ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet98c03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY360388.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0038J12, complete sequence Length = 131944 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 112896 aagatgaggccgatcctgatgaaggggcacgagcgcccgctcacgttcctccggtacaac 112955 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 || ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 112956 cgcgacggggacctcctcttctcctgcgccaaggaccacacccccaacgtctggttcgcc 113015 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 113016 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgccgtctggtcctgcgac 113075 Query: 278 gtctcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgg 337 ||||||||| |||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 113076 gtctcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgg 113135 Query: 338 gacgtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtc 397 ||||| |||| |||| ||| |||||||||||| | |||||||||||||| |||||||| Sbjct: 113136 gacgtgcagaccgggagggagctcttcaccttccgcttcgacgcccccgcccgctccgtt 113195 Query: 398 gatttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || || ||||| |||||| ||| || |||||||||||||||| |||||| Sbjct: 113196 gaatttgccattggcgacggcctcgccgtcatcaccaccgacaacttcat 113245
>gb|AY360389.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0024A05, complete sequence Length = 82985 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 7415 aagatgaggccgatcctgatgaaggggcacgagcgcccgctcacgttcctccggtacaac 7474 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 || ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 7475 cgcgacggggacctcctcttctcctgcgccaaggaccacacccccaacgtctggttcgcc 7534 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 7535 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgccgtctggtcctgcgac 7594 Query: 278 gtctcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgg 337 ||||||||| |||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 7595 gtctcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgg 7654 Query: 338 gacgtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtc 397 ||||| |||| |||| ||| |||||||||||| | |||||||||||||| |||||||| Sbjct: 7655 gacgtgcagaccgggagggagctcttcaccttccgcttcgacgcccccgcccgctccgtt 7714 Query: 398 gatttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || || ||||| |||||| ||| || |||||||||||||||| |||||| Sbjct: 7715 gaatttgccattggcgacggcctcgccgtcatcaccaccgacaacttcat 7764
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Minus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 12906275 aagatgaggccgatcctgatgaaggggcacgagcgcccgctcacgttcctccggtacaac 12906216 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 || ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 12906215 cgcgacggggacctcctcttctcctgcgccaaggaccacacccccaacgtctggttcgcc 12906156 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 12906155 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgccgtctggtcctgcgac 12906096 Query: 278 gtctcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgg 337 ||||||||| |||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 12906095 gtctcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgg 12906036 Query: 338 gacgtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtc 397 ||||| |||| |||| ||| |||||||||||| | |||||||||||||| |||||||| Sbjct: 12906035 gacgtgcagaccgggagggagctcttcaccttccgcttcgacgcccccgcccgctccgtt 12905976 Query: 398 gatttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || || ||||| |||||| ||| || |||||||||||||||| |||||| Sbjct: 12905975 gaatttgccattggcgacggcctcgccgtcatcaccaccgacaacttcat 12905926
>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone: B1052H09 Length = 190806 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Minus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 43255 aagatgaggccgatcctgatgaaggggcacgagcgcccgctcacgttcctccggtacaac 43196 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 || ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 43195 cgcgacggggacctcctcttctcctgcgccaaggaccacacccccaacgtctggttcgcc 43136 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 43135 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgccgtctggtcctgcgac 43076 Query: 278 gtctcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgg 337 ||||||||| |||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 43075 gtctcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgg 43016 Query: 338 gacgtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtc 397 ||||| |||| |||| ||| |||||||||||| | |||||||||||||| |||||||| Sbjct: 43015 gacgtgcagaccgggagggagctcttcaccttccgcttcgacgcccccgcccgctccgtt 42956 Query: 398 gatttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || || ||||| |||||| ||| || |||||||||||||||| |||||| Sbjct: 42955 gaatttgccattggcgacggcctcgccgtcatcaccaccgacaacttcat 42906
>dbj|AP005693.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0061E21 Length = 155085 Score = 377 bits (190), Expect = e-101 Identities = 310/350 (88%) Strand = Plus / Minus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106793 aagatgaggccgatcctgatgaaggggcacgagcgcccgctcacgttcctccggtacaac 106734 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 || ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 106733 cgcgacggggacctcctcttctcctgcgccaaggaccacacccccaacgtctggttcgcc 106674 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 106673 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgccgtctggtcctgcgac 106614 Query: 278 gtctcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgg 337 ||||||||| |||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 106613 gtctcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgg 106554 Query: 338 gacgtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtc 397 ||||| |||| |||| ||| |||||||||||| | |||||||||||||| |||||||| Sbjct: 106553 gacgtgcagaccgggagggagctcttcaccttccgcttcgacgcccccgcccgctccgtt 106494 Query: 398 gatttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || || ||||| |||||| ||| || |||||||||||||||| |||||| Sbjct: 106493 gaatttgccattggcgacggcctcgccgtcatcaccaccgacaacttcat 106444
