgggtatcttcacgggaacctgtggaaca 320
           || |||||||| |||||||||||||||  |||||||||||||||||| |  |||||||||
Sbjct: 63  gccggtggcagagcattccagctctactcatcgggtatcttcacgggtaaatgtggaaca 122

                                                                       
Query: 321 gcacttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
           ||||| ||||| || ||||| || ||||| || || ||||||||||||||||||||||||
Sbjct: 123 gcactagaccacggcgtcgctgctgttgggtacggcacagagaatggcaaggactactgg 182

                               
Query: 381 ctcgtcaggaactcctgggg 400
            |||| |||||||| |||||
Sbjct: 183 atcgtgaggaactcgtgggg 202

---

>gb|AF134152.1|AF134152 Hordeum vulgare cysteine protease mRNA, partial cds
          Length = 439

 Score =  159 bits (80), Expect = 1e-35
 Identities = 152/176 (86%)
 Strand = Plus / Plus

                                                                       
Query: 201 aacagtgagaagagtctgcaaaaggcagttgcaaaccagcccatcagtgttgcgatcgag 260
           |||||||||| ||||||||| ||||| || |||||||||||| |||||||||| || || 
Sbjct: 264 aacagtgagacgagtctgcagaaggcggtagcaaaccagcccgtcagtgttgcaattgaa 323

                                                                       
Query: 261 gctggtggcagggcattccagctctacaaatcgggtatcttcacgggaacctgtggaaca 320
           || |||||||| |||||||||||||||  |||||||||||||||||| |  |||||||||
Sbjct: 324 gccggtggcagagcattccagctctactcatcgggtatcttcacgggtaaatgtggaaca 383

                                                                   
Query: 321 gcacttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggacta 376
           ||||| || || || ||||| || ||||| || || ||||||||||||||||||||
Sbjct: 384 gcactagatcacggcgtcgctgctgttgggtacggcacagagaatggcaaggacta 439



 Score =  141 bits (71), Expect = 2e-30
 Identities = 107/119 (89%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
           ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 66  gagctagttgactgtgacacttcatataacgagggatgcaatggaggtctgatggactat 125

                                                                      
Query: 63  gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaa 121
           |||||||| |||||||| ||| ||||||| || ||| | ||||| |||||||| |||||
Sbjct: 126 gcatttgatttcatcatcaactatggtggaatcgaccccgaggatgactacccttacaa 184

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  149 bits (75), Expect = 1e-32
 Identities = 108/119 (90%)
 Strand = Plus / Minus

                                                                            
Query: 3        gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
                ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 33159243 gagctagttgactgtgacacttcatataacgagggatgcaatggaggtctgatggactat 33159184

                                                                           
Query: 63       gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaa 121
                |||||||| |||||||| ||||||||||| || ||| | ||||| |||||||| |||||
Sbjct: 33159183 gcatttgatttcatcatcaacaatggtggaatcgacaccgaggatgactacccttacaa 33159125



 Score =  103 bits (52), Expect = 5e-19
 Identities = 94/108 (87%)
 Strand = Plus / Minus

                                                                            
Query: 293      gggtatcttcacgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggtta 352
                ||||||||||||||| |  |||||||||||||| ||||| || ||||| || ||||| ||
Sbjct: 33158202 gggtatcttcacgggtaaatgtggaacagcactagaccacggcgtcgctgctgttgggta 33158143

                                                                
Query: 353      tggtacagagaatggcaaggactactggctcgtcaggaactcctgggg 400
                 || |||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 33158142 cggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 33158095



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                            
Query: 201      aacagtgagaagagtctgcaaaaggcagttgcaaaccagcccatcagtgttgcgatcgag 260
                |||||||||| ||||||||| ||||| || |||||||||||| |||||||||| || || 
Sbjct: 33158956 aacagtgagacgagtctgcagaaggcggtagcaaaccagcccgtcagtgttgcaattgaa 33158897

                                           
Query: 261      gctggtggcagggcattccagctctac 287
                || |||||||| |||||||||||||||
Sbjct: 33158896 gccggtggcagagcattccagctctac 33158870



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                         
Query: 324      cttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
                |||||||||||||| |  ||||| |||||||| || || |||||||| |||||||||
Sbjct: 34208238 cttgaccatggtgtggttgccgtcggttatggcactgacaatggcaaagactactgg 34208182

---

>dbj|AK121500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022A11, full
           insert sequence
          Length = 752

 Score =  149 bits (75), Expect = 1e-32
 Identities = 108/119 (90%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
           ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 603 gagctagttgactgtgacacttcatataacgagggatgcaatggaggtctgatggactat 662

                                                                      
Query: 63  gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaa 121
           |||||||| |||||||| ||||||||||| || ||| | ||||| |||||||| |||||
Sbjct: 663 gcatttgatttcatcatcaacaatggtggaatcgacaccgaggatgactacccttacaa 721

---

>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete
             sequence
          Length = 118971

 Score =  149 bits (75), Expect = 1e-32
 Identities = 108/119 (90%)
 Strand = Plus / Minus

                                                                         
Query: 3     gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
             ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 49636 gagctagttgactgtgacacttcatataacgagggatgcaatggaggtctgatggactat 49577

                                                                        
Query: 63    gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaa 121
             |||||||| |||||||| ||||||||||| || ||| | ||||| |||||||| |||||
Sbjct: 49576 gcatttgatttcatcatcaacaatggtggaatcgacaccgaggatgactacccttacaa 49518



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 293   gggtatcttcacgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggtta 352
             ||||||||||||||| |  |||||||||||||| || || || ||||| || ||||| ||
Sbjct: 48595 gggtatcttcacgggtaaatgtggaacagcactagatcacggcgtcgctgctgttgggta 48536

                                                             
Query: 353   tggtacagagaatggcaaggactactggctcgtcaggaactcctgggg 400
              || |||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 48535 cggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 48488



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 201   aacagtgagaagagtctgcaaaaggcagttgcaaaccagcccatcagtgttgcgatcgag 260
             |||||||||| ||||||||| ||||| || |||||||||||| |||||||||| || || 
Sbjct: 49349 aacagtgagacgagtctgcagaaggcggtagcaaaccagcccgtcagtgttgcaattgaa 49290

                                        
Query: 261   gctggtggcagggcattccagctctac 287
             || |||||||| |||||||||||||||
Sbjct: 49289 gccggtggcagagcattccagctctac 49263

---

>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02,
             complete sequence
          Length = 165745

 Score =  149 bits (75), Expect = 1e-32
 Identities = 108/119 (90%)
 Strand = Plus / Minus

                                                                         
Query: 3     gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
             ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 41893 gagctagttgactgtgacacttcatataacgagggatgcaatggaggtctgatggactat 41834

                                                                        
Query: 63    gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaa 121
             |||||||| |||||||| ||||||||||| || ||| | ||||| |||||||| |||||
Sbjct: 41833 gcatttgatttcatcatcaacaatggtggaatcgacaccgaggatgactacccttacaa 41775



 Score =  103 bits (52), Expect = 5e-19
 Identities = 94/108 (87%)
 Strand = Plus / Minus

                                                                         
Query: 293   gggtatcttcacgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggtta 352
             ||||||||||||||| |  |||||||||||||| ||||| || ||||| || ||||| ||
Sbjct: 40852 gggtatcttcacgggtaaatgtggaacagcactagaccacggcgtcgctgctgttgggta 40793

                                                             
Query: 353   tggtacagagaatggcaaggactactggctcgtcaggaactcctgggg 400
              || |||||||||||||||||||||||| |||| |||||||| |||||
Sbjct: 40792 cggcacagagaatggcaaggactactggatcgtgaggaactcgtgggg 40745



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 201   aacagtgagaagagtctgcaaaaggcagttgcaaaccagcccatcagtgttgcgatcgag 260
             |||||||||| ||||||||| ||||| || |||||||||||| |||||||||| || || 
Sbjct: 41606 aacagtgagacgagtctgcagaaggcggtagcaaaccagcccgtcagtgttgcaattgaa 41547

                                        
Query: 261   gctggtggcagggcattccagctctac 287
             || |||||||| |||||||||||||||
Sbjct: 41546 gccggtggcagagcattccagctctac 41520

---

>gb|AF454957.1| Brassica oleracea senescence-associated cysteine protease (CP2)
           mRNA, complete cds
          Length = 1699

 Score =  105 bits (53), Expect = 1e-19
 Identities = 86/97 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggact 60
           |||| ||||||||||||||||| || ||||||||||| || ||||||||| ||||||| |
Sbjct: 584 aagaacttgttgactgtgacacatcttacaaccagggttgtaatggaggtttgatggatt 643

                                                
Query: 61  atgcatttgagttcatcattaacaatggtggtattga 97
           |||| ||||| ||||||||||| || |||||||||||
Sbjct: 644 atgcgtttgaattcatcattaaaaacggtggtattga 680



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 234 aaccagcccatcagtgttgcgatcgaggctggtggcagggcattccagctcta 286
           |||||||| || ||||| || ||||| ||||| ||  ||||||||||||||||
Sbjct: 817 aaccagcctattagtgtcgccatcgaagctgggggtcgggcattccagctcta 869



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 152 gaaaaatgccaaggttgttaccattgatgggtacgaggatgtgcctgtgaaca 204
           |||||| || |||||||| || |||||||  || ||||||||||||| |||||
Sbjct: 735 gaaaaacgcaaaggttgtcacaattgatgcctatgaggatgtgcctgagaaca 787

---

>gb|AY526905.1| Pelargonium x hortorum cysteine protease-like protein mRNA, partial
           cds
          Length = 704

 Score =  103 bits (52), Expect = 5e-19
 Identities = 82/92 (89%)
 Strand = Plus / Plus

                                                                       
Query: 30  aaccagggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggt 89
           ||||||||||||||||||||||| ||||||||||| || ||||||||||| || ||||||
Sbjct: 119 aaccagggatgcaatggaggtcttatggactatgctttcgagttcatcatcaaaaatggt 178

                                           
Query: 90  ggtattgactctgaggaggactacccctacaa 121
           |||||||| || || || |||||||| |||||
Sbjct: 179 ggtattgattccgaagaagactacccatacaa 210



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 127/156 (81%)
 Strand = Plus / Plus

                                                                       
Query: 246 agtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttcacg 305
           |||||||| || || ||||||||| ||| |||||| |||||  |||||||||| ||||| 
Sbjct: 335 agtgttgccattgaagctggtggccgggaattccaactctatcaatcgggtatattcaca 394

                                                                       
Query: 306 ggaacctgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacagagaat 365
           |||  |||||||||||| || ||||| ||||| || || ||||| |||||||| || |||
Sbjct: 395 ggacgctgtggaacagctctagaccacggtgtggcagctgttggatatggtacggaaaat 454

                                               
Query: 366 ggcaaggactactggctcgtcaggaactcctggggt 401
           || |  || |||||| | || |||||||| ||||||
Sbjct: 455 ggtatagattactggattgtgaggaactcatggggt 490



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 152 gaaaaatgccaaggttgttaccattgatgggtacgaggatgtgcctg 198
           ||||||||| |||||||||||||| ||||| || || ||||| ||||
Sbjct: 241 gaaaaatgctaaggttgttaccatagatggatatgaagatgtccctg 287

---

>emb|Z99954.1|PVZ99954 Phaseolus vulgaris Moldavian encoding cysteine proteinase precursor
           (clone cp71)
          Length = 1680

