ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet98c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PP2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC... 28 9.1

>PP2C1_CAEEL (P49595) Probable protein phosphatase 2C F42G9.1 (EC 3.1.3.16)|
           (PP2C)
          Length = 491

 Score = 27.7 bits (60), Expect = 9.1
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = +2

Query: 2   CRRGKRVPPMAAVAPTPEDHVAADAAKLVAGHVEDDEQQGG 124
           CR GK V    +V   PED V  +      G +ED    GG
Sbjct: 342 CRNGKAVD--LSVDHKPEDEVETNRIHAAGGQIEDGRVNGG 380


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.123    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,612,897
Number of Sequences: 219361
Number of extensions: 101919
Number of successful extensions: 345
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 80,573,946
effective HSP length: 24
effective length of database: 75,309,282
effective search space used: 1807422768
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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