>ref|XM_481483.1| Oryza sativa (japonica cultivar-group), mRNA Length = 981 Score = 371 bits (187), Expect = 1e-99 Identities = 307/347 (88%) Strand = Plus / Plus Query: 101 atgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaaccgg 160 |||||||| || || |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 atgaggccgatcctgatgaaggggcacgagcgcccgctcacgttcctccggtacaaccgc 60 Query: 161 gacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcggac 220 ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| ||| Sbjct: 61 gacggggacctcctcttctcctgcgccaaggaccacacccccaacgtctggttcgccgac 120 Query: 221 aacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgatgtc 280 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| Sbjct: 121 aacggcgaccgcctcggcacctaccgcggccacaacggcgccgtctggtcctgcgacgtc 180 Query: 281 tcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgggac 340 |||||| |||||||||| || ||||| || |||||||||||||| ||||||||||||||| Sbjct: 181 tcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgggac 240 Query: 341 gtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtcgat 400 || |||| |||| ||| |||||||||||| | |||||||||||||| |||||||| || Sbjct: 241 gtgcagaccgggagggagctcttcaccttccgcttcgacgcccccgcccgctccgttgaa 300 Query: 401 ttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || ||||| |||||| ||| || |||||||||||||||| |||||| Sbjct: 301 tttgccattggcgacggcctcgccgtcatcaccaccgacaacttcat 347
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11, complete sequence Length = 146677 Score = 369 bits (186), Expect = 5e-99 Identities = 309/350 (88%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || ||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 120501 aagatgaggccgatcctgatgaaggggcacgagcggccgctgacgttcctccggtacaac 120560 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 || ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 120561 cgcgacggggacctcctcttctcgtgcgccaaggaccacacccccaacgtctggttcgcc 120620 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||| Sbjct: 120621 gacaacggcgaccgcctcggcacctacagcggccacaacggcgccgtctggtcctgcgac 120680 Query: 278 gtctcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgg 337 ||||||||| |||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 120681 gtctcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgg 120740 Query: 338 gacgtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtc 397 |||||| |||| ||| ||| |||||||||||| | |||||||||||||| ||||||||| Sbjct: 120741 gacgtccagaccggggcggagctcttcaccttccgcttcgacgcccccgcccgctccgtc 120800 Query: 398 gatttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || || |||||||||||| ||| || |||||||||||||||| |||||| Sbjct: 120801 gagttcgccatcggcgacggcctcgccgtcatcaccaccgacaacttcat 120850
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 369 bits (186), Expect = 5e-99 Identities = 309/350 (88%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || ||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 9348556 aagatgaggccgatcctgatgaaggggcacgagcggccgctgacgttcctccggtacaac 9348615 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 || ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 9348616 cgcgacggggacctcctcttctcgtgcgccaaggaccacacccccaacgtctggttcgcc 9348675 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||| Sbjct: 9348676 gacaacggcgaccgcctcggcacctacagcggccacaacggcgccgtctggtcctgcgac 9348735 Query: 278 gtctcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgg 337 ||||||||| |||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 9348736 gtctcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgg 9348795 Query: 338 gacgtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtc 397 |||||| |||| ||| ||| |||||||||||| | |||||||||||||| ||||||||| Sbjct: 9348796 gacgtccagaccggggcggagctcttcaccttccgcttcgacgcccccgcccgctccgtc 9348855 Query: 398 gatttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || || |||||||||||| ||| || |||||||||||||||| |||||| Sbjct: 9348856 gagttcgccatcggcgacggcctcgccgtcatcaccaccgacaacttcat 9348905
>dbj|AK122060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115B09, full insert sequence Length = 1437 Score = 369 bits (186), Expect = 5e-99 Identities = 309/350 (88%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 147 aagatgaggccgatcctgatgaaggggcacgagcgcccgctcacgttcctccggtacaac 206 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 || ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 207 cgcgacggggacctcctcttctcctgcgccaaggaccacacccccaacgtctggttcgcc 266 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 267 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgccgtctggtcctgcgac 326 Query: 278 gtctcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgg 337 ||||||||| |||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 327 gtctcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgg 386 Query: 338 gacgtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtc 397 ||||| |||| |||| ||| ||| |||||||| | |||||||||||||| |||||||| Sbjct: 387 gacgtgcagaccgggagggagctcctcaccttccgcttcgacgcccccgcccgctccgtt 446 Query: 398 gatttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || || ||||| |||||| ||| || |||||||||||||||| |||||| Sbjct: 447 gaatttgccattggcgacggcctcgccgtcatcaccaccgacaacttcat 496
