ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet98c08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY921638.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR1) mRNA, complete cds Length = 1465 Score = 214 bits (108), Expect = 2e-52 Identities = 238/280 (85%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||| ||||||||||| ||| |||| ||| | ||| || ||||||||||||||||| || Sbjct: 140 acgccttacaagatggggcagttcgagctctctcaccgggtggtgctggcgccgctgacg 199 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 ||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 200 aggtgccgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcccagcgc 259 Query: 219 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 278 |||||| || ||| |||||||||| |||||||||||||| || | ||| |||||||| Sbjct: 260 gccaccaggggtggcctgctcatcgcggaggccacgggggtgtcggccaccgcgcagggg 319 Query: 279 tacaaggacac-ccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 337 ||| ||| || || || || |||||| |||||| |||||||||||||||||||||||| Sbjct: 320 tacccggagactcctggcatctggacgcaggagcaggtcgaggcgtggaagcccatcgtc 379 Query: 338 gccgccgtgcacgccaagggcgcgctcttcttctgccaga 377 | |||||| ||| ||||||||| ||||| ||||||||| Sbjct: 380 gacgccgtccaccgcaagggcgccatcttcgtctgccaga 419
>gb|AY108052.1| Zea mays PCO079165 mRNA sequence Length = 1489 Score = 214 bits (108), Expect = 2e-52 Identities = 238/280 (85%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||| ||||||||||| ||| |||| ||| | ||| || ||||||||||||||||| || Sbjct: 162 acgccttacaagatggggcagttcgagctctctcaccgggtggtgctggcgccgctgacg 221 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 ||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 222 aggtgccgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcccagcgc 281 Query: 219 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 278 |||||| || ||| |||||||||| |||||||||||||| || | ||| |||||||| Sbjct: 282 gccaccaggggtggcctgctcatcgcggaggccacgggggtgtcggccaccgcgcagggg 341 Query: 279 tacaaggacac-ccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 337 ||| ||| || || || || |||||| |||||| |||||||||||||||||||||||| Sbjct: 342 tacccggagactcctggcatctggacgcaggagcaggtcgaggcgtggaagcccatcgtc 401 Query: 338 gccgccgtgcacgccaagggcgcgctcttcttctgccaga 377 | |||||| ||| ||||||||| ||||| ||||||||| Sbjct: 402 gacgccgtccaccgcaagggcgccatcttcgtctgccaga 441
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds Length = 1833 Score = 202 bits (102), Expect = 6e-49 Identities = 211/246 (85%), Gaps = 1/246 (0%) Strand = Plus / Plus Query: 132 cacaggatggtgctggcgccgctggcgaggcagcgctcctacggcaacgtgccgcagccg 191 |||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||| Sbjct: 718 cacagggtggtgctggcgccgctgacgcggcagcgctcctacggcaacgtcccgcagccg 777 Query: 192 cacgccgccgtgtactacgcccagcgcgccaccgccggcggcttgctcatcgccgaggcc 251 |||| |||||| |||||||| |||||||||||| |||||| | |||||| | |||||| Sbjct: 778 cacggcgccgtctactacgcgcagcgcgccacccggggcggcctcctcatcactgaggcc 837 Query: 252 acgggggtctccgacacggcgcagggatacaaggacac-ccggggatatggacggcggag 310 ||||| |||||||||||||||||||| |||| ||||| ||||| | |||||| | || Sbjct: 838 acgggcgtctccgacacggcgcagggctacaccgacacgccgggagtgtggacgcccgac 897 Query: 311 cacgtcgaggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttc 370 || || | ||||||| ||||||||| | |||||| |||||||||||||| |||||||| Sbjct: 898 caggtggcggcgtggcggcccatcgtagacgccgtccacgccaagggcgccgtcttcttc 957 Query: 371 tgccag 376 |||||| Sbjct: 958 tgccag 963
>gb|AY921639.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR2) mRNA, complete cds Length = 1409 Score = 190 bits (96), Expect = 2e-45 Identities = 235/280 (83%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||| ||||||||||| ||| |||| ||| | ||| || ||||||||||||||||| || Sbjct: 125 acgccttacaagatggggcagttcgagctctctcaccgggtggtgctggcgccgctgacg 184 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 ||| |||||||||||||||||||||||||| |||||||||||||||||| | |||||| Sbjct: 185 aggtgccgctcctacggcaacgtgccgcagccacacgccgccgtgtactactcgcagcgc 244 Query: 219 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 278 |||||| || ||| |||||||||| |||||||||||||| || | ||| |||||||| Sbjct: 245 gccaccaggggtggcctgctcatcgcggaggccacgggggtgtcggccaccgcgcagggg 304 Query: 279 tacaaggacac-ccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 337 | | ||| | || || || |||||| |||||| |||||||||||||||||||||||| Sbjct: 305 ttcccggagtctcctggcatctggacgcaggagcaggtcgaggcgtggaagcccatcgtc 364 Query: 338 gccgccgtgcacgccaagggcgcgctcttcttctgccaga 377 | |||||| ||| ||||||||| ||||| ||||||||| Sbjct: 365 gacgccgtccaccgcaagggcgccatcttcgtctgccaga 404
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 167 bits (84), Expect = 3e-38 Identities = 181/211 (85%), Gaps = 3/211 (1%) Strand = Plus / Minus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 5896759 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 5896700 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| | | Sbjct: 5896699 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 5896640 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 5896639 acacccggcg-tctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 5896581 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 5896580 ccaccgcaagggcgccctcttcatctgccag 5896550 Score = 165 bits (83), Expect = 1e-37 Identities = 231/279 (82%), Gaps = 1/279 (0%) Strand = Plus / Minus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| | | |||| ||| ||||| | ||||||| |||||||| || Sbjct: 5907031 acgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacg 5906972 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || | |||||||||||||||||||||| ||||||||| | |||||||| | |||||| Sbjct: 5906971 cggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtactacacgcagcgc 5906912 Query: 219 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 278 |||||| ||||||| | ||| || | |||||||| || ||||||||||| |||||||| Sbjct: 5906911 gccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgacaccgcgcagggc 5906852 Query: 279 tacaaggaca-cccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 337 ||| ||||| ||| || || |||||| | |||| |||||||||||||||||||||||| Sbjct: 5906851 tacccggacacccccggcatctggacgcagcagcaggtcgaggcgtggaagcccatcgtc 5906792 Query: 338 gccgccgtgcacgccaagggcgcgctcttcttctgccag 376 | |||||| ||| ||||||||| |||||| |||||||| Sbjct: 5906791 gacgccgtccaccgcaagggcgccctcttcatctgccag 5906753 Score = 151 bits (76), Expect = 2e-33 Identities = 179/211 (84%), Gaps = 3/211 (1%) Strand = Plus / Minus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 5891089 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 5891030 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||| ||| |||||||| ||| | | Sbjct: 5891029 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 5890970 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 5890969 acacccggcg-tccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 5890911 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 5890910 ccaccgcaagggcgccctcttcatctgccag 5890880 Score = 125 bits (63), Expect = 1e-25 Identities = 132/155 (85%) Strand = Plus / Minus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| ||||| || || ||||| || ||||||| ||||||||| || Sbjct: 