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                       
Query: 35  gggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtggtat 94
           |||||||||||||||||| |||||||||||||||||||||||||| || ||||| || ||
Sbjct: 571 gggatgcaatggaggtcttatggactatgcatttgagttcatcataaaaaatggaggcat 630

                                        
Query: 95  tgactctgaggaggactacccctacaagg 123
           ||| || |||||||| || || |||||||
Sbjct: 631 tgattccgaggaggattatccttacaagg 659



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 298 tcttcacgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggttatggta 357
           ||||||| ||||  ||||||||||| || || |||||||| |  || ||||| |||||||
Sbjct: 834 tcttcactggaagatgtggaacagctctagatcatggtgttgtggctgttggatatggta 893

                     
Query: 358 cagagaatgg 367
           |||| |||||
Sbjct: 894 cagacaatgg 903

---

>gb|AY973616.1| Manihot esculenta cysteine protease CP1 mRNA, complete cds
          Length = 1831

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Plus

                                                                       
Query: 36  ggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtggtatt 95
           ||||| ||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 639 ggatgtaatggaggtctaatggactatgcctttgagttcatcatcaacaatggtggaatt 698

                         
Query: 96  gactctgaggagga 109
           ||| |||| |||||
Sbjct: 699 gacactgaagagga 712



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 152 gaaaaatgccaaggttgttaccattgatgggtacgaggatgtgcctgtgaacagtgaga 210
           |||||| |||||||||||||| |||||||  || || ||||| ||||||||||||||||
Sbjct: 755 gaaaaacgccaaggttgttacaattgatgattatgaagatgttcctgtgaacagtgaga 813

---

>dbj|AB109186.1| Helianthus annuus scp1 mRNA for cysteine protease-1, complete cds
          Length = 1589

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 96/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
           ||||||||  ||||||| || || |||||||| || |||||||||||||| |||||||||
Sbjct: 605 gagcttgtgaactgtgatacatcttacaaccaagggtgcaatggaggtcttatggactat 664

                                                                
Query: 63  gcatttgagttcatcattaacaatggtggtattgactctgaggaggactaccc 115
           || |||||||||||||| || || |||||||| ||| | || || ||||||||
Sbjct: 665 gcttttgagttcatcatcaaaaacggtggtatcgacaccgaagaagactaccc 717



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 147 aacaagaaaaatgccaaggttgttaccattgatgggtacgaggatgt 193
           ||||||||||| || |||||||||||||| ||| | ||||| |||||
Sbjct: 749 aacaagaaaaacgcaaaggttgttaccatcgatagttacgaagatgt 795

---

>gb|AY251055.1| Anthurium andraeanum senescence-associated cysteine protease mRNA,
           complete cds
          Length = 1703

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 154/191 (80%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
           ||||| ||||| ||||||||| | |||||| |||| ||||| ||||| || |||||||||
Sbjct: 606 gagctagttgattgtgacactgcctacaacgagggctgcaacggagggctcatggactat 665

                                                                       
Query: 63  gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctacaag 122
           || ||  ||||||||||   ||||||||| || ||| | |||||||| ||||||||||||
Sbjct: 666 gccttccagttcatcatctccaatggtggcatcgacaccgaggaggattacccctacaag 725

                                                                       
Query: 123 gagagggacaaccgttgcgatgctaacaagaaaaatgccaaggttgttaccattgatggg 182
           ||  | ||    |  |||||| | |||| |||||| |||||||||||  ||||||||  |
Sbjct: 726 gaacgcgatgggctgtgcgatcccaacaggaaaaacgccaaggttgtctccattgattcg 785

                      
Query: 183 tacgaggatgt 193
           |||||||||||
Sbjct: 786 tacgaggatgt 796



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 77/92 (83%)
 Strand = Plus / Plus

                                                                        
Query: 351  tatggtacagagaatggcaaggactactggctcgtcaggaactcctggggtagcgtctgg 410
            ||||| || |||| ||| |||||||||||| |||| |||||||| |||||||    ||||
Sbjct: 954  tatggcacggagagtgggaaggactactggatcgtgaggaactcgtggggtaaaagctgg 1013

                                            
Query: 411  ggagaggatggttacatccggatggagcgtaa 442
            ||||||| ||| |||||| | |||||||||||
Sbjct: 1014 ggagaggctggatacatcagaatggagcgtaa 1045

---

>gb|AF259983.1|AF259983 Ipomoea batatas putative cysteine protease mRNA, complete cds
          Length = 1751

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                       
Query: 3   gagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactat 62
           |||||||| || ||||| || ||||| ||| | || |||||||| ||||| |||||||||
Sbjct: 595 gagcttgtggattgtgatacatcatataacgaaggctgcaatggtggtctaatggactat 654

                                                                     
Query: 63  gcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctaca 120
           || || ||||||||||| || ||||||||||||||  ||||||  || ||||||||||
Sbjct: 655 gccttcgagttcatcatcaagaatggtggtattgatactgaggcagattacccctaca 712



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 97/122 (79%)
 Strand = Plus / Plus

                                                                       
Query: 246 agtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttcacg 305
           |||||||| || || ||||||||||| |  ||||| |||||   ||||||||| || || 
Sbjct: 838 agtgttgccattgaagctggtggcagagacttccaactctattcatcgggtatatttact 897

                                                                       
Query: 306 ggaacctgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacagagaat 365
           ||| | ||||||||||  || ||||| |||||  | || ||||| ||||||||||| |||
Sbjct: 898 ggatcatgtggaacagacctggaccacggtgtgactgctgttggatatggtacagaaaat 957

             
Query: 366 gg 367
           ||
Sbjct: 958 gg 959



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 152 gaaaaatgccaaggttgttaccattgatgggtacgaggatgt 193
           ||||||||| ||||| ||| | ||||||||||| ||||||||
Sbjct: 744 gaaaaatgctaaggtcgtttctattgatgggtatgaggatgt 785

---

>dbj|AB098629.1| Daucus carota DcCysP6 mRNA for cysteine protease, complete cds
          Length = 1748

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 138/171 (80%)
 Strand = Plus / Plus

                                                                        
Query: 231  gcaaaccagcccatcagtgttgcgatcgaggctggtggcagggcattccagctctacaaa 290
            ||||||||||| ||||||||||| || || ||| ||||||| |  |||||| ||||  | 
Sbjct: 831  gcaaaccagcctatcagtgttgctattgaagctagtggcagagatttccagttctatgat 890

                                                                        
Query: 291  tcgggtatcttcacgggaacctgtggaacagcacttgaccatggtgtcgccgccgttggt 350
            |||||||| || |||||||  ||||| | |||||| ||||||||||| |  |  ||||| 
Sbjct: 891  tcgggtatatttacgggaaaatgtgggatagcactggaccatggtgtggtggttgttgga 950

                                                               
Query: 351  tatggtacagagaatggcaaggactactggctcgtcaggaactcctggggt 401
            ||||||||||| ||||| || || |||||| | || |||||||| ||||||
Sbjct: 951  tatggtacagaaaatggtaaagattactggattgtgaggaactcatggggt 1001



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 72/87 (82%)
 Strand = Plus / Plus

                                                                       
Query: 12  gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgag 71
           ||||||||||  ||||||||  | || || ||||||||||| |||||||| || ||||| 
Sbjct: 612 gactgtgacagatcatacaatgaaggttgtaatggaggtctcatggactacgcttttgaa 671

                                      
Query: 72  ttcatcattaacaatggtggtattgac 98
           ||||| || |||||||| || ||||||
Sbjct: 672 ttcattatcaacaatggcggcattgac 698

---

>ref|NM_103612.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type
           peptidase AT1G47128 mRNA, complete cds
          Length = 1764

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgagttc 74
           |||||||||||||||||| | || || || |||||||| ||||||||||| |||||||||
Sbjct: 635 tgtgacacttcatacaacgaaggttgtaacggaggtcttatggactatgcttttgagttc 694

                            
Query: 75  atcattaacaatggtgg 91
           || || || ||||||||
Sbjct: 695 attatcaagaatggtgg 711

---

>gb|AY133781.1| Arabidopsis thaliana clone U11707 putative cysteine proteinase
           RD21A (At1g47128) mRNA, complete cds
          Length = 1420

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgagttc 74
           |||||||||||||||||| | || || || |||||||| ||||||||||| |||||||||
Sbjct: 574 tgtgacacttcatacaacgaaggttgtaacggaggtcttatggactatgcttttgagttc 633

                            
Query: 75  atcattaacaatggtgg 91
           || || || ||||||||
Sbjct: 634 attatcaagaatggtgg 650

---

>gb|AY072130.1| Arabidopsis thaliana putative cysteine proteinase RD21A (At1g47128)
           mRNA, complete cds
          Length = 1656

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgagttc 74
           |||||||||||||||||| | || || || |||||||| ||||||||||| |||||||||
Sbjct: 634 tgtgacacttcatacaacgaaggttgtaacggaggtcttatggactatgcttttgagttc 693

                            
Query: 75  atcattaacaatggtgg 91
           || || || ||||||||
Sbjct: 694 attatcaagaatggtgg 710

---

>dbj|AB252653.1| Platycodon grandiflorus PgCP1 mRNA for cysteine proteinase,
           complete cds
          Length = 1676

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                       
Query: 43  atggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattgactctg 102
           |||| ||||| |||||||||| |||||| |||||||| |||||||||||||||||| |||
Sbjct: 616 atggtggtctcatggactatggatttgaattcatcatcaacaatggtggtattgacactg 675

            
Query: 103 a 103
           |
Sbjct: 676 a 676



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 152 gaaaaatgccaaggttgttaccattgat 179
           ||||||||||||||||||||||||||||
Sbjct: 725 gaaaaatgccaaggttgttaccattgat 752

---

>gb|AY081730.1| Arabidopsis thaliana F2G19.31/F2G19.31 mRNA, complete cds
          Length = 1389

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgagttc 74
           |||||||||||||||||| | || || || |||||||| ||||||||||| |||||||||
Sbjct: 574 tgtgacacttcatacaacgaaggttgtaacggaggtcttatggactatgcttttgagttc 633

                            
Query: 75  atcattaacaatggtgg 91
           || || || ||||||||
Sbjct: 634 attatcaagaatggtgg 650

---

>dbj|AK221689.1| Arabidopsis thaliana mRNA for cysteine proteinase RD21A, complete
           cds, clone: RAFL14-97-J18
          Length = 1644

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgagttc 74
           |||||||||||||||||| | || || || |||||||| ||||||||||| |||||||||
Sbjct: 634 tgtgacacttcatacaacgaaggttgtaacggaggtcttatggactatgcttttgagttc 693

                            
Query: 75  atcattaacaatggtgg 91
           || || || ||||||||
Sbjct: 694 attatcaagaatggtgg 710

---

>gb|AY039606.1| Arabidopsis thaliana F2G19.31/F2G19.31 mRNA, complete cds
          Length = 1604

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgagttc 74
           |||||||||||||||||| | || || || |||||||| ||||||||||| |||||||||
Sbjct: 632 tgtgacacttcatacaacgaaggttgtaacggaggtcttatggactatgcttttgagttc 691

                            
Query: 75  atcattaacaatggtgg 91
           || || || ||||||||
Sbjct: 692 attatcaagaatggtgg 708

---

>emb|BX813570.1|CNS0AELE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB24ZH01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1327

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                       
Query: 15  tgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgagttc 74
           |||||||||||||||||| | || || || |||||||| ||||||||||| |||||||||
Sbjct: 613 tgtgacacttcatacaacgaaggttgtaacggaggtcttatggactatgcttttgagttc 672