>dbj|AK111524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P07, full insert sequence Length = 1396 Score = 369 bits (186), Expect = 5e-99 Identities = 309/350 (88%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || ||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 122 aagatgaggccgatcctgatgaaggggcacgagcggccgctgacgttcctccggtacaac 181 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 || ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 182 cgcgacggggacctcctcttctcgtgcgccaaggaccacacccccaacgtctggttcgcc 241 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||| Sbjct: 242 gacaacggcgaccgcctcggcacctacagcggccacaacggcgccgtctggtcctgcgac 301 Query: 278 gtctcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgg 337 ||||||||| |||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 302 gtctcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgg 361 Query: 338 gacgtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtc 397 |||||| |||| ||| ||| |||||||||||| | |||||||||||||| ||||||||| Sbjct: 362 gacgtccagaccggggcggagctcttcaccttccgcttcgacgcccccgcccgctccgtc 421 Query: 398 gatttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || || |||||||||||| ||| || |||||||||||||||| |||||| Sbjct: 422 gagttcgccatcggcgacggcctcgccgtcatcaccaccgacaacttcat 471
>dbj|AK104927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-H11, full insert sequence Length = 1395 Score = 369 bits (186), Expect = 5e-99 Identities = 309/350 (88%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || ||||||||||||||||| ||||| |||||||| ||||||| Sbjct: 121 aagatgaggccgatcctgatgaaggggcacgagcggccgctgacgttcctccggtacaac 180 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 || ||||| ||||| || ||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 181 cgcgacggggacctcctcttctcgtgcgccaaggaccacacccccaacgtctggttcgcc 240 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||| Sbjct: 241 gacaacggcgaccgcctcggcacctacagcggccacaacggcgccgtctggtcctgcgac 300 Query: 278 gtctcccgccactccacccgtcttatcacggggagcgccgaccagactgccaagctctgg 337 ||||||||| |||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 301 gtctcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgg 360 Query: 338 gacgtcaagacggggaaggaactcttcaccttcagattcgacgcccccgcacgctccgtc 397 |||||| |||| ||| ||| |||||||||||| | |||||||||||||| ||||||||| Sbjct: 361 gacgtccagaccggggcggagctcttcaccttccgcttcgacgcccccgcccgctccgtc 420 Query: 398 gatttagccatcggcgaccacctggcggtcatcaccaccgacagcttcat 447 || || |||||||||||| ||| || |||||||||||||||| |||||| Sbjct: 421 gagttcgccatcggcgacggcctcgccgtcatcaccaccgacaacttcat 470
>gb|AF335551.1|AF335551 Phaseolus vulgaris TGF-beta receptor-interacting protein 1 mRNA, complete cds Length = 1143 Score = 139 bits (70), Expect = 9e-30 Identities = 154/182 (84%) Strand = Plus / Plus Query: 101 atgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaaccgg 160 |||||||| ||| | |||||||| |||||| | || ||||||||||| ||||||||| | Sbjct: 16 atgaggccgattttgatgaagggccacgagaggccactcacgttcctcaagtacaacaga 75 Query: 161 gacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcggac 220 |||||||| || || ||||| |||||||||||||||| ||| ||||| |||| |||||| Sbjct: 76 gacggcgatctcctcttctcctgcgccaaggaccacaaccctaccgtttggtttgcggac 135 Query: 221 aacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgatgtc 280 ||||| || ||||| ||||| || ||||||||||||||||| || |||| |||||| ||| Sbjct: 136 aacggagaacgccttggcacttatcgcggccacaacggcgccgtttggtgctgcgacgtc 195 Query: 281 tc 282 || Sbjct: 196 tc 197
>ref|NM_201968.1| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding AT2G46280 (TRIP-1) transcript variant AT2G46280.3 mRNA, complete cds Length = 1391 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 110 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 169 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 170 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 229 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 230 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 289 Query: 278 gtctcccg 285 |||||||| Sbjct: 290 gtctcccg 297
>ref|NM_130191.3| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding AT2G46280 (TRIP-1) transcript variant AT2G46280.1 mRNA, complete cds Length = 1311 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 110 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 169 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 170 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 229 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 230 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 289 Query: 278 gtctcccg 285 |||||||| Sbjct: 290 gtctcccg 297
>ref|NM_180119.1| Arabidopsis thaliana TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1); nucleotide binding AT2G46280 (TRIP-1) transcript variant AT2G46280.2 mRNA, complete cds Length = 1255 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 54 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 113 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 114 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 173 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 174 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 233 Query: 278 gtctcccg 285 |||||||| Sbjct: 234 gtctcccg 241