5925063 acgccgtacaagatggggcagctggagctgtcccaccgggtggtgctcgcgccgctgacg 5925004 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || |||||||||||| |||||||||||||||||||||| ||||||||| | |||||| Sbjct: 5925003 cggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtactactcgcagcgc 5924944 Query: 219 gccaccgccggcggcttgctcatcgccgaggccac 253 |||||| |||||| | |||||||| |||||||| Sbjct: 5924943 gccaccaacggcggactcctcatcgcggaggccac 5924909 Score = 107 bits (54), Expect = 3e-20 Identities = 223/278 (80%), Gaps = 1/278 (0%) Strand = Plus / Minus Query: 100 cgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcga 159 |||||||||||||||| | | |||| ||| ||||| | ||||||| ||||||||| | Sbjct: 5916643 cgccgtacaagatggggcggttcgagctctcccaccgcgtggtgctcgcgccgctgactc 5916584 Query: 160 ggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcg 219 || |||||||||| | ||||||| ||||||||||| || |||||||| | ||||||| Sbjct: 5916583 ggtgccgctcctacgaccacgtgccacagccgcacgcggcgctgtactactcgcagcgcg 5916524 Query: 220 ccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggat 279 ||||| |||||| | |||||| | |||||||| ||||| |||| ||| | | |||| | Sbjct: 5916523 ccaccaatggcggcctcctcatctcggaggccaccggggtgtccgccaccggggagggct 5916464 Query: 280 acaaggaca-cccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcg 338 || ||| | ||| || | |||||| | |||| ||| |||||||||| |||||||||| Sbjct: 5916463 acccggagatccccggcgtctggacgcggcagcaggtcaaggcgtggaaacccatcgtcg 5916404 Query: 339 ccgccgtgcacgccaagggcgcgctcttcttctgccag 376 |||||| ||| ||||||||||||||||||||||||| Sbjct: 5916403 acgccgtccaccgcaagggcgcgctcttcttctgccag 5916366 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| || Sbjct: 5930347 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 5930288 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 5930287 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 5930228 Query: 219 gccaccgccggcggcttgctcatcgccgaggccac 253 || ||| |||||| | |||||||| |||||||| Sbjct: 5930227 gcgaccaggggcggcctcctcatcgcggaggccac 5930193 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 315 tcgaggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttc 370 |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||| Sbjct: 5930130 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 5930075
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 167 bits (84), Expect = 3e-38 Identities = 181/211 (85%), Gaps = 3/211 (1%) Strand = Plus / Minus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 18411 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 18352 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| | | Sbjct: 18351 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 18292 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 18291 acacccggcg-tctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 18233 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 18232 ccaccgcaagggcgccctcttcatctgccag 18202 Score = 165 bits (83), Expect = 1e-37 Identities = 231/279 (82%), Gaps = 1/279 (0%) Strand = Plus / Minus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| | | |||| ||| ||||| | ||||||| |||||||| || Sbjct: 28683 acgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacg 28624 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || | |||||||||||||||||||||| ||||||||| | |||||||| | |||||| Sbjct: 28623 cggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtactacacgcagcgc 28564 Query: 219 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 278 |||||| ||||||| | ||| || | |||||||| || ||||||||||| |||||||| Sbjct: 28563 gccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgacaccgcgcagggc 28504 Query: 279 tacaaggaca-cccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 337 ||| ||||| ||| || || |||||| | |||| |||||||||||||||||||||||| Sbjct: 28503 tacccggacacccccggcatctggacgcagcagcaggtcgaggcgtggaagcccatcgtc 28444 Query: 338 gccgccgtgcacgccaagggcgcgctcttcttctgccag 376 | |||||| ||| ||||||||| |||||| |||||||| Sbjct: 28443 gacgccgtccaccgcaagggcgccctcttcatctgccag 28405 Score = 151 bits (76), Expect = 2e-33 Identities = 179/211 (84%), Gaps = 3/211 (1%) Strand = Plus / Minus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 12741 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 12682 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||| ||| |||||||| ||| | | Sbjct: 12681 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 12622 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 12621 acacccggcg-tccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 12563 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 12562 ccaccgcaagggcgccctcttcatctgccag 12532 Score = 125 bits (63), Expect = 1e-25 Identities = 132/155 (85%) Strand = Plus / Minus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| ||||| || || ||||| || ||||||| ||||||||| || Sbjct: 46715 acgccgtacaagatggggcagctggagctgtcccaccgggtggtgctcgcgccgctgacg 46656 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || |||||||||||| |||||||||||||||||||||| ||||||||| | |||||| Sbjct: 46655 cggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtactactcgcagcgc 46596 Query: 219 gccaccgccggcggcttgctcatcgccgaggccac 253 |||||| |||||| | |||||||| |||||||| Sbjct: 46595 gccaccaacggcggactcctcatcgcggaggccac 46561 Score = 107 bits (54), Expect = 3e-20 Identities = 223/278 (80%), Gaps = 1/278 (0%) Strand = Plus / Minus Query: 100 cgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcga 159 |||||||||||||||| | | |||| ||| ||||| | ||||||| ||||||||| | Sbjct: 38295 cgccgtacaagatggggcggttcgagctctcccaccgcgtggtgctcgcgccgctgactc 38236 Query: 160 ggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcg 219 || |||||||||| | ||||||| ||||||||||| || |||||||| | ||||||| Sbjct: 38235 ggtgccgctcctacgaccacgtgccacagccgcacgcggcgctgtactactcgcagcgcg 38176 Query: 220 ccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggat 279 ||||| |||||| | |||||| | |||||||| ||||| |||| ||| | | |||| | Sbjct: 38175 ccaccaatggcggcctcctcatctcggaggccaccggggtgtccgccaccggggagggct 38116 Query: 280 acaaggaca-cccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcg 338 || ||| | ||| || | |||||| | |||| ||| |||||||||| |||||||||| Sbjct: 38115 acccggagatccccggcgtctggacgcggcagcaggtcaaggcgtggaaacccatcgtcg 38056 Query: 339 ccgccgtgcacgccaagggcgcgctcttcttctgccag 376 |||||| ||| ||||||||||||||||||||||||| Sbjct: 38055 acgccgtccaccgcaagggcgcgctcttcttctgccag 38018 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| || Sbjct: 51999 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 51940 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 51939 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 51880 Query: 219 gccaccgccggcggcttgctcatcgccgaggccac 253 || ||| |||||| | |||||||| |||||||| Sbjct: 51879 gcgaccaggggcggcctcctcatcgcggaggccac 51845 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 315 tcgaggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttc 370 |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||| Sbjct: 51782 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 51727