                            
Query: 75  atcattaacaatggtgg 91
           || || || ||||||||
Sbjct: 673 attatcaagaatggtgg 689

---

>gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G19 genomic sequence, complete
              sequence
          Length = 133379

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                          
Query: 15     tgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgagttc 74
              |||||||||||||||||| | || || || |||||||| ||||||||||| |||||||||
Sbjct: 116418 tgtgacacttcatacaacgaaggttgtaacggaggtcttatggactatgcttttgagttc 116359

                               
Query: 75     atcattaacaatggtgg 91
              || || || ||||||||
Sbjct: 116358 attatcaagaatggtgg 116342

---

>dbj|D13043.1|ATHRD21A Arabidopsis thaliana rd21A gene for thiol protease, complete cds
          Length = 4161

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                        
Query: 15   tgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgagttc 74
            |||||||||||||||||| | || || || |||||||| ||||||||||| |||||||||
Sbjct: 2429 tgtgacacttcatacaacgaaggttgtaacggaggtcttatggactatgcttttgagttc 2488

                             
Query: 75   atcattaacaatggtgg 91
            || || || ||||||||
Sbjct: 2489 attatcaagaatggtgg 2505

---

>dbj|AB098624.1| Daucus carota DcCysP1 mRNA for cysteine protease, complete cds
          Length = 1768

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                       
Query: 33  cagggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtggt 92
           |||||||||||||| ||||| |||||||||||||||||||| ||  |||| |||||||| 
Sbjct: 728 cagggatgcaatggtggtctcatggactatgcatttgagtttattgttaaaaatggtggc 787

                
Query: 93  attga 97
           |||||
Sbjct: 788 attga 792

---

>emb|X66061.1|PSTHIOL P.sativum mRNA for thiolprotease
          Length = 1820

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 85/100 (85%), Gaps = 1/100 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggact 60
           |||| ||||| |||||||| || ||||| ||  ||||||||||||| || || |||||||
Sbjct: 565 aagaacttgtggactgtgatacatcatataatgagggatgcaatggtggacttatggact 624

                                                   
Query: 61  atgcatttgagttcatcattaacaatggtggtattgactc 100
           |||| |||||||||||||| ||  ||||||| ||||||||
Sbjct: 625 atgcctttgagttcatcatcaa-tatggtggcattgactc 663



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 312 tgtggaacagcacttgaccatggtgt 337
           |||||||||||||| |||||||||||
Sbjct: 876 tgtggaacagcactagaccatggtgt 901

---

>gb|DQ123922.1| Coffea arabica x Coffea canephora clone HT-SSH1-B04 mRNA sequence
          Length = 364

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                      
Query: 54  atggactatgcatttgagttcatcattaacaatggtggtattgactctgaggaggacta 112
           ||||||||||| |||||||||||||| ||||||||||| |||||  ||||||| |||||
Sbjct: 66  atggactatgcgtttgagttcatcatcaacaatggtggcattgatactgaggaagacta 8

---

>gb|U17135.1|DCU17135 Dianthus caryophyllus cysteine proteinase (DCCP1) mRNA, partial cds
          Length = 1628

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 101/123 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggact 60
           ||||||| |||||||||||||| || ||||||   |||||  |||| ||||| |||||||
Sbjct: 435 aagagctcgttgactgtgacacgtcttacaactctggatgtgatggtggtcttatggact 494

                                                                       
Query: 61  atgcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctaca 120
           | || ||    |||||||| |||||||| ||||||||| ||||  |||||||||| ||||
Sbjct: 495 acgctttccgattcatcatcaacaatggcggtattgacactgacaaggactacccttaca 554

              
Query: 121 agg 123
           |||
Sbjct: 555 agg 557



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 276 ttccagctctacaaatcgggtatcttcacgggaacctgtggaacagcacttgaccatggt 335
           ||||| ||||||||||| ||  | |||||||||| |||||| ||  ||||||| ||||||
Sbjct: 710 ttccaactctacaaatctggcgttttcacgggaagctgtggcacgtcacttgatcatggt 769

               
Query: 336 gtcg 339
           ||||
Sbjct: 770 gtcg 773

---

>gb|BT014302.1| Lycopersicon esculentum clone 133553F, mRNA sequence
          Length = 1345

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 67/78 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggact 60
           |||| |||||||||||||||||| || | ||||| ||||||||||||||  |||||||| 
Sbjct: 611 aagaacttgttgactgtgacactacagaaaaccaaggatgcaatggaggattgatggacc 670

                             
Query: 61  atgcatttgagttcatca 78
             |||||||| |||||||
Sbjct: 671 cagcatttgacttcatca 688

---

>gb|AC148098.3| Medicago truncatula clone mth2-15b16, complete sequence
          Length = 97953

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                         
Query: 12    gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgag 71
             |||||||| || ||||||||| | ||||||||||| || || ||||| || || || |||
Sbjct: 72218 gactgtgatacatcatacaacgaaggatgcaatggtggacttatggattacgccttcgag 72159

                                                               
Query: 72    ttcatcattaacaatggtggtattgactctgaggaggactacccctacaa 121
             |||||||| |  |||||||| ||||||||||| || || ||||| |||||
Sbjct: 72158 ttcatcatcagtaatggtggcattgactctgaagatgattacccttacaa 72109



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 312   tgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacaga 361
             |||||||||||||| ||||||||||| || || ||||| || ||||||||
Sbjct: 71175 tgtggaacagcactagaccatggtgttgcagctgttggatacggtacaga 71126



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 217   tgcaaaaggcagttgcaaaccagcc 241
             |||||||||| ||||||||||||||
Sbjct: 71876 tgcaaaaggctgttgcaaaccagcc 71852

---

>gb|AC150207.2| Medicago truncatula chromosome 2 BAC clone mte1-29a5, complete sequence
          Length = 124676

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                         
Query: 12    gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgag 71
             |||||||| || ||||||||| | ||||||||||| || || ||||| || || || |||
Sbjct: 83507 gactgtgatacatcatacaacgaaggatgcaatggtggacttatggattacgccttcgag 83448

                                                               
Query: 72    ttcatcattaacaatggtggtattgactctgaggaggactacccctacaa 121
             |||||||| |  |||||||| ||||||||||| || || ||||| |||||
Sbjct: 83447 ttcatcatcagtaatggtggcattgactctgaagatgattacccttacaa 83398



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 312   tgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacaga 361
             |||||||||||||| ||||||||||| || || ||||| || ||||||||
Sbjct: 82464 tgtggaacagcactagaccatggtgttgcagctgttggatacggtacaga 82415



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 217   tgcaaaaggcagttgcaaaccagcc 241
             |||||||||| ||||||||||||||
Sbjct: 83165 tgcaaaaggctgttgcaaaccagcc 83141

---

>dbj|AB098631.1| Daucus carota DcCysP8 mRNA for cysteine protease, complete cds
          Length = 1884

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                       
Query: 12  gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgag 71
           ||||||||||  ||||||||  |||| |||||||||||||| |||||  |||| ||| | 
Sbjct: 696 gactgtgacagatcatacaatgagggctgcaatggaggtctcatggatgatgcttttcaa 755

                                     
Query: 72  ttcatcattaacaatggtggtattga 97
           |||||||| ||||||||||| |||||
Sbjct: 756 ttcatcatcaacaatggtggcattga 781



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 138/173 (79%), Gaps = 2/173 (1%)
 Strand = Plus / Plus

                                                                        
Query: 230  tgcaaaccagcccatcagtgttgcgatcgaggctggtggcagggcattccagctctacaa 289
            |||||||||||||||||||||||| || || ||  ||||||| |  |||||| ||||  |
Sbjct: 914  tgcaaaccagcccatcagtgttgcaattgaagccagtggcagagatttccagttctatga 973

                                                                        
Query: 290  atcgggtatcttcacgggaacctgtggaacagcactt-gaccatggtgtcgccgccgttg 348
             |||||||| || ||||| |  ||||| || | |||| ||||||||||| |  |  ||||
Sbjct: 974  ctcgggtatatttacggggaaatgtgggac-ggacttggaccatggtgtggtagttgttg 1032

                                                                 
Query: 349  gttatggtacagagaatggcaaggactactggctcgtcaggaactcctggggt 401
            ||||||||||||| || || || || |||||| | || |||||||| ||||||
Sbjct: 1033 gttatggtacagaaaacggtaaagattactggattgtgaggaactcatggggt 1085

---

>ref|NM_123672.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type
           peptidase AT5G43060 mRNA, complete cds
          Length = 1675

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 9   gttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcattt 68
           ||||| |||||||| || || ||||| ||||| ||||| ||| | ||||||||||| |||
Sbjct: 614 gttgattgtgacacatcttataaccaaggatgtaatggtggtttaatggactatgcgttt 673

                                        
Query: 69  gagttcatcattaacaatggtggtattga 97
           ||||| || || || ||||||||||||||
Sbjct: 674 gagtttattatcaaaaatggtggtattga 702



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 147 aacaagaaaaatgccaaggttgttaccattgat 179
           |||| ||||||||| ||||||||||||||||||
Sbjct: 752 aacaggaaaaatgctaaggttgttaccattgat 784

---

>gb|AY114661.1| Arabidopsis thaliana cysteine protease component of
           protease-inhibitor complex (At5g43060) mRNA, complete
           cds
          Length = 1485

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 9   gttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcattt 68
           ||||| |||||||| || || ||||| ||||| ||||| ||| | ||||||||||| |||
Sbjct: 571 gttgattgtgacacatcttataaccaaggatgtaatggtggtttaatggactatgcgttt 630

                                        
Query: 69  gagttcatcattaacaatggtggtattga 97
           ||||| || || || ||||||||||||||
Sbjct: 631 gagtttattatcaaaaatggtggtattga 659



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 147 aacaagaaaaatgccaaggttgttaccattgat 179
           |||| ||||||||| ||||||||||||||||||
Sbjct: 709 aacaggaaaaatgctaaggttgttaccattgat 741

---

>gb|AY062608.1| Arabidopsis thaliana cysteine protease component of
           protease-inhibitor complex (At5g43060; MMG4.7) mRNA,
           complete cds
          Length = 1628

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 9   gttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcattt 68
           ||||| |||||||| || || ||||| ||||| ||||| ||| | ||||||||||| |||
Sbjct: 615 gttgattgtgacacatcttataaccaaggatgtaatggtggtttaatggactatgcgttt 674

                                        
Query: 69  gagttcatcattaacaatggtggtattga 97
           ||||| || || || ||||||||||||||
Sbjct: 675 gagtttattatcaaaaatggtggtattga 703



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 147 aacaagaaaaatgccaaggttgttaccattgat 179
           |||| ||||||||| ||||||||||||||||||
Sbjct: 753 aacaggaaaaatgctaaggttgttaccattgat 785

---

>gb|AF454958.1| Brassica oleracea senescence-associated cysteine protease (CP3)
           mRNA, complete cds
          Length = 1830

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 9   gttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcattt 68
           ||||| |||||||||||||||||  | || || || |||||||| ||||||||||| |||
Sbjct: 576 gttgattgtgacacttcatacaatgaaggttgtaacggaggtctcatggactatgctttt 635

                            
Query: 69  gagttcatcattaacaa 85
           |||||||| || |||||
Sbjct: 636 gagttcattataaacaa 652

---

>dbj|AB008267.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMG4
          Length = 79046

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                         
Query: 9     gttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcattt 68
             ||||| |||||||| || || ||||| ||||| ||||| ||| | ||||||||||| |||
Sbjct: 16812 gttgattgtgacacatcttataaccaaggatgtaatggtggtttaatggactatgcgttt 16753