>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete sequence Length = 110149 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 18172 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 18231 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 18232 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 18291 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 18292 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 18351 Query: 278 gtctcccg 285 |||||||| Sbjct: 18352 gtctcccg 18359
>gb|AF370485.1|AF370485 Arabidopsis thaliana eukaryotic translation initiation factor 3 delta subunit (At2g46280; T3F17.7) mRNA, complete cds Length = 1205 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 54 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 113 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 114 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 173 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 174 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 233 Query: 278 gtctcccg 285 |||||||| Sbjct: 234 gtctcccg 241
>emb|BX820114.1|CNS0AAC4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS75ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1142 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 28 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 87 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 88 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 147 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 148 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 207 Query: 278 gtctcccg 285 |||||||| Sbjct: 208 gtctcccg 215
>emb|BX820112.1|CNS0AAC3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZH09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1239 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 28 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 87 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 88 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 147 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 148 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 207 Query: 278 gtctcccg 285 |||||||| Sbjct: 208 gtctcccg 215
>emb|BX820707.1|CNS0A9OS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1142 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 28 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 87 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 88 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 147 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 148 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 207 Query: 278 gtctcccg 285 |||||||| Sbjct: 208 gtctcccg 215
>emb|BX820483.1|CNS0A9I1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1117 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 28 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 87 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 88 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 147 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 148 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 207 Query: 278 gtctcccg 285 |||||||| Sbjct: 208 gtctcccg 215
>emb|BX820257.1|CNS0A9MY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH13ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1203 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 107 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 166 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 167 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 226 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 227 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 286 Query: 278 gtctcccg 285 |||||||| Sbjct: 287 gtctcccg 294
>emb|BX820796.1|CNS0A830 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1370 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 87 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 146 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 147 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 206 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 207 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 266 Query: 278 gtctcccg 285 |||||||| Sbjct: 267 gtctcccg 274
>emb|BX819639.1|CNS0A80H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS10ZA11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1228 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 108 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 167 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 168 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 227 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 228 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 287 Query: 278 gtctcccg 285 |||||||| Sbjct: 288 gtctcccg 295
>emb|BX842024.1|CNS09YA9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS63ZG03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1086 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 28 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 87 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 88 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 147 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 148 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 207 Query: 278 gtctcccg 285 |||||||| Sbjct: 208 gtctcccg 215
>gb|U36765.1|ATU36765 Arabidopsis thaliana TGF-beta receptor interacting protein 1 homolog mRNA, complete cds Length = 1138 Score = 79.8 bits (40), Expect = 7e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 3 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 62 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacgcg 217 | || || || || || ||||| ||||||||||||||||| |||||| |||||| || Sbjct: 63 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgcc 122 Query: 218 gacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcgat 277 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| ||| Sbjct: 123 gataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtgat 182 Query: 278 gtctcccg 285 |||||||| Sbjct: 183 gtctcccg 190
