>NQR1_ORYSA (Q941Z0) Putative NADPH:quinone oxidoreductase 1 (EC 1.6.5.2)|
          Length = 197

 Score =  107 bits (267), Expect = 8e-24
 Identities = 51/62 (82%), Positives = 58/62 (93%)
 Frame = +3

Query: 78  MEVAAAKPVLRVAAVCGSLRRASYNRGLLRAAAEVCEESVPGMRVEHVDISALPLLNTDL 257
           ME AAA+PV+RVAA+CGSLR+ASYN GLLRAAA VCEES+PG+RV+HVDIS LPLLNTDL
Sbjct: 1   MEAAAARPVIRVAAICGSLRKASYNGGLLRAAAGVCEESIPGLRVDHVDISGLPLLNTDL 60

Query: 258 ET 263
           ET
Sbjct: 61  ET 62

>NQR_SOLTU (Q8H9D2) NAD(P)H:quinone oxidoreductase (EC 1.6.5.2) (NAD(P)H:QR)|
          Length = 194

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 38/57 (66%), Positives = 49/57 (85%)
 Frame = +3

Query: 90  AAKPVLRVAAVCGSLRRASYNRGLLRAAAEVCEESVPGMRVEHVDISALPLLNTDLE 260
           AA+PV++VA +CGSLR+ SYNRGLL AA E+C++S+ GM +E+VDIS LP LNTDLE
Sbjct: 2   AAQPVIKVAGLCGSLRKGSYNRGLLNAAMEICKDSITGMEIEYVDISPLPFLNTDLE 58

>NQR2_ORYSA (Q941Y8) Putative NADPH:quinone oxidoreductase 2 (EC 1.6.5.2)|
          Length = 203

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 39/61 (63%), Positives = 48/61 (78%)
 Frame = +3

Query: 78  MEVAAAKPVLRVAAVCGSLRRASYNRGLLRAAAEVCEESVPGMRVEHVDISALPLLNTDL 257
           ME + +   LRVAA+ GSLRR S N GL+RAA E+CEES+PGM ++HVDI  LPLLNTD+
Sbjct: 1   MEGSTSPKALRVAAISGSLRRGSANTGLIRAAKEICEESIPGMVIDHVDIPDLPLLNTDM 60

Query: 258 E 260
           E
Sbjct: 61  E 61

>NQR_ARATH (Q9LK88) NADPH:quinone oxidoreductase (EC 1.6.5.2)|
          Length = 196

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 36/59 (61%), Positives = 51/59 (86%)
 Frame = +3

Query: 84  VAAAKPVLRVAAVCGSLRRASYNRGLLRAAAEVCEESVPGMRVEHVDISALPLLNTDLE 260
           V A KP++RVAA+ GSLR+ S++ GLLRAA ++ +ESVPG+++E++DIS LPL+NTDLE
Sbjct: 4   VTAIKPLIRVAALSGSLRKTSFHTGLLRAAIDLTKESVPGLQIEYIDISPLPLINTDLE 62

>MSUE_PSEPK (Q88J85) FMN reductase (EC 1.5.1.29)|
          Length = 186

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = +3

Query: 102 VLRVAAVCGSLRRASYNRGLLRAAAEVCEESVPGMRVEHVDISAL 236
           V+RV  V GSLR  S   GLL+A  E     +P + V  V I+ L
Sbjct: 5   VIRVVVVSGSLRAPSRTHGLLQALVERLPAVLPKLEVHWVRIAEL 49

>HCC1_PONPY (Q5R4V4) Nuclear protein Hcc-1|
          Length = 209

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +3

Query: 24  EAEPTHLPRRQERPGHQSMEVAAAKPVLRVAAVCGSLRRASYNRGLLRAAAEVCEESVPG 203
           E +P  LP ++E P  ++++VAA K V+++ +      R    +   R    V  ES   
Sbjct: 63  ETKPIELPVKEEEPPEKTVDVAAEKKVVKITSEIPQTER--MQKRAERFNVPVSLESKKA 120

Query: 204 MRVEHVDISALP 239
            R     IS++P
Sbjct: 121 ARAARFGISSVP 132

>HCC1_HUMAN (P82979) Nuclear protein Hcc-1 (Proliferation-associated|
           cytokine-inducible protein CIP29)
          Length = 209

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = +3

Query: 24  EAEPTHLPRRQERPGHQSMEVAAAKPVLRVAAVCGSLRRASYNRGLLRAAAEVCEESVPG 203
           E +P  LP ++E P  ++++VAA K V+++ +      R    +   R    V  ES   
Sbjct: 63  ETKPIELPVKEEEPPEKTVDVAAEKKVVKITSEIPQTER--MQKRAERFNVPVSLESKKA 120

Query: 204 MRVEHVDISALP 239
            R     IS++P
Sbjct: 121 ARAARFGISSVP 132

>SDCG1_MOUSE (Q8CCP0) Serologically defined colon cancer antigen 1|
          Length = 1064

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 15   GKPEAEPTHLPRRQERPGHQSMEVAAAKPVLRVAA 119
            GKP+ EP   P ++ R G + ++V    P L+V A
Sbjct: 904  GKPKDEPVKKPPQKPRGGQRVLDVVKEPPSLQVLA 938

>TRUB_SYMTH (Q67P83) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 299

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 81  EVAAAKP-VLRVAAVCGSLRRASYNRGLLRAAAEVCEESVPGMRVEHVD 224
           E+AA K  +L  AA  G + R + +    RAAA V     P +RVEH D
Sbjct: 223 ELAAGKARLLPPAAALGDMPRVTVSG---RAAARVLHGVAPAVRVEHPD 268

>PUR9_SYNEL (Q8DIN5) Bifunctional purine biosynthesis protein purH [Includes:|
           Phosphoribosylaminoimidazolecarboxamide
           formyltransferase (EC 2.1.2.3) (AICAR transformylase);
           IMP cyclohydrolase (EC 3.5.4.10) (Inosinicase) (IMP
           synthetase) (ATIC)]
          Length = 518

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 260 LEVGVEQRQRGDVHVLHAHPRNRLLAHLRRGAE 162
           L  G    QR   +V  AHPR    AHL +G E
Sbjct: 218 LRYGENPHQRASWYVCGAHPRGWAAAHLLQGKE 250

>SYFA_PHOPR (Q6LQ72) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 327

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +3

Query: 42  LPRRQERPGHQSMEVAAAKPVLRVAAVCGSLRRASYNRGLLRAAAEVCEESVPGMRVEH 218
           LP  + R   Q +  A       +AA   +L+RA     L   AAE  + S+PG R+E+
Sbjct: 48  LPPEERRTAGQEINKAKGAVQQAIAARKDALQRAELETKL---AAETIDVSLPGRRIEN 103


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.128    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,113,025
Number of Sequences: 219361
Number of extensions: 393627
Number of successful extensions: 1136
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)