                                          
Query: 69    gagttcatcattaacaatggtggtattga 97
             ||||| || || || ||||||||||||||
Sbjct: 16752 gagtttattatcaaaaatggtggtattga 16724



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 151   agaaaaatgccaaggttgttaccattgat 179
             |||||||||| ||||||||||||||||||
Sbjct: 16585 agaaaaatgctaaggttgttaccattgat 16557

---

>gb|AF454956.1| Brassica oleracea senescence-associated cysteine protease (CP1)
           mRNA, partial cds
          Length = 1582

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 48  ggtctgatggactatgcatttgagttcatcattaacaatggtggtattgactctgaggag 107
           ||||| ||||||||||| ||| ||||||| |||| |||||||||||||||  ||||||| 
Sbjct: 566 ggtctcatggactatgcttttcagttcattattagcaatggtggtattgatactgaggaa 625

                   
Query: 108 gactaccc 115
           || |||||
Sbjct: 626 gattaccc 633



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 74/92 (80%)
 Strand = Plus / Plus

                                                                       
Query: 246 agtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttcacg 305
           |||||||| || || ||||||||| | |  |||||||| |||||||| ||  | || || 
Sbjct: 764 agtgttgccattgaagctggtggccgaggtttccagctttacaaatcaggggtgtttaca 823

                                           
Query: 306 ggaacctgtggaacagcacttgaccatggtgt 337
           ||||| |||||||||||  | |||||||||||
Sbjct: 824 ggaacatgtggaacagctttggaccatggtgt 855

---

>gb|AF133839.1| Sandersonia aurantiaca papain-like cysteine protease (PRT5) mRNA,
           complete cds
          Length = 1341

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  aaccagggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggt 89
           ||||| ||||||| ||| ||||| ||||||||||| || ||||||||||  |||||||||
Sbjct: 589 aaccaaggatgcagtggtggtctcatggactatgcgttcgagttcatcaagaacaatggt 648

             
Query: 90  gg 91
           ||
Sbjct: 649 gg 650

---

>ref|NM_124405.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type
           peptidase AT5G50260 mRNA, complete cds
          Length = 1541

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 30  aaccagggatgcaatggaggtctgatggactatgcatttgagttcatca 78
           ||||| ||||||||||||||||| ||||||  ||| |||||||||||||
Sbjct: 844 aaccaaggatgcaatggaggtctaatggaccttgcttttgagttcatca 892

---

>gb|AY491402.1| Capsicum annuum cysteine protease mRNA, partial sequence
          Length = 662

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 101/125 (80%)
 Strand = Plus / Plus

                                                                       
Query: 276 ttccagctctacaaatcgggtatcttcacgggaacctgtggaacagcacttgaccatggt 335
           ||||||| |||||||||||||||||| || ||||  ||||| || ||| | || ||||||
Sbjct: 91  ttccagcactacaaatcgggtatctttactggaagatgtggtactgcagtggatcatggt 150

                                                                       
Query: 336 gtcgccgccgttggttatggtacagagaatggcaaggactactggctcgtcaggaactcc 395
           || |  || ||||| |||||||| |||||||| | ||| || ||| | || |||||||| 
Sbjct: 151 gtggttgctgttggatatggtactgagaatggtatggattattggattgtgaggaactcg 210

                
Query: 396 tgggg 400
           |||||
Sbjct: 211 tgggg 215

---

>gb|AY091087.1| Arabidopsis thaliana putative cysteine proteinase (At5g50260) mRNA,
           complete cds
          Length = 1324

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 30  aaccagggatgcaatggaggtctgatggactatgcatttgagttcatca 78
           ||||| ||||||||||||||||| ||||||  ||| |||||||||||||
Sbjct: 610 aaccaaggatgcaatggaggtctaatggaccttgcttttgagttcatca 658

---

>emb|AJ606073.1| Gossypium hirsutum mRNA for cysteine proteinase (cys1 gene), strain
           Xuzhou 142
          Length = 1416

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 153 aaaaatgccaaggttgttaccattgatgggtacgaggatgt 193
           ||||| || |||||||||| |||||||||||||||||||||
Sbjct: 762 aaaaacgctaaggttgttagcattgatgggtacgaggatgt 802

---

>dbj|AB024031.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K6A12
          Length = 64136

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 30    aaccagggatgcaatggaggtctgatggactatgcatttgagttcatca 78
             ||||| ||||||||||||||||| ||||||  ||| |||||||||||||
Sbjct: 50968 aaccaaggatgcaatggaggtctaatggaccttgcttttgagttcatca 51016

---

>gb|AY106278.1| Zea mays PCO137999 mRNA sequence
          Length = 1382

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 126/157 (80%), Gaps = 1/157 (0%)
 Strand = Plus / Plus

                                                                       
Query: 147 aacaagaaaaatgccaaggttgttaccattgatgggtacgaggatgtgcctgtgaacagt 206
           |||| ||||||||||| |||||| | ||| ||||| |  || || ||||||| ||||   
Sbjct: 488 aacaggaaaaatgccagggttgtgagcatcgatggctttgaagacgtgcctgagaacgac 547

                                                                       
Query: 207 gagaagagtctgcaaaaggcagttgcaaaccagccca-tcagtgttgcgatcgaggctgg 265
           ||||||   ||||| ||||| |||||  ||||||||| | || ||||| || ||||| ||
Sbjct: 548 gagaagtcgctgcagaaggcggttgctcaccagcccagttagcgttgccattgaggccgg 607

                                                
Query: 266 tggcagggcattccagctctacaaatcgggtatcttc 302
           |||| |||  ||||||||||||||||||||| |||||
Sbjct: 608 tggccgggagttccagctctacaaatcgggtgtcttc 644



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                       
Query: 324 cttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactggctc 383
           |||||||||||||||| ||| || || || ||  | ||||| || |||||||||||| ||
Sbjct: 667 cttgaccatggtgtcgtcgcggtcggctacggcgccgagaacgggaaggactactggatc 726

                            
Query: 384 gtcaggaactcctgggg 400
           ||| | ||||| |||||
Sbjct: 727 gtccgcaactcgtgggg 743

---

>gb|U41902.1|PMU41902 Pseudosuga menziesii cysteine protease pseudotzain (PM33cysP) mRNA,
           complete cds
          Length = 1882

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 12  gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgc 64
           |||||||| ||||| |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 709 gactgtgatacttcttacaaccaaggatgcaatggcggtctcatggattatgc 761

---

>emb|AJ003137.1|LEAJ3137 Lycopersicon esculentum mRNA for cysteine protease CYP1, complete
           CDS
          Length = 1756

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 261 gctggtggcagggcattccagctctacaaatcgggtatcttcacgggaacctgtggaaca 320
           ||||||||||| |  ||||||| ||||||||| ||||||||||| ||||  ||||| || 
Sbjct: 851 gctggtggcagagacttccagcactacaaatctggtatcttcactggaaaatgtggtact 910

                                                                       
Query: 321 gcacttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
           ||| | || |||||||| |     | ||| |||||||| |||||||||| ||| || |||
Sbjct: 911 gcagtggatcatggtgtagttattgctggatatggtactgagaatggcatggattattgg 970

                               
Query: 381 ctcgtcaggaactcctgggg 400
            |||| |||||||| |||||
Sbjct: 971 atcgttaggaactcatgggg 990



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 gaaaaatgccaaggttgtta 171
           ||||||||||||||||||||
Sbjct: 742 gaaaaatgccaaggttgtta 761

---

>gb|AF172856.1|AF172856 Lycopersicon esculentum cysteine protease TDI-65 (tdi-65) mRNA,
            complete cds
          Length = 1779

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                        
Query: 261  gctggtggcagggcattccagctctacaaatcgggtatcttcacgggaacctgtggaaca 320
            ||||||||||| |  ||||||| ||||||||| ||||||||||| ||||  ||||| || 
Sbjct: 870  gctggtggcagagacttccagcactacaaatctggtatcttcactggaaaatgtggtact 929

                                                                        
Query: 321  gcacttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
            ||| | || |||||||| |     | ||| |||||||| |||||||||| ||| || |||
Sbjct: 930  gcagtggatcatggtgtagttattgctggatatggtactgagaatggcatggattattgg 989

                                
Query: 381  ctcgtcaggaactcctgggg 400
             |||| |||||||| |||||
Sbjct: 990  atcgttaggaactcatgggg 1009



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 gaaaaatgccaaggttgtta 171
           ||||||||||||||||||||
Sbjct: 761 gaaaaatgccaaggttgtta 780

---

>dbj|AP006667.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT31L14, TM0366,
             complete sequence
          Length = 100936

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 312   tgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacagagaatgg 367
             |||||||||| ||||||||| ||||| ||||  ||||| ||||| |||||||||||
Sbjct: 66314 tgtggaacagaacttgaccacggtgtggccgtagttggatatggaacagagaatgg 66369



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 39    tgcaatggaggtctgatggactatgcatttgagttcatca 78
             |||||||||||||| ||||| ||||| |||||||| ||||
Sbjct: 65336 tgcaatggaggtcttatggattatgcttttgagtttatca 65375

---

>gb|M21444.1|TOMLTITP Lycopersicon esculentum low-temperature-induced thiol protease
           mRNA, complete cds
          Length = 1353

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 112/140 (80%)
 Strand = Plus / Plus

                                                                       
Query: 261 gctggtggcagggcattccagctctacaaatcgggtatcttcacgggaacctgtggaaca 320
           ||||||||||| |  ||||||| ||||||||| ||||||||||| ||||  ||||| || 
Sbjct: 463 gctggtggcagagacttccagcactacaaatctggtatcttcactggaaaatgtggtact 522

                                                                       
Query: 321 gcacttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
           ||| | || |||||||| |     | ||| |||||||| |||||||||| ||| || |||
Sbjct: 523 gcagtggatcatggtgtagttattgctggatatggtactgagaatggcatggattattgg 582

                               
Query: 381 ctcgtcaggaactcctgggg 400
            |||| |||||||| |||||
Sbjct: 583 atcgttaggaactcatgggg 602



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 gaaaaatgccaaggttgtta 171
           ||||||||||||||||||||
Sbjct: 354 gaaaaatgccaaggttgtta 373

---

>ref|NM_202612.1| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type
           peptidase AT3G19400 transcript variant AT3G19400.2 mRNA,
           complete cds
          Length = 936

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 43  atggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattga 97
           |||||||| | ||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 626 atggaggtatcatgaactatgcttttgagttcattatgaaaaatggtggtattga 680

---

>ref|NM_112827.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type
           peptidase AT3G19400 transcript variant AT3G19400.1 mRNA,
           complete cds
          Length = 1253

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 43  atggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattga 97
           |||||||| | ||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 626 atggaggtatcatgaactatgcttttgagttcattatgaaaaatggtggtattga 680

---

>emb|AJ278817.1|HVU278817 Hordeum vulgare partial mRNA for putative cysteine protease
           (pCYSPROT gene)
          Length = 412

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 39  tgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattgac 98
           |||||||| ||||| |||||  |||| |||||||||||||| || || ||||| ||||| 
Sbjct: 86  tgcaatgggggtcttatggatgatgcctttgagttcatcataaagaacggtggcattgat 145

                                  
Query: 99  tctgaggaggactacccctacaa 121
            |||| || |||||||| |||||
Sbjct: 146 gctgaagatgactacccttacaa 168