>gb|AY064633.1| Arabidopsis thaliana eukaryotic translation initiation factor 3 delta subunit (At2g46280; T3F17.7) mRNA, complete cds Length = 1011 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 176 ttctcatgcgccaaggaccacacccccaccgtctggtacgcggacaacggcgaccgcctc 235 ||||| ||||||||||||||||| |||||| |||||| || || |||||||| ||||| Sbjct: 76 ttctcctgcgccaaggaccacacacccaccctctggtttgccgataacggcgagcgcctt 135 Query: 236 ggcacctaccgcggccacaacggcgcggtatggtcctgcgatgtctcccg 285 || || ||||| || |||||||| || || |||| ||| ||||||||||| Sbjct: 136 ggaacttaccgtggtcacaacggtgctgtttggtgctgtgatgtctcccg 185
>gb|AF285835.1|AF285835 Arabidopsis thaliana eukaryotic initiation factor 3I1 subunit (TIF3I1) mRNA, complete cds Length = 1200 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 176 ttctcatgcgccaaggaccacacccccaccgtctggtacgcggacaacggcgaccgcctc 235 ||||| ||||||||||||||||| |||||| |||||| || || |||||||| ||||| Sbjct: 130 ttctcctgcgccaaggaccacacacccaccctctggtttgccgataacggcgagcgcctt 189 Query: 236 ggcacctaccgcggccacaacggcgcggtatggtcctgcgatgtctcccg 285 || || ||||| || |||||||| || || |||| ||| ||||||||||| Sbjct: 190 ggaacttaccgtggtcacaacggtgctgtttggtgctgtgatgtctcccg 239
>emb|BX819310.1|CNS0AADQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1098 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 182 tgcgccaaggaccacacccccaccgtctggtacgcggacaacggcgaccgcctcggcacc 241 ||||||||||||||||| |||||| |||||| || || |||||||| ||||| || || Sbjct: 70 tgcgccaaggaccacacacccaccctctggtttgccgataacggcgagcgccttggaact 129 Query: 242 taccgcggccacaacggcgcggtatggtcctgcgatgtctcccg 285 ||||| || |||||||| || || |||| ||| ||||||||||| Sbjct: 130 taccgtggtcacaacggtgctgtttggtgctgtgatgtctcccg 173
>emb|BX822030.1|CNS0A9BD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL93ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1117 Score = 61.9 bits (31), Expect = 2e-06 Identities = 92/111 (82%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 176 ttctcatgcgccaaggaccacacccccaccgtctggtacgcggacaacggcgaccgcctc 235 ||||| ||||||||||||||||| |||||| |||||| || || |||||||| ||||| Sbjct: 106 ttctcctgcgccaaggaccacacacccaccctctggtttgccgataacggcgagcgcctt 165 Query: 236 ggcaccta-ccgcggccacaacggcgcggtatggtcctgcgatgtctcccg 285 || || || ||| || |||||||| || || |||| ||| ||||||||||| Sbjct: 166 ggaacttacccgtggtcacaacggtgctgtttggtgctgtgatgtctcccg 216
>gb|AC171734.1| Lycopersicon esculentum chromosome 11 clone C11HBa0064J13, complete sequence Length = 118649 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 176 ttctcatgcgccaaggaccacacccccaccgtctggtacgcggacaacggcgaccgcctc 235 ||||| ||||| |||||||| ||||| ||||| |||| || || |||||||| |||||| Sbjct: 105954 ttctcttgcgctaaggaccatacccctaccgtttggtttgccgataacggcgagcgcctc 106013 Query: 236 ggcacctaccgcggccacaacgg 258 ||||| ||||| ||||| ||||| Sbjct: 106014 ggcacttaccgtggccataacgg 106036
>emb|BX820839.1|CNS0A9OL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH74ZE08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1227 Score = 58.0 bits (29), Expect = 3e-05 Identities = 150/189 (79%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 98 aagatgaggcctattctcatgaaggggcacgagcgcccgctcacgttcctgaagtacaac 157 ||||||||||| || || |||||||| || || || || | ||||| |||| ||||||| Sbjct: 28 aagatgaggccgatcctgatgaagggacatgaacgtccattgacgtttctgaggtacaac 87 Query: 158 cgggacggcgacctactgttctcatgcgccaaggaccacacccccaccgtctggtacg-c 216 | || || || || || ||||| ||||||||||||||||| |||||| |||||| | | Sbjct: 88 agagaaggagatctgcttttctcctgcgccaaggaccacacacccaccctctggtttgtc 147 Query: 217 ggacaacggcgaccgcctcggcacctaccgcggccacaacggcgcggtatggtcctgcga 276 || |||||||| ||||| || || ||||| || |||||||| || || |||| ||| | Sbjct: 148 cgataacggcgagcgccttggaacttaccgtggtcacaacggtgctgtttggtgctgtta 207 Query: 277 tgtctcccg 285 ||||||||| Sbjct: 208 tgtctcccg 216
>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence Length = 130054 Score = 48.1 bits (24), Expect = 0.025 Identities = 84/104 (80%) Strand = Plus / Plus Query: 143 ttcctgaagtacaaccgggacggcgacctactgttctcatgcgccaaggaccacaccccc 202 ||||| ||||||||||| |||||||| || || ||||| || || || || |||| ||| Sbjct: 59219 ttcctcaagtacaaccgtgacggcgatcttcttttctcttgtgctaaagatcacaatccc 59278 Query: 203 accgtctggtacgcggacaacggcgaccgcctcggcacctaccg 246 ||||| |||| || || |||||||| || |||||||| ||||| Sbjct: 59279 accgtttggtttgccgataacggcgaacgtctcggcacttaccg 59322
>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence Length = 140624 Score = 48.1 bits (24), Expect = 0.025 Identities = 84/104 (80%) Strand = Plus / Minus Query: 143 ttcctgaagtacaaccgggacggcgacctactgttctcatgcgccaaggaccacaccccc 202 ||||| ||||||||||| |||||||| || || ||||| || || || || |||| ||| Sbjct: 86284 ttcctcaagtacaaccgtgacggcgatcttcttttctcttgtgctaaagatcacaatccc 86225 Query: 203 accgtctggtacgcggacaacggcgaccgcctcggcacctaccg 246 ||||| |||| || || |||||||| || |||||||| ||||| Sbjct: 86224 accgtttggtttgccgataacggcgaacgtctcggcacttaccg 86181
>gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030E22, complete sequence Length = 135468 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 425 gtcatcaccaccgacagcttcat 447 ||||||||||||||||||||||| Sbjct: 101981 gtcatcaccaccgacagcttcat 102003
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 425 gtcatcaccaccgacagcttcat 447 ||||||||||||||||||||||| Sbjct: 22544836 gtcatcaccaccgacagcttcat 22544858
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.097 Identities = 23/23 (100%) Strand = Plus / Plus Query: 425 gtcatcaccaccgacagcttcat 447 ||||||||||||||||||||||| Sbjct: 22854747 gtcatcaccaccgacagcttcat 22854769