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 167 bits (84), Expect = 3e-38 Identities = 181/211 (85%), Gaps = 3/211 (1%) Strand = Plus / Minus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 97534 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 97475 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| | | Sbjct: 97474 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 97415 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 97414 acacccggcg-tctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 97356 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 97355 ccaccgcaagggcgccctcttcatctgccag 97325 Score = 165 bits (83), Expect = 1e-37 Identities = 231/279 (82%), Gaps = 1/279 (0%) Strand = Plus / Minus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| | | |||| ||| ||||| | ||||||| |||||||| || Sbjct: 107806 acgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacg 107747 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || | |||||||||||||||||||||| ||||||||| | |||||||| | |||||| Sbjct: 107746 cggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtactacacgcagcgc 107687 Query: 219 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 278 |||||| ||||||| | ||| || | |||||||| || ||||||||||| |||||||| Sbjct: 107686 gccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgacaccgcgcagggc 107627 Query: 279 tacaaggaca-cccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 337 ||| ||||| ||| || || |||||| | |||| |||||||||||||||||||||||| Sbjct: 107626 tacccggacacccccggcatctggacgcagcagcaggtcgaggcgtggaagcccatcgtc 107567 Query: 338 gccgccgtgcacgccaagggcgcgctcttcttctgccag 376 | |||||| ||| ||||||||| |||||| |||||||| Sbjct: 107566 gacgccgtccaccgcaagggcgccctcttcatctgccag 107528 Score = 151 bits (76), Expect = 2e-33 Identities = 179/211 (84%), Gaps = 3/211 (1%) Strand = Plus / Minus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 91864 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 91805 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||| ||| |||||||| ||| | | Sbjct: 91804 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 91745 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 91744 acacccggcg-tccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 91686 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 91685 ccaccgcaagggcgccctcttcatctgccag 91655 Score = 125 bits (63), Expect = 1e-25 Identities = 132/155 (85%) Strand = Plus / Minus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| ||||| || || ||||| || ||||||| ||||||||| || Sbjct: 125838 acgccgtacaagatggggcagctggagctgtcccaccgggtggtgctcgcgccgctgacg 125779 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || |||||||||||| |||||||||||||||||||||| ||||||||| | |||||| Sbjct: 125778 cggtgccgctcctacggccacgtgccgcagccgcacgccgcggtgtactactcgcagcgc 125719 Query: 219 gccaccgccggcggcttgctcatcgccgaggccac 253 |||||| |||||| | |||||||| |||||||| Sbjct: 125718 gccaccaacggcggactcctcatcgcggaggccac 125684 Score = 107 bits (54), Expect = 3e-20 Identities = 223/278 (80%), Gaps = 1/278 (0%) Strand = Plus / Minus Query: 100 cgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcga 159 |||||||||||||||| | | |||| ||| ||||| | ||||||| ||||||||| | Sbjct: 117418 cgccgtacaagatggggcggttcgagctctcccaccgcgtggtgctcgcgccgctgactc 117359 Query: 160 ggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcg 219 || |||||||||| | ||||||| ||||||||||| || |||||||| | ||||||| Sbjct: 117358 ggtgccgctcctacgaccacgtgccacagccgcacgcggcgctgtactactcgcagcgcg 117299 Query: 220 ccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggat 279 ||||| |||||| | |||||| | |||||||| ||||| |||| ||| | | |||| | Sbjct: 117298 ccaccaatggcggcctcctcatctcggaggccaccggggtgtccgccaccggggagggct 117239 Query: 280 acaaggaca-cccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcg 338 || ||| | ||| || | |||||| | |||| ||| |||||||||| |||||||||| Sbjct: 117238 acccggagatccccggcgtctggacgcggcagcaggtcaaggcgtggaaacccatcgtcg 117179 Query: 339 ccgccgtgcacgccaagggcgcgctcttcttctgccag 376 |||||| ||| ||||||||||||||||||||||||| Sbjct: 117178 acgccgtccaccgcaagggcgcgctcttcttctgccag 117141 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Minus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| || Sbjct: 131122 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 131063 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 131062 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 131003 Query: 219 gccaccgccggcggcttgctcatcgccgaggccac 253 || ||| |||||| | |||||||| |||||||| Sbjct: 131002 gcgaccaggggcggcctcctcatcgcggaggccac 130968 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 315 tcgaggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttc 370 |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||| Sbjct: 130905 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 130850
>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full insert sequence Length = 1281 Score = 167 bits (84), Expect = 3e-38 Identities = 181/211 (85%), Gaps = 3/211 (1%) Strand = Plus / Plus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| | | Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 320 acacccggcg-tctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 378 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 379 ccaccgcaagggcgccctcttcatctgccag 409
>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full insert sequence Length = 1281 Score = 167 bits (84), Expect = 3e-38 Identities = 181/211 (85%), Gaps = 3/211 (1%) Strand = Plus / Plus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| | | Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 320 acacccggcg-tctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 378 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 379 ccaccgcaagggcgccctcttcatctgccag 409
>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full insert sequence Length = 1422 Score = 167 bits (84), Expect = 3e-38 Identities = 181/211 (85%), Gaps = 3/211 (1%) Strand = Plus / Plus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 195 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 254 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| | | Sbjct: 255 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 314 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 315 acacccggcg-tctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 373 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 374 ccaccgcaagggcgccctcttcatctgccag 404
>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full insert sequence Length = 1434 Score = 167 bits (84), Expect = 3e-38 Identities = 181/211 (85%), Gaps = 3/211 (1%) Strand = Plus / Plus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 200 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccaccagc 259 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||||||| |||||||| ||| | | Sbjct: 260 ggcggcctcctcatcacggaggccaccggcgtctccgacaccgcgcagggctacccggag 319 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | |||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 320 acacccggcg-tctggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 378 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 379 ccaccgcaagggcgccctcttcatctgccag 409