---

>dbj|AB177386.1| Dianthus caryophyllus DC-CP2 mRNA for cysteine proteinase, complete
           cds
          Length = 1564

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 138 tgcgatgctaacaagaaaaatgccaaggttgttaccattgatg 180
           |||||| |||||| |||||||||||||||||| || |||||||
Sbjct: 694 tgcgatactaacaggaaaaatgccaaggttgtgacaattgatg 736

---

>dbj|AB025624.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLD14
          Length = 83097

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 43    atggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattga 97
             |||||||| | ||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 39405 atggaggtatcatgaactatgcttttgagttcattatgaaaaatggtggtattga 39459



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 44    tggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattga 97
             ||||||||| ||||| ||||| ||| ||||||| ||| | || |||||||||||
Sbjct: 36931 tggaggtcttatggattatgcttttaagttcattattgaaaacggtggtattga 36984

---

>dbj|AK118509.1| Arabidopsis thaliana At3g19400 mRNA for putative cysteine
           proteinase RD21A precursor, complete cds, clone:
           RAFL19-74-E13
          Length = 1178

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 43  atggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattga 97
           |||||||| | ||| ||||||| ||||||||||| || || ||||||||||||||
Sbjct: 626 atggaggtatcatgaactatgcttttgagttcattatgaaaaatggtggtattga 680

---

>emb|CR732287.2|CNS0GRZ8 Tetraodon nigroviridis full-length cDNA
          Length = 1496

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                              
Query: 411  ggagaggatggttacatccggatggagcgtaaca 444
            |||||||| |||||||||||||||| ||||||||
Sbjct: 978  ggagaggacggttacatccggatggcgcgtaaca 1011

---

>gb|AY333289.1| Branchiostoma lanceolatum isolate Brla-alpha63 cathepsin mRNA,
           complete cds
          Length = 1402

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 351 tatggtacagagaatggcaaggactactggctcgtcaggaac 392
           |||||||| ||| | |||||||||||||||||||||| ||||
Sbjct: 844 tatggtaccgaggaaggcaaggactactggctcgtcaagaac 885

---

>emb|CR681473.2|CNS0FORX Tetraodon nigroviridis full-length cDNA
          Length = 1435

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 411 ggagaggatggttacatccggatggagcgtaaca 444
           |||||||| |||||||||||||||| ||||||||
Sbjct: 913 ggagaggacggttacatccggatggcgcgtaaca 946

---

>emb|CR667351.2|CNS0FDWD Tetraodon nigroviridis full-length cDNA
          Length = 907

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 411 ggagaggatggttacatccggatggagcgtaaca 444
           |||||||| |||||||||||||||| ||||||||
Sbjct: 367 ggagaggacggttacatccggatggcgcgtaaca 400

---

>emb|CR666538.2|CNS0FD9S Tetraodon nigroviridis full-length cDNA
          Length = 549

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 411 ggagaggatggttacatccggatggagcgtaaca 444
           |||||||| |||||||||||||||| ||||||||
Sbjct: 359 ggagaggacggttacatccggatggcgcgtaaca 392

---

>emb|CR662168.2|CNS0F9WE Tetraodon nigroviridis full-length cDNA
          Length = 558

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 411 ggagaggatggttacatccggatggagcgtaaca 444
           |||||||| |||||||||||||||| ||||||||
Sbjct: 373 ggagaggacggttacatccggatggcgcgtaaca 406

---

>emb|CR659517.2|CNS0F7UR Tetraodon nigroviridis full-length cDNA
          Length = 524

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 411 ggagaggatggttacatccggatggagcgtaaca 444
           |||||||| |||||||||||||||| ||||||||
Sbjct: 359 ggagaggacggttacatccggatggcgcgtaaca 392

---

>ref|XM_965320.1| PREDICTED: Tribolium castaneum similar to Cathepsin L precursor
           (Cysteine proteinase 1) (LOC658974), mRNA
          Length = 1058

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 370 aggactactggctcgtcaggaactcctggggtagcgtctggggaga 415
           ||||||||||| |||||| |||||||||||| ||||  ||||||||
Sbjct: 882 aggactactggatcgtcaagaactcctggggaagcggatggggaga 927

---

>ref|XM_965804.1| PREDICTED: Tribolium castaneum similar to Cathepsin L precursor
           (Cysteine proteinase 1) (LOC659502), mRNA
          Length = 1036

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 370 aggactactggctcgtcaggaactcctggggtagcgtctggggaga 415
           ||||||||||| |||||| |||||||||||| ||||  ||||||||
Sbjct: 863 aggactactggatcgtcaagaactcctggggaagcggatggggaga 908

---

>ref|XM_965745.1| PREDICTED: Tribolium castaneum similar to Cathepsin L precursor
           (Cysteine proteinase 1) (LOC659441), mRNA
          Length = 1084

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 370 aggactactggctcgtcaggaactcctggggtagcgtctggggaga 415
           ||||||||||| |||||| |||||||||||| ||||  ||||||||
Sbjct: 882 aggactactggatcgtcaagaactcctggggaagcggatggggaga 927

---

>emb|X75749.1|VSCYSPRO V.sativa L. mRNA for cysteine protease
          Length = 1361

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 39  tgcaatggaggtctgatggactatgcatttgagttcat 76
           |||||||| || |||||||||||||| |||||||||||
Sbjct: 623 tgcaatggggggctgatggactatgcctttgagttcat 660

---

>emb|X74406.1|HSPSEN102 Hemerocallis sp. mRNA for thiol-protease
          Length = 1320

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 27  tacaaccagggatgcaatggaggtctgatggactatgcatttgagttcat 76
           |||||| ||||||||||||| ||| ||||||| |||||||| || |||||
Sbjct: 592 tacaacgagggatgcaatggtggtttgatggattatgcattcgaattcat 641

---

>gb|DQ455294.1| Medicago truncatula cDNA-AFLP fragment BT11M44_227 sequence
          Length = 481

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 312 tgtggaacagcacttgaccatggtgtcgccgccgttggttatggtacaga 361
           |||||||||||||| ||||||||||| || || ||||| || ||||||||
Sbjct: 297 tgtggaacagcactagaccatggtgttgcagctgttggatacggtacaga 346



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Plus

                                                                       
Query: 24  tcatacaaccagggatgcaatggaggtctgatggactatgcatttgagttcatcattaac 83
           ||||||||| | ||||||||||| || |  ||||| || || || ||||||||||| |  
Sbjct: 9   tcatacaacgaaggatgcaatggtggacatatggattacgccttcgagttcatcatcagt 68

                                                 
Query: 84  aatggtggtattgactctgaggaggactacccctacaa 121
           |||||||| ||||||||||| || || ||||| |||||
Sbjct: 69  aatggtggcattgactctgaagatgattacccttacaa 106



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 217 tgcaaaaggcagttgcaaaccagcc 241
           |||||||||| ||||||||||||||
Sbjct: 202 tgcaaaaggctgttgcaaaccagcc 226

---

>gb|AY034030.1| Alstroemeria hybrid cultivar 'Samora' putative cysteine protease
           mRNA, partial cds
          Length = 338

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 30  aaccagggatgcaatggaggtctgatggactatgcatt 67
           ||||||||||||||||| || || ||||||||||||||
Sbjct: 300 aaccagggatgcaatggcgggctcatggactatgcatt 337

---

>gb|AY881010.1| Nicotiana tabacum cysteine protease (CP2) mRNA, complete cds
          Length = 1300

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagcttgttgactgtgacacttcatacaaccagggatgcaatggaggtctgatggact 60
           |||| ||||||||||||||||||    | ||||| ||||||||||||||  |||||||| 
Sbjct: 550 aagaacttgttgactgtgacactagtcaaaaccaaggatgcaatggagggttgatggaca 609

                             
Query: 61  atgcatttgagttcatca 78
             |||||||| |||||||
Sbjct: 610 tggcatttgaattcatca 627

---

>ref|XM_474291.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1401

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 324 cttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
           |||||||||||||| |  ||||| |||||||| || || |||||||| |||||||||
Sbjct: 898 cttgaccatggtgtggttgccgtcggttatggcactgacaatggcaaagactactgg 954

---

>emb|AJ786770.1| Lubomirskia baicalensis partial mRNA for cathepsin L (catL gene)
          Length = 486

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 33  cagggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtggt 92
           ||||| ||||||||||||||||||||| |||| ||  ||| | |||| || || ||||||
Sbjct: 46  cagggttgcaatggaggtctgatggacaatgctttccagtacgtcatcaagaacggtggt 105

                
Query: 93  attga 97
           |||||
Sbjct: 106 attga 110

---

>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12,
              complete sequence
          Length = 190432

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                       
Query: 324    cttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
              |||||||||||||| |  ||||| |||||||| || || |||||||| |||||||||
Sbjct: 119620 cttgaccatggtgtggttgccgtcggttatggcactgacaatggcaaagactactgg 119564

---

>gb|AY069923.1| Ascaris suum cathepsin L (cpl-1) mRNA, partial cds
          Length = 668

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 39 tgcaatggaggtctgatggactatgcatt 67
          |||||||| ||||||||||||||||||||
Sbjct: 46 tgcaatggtggtctgatggactatgcatt 74

---

>dbj|AB098627.1| Daucus carota DcCysP4 mRNA for cysteine protease, complete cds
          Length = 1668

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 33  cagggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtggt 92
           ||||| |||||||| ||  | ||||||||||| ||||| |||||  |||| |||||||| 
Sbjct: 585 caggggtgcaatggcggcttcatggactatgcctttgaattcattgttaaaaatggtggc 644

                                        
Query: 93  attgactctgaggaggactacccctacaa 121
           |||||  ||||||| || ||||| |||||
Sbjct: 645 attgatactgaggatgattacccttacaa 673



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 246 agtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatctt 301
           |||||||| ||||| || || ||||||||||| || || ||  |||||||||||||
Sbjct: 798 agtgttgcaatcgaagccggaggcagggcatttcaactatatgaatcgggtatctt 853

---

>dbj|AK109371.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E09, full
            insert sequence
          Length = 1766

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 324  cttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
            |||||||||||||| |  ||||| |||||||| || || |||||||| |||||||||
Sbjct: 1002 cttgaccatggtgtggttgccgtcggttatggcactgacaatggcaaagactactgg 1058

---

>dbj|AK099358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I21, full
            insert sequence
          Length = 1742

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 324  cttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
            |||||||||||||| |  ||||| |||||||| || || |||||||| |||||||||
Sbjct: 978  cttgaccatggtgtggttgccgtcggttatggcactgacaatggcaaagactactgg 1034

---

>dbj|AK073373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027D09, full
            insert sequence
          Length = 1753

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 324  cttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
            |||||||||||||| |  ||||| |||||||| || || |||||||| |||||||||
Sbjct: 1003 cttgaccatggtgtggttgccgtcggttatggcactgacaatggcaaagactactgg 1059

---

>gb|AF134153.1|AF134153 Hordeum vulgare cysteine protease mRNA, partial cds
          Length = 490

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 64/77 (83%)
 Strand = Plus / Plus

                                                                       
Query: 324 cttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactggctc 383
           ||||||||||| || |  ||||| |||||||| || || |||||||| ||||||||| ||
Sbjct: 414 cttgaccatggagtggttgccgtcggttatggcactgacaatggcaaagactactggatc 473

                            
Query: 384 gtcaggaactcctgggg 400
           ||| | ||||| |||||
Sbjct: 474 gtccgcaactcttgggg 490