>ref|XM_222317.3| PREDICTED: Rattus norvegicus matrix metalloproteinase 19 (predicted) (Mmp19_predicted), mRNA Length = 1658 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 323 actgccaagctctgggacgtca 344 |||||||||||||||||||||| Sbjct: 668 actgccaagctctgggacgtca 647
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 cgaccgcctcggcacctaccgc 247 |||||||||||||||||||||| Sbjct: 126740 cgaccgcctcggcacctaccgc 126719
>ref|NM_197136.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0051D19.27), mRNA Length = 1956 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 ccggcggcggcgtcagcggcagcga 79 |||||||||||| |||||||||||| Sbjct: 644 ccggcggcggcggcagcggcagcga 668
>gb|AF307776.1| Homo sapiens beta-1 adrenergic receptor gene, 5' UTR and partial cds Length = 3113 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcgac 80 ||||||||||| ||||||||||||| Sbjct: 2910 cggcggcggcggcagcggcagcgac 2934
>ref|XM_417265.1| PREDICTED: Gallus gallus similar to F-box-WD40 repeat protein 6 (LOC419074), mRNA Length = 2359 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 323 actgccaagctctgggacgtcaagacggg 351 |||| ||||||||||||| |||||||||| Sbjct: 1933 actgtcaagctctgggacctcaagacggg 1961
>ref|NM_026988.1| Mus musculus RIKEN cDNA 2610009E16 gene (2610009E16Rik), mRNA Length = 1184 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 ggcggcggcgtcagcggcagcgacg 81 |||||||||| |||||||||||||| Sbjct: 229 ggcggcggcggcagcggcagcgacg 205
>gb|AC137901.7| Mus musculus chromosome 6, clone RP23-81E17, complete sequence Length = 158419 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 ggcggcggcgtcagcggcagcgacg 81 |||||||||| |||||||||||||| Sbjct: 32462 ggcggcggcggcagcggcagcgacg 32438
>gb|AY567837.1| Homo sapiens adrenergic, beta-1-, receptor (ADRB1) gene, complete cds Length = 16612 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcgac 80 ||||||||||| ||||||||||||| Sbjct: 7517 cggcggcggcggcagcggcagcgac 7541
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 ccggcggcggcgtcagcggcagcga 79 |||||||||||| |||||||||||| Sbjct: 30073 ccggcggcggcggcagcggcagcga 30049
>emb|BX537348.8| Zebrafish DNA sequence from clone CH211-218O21 in linkage group 8, complete sequence Length = 207282 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 agatccccacacttccctagcccta 38 |||||||||||||||||| |||||| Sbjct: 51255 agatccccacacttccctcgcccta 51279
>gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosome 6, complete sequence Length = 202948 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 57 ggcggcggcgtcagcggcagcgacg 81 |||||||||| |||||||||||||| Sbjct: 93966 ggcggcggcggcagcggcagcgacg 93990
>gb|BC045633.1| Homo sapiens cDNA clone IMAGE:5284411 Length = 3830 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcgac 80 ||||||||||| ||||||||||||| Sbjct: 813 cggcggcggcggcagcggcagcgac 789
>dbj|AK011360.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610009E16 product:PARATHYMOSIN (ZINC-BINDING 11.5 KDA PROTEIN) homolog [Rattus norvegicus], full insert sequence Length = 1148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 ggcggcggcgtcagcggcagcgacg 81 |||||||||| |||||||||||||| Sbjct: 244 ggcggcggcggcagcggcagcgacg 220
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 ccggcggcggcgtcagcggcagcga 79 |||||||||||| |||||||||||| Sbjct: 18183055 ccggcggcggcggcagcggcagcga 18183079 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccggcggcggcgtcagcggc 74 |||||||||||||||||||| Sbjct: 5957376 ccggcggcggcgtcagcggc 5957395
>gb|BC052699.1| Mus musculus RIKEN cDNA 2610009E16 gene, mRNA (cDNA clone MGC:64697 IMAGE:5715702), complete cds Length = 1184 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 ggcggcggcgtcagcggcagcgacg 81 |||||||||| |||||||||||||| Sbjct: 229 ggcggcggcggcagcggcagcgacg 205
>gb|AF272889.1|AF272889 Homo sapiens beta-1 adrenergic receptor gene, promoter region Length = 3117 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcgac 80 ||||||||||| ||||||||||||| Sbjct: 2916 cggcggcggcggcagcggcagcgac 2940
>gb|AC005886.2|AC005886 b240g16, complete sequence Length = 134011 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcgac 80 ||||||||||| ||||||||||||| Sbjct: 26077 cggcggcggcggcagcggcagcgac 26053
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 cgagcgcccgctcacgttcct 147 ||||||||||||||||||||| Sbjct: 3400496 cgagcgcccgctcacgttcct 3400516
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 55 ccggcggcggcgtcagcggcagcga 79 |||||||||||| |||||||||||| Sbjct: 18192308 ccggcggcggcggcagcggcagcga 18192332 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 ccggcggcggcgtcagcggc 74 |||||||||||||||||||| Sbjct: 5958562 ccggcggcggcgtcagcggc 5958581
>emb|AL355543.13| Human DNA sequence from clone RP11-86E10 on chromosome 10 Contains the ADRB1 gene for adrenergic beta-1- receptor, a ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1) pseudogene, the gene for CTCL tumor antigen L14-2 (FLJ10188 DKFZp762M1412 FLJ32946 FLJ37179 FLJ21086 FLJ32946 FLJ35301), the 5' end of the TDRD1 gene for tudor domain containing 1 and three CpG islands, complete sequence Length = 179009 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcgac 80 ||||||||||| ||||||||||||| Sbjct: 35884 cggcggcggcggcagcggcagcgac 35908
>gb|AC142254.4| Mus musculus BAC clone RP24-545G7 from 6, complete sequence Length = 159818 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 ggcggcggcgtcagcggcagcgacg 81 |||||||||| |||||||||||||| Sbjct: 16341 ggcggcggcggcagcggcagcgacg 16317