>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full insert sequence Length = 1311 Score = 165 bits (83), Expect = 1e-37 Identities = 231/279 (82%), Gaps = 1/279 (0%) Strand = Plus / Plus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| | | |||| ||| ||||| | ||||||| |||||||| || Sbjct: 134 acgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacg 193 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || | |||||||||||||||||||||| ||||||||| | |||||||| | |||||| Sbjct: 194 cggaaccgctcctacggcaacgtgccgcggccgcacgcggtgctgtactacacgcagcgc 253 Query: 219 gccaccgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggga 278 |||||| ||||||| | ||| || | |||||||| || ||||||||||| |||||||| Sbjct: 254 gccaccagcggcggcctcctcgtcacggaggccaccggcgtctccgacaccgcgcagggc 313 Query: 279 tacaaggaca-cccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtc 337 ||| ||||| ||| || || |||||| | |||| |||||||||||||||||||||||| Sbjct: 314 tacccggacacccccggcatctggacgcagcagcaggtcgaggcgtggaagcccatcgtc 373 Query: 338 gccgccgtgcacgccaagggcgcgctcttcttctgccag 376 | |||||| ||| ||||||||| |||||| |||||||| Sbjct: 374 gacgccgtccaccgcaagggcgccctcttcatctgccag 412
>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full insert sequence Length = 1517 Score = 151 bits (76), Expect = 2e-33 Identities = 179/211 (84%), Gaps = 3/211 (1%) Strand = Plus / Plus Query: 168 tcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccaccgcc 227 ||||||||||||||||||||||||||||| || |||||||| | |||||||||||| | Sbjct: 278 tcctacggcaacgtgccgcagccgcacgcggcgctgtactacacgcagcgcgccacccgc 337 Query: 228 ggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcagggatacaag--g 285 |||||| | |||||| | |||||||| || ||||||| ||| |||||||| ||| | | Sbjct: 338 ggcggcctcctcatcacggaggccaccggcgtctccgccaccgcgcagggctacccggag 397 Query: 286 acacccggggatatggacggcggagcacgtcgaggcgtggaagcccatcgtcgccgccgt 345 |||||||| | | ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 398 acacccggcg-tccggacgcgggagcacgtcgaggcgtggaagcccatcgtcgacgccgt 456 Query: 346 gcacgccaagggcgcgctcttcttctgccag 376 ||| ||||||||| |||||| |||||||| Sbjct: 457 ccaccgcaagggcgccctcttcatctgccag 487
>gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3) mRNA, complete cds Length = 1431 Score = 111 bits (56), Expect = 2e-21 Identities = 146/176 (82%) Strand = Plus / Plus Query: 102 ccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcgagg 161 |||||||||||||| ||||| || ||| ||||| | |||||||||||||| || || || Sbjct: 110 ccgtacaagatggggcagctggagctctcccaccgcgtggtgctggcgccgatgacgcgg 169 Query: 162 cagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgcc 221 ||| || ||| |||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 170 tgccgcgccatcggggacgtgccgcagccgcacgccgccgtgtactactcgcagcgcgcc 229 Query: 222 accgccggcggcttgctcatcgccgaggccacgggggtctccgacacggcgcaggg 277 | | |||||| |||||||| |||||| ||||||||| |||| ||| |||||||| Sbjct: 230 agcaggggcggcgtgctcatcaccgagggcacgggggtgtccgccaccgcgcaggg 285 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 319 ggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttctgccaga 377 |||||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||| Sbjct: 328 ggcgtggaagcccatcgtcgacgccgtccaccgcaagggtgcgctcttcttctgccaga 386
>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full insert sequence Length = 1295 Score = 111 bits (56), Expect = 2e-21 Identities = 147/176 (83%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 202 tgtactacgcccagcgcgccaccgccggcggcttgctcatcgccgaggccacgggggtct 261 |||||||| | |||||||||||| ||||||| | ||| || | |||||||| || |||| Sbjct: 220 tgtactacacgcagcgcgccaccagcggcggcctcctcgtcacggaggccaccggcgtct 279 Query: 262 ccgacacggcgcagggatacaaggacacccgggg-atatggacggcggagcacgtcgagg 320 ||||||| |||||||| ||| |||||||| || || |||||| | |||| ||||||| Sbjct: 280 ccgacaccgcgcagggctacccggacacccccggcatctggacgcagcagcaggtcgagg 339 Query: 321 cgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttctgccag 376 |||||||||||||||||| |||||| ||| ||||||||| |||||| |||||||| Sbjct: 340 cgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcatctgccag 395 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| | | |||| ||| ||||| | ||||||| |||||||| || Sbjct: 135 acgccgtacaagatggggcggttcgagctctcccaccgtgtggtgctcgcgccgctcacg 194 Query: 159 aggcagcgctcctacggcaacgtgc 183 || | ||||||||||||||||||| Sbjct: 195 cggaaccgctcctacggcaacgtgc 219
>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic acid reductase (opda gene) Length = 1343 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| || Sbjct: 91 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 150 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 151 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 210 Query: 219 gccaccgccggcggcttgctcatcgccgaggccac 253 || ||| |||||| | |||||||| |||||||| Sbjct: 211 gcgaccaggggcggcctcctcatcgcggaggccac 245 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 315 tcgaggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttc 370 |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||| Sbjct: 308 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 363
>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 gene for 12-oxo-phytodienoic acid reductase, complete cds Length = 2492 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| || Sbjct: 1105 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 1164 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 1165 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 1224 Query: 219 gccaccgccggcggcttgctcatcgccgaggccac 253 || ||| |||||| | |||||||| |||||||| Sbjct: 1225 gcgaccaggggcggcctcctcatcgcggaggccac 1259 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 315 tcgaggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttc 370 |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||| Sbjct: 1322 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 1377
>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full insert sequence Length = 1520 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| || Sbjct: 157 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 216 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 217 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 276 Query: 219 gccaccgccggcggcttgctcatcgccgaggccac 253 || ||| |||||| | |||||||| |||||||| Sbjct: 277 gcgaccaggggcggcctcctcatcgcggaggccac 311 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 315 tcgaggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttc 370 |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||| Sbjct: 374 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 429
>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase, complete cds Length = 1384 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 99 acgccgtacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcg 158 ||||||||||||||||| ||||| || ||| ||||| | ||||||| |||||||| || Sbjct: 129 acgccgtacaagatggggcagctggagctctcccaccgtgtggtgctcgcgccgctcacg 188 Query: 159 aggcagcgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgc 218 || |||||||||||||||||||||||||||||||| || ||||||||| | ||||| Sbjct: 189 cggtgccgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgg 248 Query: 219 gccaccgccggcggcttgctcatcgccgaggccac 253 || ||| |||||| | |||||||| |||||||| Sbjct: 249 gcgaccaggggcggcctcctcatcgcggaggccac 283 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 315 tcgaggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttc 370 |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||| Sbjct: 346 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 401
