ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet98c12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PER30_ARATH (Q9LSY7) Peroxidase 30 precursor (EC 1.11.1.7) (Atpe... 30 2.2
2PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atpe... 28 5.0

>PER30_ARATH (Q9LSY7) Peroxidase 30 precursor (EC 1.11.1.7) (Atperox P30)|
           (PRXR9) (ATP7a)
          Length = 329

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 151 EGQLSPNFHAATCPDLERIVEFH 219
           E QL  NF+A +CP+ E+I+  H
Sbjct: 26  EAQLQMNFYAKSCPNAEKIISDH 48



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>PER55_ARATH (Q96509) Peroxidase 55 precursor (EC 1.11.1.7) (Atperox P55)|
           (ATP20a)
          Length = 330

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = +1

Query: 157 QLSPNFHAATCPDLERIVE 213
           QLS N++A+TCP +E IV+
Sbjct: 31  QLSENYYASTCPSVELIVK 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,265,032
Number of Sequences: 219361
Number of extensions: 217801
Number of successful extensions: 500
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 80,573,946
effective HSP length: 48
effective length of database: 70,044,618
effective search space used: 1681070832
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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