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 cccggcggcggcgtcagcggc 74 ||||||||||||||||||||| Sbjct: 4304680 cccggcggcggcgtcagcggc 4304660
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 cccggcggcggcgtcagcggc 74 ||||||||||||||||||||| Sbjct: 4237458 cccggcggcggcgtcagcggc 4237438
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 cccggcggcggcgtcagcggc 74 ||||||||||||||||||||| Sbjct: 3414897 cccggcggcggcgtcagcggc 3414917
>gb|AC009749.9| Drosophila melanogaster clone BACR40I04, complete sequence Length = 161276 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 149 aagtacaaccgggacggcgacctactgttctcatgcgccaagga 192 ||||||||||| || |||||||| || ||||| ||| ||||||| Sbjct: 43683 aagtacaaccgcgagggcgacctgctcttctcctgctccaagga 43726
>ref|XM_549823.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1018 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 44 cggcggcggcggcagcggcagcga 21
>ref|NM_195286.1| Oryza sativa (japonica cultivar-group) putative proline-rich cell wall protein (OSJNBa0040E17.25), mRNA Length = 657 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ccggcggcggcgtcagcggc 74 |||||||||||||||||||| Sbjct: 217 ccggcggcggcgtcagcggc 198
>ref|XM_474619.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 252 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 cggcggcgtcagcggcagcgacga 82 ||||||||||| |||||||||||| Sbjct: 132 cggcggcgtcatcggcagcgacga 155
>gb|BT017837.1| Zea mays clone EL01N0509G01.c mRNA sequence Length = 1387 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 ccggcggcggcgtcagcggcagcgacga 82 |||| ||||||| ||||||||||||||| Sbjct: 229 ccggaggcggcgacagcggcagcgacga 256
>gb|AY023139.1| Oryza sativa microsatellite MRG5464 containing (GCC)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 113 cggcggcggcggcagcggcagcga 90
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcga 79 |||||||| ||||||||||||||| Sbjct: 82194 cggcggcgccgtcagcggcagcga 82217
>ref|XM_580720.2| PREDICTED: Bos taurus similar to zinc finger, matrin type 1 isoform 1 (LOC504576), partial mRNA Length = 2361 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 161 cggcggcggcggcagcggcagcga 184
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 |||||||| ||||||||||||||| Sbjct: 16502139 cggcggcgccgtcagcggcagcga 16502116
>emb|AL158155.24| Human DNA sequence from clone RP11-397D12 on chromosome 9p12-13.3 Contains the 3' end of a novel gene (FLJ22611), a novel gene, the GRHPR gene for glyoxylate reductase/hydroxypyruvate reductase, a novel gene (KIAA0354), a novel pseuodgene and a CpG island, complete sequence Length = 192336 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 gaaggaactcttcaccttca 371 |||||||||||||||||||| Sbjct: 190705 gaaggaactcttcaccttca 190686
>ref|XM_847794.1| PREDICTED: Canis familiaris similar to lamina-associated polypeptide 1B (LOC610317), mRNA Length = 2233 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 80 cgagcagcagtcagcagcaagatg 103 ||||||||||| |||||||||||| Sbjct: 1586 cgagcagcagtgagcagcaagatg 1563
>gb|AY232199.1| Drosophila yakuba clone yak-ad_Trip1 mRNA sequence Length = 533 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 149 aagtacaaccgggacggcgacctactgttctcatgcgccaagga 192 ||||||||||| || |||||||| || ||||| ||| ||||||| Sbjct: 49 aagtacaaccgcgagggcgacctgctcttctcctgctccaagga 92
>gb|BC007054.1| Homo sapiens TBC1 domain family, member 7, mRNA (cDNA clone MGC:12476 IMAGE:3828592), complete cds Length = 1156 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 ccggcggcggcgtcagcggcagcg 78 |||||||||||| ||||||||||| Sbjct: 11 ccggcggcggcggcagcggcagcg 34
>emb|AL589984.7| Human DNA sequence from clone RP1-49A18 on chromosome 6 Contains a novel gene (HSPC239), the 3' end of a novel gene (FLJ20330, FLJ30569, FLJ23357) and two CpG islands, complete sequence Length = 84388 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 ccggcggcggcgtcagcggcagcg 78 |||||||||||| ||||||||||| Sbjct: 25497 ccggcggcggcggcagcggcagcg 25474
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cggcggcgtcagcggcagcg 78 |||||||||||||||||||| Sbjct: 4152235 cggcggcgtcagcggcagcg 4152216
>emb|AL355802.13| Human DNA sequence from clone RP3-337H4 on chromosome 6 Contains the 3' part of a novel gene, three novel genes, the gene for RNA polymerase I 40 kDa subunit (RPA40) (RPA39), the gene for exportin 5 (KIAA1291) (XPO5), a 40S ribosomal protein S2 (RPS2) pseudogene, the 5' part of the POLH gene for DNA directed polymerase eta and four CpG islands, complete sequence Length = 105935 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 22916 cggcggcggcggcagcggcagcga 22939
>emb|AL158156.7| Human DNA sequence from clone RP11-405L18 on chromosome 9 Contains the 5' end of a novel gene ( KIAA0354), a novel pseudogene, the gene for RNA polymerase I associated factor 53 (FLJ13390, FLJ13970)(PAF53), a novel gene, a ribosomal protein L21 (RPL21) pseudogene and a CpG island, complete sequence Length = 42353 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 gaaggaactcttcaccttca 371 |||||||||||||||||||| Sbjct: 369 gaaggaactcttcaccttca 350
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16 Length = 347137 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 ccggcggcggcgtcagcggcagcg 78 |||||||||| ||||||||||||| Sbjct: 337898 ccggcggcggggtcagcggcagcg 337875
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 55 ccggcggcggcgtcagcggcagcg 78 |||||||||| ||||||||||||| Sbjct: 200283 ccggcggcggggtcagcggcagcg 200260
>emb|AL663013.4|OSJN00214 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089K06, complete sequence Length = 129608 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 cggcggcgtcagcggcagcgacga 82 ||||||||||| |||||||||||| Sbjct: 94652 cggcggcgtcatcggcagcgacga 94629