>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for oxo-phytodienoic acid reductase (opda2 gene) Length = 1248 Score = 81.8 bits (41), Expect = 1e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 165 cgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcgcgccacc 224 |||||||||||||||||||||||||||||||| || ||||||||| | ||||| || ||| Sbjct: 1 cgctcctacggcaacgtgccgcagccgcacgcggcggtgtactactcgcagcgggcgacc 60 Query: 225 gccggcggcttgctcatcgccgaggccac 253 |||||| | |||||||| |||||||| Sbjct: 61 aggggcggcctcctcatcgcggaggccac 89 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 315 tcgaggcgtggaagcccatcgtcgccgccgtgcacgccaagggcgcgctcttcttc 370 |||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||| Sbjct: 152 tcgaggcgtggaagcccatcgtcgacgccgtccaccgcaagggcgccctcttcttc 207
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 341 gccgtgcacgccaagggcgcgctcttcttctgcca 375 |||||||||||||||||||| |||||||||||||| Sbjct: 15176090 gccgtgcacgccaagggcgcactcttcttctgcca 15176056 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 343 cgtgcacgccaagggcgcgctcttcttctgccaga 377 |||||||||||||||||| ||||||||||||||| Sbjct: 15169717 cgtgcacgccaagggcgccgtcttcttctgccaga 15169683 Score = 44.1 bits (22), Expect = 0.32 Identities = 40/46 (86%) Strand = Plus / Minus Query: 92 tctcctcacgccgtacaagatgggccagctcgacctcgcccacagg 137 |||||| || || |||||||||||||||||| |||| || |||||| Sbjct: 15177586 tctcctgacaccctacaagatgggccagctcaacctggcacacagg 15177541 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gaagcccatcgtcgccgccg 344 |||||||||||||||||||| Sbjct: 22387419 gaagcccatcgtcgccgccg 22387400
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 341 gccgtgcacgccaagggcgcgctcttcttctgcca 375 |||||||||||||||||||| |||||||||||||| Sbjct: 148056 gccgtgcacgccaagggcgcactcttcttctgcca 148022 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 343 cgtgcacgccaagggcgcgctcttcttctgccaga 377 |||||||||||||||||| ||||||||||||||| Sbjct: 141683 cgtgcacgccaagggcgccgtcttcttctgccaga 141649 Score = 44.1 bits (22), Expect = 0.32 Identities = 40/46 (86%) Strand = Plus / Minus Query: 92 tctcctcacgccgtacaagatgggccagctcgacctcgcccacagg 137 |||||| || || |||||||||||||||||| |||| || |||||| Sbjct: 149552 tctcctgacaccctacaagatgggccagctcaacctggcacacagg 149507
>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0493G01 Length = 167587 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 341 gccgtgcacgccaagggcgcgctcttcttctgcca 375 |||||||||||||||||||| |||||||||||||| Sbjct: 29463 gccgtgcacgccaagggcgcactcttcttctgcca 29429 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 343 cgtgcacgccaagggcgcgctcttcttctgccaga 377 |||||||||||||||||| ||||||||||||||| Sbjct: 23090 cgtgcacgccaagggcgccgtcttcttctgccaga 23056 Score = 44.1 bits (22), Expect = 0.32 Identities = 40/46 (86%) Strand = Plus / Minus Query: 92 tctcctcacgccgtacaagatgggccagctcgacctcgcccacagg 137 |||||| || || |||||||||||||||||| |||| || |||||| Sbjct: 30959 tctcctgacaccctacaagatgggccagctcaacctggcacacagg 30914
>dbj|AK121554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G12, full insert sequence Length = 1613 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 341 gccgtgcacgccaagggcgcgctcttcttctgcca 375 |||||||||||||||||||| |||||||||||||| Sbjct: 574 gccgtgcacgccaagggcgcactcttcttctgcca 608 Score = 48.1 bits (24), Expect = 0.021 Identities = 42/48 (87%) Strand = Plus / Plus Query: 92 tctcctcacgccgtacaagatgggccagctcgacctcgcccacaggat 139 |||||| || || |||||||||||||||||| |||| || |||||||| Sbjct: 93 tctcctgacaccctacaagatgggccagctcaacctggcacacaggat 140
>emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete genome; segment 29/29 Length = 302007 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 203 gtactacgcccagcgcgccaccgccgg 229 ||||||||||||||||||||||||||| Sbjct: 45363 gtactacgcccagcgcgccaccgccgg 45389
>dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N02, full insert sequence Length = 2710 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 343 cgtgcacgccaagggcgcgctcttcttctgccaga 377 |||||||||||||||||| ||||||||||||||| Sbjct: 451 cgtgcacgccaagggcgccgtcttcttctgccaga 485 Score = 42.1 bits (21), Expect = 1.3 Identities = 90/113 (79%) Strand = Plus / Plus Query: 105 tacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcgaggcag 164 ||||||||||||||| | || ||||| |||||| | || || |||||| || || || Sbjct: 229 tacaagatgggccagtttgatctcgctcacagggtcgttcttgcgccgttgacgcggtgc 288 Query: 165 cgctcctacggcaacgtgccgcagccgcacgccgccgtgtactacgcccagcg 217 || |||||||| |||||||| ||||||| ||||| ||||||||| ||||| Sbjct: 289 cggtcctacgggaacgtgcccgggccgcacaacgccgcgtactacgcgcagcg 341
>gb|AE011767.1| Xanthomonas axonopodis pv. citri str. 306, section 145 of 469 of the complete genome Length = 11162 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 198 gccgtgtactacgcccagcgcgccaccgccggc 230 |||| |||||||| ||||||||||||||||||| Sbjct: 9266 gccgagtactacggccagcgcgccaccgccggc 9234
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 198 gccgtgtactacgcccagcgcgccaccgccggc 230 |||| |||||||||||||||||||| ||||||| Sbjct: 1949355 gccgagtactacgcccagcgcgccagcgccggc 1949387 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 gtactacgcccagcgcgccaccgccggc 230 ||||||| |||||||||||| ||||||| Sbjct: 411227 gtactacacccagcgcgccagcgccggc 411200
>gb|AE012230.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 138 of 460 of the complete genome Length = 10813 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 203 gtactacgcccagcgcgccaccgccggc 230 ||||||||||||||||||||| |||||| Sbjct: 10508 gtactacgcccagcgcgccactgccggc 10481
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 203 gtactacgcccagcgcgccaccgccggc 230 ||||||||||||||||||||| |||||| Sbjct: 3509354 gtactacgcccagcgcgccactgccggc 3509381
>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds Length = 1594 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 203 gtactacgcccagcgcgccaccgccggcggcttgctcatcgccgagg 249 ||||||||| ||||| |||| | |||||||||||||||| |||||| Sbjct: 404 gtactacgcgcagcggtccacggacggcggcttgctcatctccgagg 450 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 cctcgcccacaggatggtgctggcgccg 152 |||||||||| || |||||||||||||| Sbjct: 326 cctcgcccaccgggtggtgctggcgccg 353
>dbj|AK094176.1| Homo sapiens cDNA FLJ36857 fis, clone ASTRO2014961 Length = 2096 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 7 catcagtcttcttcttcctcctc 29 ||||||||||||||||||||||| Sbjct: 1767 catcagtcttcttcttcctcctc 1745
>gb|AC016725.5| Homo sapiens BAC clone RP11-341H1 from 2, complete sequence Length = 164180 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Plus Query: 7 catcagtcttcttcttcctcctc 29 ||||||||||||||||||||||| Sbjct: 26981 catcagtcttcttcttcctcctc 27003