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 61  atgcatttgagttcatcattaacaatggtggtattgactctgaggaggactacccctaca 120
           |||| ||||| ||||||||||| ||||| || |||||  |||| |||||||| || ||||
Sbjct: 151 atgcctttgacttcatcattaagaatggaggcattgatactgaagaggactatccttaca 210

            
Query: 121 a 121
           |
Sbjct: 211 a 211

---

>gb|AF182079.1|AF182079 Matricaria chamomilla thiol protease (ctp) mRNA, complete cds
          Length = 1732

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 344  cgttggttatggtacagagaatggcaaggactactggctcgtcaggaactcctgggg 400
            ||||||||||||| || |  ||||||||||||||||| |||||| ||| || |||||
Sbjct: 976  cgttggttatggttcacaagatggcaaggactactggatcgtcaagaattcatgggg 1032



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   aagagcttgttgactgtgacactt 24
           |||||||||| |||||||||||||
Sbjct: 621 aagagcttgtcgactgtgacactt 644

---

>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete
             sequence
          Length = 101125

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 324   cttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
             |||||||||||||| |  ||||| |||||||| || || |||||||| |||||||||
Sbjct: 58940 cttgaccatggtgtggttgccgtcggttatggcactgacaatggcaaagactactgg 58884

---

>dbj|D90407.1|RICOZB Oryza sativa (japonica cultivar-group) mRNA for oryzain beta,
           complete cds
          Length = 1675

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 324 cttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
           |||||||||||||| |  ||||| |||||||| || || |||||||| |||||||||
Sbjct: 914 cttgaccatggtgtggttgccgtcggttatggcactgacaatggcaaagactactgg 970

---

>gb|AF050756.1|AF050756 Ricinus communis cysteine endopeptidase precursor (CysEP) mRNA,
           complete cds
          Length = 1270

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 30  aaccagggatgcaatggaggtctgatggactatgcatttgagttcatca 78
           ||||| ||||| || ||||| |||||||| ||||||||||| |||||||
Sbjct: 596 aaccaaggatgtaacggagggctgatggattatgcatttgaattcatca 644

---

>emb|AJ877019.1| Lubomirskia baicalensis catl-g gene for cathepsin L, exons 1-8
          Length = 2149

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 33   cagggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtggt 92
            ||||| ||||||||||||||||||||| |||| ||  ||| | |||| || || ||||||
Sbjct: 1202 cagggttgcaatggaggtctgatggacaatgctttccagtacgtcatcaagaacggtggt 1261

                 
Query: 93   attga 97
            |||||
Sbjct: 1262 attga 1266

---

>emb|AJ872184.1| Lubomirskia baicalensis mRNA for cathepsin L (catl2 gene)
          Length = 1228

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 33  cagggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtggt 92
           ||||| ||||||||||||||||||||| |||| ||  ||| | |||| || || ||||||
Sbjct: 586 cagggttgcaatggaggtctgatggacaatgctttccagtacgtcatcaagaacggtggt 645

                
Query: 93  attga 97
           |||||
Sbjct: 646 attga 650

---

>ref|NM_112826.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type
           peptidase AT3G19390 mRNA, complete cds
          Length = 1577

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 246 agtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttcacg 305
           |||||||| || || ||||||||||| || |||||||| |||| ||| ||| | || || 
Sbjct: 819 agtgttgccattgaagctggtggcagagctttccagctttacacatctggtgtgtttaca 878

                                           
Query: 306 ggaacctgtggaacagcacttgaccatggtgt 337
           ||||| ||||||||| |  | |||||||||||
Sbjct: 879 ggaacatgtggaacatctttggaccatggtgt 910



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 44  tggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattga 97
           ||||||||| ||||| ||||| ||| ||||||| ||| | || |||||||||||
Sbjct: 614 tggaggtcttatggattatgcttttaagttcattattgaaaacggtggtattga 667

---

>gb|AY504967.1| Iris hollandica putative cysteine protease 2 (CYS2) mRNA, complete
           cds
          Length = 1282

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 36  ggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtgg 91
           |||||||| || || || ||||||||||| |||||||||||||  | |||||||||
Sbjct: 568 ggatgcaacggtggccttatggactatgcctttgagttcatcaagagcaatggtgg 623

---

>emb|CR726964.2|CNS0GNVE Tetraodon nigroviridis full-length cDNA
          Length = 1464

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 411 ggagaggatggttacatccggatggagcgtaa 442
           |||||||| |||||||||||||||| ||||||
Sbjct: 942 ggagaggacggttacatccggatggcgcgtaa 973

---

>gb|AC131026.11| Medicago truncatula clone mth2-6e18, complete sequence
          Length = 114815

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 12   gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatt 67
            |||||||||||  | |||||| | || |||||||| ||||| ||||||||||||||
Sbjct: 9391 gactgtgacacaacttacaacaatggttgcaatgggggtctaatggactatgcatt 9446

---

>gb|DQ459304.1| Aedes aegypti cathepsin L (CAT-L2) mRNA, complete cds
          Length = 1163

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 69/84 (82%)
 Strand = Plus / Plus

                                                                       
Query: 345 gttggttatggtacagagaatggcaaggactactggctcgtcaggaactcctggggtagc 404
           |||||||| ||||| || |||||||  ||||||||||  || | |||||||||||||| |
Sbjct: 871 gttggttacggtacggaaaatggcactgactactggcaggtgaagaactcctggggtacc 930

                                   
Query: 405 gtctggggagaggatggttacatc 428
             |||||| ||| | |||||||||
Sbjct: 931 acctggggtgagaagggttacatc 954

---

>emb|Z34895.1|VSCYSPROA V.sativa L. (PROT A) mRNA for cysteine proteinase
          Length = 1284

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 39  tgcaatggaggtctgatggactatgcatttgagttcatca 78
           |||||||| || |||||||| ||||| |||||||||||||
Sbjct: 589 tgcaatggggggctgatggaatatgcgtttgagttcatca 628

---

>gb|AY093350.1| Arabidopsis thaliana cysteine proteinase (At3g19400) mRNA, complete
           cds
          Length = 1414

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 246 agtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttcacg 305
           |||||||| || || ||||||||||| || |||||||| |||| ||| ||| | || || 
Sbjct: 784 agtgttgccattgaagctggtggcagagctttccagctttacacatctggtgtgtttaca 843

                                           
Query: 306 ggaacctgtggaacagcacttgaccatggtgt 337
           ||||| ||||||||| |  | |||||||||||
Sbjct: 844 ggaacatgtggaacatctttggaccatggtgt 875



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 44  tggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattga 97
           ||||||||| ||||| ||||| ||| ||||||| ||| | || |||||||||||
Sbjct: 579 tggaggtcttatggattatgcttttaagttcattattgaaaacggtggtattga 632

---

>gb|AY062725.1| Arabidopsis thaliana cysteine proteinase (At3g19400; MLD14.12)
           mRNA, complete cds
          Length = 1575

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 246 agtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttcacg 305
           |||||||| || || ||||||||||| || |||||||| |||| ||| ||| | || || 
Sbjct: 819 agtgttgccattgaagctggtggcagagctttccagctttacacatctggtgtgtttaca 878

                                           
Query: 306 ggaacctgtggaacagcacttgaccatggtgt 337
           ||||| ||||||||| |  | |||||||||||
Sbjct: 879 ggaacatgtggaacatctttggaccatggtgt 910



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 44  tggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattga 97
           ||||||||| ||||| ||||| ||| ||||||| ||| | || |||||||||||
Sbjct: 614 tggaggtcttatggattatgcttttaagttcattattgaaaacggtggtattga 667

---

>emb|BX823701.1|CNS0A4SS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS68ZG08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1525

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 246 agtgttgcgatcgaggctggtggcagggcattccagctctacaaatcgggtatcttcacg 305
           |||||||| || || ||||||||||| || |||||||| |||| ||| ||| | || || 
Sbjct: 801 agtgttgccattgaagctggtggcagagctttccagctttacacatctggtgtgtttaca 860

                                           
Query: 306 ggaacctgtggaacagcacttgaccatggtgt 337
           ||||| ||||||||| |  | |||||||||||
Sbjct: 861 ggaacatgtggaacatctttggaccatggtgt 892



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 44  tggaggtctgatggactatgcatttgagttcatcattaacaatggtggtattga 97
           ||||||||| ||||| ||||| ||| ||||||| ||| | || |||||||||||
Sbjct: 596 tggaggtcttatggattatgcttttaagttcattattgaaaacggtggtattga 649

---

>dbj|AK110539.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B01, full
           insert sequence
          Length = 2375

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 165 gttgttaccattgatgggtacgaggatgtgcc 196
           ||||| ||||||||||| ||||||||||||||
Sbjct: 775 gttgtgaccattgatggctacgaggatgtgcc 806

---

>emb|X91643.1|EDCP4 E.dispar RNA encoding for cysteine proteinase (957 bp)
          Length = 957

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 328 accatggtgtcgccgccgttggttatggtac 358
           |||||||||||||||| ||||| ||||||||
Sbjct: 738 accatggtgtcgccgctgttggatatggtac 768

---

>dbj|AB109189.1| Helianthus annuus scp4 mRNA for cysteine protease-4, complete cds
          Length = 1271

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 39  tgcaatggaggtctgatggactatgcatttg 69
           |||||||||||||| ||||| ||||||||||
Sbjct: 617 tgcaatggaggtctcatggattatgcatttg 647

---

>dbj|AB091070.1| Zinnia elegans ZCP4 mRNA for cysteine proteinase, complete cds
          Length = 1224

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 39  tgcaatggaggtctgatggactatgcatttg 69
           |||||||||||||| ||||| ||||||||||
Sbjct: 597 tgcaatggaggtctcatggattatgcatttg 627

---

>gb|U19267.1|ZEU19267 Zinnia elegans cysteine proteinase mRNA, complete cds
          Length = 1230

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 39  tgcaatggaggtctgatggactatgcatttg 69
           |||||||||||||| ||||| ||||||||||
Sbjct: 603 tgcaatggaggtctcatggattatgcatttg 633

---

>gb|AY192360.1| Trifolium repens cysteine protease 14 gene, complete cds
          Length = 4410

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 39   tgcaatggaggtctgatggactatgcattt 68
            |||||||| ||||| |||||||||||||||
Sbjct: 2056 tgcaatgggggtctaatggactatgcattt 2085

---

>emb|CR659308.2|CNS0F7OY Tetraodon nigroviridis full-length cDNA
          Length = 876

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 411 ggagaggatggttacatccggatggagcgtaaca 444
           |||||||| |||||||||||| ||| ||||||||
Sbjct: 348 ggagaggacggttacatccgggtggcgcgtaaca 381

---

>emb|Z99173.1|NTCYSTPRO Nicotiana tabacum mRNA for cysteine proteinase precursor
          Length = 1218

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 54  atggactatgcatttgagttcatcat 79
           ||||||||||| ||||||||||||||
Sbjct: 681 atggactatgcctttgagttcatcat 706

---

>emb|Z69344.1|HCCYSPDM3 Haemonchus contortus mRNa for cysteine proteinase (HMCP3)
          Length = 1086

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 402 agcgtctggggagaggatggttacatccggatgg 435
           |||| ||||||||||||||||||| |||| ||||
Sbjct: 941 agcgactggggagaggatggttacttccgaatgg 974

---

>gb|AF462309.1| Acanthamoeba healyi cysteine proteinase (CP1) mRNA, complete cds
          Length = 993

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 36  ggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtggtatt 95
           |||||||| || |||||||||||||| || || |||| ||| || |||||  ||||||| 
Sbjct: 529 ggatgcaacggtggtctgatggactacgcgttcgagtacattatcaacaaccgtggtatc 588