>gb|AY921643.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR6) mRNA, complete cds Length = 1267 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 226 ccggcggcttgctcatcgccgaggcc 251 |||||||||| ||||||||||||||| Sbjct: 196 ccggcggcttcctcatcgccgaggcc 221 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 105 tacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcgagg 161 |||||||||||| | || |||| || |||||| | ||||||||||||||| ||||| Sbjct: 72 tacaagatgggcgatttcaacctggcacacagggttgtgctggcgccgctgacgagg 128
>gb|BT018936.1| Zea mays clone Contig79.F mRNA sequence Length = 1257 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Plus Query: 240 atcgccgaggccacgggggtctccgacacggcgcagggatacaaggacac 289 ||||| |||||||||||||| || ||||| || || || ||||||||||| Sbjct: 178 atcgctgaggccacgggggtttcagacactgctcaagggtacaaggacac 227
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Minus Query: 205 actacgcccagcgcgccaccgccggc 230 ||||| |||||||||||||||||||| Sbjct: 1752748 actacacccagcgcgccaccgccggc 1752723
>emb|CR847978.17| Zebrafish DNA sequence from clone CH211-209D14 in linkage group 3, complete sequence Length = 194437 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 12 gtcttcttcttcctcctctgcc 33 |||||||||||||||||||||| Sbjct: 86965 gtcttcttcttcctcctctgcc 86986
>gb|AC154756.2| Mus musculus BAC clone RP23-114J15 from 13, complete sequence Length = 189515 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 51 aaaaacaacttattcagctcttcagcaatg 80 |||||||| |||||||||||||||| |||| Sbjct: 167587 aaaaacaagttattcagctcttcagaaatg 167558
>gb|AY106849.1| Zea mays PCO134627 mRNA sequence Length = 1274 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 226 ccggcggcttgctcatcgccgaggcc 251 |||||||||| ||||||||||||||| Sbjct: 203 ccggcggcttcctcatcgccgaggcc 228 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 105 tacaagatgggccagctcgacctcgcccacaggatggtgctggcgccgctggcgagg 161 |||||||||||| | || |||| || |||||| | ||||||||||||||| ||||| Sbjct: 79 tacaagatgggcgatttcaacctggcacacagggttgtgctggcgccgctgacgagg 135
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 cgccggcggcttgctcatcgc 244 ||||||||||||||||||||| Sbjct: 507927 cgccggcggcttgctcatcgc 507907
>gb|U56959.1| Caenorhabditis elegans cosmid T21F4, complete sequence Length = 17758 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 gctcaagaaaaacaacttatt 64 ||||||||||||||||||||| Sbjct: 2177 gctcaagaaaaacaacttatt 2157
>emb|CR712439.2|CNS0GCO3 Tetraodon nigroviridis full-length cDNA Length = 456 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 ttcttcttcctcctctgccattgat 39 |||||||||||||||| |||||||| Sbjct: 205 ttcttcttcctcctcttccattgat 181
>emb|CR655219.2|CNS0F4JD Tetraodon nigroviridis full-length cDNA Length = 1084 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 ttcttcttcctcctctgccattgat 39 |||||||||||||||| |||||||| Sbjct: 879 ttcttcttcctcctcttccattgat 855
>emb|CR643609.2|CNS0EVKV Tetraodon nigroviridis full-length cDNA Length = 1065 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 15 ttcttcttcctcctctgccattgat 39 |||||||||||||||| |||||||| Sbjct: 871 ttcttcttcctcctcttccattgat 847
>gb|AC102510.5| Mus musculus chromosome 5, clone RP24-346C14, complete sequence Length = 180051 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgcc 33 ||||||||||||||||||||| Sbjct: 51389 tcttcttcttcctcctctgcc 51409
>emb|AL121591.3|HSJ706G20 Human DNA sequence from clone RP4-706G20 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 91000 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 gtcttcttcttcctcctctgc 32 ||||||||||||||||||||| Sbjct: 49981 gtcttcttcttcctcctctgc 50001
>emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercontig; segment 3/3 Length = 227448 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgcc 33 ||||||||||||||||||||| Sbjct: 212993 tcttcttcttcctcctctgcc 212973
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 cgccggcggcttgctcatcgc 244 ||||||||||||||||||||| Sbjct: 956728 cgccggcggcttgctcatcgc 956748
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 207 tacgcccagcgcgccaccgccggcggcttgctcatcgccga 247 |||| ||||||||| || | |||||||||||||||||||| Sbjct: 8347988 tacggccagcgcgcgacgccgggcggcttgctcatcgccga 8347948 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 gaagcccatcgtcgccgccgtgca 348 |||||| ||||||||||||||||| Sbjct: 135064 gaagccgatcgtcgccgccgtgca 135087
>gb|CP000005.1| Gluconobacter oxydans 621H plasmid pGOX2, complete sequence Length = 26568 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 323 tggaagcccatcgtcgccgccgtgcacgccaagggcg 359 |||||||||||| |||||| || ||||||||||||| Sbjct: 14647 tggaagcccatcaccgccgcagttcacgccaagggcg 14683
>ref|NM_125110.4| Arabidopsis thaliana S-adenosylmethionine-dependent methyltransferase AT5G57280 mRNA, complete cds Length = 1099 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 14 tcttcttcttcctcctctgc 33
>gb|AY921642.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR5) mRNA, complete cds Length = 1533 Score = 40.1 bits (20), Expect = 5.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 246 gaggccacgggggtctccgacacggcgcagggatacaaggacac 289 |||||||||||||| || ||||| || || || ||||||||||| Sbjct: 353 gaggccacgggggtttcagacactgcccaagggtacaaggacac 396
>gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, complete sequence Length = 177038 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 142565 tcttcttcttcctcctctgc 142584
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tcttcttcctcctctgccat 35 |||||||||||||||||||| Sbjct: 3597406 tcttcttcctcctctgccat 3597425
>gb|AC168055.3| Mus musculus BAC clone RP24-360I1 from chromosome 10, complete sequence Length = 206775 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 991 tcttcttcttcctcctctgc 972
>ref|NM_192983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 801 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gaagcccatcgtcgccgccg 344 |||||||||||||||||||| Sbjct: 585 gaagcccatcgtcgccgccg 566
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 132349 tcttcttcttcctcctctgc 132368
>gb|AC104873.7| Mus musculus chromosome 1, clone RP23-434G18, complete sequence Length = 205266 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 138590 tcttcttcttcctcctctgc 138571
>gb|AC102825.6| Mus musculus chromosome 15, clone RP24-227B12, complete sequence Length = 153145 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 121415 tcttcttcttcctcctctgc 121396
>ref|XM_864872.1| PREDICTED: Bos taurus similar to Parathymosin (LOC613777), mRNA Length = 819 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 161 tcttcttcttcctcctctgc 142
>gb|AC160465.3| Mus musculus chromosome 8, clone RP23-267N9, complete sequence Length = 224985 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 164294 tcttcttcttcctcctctgc 164313
>gb|AY813019.1| Schistosoma japonicum SJCHGC09485 protein mRNA, complete cds Length = 643 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 tcatcagtcttcttcttcctcctc 29 |||| ||||||||||||||||||| Sbjct: 193 tcattagtcttcttcttcctcctc 216
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 320 gcgtggaagcccatcgtcgccgccgtgcacgccaagggcg 359 |||||||||| |||||||| | |||||||||||| |||| Sbjct: 2412628 gcgtggaagcgcatcgtcgacttcgtgcacgccaacggcg 2412589
>gb|AC125324.4| Mus musculus BAC clone RP23-284J23 from chromosome 1, complete sequence Length = 168982 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 19829 tcttcttcttcctcctctgc 19810
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tacgcccagcgcgccaccgccggc 230 |||| ||||||||||||||||||| Sbjct: 1597026 tacggccagcgcgccaccgccggc 1597003
>gb|AC134545.5| Mus musculus BAC clone RP24-470H2 from chromosome 18, complete sequence Length = 155887 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 64707 tcttcttcttcctcctctgc 64726
>gb|AC129016.4| Mus musculus BAC clone RP24-389J11 from chromosome 10, complete sequence Length = 160180 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 45530 tcttcttcttcctcctctgc 45511
>gb|AC126555.3| Mus musculus BAC clone RP23-474A17 from chromosome 13, complete sequence Length = 187704 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 172500 tcttcttcttcctcctctgc 172519
>ref|XM_814542.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511001.160) partial mRNA Length = 11763 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 7949 tcttcttcttcctcctctgc 7930
>ref|XM_815215.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506245.270) partial mRNA Length = 897 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 agtcttcttcttcctcctct 30 |||||||||||||||||||| Sbjct: 388 agtcttcttcttcctcctct 369
>ref|XM_809957.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506957.23) partial mRNA Length = 8777 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 8240 tcttcttcttcctcctctgc 8221
>gb|AC115119.5| Mus musculus BAC clone RP23-87M19 from 18, complete sequence Length = 174491 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cttcttcttcctcctctgcc 33 |||||||||||||||||||| Sbjct: 92652 cttcttcttcctcctctgcc 92633
>gb|AC098884.3| Mus musculus BAC clone RP23-122I23 from 3, complete sequence Length = 195428 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 49549 tcttcttcttcctcctctgc 49530
>gb|AC118198.7| Mus musculus chromosome 10, clone RP23-179O14, complete sequence Length = 225267 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 112412 tcttcttcttcctcctctgc 112431
>gb|AC102647.8| Mus musculus chromosome 10, clone RP23-269A24, complete sequence Length = 201670 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 160268 tcttcttcttcctcctctgc 160249
>ref|XM_661959.1| Cryptosporidium hominis TU502 trehalose synthase (Chro.80565) partial mRNA Length = 4197 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgccatt 36 ||||||||||||||||| |||||| Sbjct: 3223 tcttcttcttcctcctcagccatt 3246
>gb|AC160124.3| Mus musculus BAC clone RP23-297P22 from chromosome 9, complete sequence Length = 182831 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 catcagtcttcttcttcctcctct 30 ||||||||||| |||||||||||| Sbjct: 23981 catcagtcttcctcttcctcctct 24004
>gb|AY121766.1| Crocidura russula alpha adrenergic receptor 2B gene, partial cds Length = 1186 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 864 tcttcttcttcctcctctgc 845
>gb|AY065258.1| Arabidopsis thaliana putative protein carboxyl methylase (At5g57280) mRNA, complete cds Length = 1125 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 14 tcttcttcttcctcctctgc 33
>gb|AC173914.3| Nomascus leucogenys leucogenys clone CH271-445J13, complete sequence Length = 188657 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 cttcttcttcctcctctgcc 33 |||||||||||||||||||| Sbjct: 76009 cttcttcttcctcctctgcc 75990
>emb|AL163818.1|ATMAA21 Arabidopsis thaliana DNA chromosome 3, P1 clone MAA21 (ESSA project) Length = 79153 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 51399 tcttcttcttcctcctctgc 51418
>gb|AC157019.8| Mus musculus 10 BAC RP24-377N13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 233155 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 165173 tcttcttcttcctcctctgc 165192
>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE Length = 117135 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 gagcacgtcgaggcgtggaa 327 |||||||||||||||||||| Sbjct: 61484 gagcacgtcgaggcgtggaa 61465
>emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 in linkage group 22, complete sequence Length = 201928 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 gtgccgcagccgcacgccgccgtgtact 207 ||||||||||||| ||||||||| |||| Sbjct: 24813 gtgccgcagccgcccgccgccgtctact 24786
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggtgctggcgccgctggcga 159 |||||||||||||||||||| Sbjct: 897417 ggtgctggcgccgctggcga 897398
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tacgcccagcgcgccaccgccggc 230 |||| ||||||||||||||||||| Sbjct: 1981827 tacggccagcgcgccaccgccggc 1981804
>dbj|AB087688.1| Mycobacterium chelonae dnaA gene for DnaA, partial cds Length = 528 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 191 gcacgccgccgtgtactacgcccagcgc 218 ||||||||||| | |||||||||||||| Sbjct: 467 gcacgccgccgggaactacgcccagcgc 494
>gb|AC131248.14| Medicago truncatula clone mth2-28n22, complete sequence Length = 136333 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 aaaacaacttattcagctcttcag 75 ||||||||||||| |||||||||| Sbjct: 100454 aaaacaacttattaagctcttcag 100477
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 agtcttcttcttcctcctct 30 |||||||||||||||||||| Sbjct: 2344613 agtcttcttcttcctcctct 2344594
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 catcgccgaggccacggggg 258 |||||||||||||||||||| Sbjct: 4576032 catcgccgaggccacggggg 4576051
>gb|AC007233.7| Arabidopsis thaliana chromosome 2 clone T25M19 map ve013, complete sequence Length = 39858 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 gtcttcttcttcctcctctg 31 |||||||||||||||||||| Sbjct: 20745 gtcttcttcttcctcctctg 20726
>ref|XM_692858.1| PREDICTED: Danio rerio similar to tweety 1 isoform 1 (LOC569465), mRNA Length = 1926 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 389 tcttcttcttcctcctctgc 370
>gb|AC159327.8| Mus musculus 10 BAC RP23-207L3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215004 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 64645 tcttcttcttcctcctctgc 64626
>gb|AC153133.4| Mus musculus BAC clone RP24-389O11 from chromosome 13, complete sequence Length = 157007 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 45060 tcttcttcttcctcctctgc 45079
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggtgctggcgccgctggcga 159 |||||||||||||||||||| Sbjct: 3954073 ggtgctggcgccgctggcga 3954054 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggtgctggcgccgctggcga 159 |||||||||||||||||||| Sbjct: 764954 ggtgctggcgccgctggcga 764935
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 actcatcagtcttcttcttcctcctctg 31 |||| |||| |||||||||||||||||| Sbjct: 24833180 actcctcagccttcttcttcctcctctg 24833153
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tggacggcggagcacgtcgaggcg 322 |||||||||||||||| ||||||| Sbjct: 23551080 tggacggcggagcacggcgaggcg 23551103
>emb|AL928695.23| Zebrafish DNA sequence from clone CH211-217M19 in linkage group 16, complete sequence Length = 215878 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 24320 tcttcttcttcctcctctgc 24301