                     
Query: 96  gactctgagg 105
           ||| ||||||
Sbjct: 589 gacactgagg 598

---

>gb|AY017413.1| Nicotiana tabacum CPR1-like cysteine proteinase gene, complete cds
          Length = 1976

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 54   atggactatgcatttgagttcatcat 79
            ||||||||||| ||||||||||||||
Sbjct: 1281 atggactatgcctttgagttcatcat 1306

---

>dbj|AB098628.1| Daucus carota DcCysP5 mRNA for cysteine protease, complete cds
          Length = 1928

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 54  atggactatgcatttgagttcatcattaacaatggtggtattgactctga 103
           ||||| ||||| ||| | |||||||| || |||||||||||||| |||||
Sbjct: 790 atggattatgcctttaacttcatcatcaaaaatggtggtattgattctga 839



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 54  atggactatgcatttgagttcatcattaacaatggtggtattgactctga 103
           ||||| ||||| ||| | |||||||| || |||||||||||||| |||||
Sbjct: 176 atggattatgcctttaacttcatcatcaaaaatggtggtattgattctga 127

---

>dbj|AK113507.1| Ciona intestinalis cDNA, clone:ciad065i07, full insert sequence
          Length = 1610

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 345  gttggttatggtacagagaatggcaaggactactggct 382
            ||||||||||| ||||| ||||| || |||||||||||
Sbjct: 1026 gttggttatggaacagaaaatggaaaagactactggct 1063

---

>ref|NM_117203.3| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type
           peptidase AT4G11320 mRNA, complete cds
          Length = 1430

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  tgagttcatcattaacaatggtggt 92
           |||||||||||| ||||||||||||
Sbjct: 727 tgagttcatcatgaacaatggtggt 751

---

>ref|NM_119701.2| Arabidopsis thaliana XCP1 (XYLEM CYSTEINE PEPTIDASE 1);
           cysteine-type endopeptidase/ cysteine-type peptidase
           AT4G35350 (XCP1) transcript variant AT4G35350.1 mRNA,
           complete cds
          Length = 1244

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 39  tgcaatggaggtctgatggactatgcatt 67
           |||||||||||||| |||||||| |||||
Sbjct: 645 tgcaatggaggtctcatggactacgcatt 673

---

>ref|NM_202958.1| Arabidopsis thaliana XCP1 (XYLEM CYSTEINE PEPTIDASE 1);
           cysteine-type endopeptidase/ cysteine-type peptidase
           AT4G35350 (XCP1) transcript variant AT4G35350.2 mRNA,
           complete cds
          Length = 1340

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 39  tgcaatggaggtctgatggactatgcatt 67
           |||||||||||||| |||||||| |||||
Sbjct: 645 tgcaatggaggtctcatggactacgcatt 673

---

>ref|NM_101938.2| Arabidopsis thaliana XCP2 (XYLEM CYSTEINE PEPTIDASE 2);
           cysteine-type peptidase/ peptidase AT1G20850 (XCP2)
           mRNA, complete cds
          Length = 1285

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 12  gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgag 71
           |||||||||||  | |||||| | || ||||| || ||||| ||||||||||| ||||||
Sbjct: 598 gactgtgacacgacctacaacaatggctgcaacggtggtctcatggactatgcctttgag 657

            
Query: 72  t 72
           |
Sbjct: 658 t 658

---

>gb|AY662992.1| Petunia x hybrida cysteine proteinase (CP6) mRNA, partial cds
          Length = 830

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 30  aaccagggatgcaatggaggtctgatggactatgcatttgagttcatca 78
           ||||| ||||||||||||||  ||||||| |  |||||||| |||||||
Sbjct: 61  aaccaaggatgcaatggagggttgatggatttggcatttgacttcatca 109

---

>gb|AY192361.1| Trifolium repens cysteine protease 14 mRNA, complete cds
          Length = 1217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 39  tgcaatggaggtctgatggactatgcatt 67
           |||||||| ||||| ||||||||||||||
Sbjct: 586 tgcaatgggggtctaatggactatgcatt 614

---

>gb|AY333290.1| Branchiostoma lanceolatum isolate Brla-alpha929 cathepsin mRNA,
           complete cds
          Length = 1195

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 368 caaggactactggctcgtcaggaac 392
           |||||||||||||||||||| ||||
Sbjct: 865 caaggactactggctcgtcaagaac 889

---

>gb|AY829805.1| Lonomia obliqua cysteine peptidase 1 cathepsin-L-like mRNA, partial
           cds
          Length = 198

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 372 gactactggctcgtcaggaactcctgggg 400
           |||||||||||||| | ||||||||||||
Sbjct: 76  gactactggctcgtgaagaactcctgggg 104

---

>gb|AC148981.7| Mus musculus BAC clone RP23-201L15 from chromosome 7, complete sequence
          Length = 223522

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 216    ctgcaaaaggcagttgcaaaccagc 240
              ||||||||||||| |||||||||||
Sbjct: 160605 ctgcaaaaggcagatgcaaaccagc 160581

---

>emb|X80990.1|NNCATLS N.norvegicus mRNA for cathepsin L
          Length = 1093

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 372 gactactggctcgtcaggaactcctggggtagcgtctgggg 412
           ||||||||||| |||| |||||| ||||| |||| ||||||
Sbjct: 821 gactactggcttgtcaagaactcttggggcagcggctgggg 861

---

>gb|AY051062.1| Arabidopsis thaliana putative cysteine proteinase (At4g11320) mRNA,
           complete cds
          Length = 1147

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  tgagttcatcattaacaatggtggt 92
           |||||||||||| ||||||||||||
Sbjct: 645 tgagttcatcatgaacaatggtggt 669

---

>gb|AY035055.1| Arabidopsis thaliana putative cysteine proteinase (At4g11320) mRNA,
           complete cds
          Length = 1410

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  tgagttcatcattaacaatggtggt 92
           |||||||||||| ||||||||||||
Sbjct: 727 tgagttcatcatgaacaatggtggt 751

---

>emb|AJ004958.1|PSA004958 Pisum sativum mRNA for TPE4A thiol-protease
          Length = 1270

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 36  ggatgcaatggaggtctgatggactatgcatttgagttcat 76
           ||||||||||| ||  | ||||| |||||||||||||||||
Sbjct: 573 ggatgcaatggtggattaatggaatatgcatttgagttcat 613

---

>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 39    tgcaatggaggtctgatggactatgcatt 67
             |||||||||||||| |||||||| |||||
Sbjct: 75836 tgcaatggaggtctcatggactacgcatt 75864

---

>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31
          Length = 198301

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 68     tgagttcatcattaacaatggtggt 92
              |||||||||||| ||||||||||||
Sbjct: 132357 tgagttcatcatgaacaatggtggt 132381

---

>emb|AL096882.2|ATF8L21 Arabidopsis thaliana DNA chromosome 4, BAC clone F8L21 (ESSA project)
          Length = 98948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 68    tgagttcatcattaacaatggtggt 92
             |||||||||||| ||||||||||||
Sbjct: 59351 tgagttcatcatgaacaatggtggt 59375

---

>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone  F23E12 (ESSA project)
          Length = 86710

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 39    tgcaatggaggtctgatggactatgcatt 67
             |||||||||||||| |||||||| |||||
Sbjct: 27515 tgcaatggaggtctcatggactacgcatt 27487

---

>gb|AC096543.2| Homo sapiens chromosome 1 clone RP11-335E6, complete sequence
          Length = 162837

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 191   tgtgcctgtgaacagtgagaa 211
             |||||||||||||||||||||
Sbjct: 22554 tgtgcctgtgaacagtgagaa 22574

---

>emb|BX827844.1|CNS0A31A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH26ZG11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1346

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  tgagttcatcattaacaatggtggt 92
           |||||||||||| ||||||||||||
Sbjct: 710 tgagttcatcatgaacaatggtggt 734

---

>emb|BX827227.1|CNS0A2UJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS23ZB03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1361

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  tgagttcatcattaacaatggtggt 92
           |||||||||||| ||||||||||||
Sbjct: 707 tgagttcatcatgaacaatggtggt 731

---

>emb|BX828945.1|CNS0A2LF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL53ZB08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1195

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 39  tgcaatggaggtctgatggactatgcatt 67
           |||||||||||||| |||||||| |||||
Sbjct: 632 tgcaatggaggtctcatggactacgcatt 660

---

>dbj|AB057372.1| Daucus carota CSCP gene for cysteine proteinase, partial cds
          Length = 2109

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 30   aaccagggatgcaatggaggtctgatggactatgcatttgagttcatca 78
            |||||||| ||||||||||| || |||||  ||||| | ||||||||||
Sbjct: 2041 aaccagggttgcaatggaggactaatggagaatgcactggagttcatca 2089

---

>gb|BT005179.1| Arabidopsis thaliana clone U50467 unknown protein (At4g35350) mRNA,
           complete cds
          Length = 1099

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 39  tgcaatggaggtctgatggactatgcatt 67
           |||||||||||||| |||||||| |||||
Sbjct: 598 tgcaatggaggtctcatggactacgcatt 626

---

>gb|BT004822.1| Arabidopsis thaliana At1g20850 gene, complete cds
          Length = 1071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 12  gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgag 71
           |||||||||||  | |||||| | || ||||| || ||||| ||||||||||| ||||||
Sbjct: 574 gactgtgacacgacctacaacaatggctgcaacggtggtctcatggactatgcctttgag 633

            
Query: 72  t 72
           |
Sbjct: 634 t 634

---

>gb|AY089180.1| Arabidopsis thaliana clone 6307 mRNA, complete sequence
          Length = 1370

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 68  tgagttcatcattaacaatggtggt 92
           |||||||||||| ||||||||||||
Sbjct: 724 tgagttcatcatgaacaatggtggt 748

---

>gb|AC010913.9| Homo sapiens BAC clone RP11-44N22 from 2, complete sequence
          Length = 209161

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 204    agtgagaagagtctgcaaaaggcag 228
              |||||||||| ||||||||||||||
Sbjct: 114892 agtgagaagattctgcaaaaggcag 114868

---

>gb|AF191028.1|AF191028 Arabidopsis thaliana papain-type cysteine endopeptidase XCP2 mRNA,
           complete cds
          Length = 1219

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 12  gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgag 71
           |||||||||||  | |||||| | || ||||| || ||||| ||||||||||| ||||||
Sbjct: 579 gactgtgacacgacctacaacaatggctgcaacggtggtctcatggactatgcctttgag 638

            
Query: 72  t 72
           |
Sbjct: 639 t 639

---

>gb|AF191027.1|AF191027 Arabidopsis thaliana papain-type cysteine endopeptidase XCP1 mRNA,
           complete cds
          Length = 1214

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 39  tgcaatggaggtctgatggactatgcatt 67
           |||||||||||||| |||||||| |||||
Sbjct: 598 tgcaatggaggtctcatggactacgcatt 626

---

>gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I,
              complete sequence
          Length = 143879

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                          
Query: 12     gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgag 71
              |||||||||||  | |||||| | || ||||| || ||||| ||||||||||| ||||||
Sbjct: 143324 gactgtgacacgacctacaacaatggctgcaacggtggtctcatggactatgcctttgag 143383

               
Query: 72     t 72
              |
Sbjct: 143384 t 143384

---

>dbj|AK117394.1| Arabidopsis thaliana At4g35350 mRNA for putative cysteine
           proteinase, complete cds, clone: RAFL16-98-B02
          Length = 1244

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 39  tgcaatggaggtctgatggactatgcatt 67
           |||||||||||||| |||||||| |||||
Sbjct: 645 tgcaatggaggtctcatggactacgcatt 673

---

>dbj|AP004984.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44N06, TM0438,
            complete sequence
          Length = 107764

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 39   tgcaatggaggtctgatggactatgcatt 67
            |||||||| ||||| ||||||||||||||
Sbjct: 5416 tgcaatgggggtctcatggactatgcatt 5444

---

>gb|AC007369.2| Arabidopsis thaliana chromosome I BAC F9H16 genomic sequence, complete
             sequence
          Length = 103192

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Minus

                                                                         
Query: 12    gactgtgacacttcatacaaccagggatgcaatggaggtctgatggactatgcatttgag 71
             |||||||||||  | |||||| | || ||||| || ||||| ||||||||||| ||||||
Sbjct: 95005 gactgtgacacgacctacaacaatggctgcaacggtggtctcatggactatgcctttgag 94946

              
Query: 72    t 72
             |
Sbjct: 94945 t 94945

---

>gb|AY700586.1| Zingiber officinale cysteine protease gp2b mRNA, complete cds
          Length = 1358

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                        
Query: 348  ggttatggtacagagaatggcaaggactactggctcgtcaggaactcctggggtagcgtc 407
            ||||||||||| || |||| |||||||||| ||  ||| | |||||| |||||||    |
Sbjct: 943  ggttatggtactgaaaatgacaaggactacaggaccgtgaagaactcgtggggtaagaac 1002

                                
Query: 408  tggggagaggatggttacat 427
            |||||||||  |||||||||
Sbjct: 1003 tggggagagtctggttacat 1022

---

>gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, complete sequence
          Length = 206094

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    agaatggcaaggactactgg 380
              ||||||||||||||||||||
Sbjct: 164594 agaatggcaaggactactgg 164613

---

>gb|AC115924.11| Mus musculus chromosome 15, clone RP24-511O11, complete sequence
          Length = 166860

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    agaatggcaaggactactgg 380
              ||||||||||||||||||||
Sbjct: 162958 agaatggcaaggactactgg 162939

---

>gb|AC010176.12| Homo sapiens 12 BAC RP11-711K1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 202103

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tgacacttcatacaaccagg 36
             ||||||||||||||||||||
Sbjct: 37563 tgacacttcatacaaccagg 37582

---

>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 64      catttgagttcatcattaacaatg 87
               ||||||||||||||||| ||||||
Sbjct: 1494702 catttgagttcatcattgacaatg 1494679

---

>emb|AL022724.2|HS413H6 Human DNA sequence from clone RP3-413H6 on chromosome 6p22.3-24.3
             Contains the gene for a novel protein similar to hamster
             androgen-dependent expressed protein and a novel gene,
             complete sequence
          Length = 142599

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   gcctgtgaacagtgagaaga 213
             ||||||||||||||||||||
Sbjct: 47687 gcctgtgaacagtgagaaga 47706

---

>ref|XM_963527.1| PREDICTED: Tribolium castaneum similar to Succinate dehydrogenase
           [ubiquinone] flavoprotein subunit, mitochondrial
           precursor (Fp) (Flavoprotein subunit of complex II)
           (LOC657039), mRNA
          Length = 2253

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 148 acaagaaaaatgccaaggtt 167
           ||||||||||||||||||||
Sbjct: 226 acaagaaaaatgccaaggtt 245

---

>emb|Z99952.1|PVZ99952 Phaseolus vulgaris Moldavian encoding cysteine proteinase precursor
           (clone cp6a)
          Length = 1351

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 36  ggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtgg 91
           |||||||| || || || |||||||| |||||  ||||||||||| | ||||||||
Sbjct: 593 ggatgcaacggtgggctcatggactacgcattccagttcatcattcaaaatggtgg 648

---

>emb|X82011.2|CACPMRNA Cicer arietinum mRNA for cysteine proteinase
          Length = 1217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 150 aagaaaaatgccaaggttgttaccattgatgggtacgaggatgt 193
           |||||||||||||| || || | ||||||||| || ||||||||
Sbjct: 711 aagaaaaatgccaaagtagtgagcattgatggatatgaggatgt 754

---

>emb|X70375.1|CATHIPA C.arietinum mRNA for thiol protease
          Length = 333

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 150 aagaaaaatgccaaggttgttaccattgatgggtacgaggatgt 193
           |||||||||||||| || || | ||||||||| || ||||||||
Sbjct: 235 aagaaaaatgccaaagtagtgagcattgatggatatgaggatgt 278

---

>emb|AL596024.5| Zebrafish DNA sequence from clone BUSM1-199M19 in linkage group 7
             Contains two novel genes similar to STAT (signal
             transducer and activator of transcription, a novel gene
             and a CpG island, complete sequence
          Length = 51817

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   aaaaatgccaaggttgttac 172
             ||||||||||||||||||||
Sbjct: 40781 aaaaatgccaaggttgttac 40762

---

>emb|AJ583512.1| Diabrotica virgifera virgifera mRNA for cathepsin L-like
           proteinase, clone DvRS33
          Length = 1196

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 345 gttggttatggtacagagaatggcaaggactactggctcgtcaggaactcctgggg 400
           ||||| ||||| ||||| ||||| || ||||||||| || |||  |||||||||||
Sbjct: 906 gttggatatggcacagaaaatggaaaagactactggatcatcaaaaactcctgggg 961

---

>emb|AJ245924.1|STU245924 Solanum tuberosum mRNA for cysteine protease (cyp gene)
          Length = 1755

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 110/140 (78%)
 Strand = Plus / Plus

                                                                       
Query: 261 gctggtggcagggcattccagctctacaaatcgggtatcttcacgggaacctgtggaaca 320
           ||||||||||| |  || |||| ||||||||| |||||||| || ||||  ||||| || 
Sbjct: 823 gctggtggcagagacttacagcactacaaatctggtatctttactggaaaatgtggtact 882

                                                                       
Query: 321 gcacttgaccatggtgtcgccgccgttggttatggtacagagaatggcaaggactactgg 380
           ||| | || |||||||| |  || | ||| |||||| | |||||||||| ||| || |||
Sbjct: 883 gcagtggatcatggtgtagttgctgctggatatggttctgagaatggcatggattattgg 942

                               
Query: 381 ctcgtcaggaactcctgggg 400
            | || |||||||| |||||
Sbjct: 943 attgttaggaactcatgggg 962



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 gaaaaatgccaaggttgtta 171
           ||||||||||||||||||||
Sbjct: 714 gaaaaatgccaaggttgtta 733

---

>emb|AJ224766.1|PVA224766 Phaseolus vulgaris mRNA for cotyledon cysteine protease (PVCEP-1
           gene)
          Length = 1382

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 36  ggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtgg 91
           |||||||| || || || |||||||| |||||  ||||||||||| | ||||||||
Sbjct: 610 ggatgcaacggtggcctcatggactacgcattccagttcatcattcaaaatggtgg 665

---

>emb|AL954696.17| Zebrafish DNA sequence from clone CH211-234K4, complete sequence
          Length = 149858

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    atggaggtctgatggactat 62
             ||||||||||||||||||||
Sbjct: 55122 atggaggtctgatggactat 55141

---

>gb|AC109518.6| Homo sapiens BAC clone RP11-492P11 from 4, complete sequence
          Length = 172189

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    agaaaaatgccaaggttgtt 170
              ||||||||||||||||||||
Sbjct: 137949 agaaaaatgccaaggttgtt 137968

---

>gb|AF320565.1|AF320565 Rhodnius prolixus cathepsine L-like cysteine protease mRNA,
           complete cds
          Length = 1098

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 345 gttggttatggtacagagaatggcaaggactactggctcgtcaggaactcctgggg 400
           ||||||||||| || || |||||| | || |||||||| |||| |||||| |||||
Sbjct: 902 gttggttatggcactgaaaatggccaagattactggcttgtcaagaactcatgggg 957

---

>gb|AE009945.1|AE009945 Pyrobaculum aerophilum strain IM2 section 200 of 201 of the complete
            genome
          Length = 11102

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  cagggcattccagctctaca 288
            ||||||||||||||||||||
Sbjct: 3128 cagggcattccagctctaca 3109

---

>gb|AY277910.1| Branchiostoma belcheri tsingtaunese cathepsin L precursor, mRNA,
           complete cds
          Length = 1480

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 369 aaggactactggctcgtcaggaac 392
           ||||||||||||||||||| ||||
Sbjct: 929 aaggactactggctcgtcaagaac 952

---

>gb|AF157961.1|AF157961 Hypera postica cysteine proteinase mRNA, complete cds
          Length = 1058

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 345 gttggttatggtacagagaatggcaaggactactggctcgtcaggaactcctgggg 400
           |||||||| || || |||||||| || ||||||||| || | | ||||||||||||
Sbjct: 831 gttggttacggaaccgagaatggtaaagactactggatcattaagaactcctgggg 886

---

>dbj|AB098625.1| Daucus carota DcCysP2 mRNA for cysteine protease, complete cds
          Length = 1483

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 54  atggactatgcatttgagttcatc 77
           ||||||||||||||||| ||||||
Sbjct: 720 atggactatgcatttgatttcatc 743

---

>gb|AF181567.1|AF181567 Solanum chacoense cysteine protease CYP1 (CYP1) mRNA, partial cds
          Length = 630

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 150 aagaaaaatgccaaggttgt 169
           ||||||||||||||||||||
Sbjct: 97  aagaaaaatgccaaggttgt 116



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 54  atggactatgcatttgagttcatcattaacaatggtggtattgactctgaggaggactac 113
           ||||||||||| ||||| ||| |||| || || || || |||||| |||| || ||||||
Sbjct: 1   atggactatgcctttgaattcgtcatcaataacggaggaattgacactgaagaagactac 60

                   
Query: 114 ccctacaa 121
           || |||||
Sbjct: 61  ccttacaa 68

---

>gb|AC007189.6|AC007189 Homo sapiens, clone 19_A_8, complete sequence
          Length = 154589

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    cagtgagaagagtctgcaaa 222
              ||||||||||||||||||||
Sbjct: 112452 cagtgagaagagtctgcaaa 112471

---

>gb|U52970.1|PVU52970 Phaseolus vulgaris cysteine endopeptidase 1 (PvCEP-1) mRNA,
           complete cds
          Length = 1382

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 36  ggatgcaatggaggtctgatggactatgcatttgagttcatcattaacaatggtgg 91
           |||||||| || || || |||||||| |||||  ||||||||||| | ||||||||
Sbjct: 610 ggatgcaacggtggcctcatggactacgcattccagttcatcattcaaaatggtgg 665

---

>emb|AL935053.6| Zebrafish DNA sequence from clone CH211-162M14, complete sequence
          Length = 138341

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   aaaaatgccaaggttgttac 172
             ||||||||||||||||||||
Sbjct: 89102 aaaaatgccaaggttgttac 89121

---

>dbj|AB020491.1| Haemaphysalis longicornis mRNA for cathepsin L-like tick cysteine
           proteinase B, complete cds
          Length = 1137

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 366 ggcaaggactactggctcgt 385
           ||||||||||||||||||||
Sbjct: 914 ggcaaggactactggctcgt 933


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,768,212
Number of Sequences: 3902068
Number of extensions: 3768212
Number of successful extensions: 66020
Number of sequences better than 10.0: 173
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 65657
Number of HSP's gapped (non-prelim): 358
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---