>emb|BX833918.1|CNS09Z27 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZB11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1013 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 2 tcttcttcttcctcctctgc 21
>gb|AC102574.9| Mus musculus chromosome 8, clone RP23-239K24, complete sequence Length = 193168 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 28875 tcttcttcttcctcctctgc 28856
>gb|AE004851.1| Pseudomonas aeruginosa PAO1, section 412 of 529 of the complete genome Length = 13101 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 gccgtgtactacgcccagcgcgcc 221 |||| ||||||||||||||||||| Sbjct: 9182 gccgagtactacgcccagcgcgcc 9205
>gb|AC122281.2| Mus musculus chromosome 16 clone RP23-239I17, complete sequence Length = 204608 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 113188 tcttcttcttcctcctctgc 113169
>dbj|AP003546.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672C09 Length = 145655 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gaagcccatcgtcgccgccg 344 |||||||||||||||||||| Sbjct: 11557 gaagcccatcgtcgccgccg 11538
>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0013G02 Length = 163419 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gaagcccatcgtcgccgccg 344 |||||||||||||||||||| Sbjct: 84689 gaagcccatcgtcgccgccg 84670
>gb|AC109146.26| Mus musculus chromosome 8, clone RP23-54G23, complete sequence Length = 197868 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 42795 tcttcttcttcctcctctgc 42814
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tggacggcggagcacgtcgaggcg 322 |||||||||||||||| ||||||| Sbjct: 3521 tggacggcggagcacggcgaggcg 3544
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tggacggcggagcacgtcgaggcg 322 |||||||||||||||| ||||||| Sbjct: 111473 tggacggcggagcacggcgaggcg 111496
>dbj|AB019233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB24 Length = 58589 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 28521 tcttcttcttcctcctctgc 28540
>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221267 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 193932 tcttcttcttcctcctctgc 193913
>emb|Y09113.1|MMY09113 M.macrocarpa mRNA for dioxygenase Length = 1479 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 gtcttcttcttcctcctctg 31 |||||||||||||||||||| Sbjct: 204 gtcttcttcttcctcctctg 223
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 195 gccgccgtgtactacgcccagcgcgcca 222 ||||||| ||||||||||||||||||| Sbjct: 558550 gccgccgactactacgcccagcgcgcca 558523 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 agcccatcgtcgccgccgtg 346 |||||||||||||||||||| Sbjct: 40902 agcccatcgtcgccgccgtg 40921
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 gtactacgcccagcgcgccaccgc 226 ||||||||| |||||||||||||| Sbjct: 1270681 gtactacgcgcagcgcgccaccgc 1270704
>gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, complete sequence Length = 175641 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 74976 tcttcttcttcctcctctgc 74995
>gb|AC114594.15| Mus musculus chromosome 1, clone RP23-81J19, complete sequence Length = 144466 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 110136 tcttcttcttcctcctctgc 110117
>gb|AC153829.7| Mus musculus 10 BAC RP23-116E8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188043 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 53689 tcttcttcttcctcctctgc 53708
>emb|AL157957.4|CNS01RGF Human chromosome 14 DNA sequence BAC R-969O13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 202212 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cagtcttcttcttcctcctc 29 |||||||||||||||||||| Sbjct: 92228 cagtcttcttcttcctcctc 92247
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 tacgcccagcgcgccaccgccggc 230 |||| ||||||||||||||||||| Sbjct: 2003860 tacggccagcgcgccaccgccggc 2003837
>emb|CT009564.11| Mouse DNA sequence from clone RP23-16F13 on chromosome 17, complete sequence Length = 157729 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 12255 tcttcttcttcctcctctgc 12236
>gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, complete sequence Length = 195993 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cttcagcaatggagcccatc 89 |||||||||||||||||||| Sbjct: 18667 cttcagcaatggagcccatc 18686
>gb|AC155832.2| Mus musculus 10 BAC RP24-147J7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 153257 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 105956 tcttcttcttcctcctctgc 105937
>gb|AC123677.6| Mus musculus chromosome 15, clone RP23-275M16, complete sequence Length = 149858 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 29583 tcttcttcttcctcctctgc 29602
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 actcatcagtcttcttcttcctcctctg 31 |||| |||| |||||||||||||||||| Sbjct: 24761386 actcctcagccttcttcttcctcctctg 24761359
>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132741 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 actcatcagtcttcttcttcctcctctg 31 |||| |||| |||||||||||||||||| Sbjct: 131688 actcctcagccttcttcttcctcctctg 131715
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tggtgctggcgccgctggcg 158 |||||||||||||||||||| Sbjct: 5569119 tggtgctggcgccgctggcg 5569100
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 actcatcagtcttcttcttcctcctctg 31 |||| |||| |||||||||||||||||| Sbjct: 140337 actcctcagccttcttcttcctcctctg 140310
>gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, complete sequence Length = 151011 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 48606 tcttcttcttcctcctctgc 48625
>gb|DQ294584.1| Polychytrium aggregatum isolate AFTOL-ID-24 RNA polymerase II largest subunit (RPB1) gene, partial cds Length = 3389 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gcccatcgtcgccgccgtgc 347 |||||||||||||||||||| Sbjct: 389 gcccatcgtcgccgccgtgc 370
>gb|AC153843.6| Mus musculus 10 BAC RP23-273P15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 202968 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 174059 tcttcttcttcctcctctgc 174078
>emb|CT030709.6| Mouse DNA sequence from clone RP23-268C22 on chromosome 9, complete sequence Length = 206089 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 7 catcagtcttcttcttcctcctct 30 ||||||||||| |||||||||||| Sbjct: 96237 catcagtcttcctcttcctcctct 96214
>emb|AL627214.15| Mouse DNA sequence from clone RP23-357K18 on chromosome 4, complete sequence Length = 182829 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 91805 tcttcttcttcctcctctgc 91786
>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete sequence Length = 160615 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttcctcctctgc 32 |||||||||||||||||||| Sbjct: 16001 tcttcttcttcctcctctgc 15982 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,161,461 Number of Sequences: 3902068 Number of extensions: 4161461 Number of successful extensions: 141810 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 139114 Number of HSP's gapped (non-prelim): 2677 length of query: 377 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 355 effective length of database: 17,147,199,772 effective search space: 6087255919060 effective search space used: 6087255919060 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