>emb|AL833474.1|HSM804787 Homo sapiens mRNA; cDNA DKFZp686N2317 (from clone DKFZp686N2317) Length = 2636 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 ccggcggcggcgtcagcggcagcg 78 |||||||||||| ||||||||||| Sbjct: 23 ccggcggcggcggcagcggcagcg 46
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ccggcggcggcgtcagcggc 74 |||||||||||||||||||| Sbjct: 108937 ccggcggcggcgtcagcggc 108918
>gb|AY118527.1| Drosophila melanogaster LD24026 full insert cDNA Length = 1174 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 149 aagtacaaccgggacggcgacctactgttctcatgcgccaagga 192 ||||||||||| || |||||||| || ||||| ||| ||||||| Sbjct: 110 aagtacaaccgcgagggcgacctgctcttctcctgctccaagga 153
>emb|CR626442.1| full-length cDNA clone CS0DF029YJ02 of Fetal brain of Homo sapiens (human) Length = 1659 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 114 cggcggcggcggcagcggcagcga 91
>dbj|AK057228.1| Homo sapiens cDNA FLJ32666 fis, clone TESTI1000096 Length = 2312 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 ccggcggcggcgtcagcggcagcg 78 |||||||||||| ||||||||||| Sbjct: 11 ccggcggcggcggcagcggcagcg 34
>ref|NM_078754.2| Drosophila melanogaster Trip1 CG8882-RA (Trip1), mRNA Length = 1285 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 149 aagtacaaccgggacggcgacctactgttctcatgcgccaagga 192 ||||||||||| || |||||||| || ||||| ||| ||||||| Sbjct: 134 aagtacaaccgcgagggcgacctgctcttctcctgctccaagga 177
>dbj|AK157327.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830211F17 product:autocrine motility factor receptor, full insert sequence Length = 3469 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 gcggcggcgtcagcggcagcgacg 81 ||||||||| |||||||||||||| Sbjct: 60 gcggcggcggcagcggcagcgacg 83
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cggcggcgtcagcggcagcg 78 |||||||||||||||||||| Sbjct: 4521056 cggcggcgtcagcggcagcg 4521037
>gb|AY771780.1| Simian adenovirus 1 strain ATCC VR-195, complete genome Length = 34450 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 51 cctcccggcggcggcgtcagcggcagcg 78 ||||||||||||||||| ||||||||| Sbjct: 15068 cctcccggcggcggcgttggcggcagcg 15041
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 cggcggcgtcagcggcagcgacga 82 ||||||||||| |||||||||||| Sbjct: 4704519 cggcggcgtcatcggcagcgacga 4704496
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cggcggcgtcagcggcagcg 78 |||||||||||||||||||| Sbjct: 14643606 cggcggcgtcagcggcagcg 14643625
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 |||||||| ||||||||||||||| Sbjct: 16495772 cggcggcgccgtcagcggcagcga 16495749
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 23256622 cggcggcggcggcagcggcagcga 23256599
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 172101 cggcggcggcggcagcggcagcga 172124
>gb|AC008233.3|AC008233 Drosophila melanogaster, chromosome 2L, region 25C-25C, BAC clone BACR13M11, complete sequence Length = 162387 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 149 aagtacaaccgggacggcgacctactgttctcatgcgccaagga 192 ||||||||||| || |||||||| || ||||| ||| ||||||| Sbjct: 23771 aagtacaaccgcgagggcgacctgctcttctcctgctccaagga 23728
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cggcggcgtcagcggcagcg 78 |||||||||||||||||||| Sbjct: 406038 cggcggcgtcagcggcagcg 406019
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 ggtcatcaccaccgacagct 443 |||||||||||||||||||| Sbjct: 875647 ggtcatcaccaccgacagct 875666
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 169903 cggcggcggcggcagcggcagcga 169926
>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436E04 Length = 144644 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 13771 cggcggcggcggcagcggcagcga 13794
>dbj|AP005384.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_D02 Length = 112773 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 15768 cggcggcggcggcagcggcagcga 15745
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cggcggcgtcagcggcagcg 78 |||||||||||||||||||| Sbjct: 65273 cggcggcgtcagcggcagcg 65292
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 113853 cggcggcggcggcagcggcagcga 113830
>dbj|AK108287.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-D09, full insert sequence Length = 1018 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 44 cggcggcggcggcagcggcagcga 21
>dbj|AK107000.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-C03, full insert sequence Length = 2620 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cggcggcgtcagcggcagcg 78 |||||||||||||||||||| Sbjct: 590 cggcggcgtcagcggcagcg 571
>dbj|AK072807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140E08, full insert sequence Length = 2409 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 39 cggcggcggcggcagcggcagcga 16
>dbj|AK068676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158I15, full insert sequence Length = 845 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 512 cggcggcggcggcagcggcagcga 535
>dbj|AK066123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055A22, full insert sequence Length = 2498 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 517 cggcggcggcggcagcggcagcga 540
>dbj|AK065194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E13, full insert sequence Length = 4021 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cggcggcgtcagcggcagcg 78 |||||||||||||||||||| Sbjct: 719 cggcggcgtcagcggcagcg 700
>gb|AF124144.1|AF124144 Mus musculus autocrine motility factor receptor (Amfr) mRNA, complete cds Length = 3548 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 gcggcggcgtcagcggcagcgacg 81 ||||||||| |||||||||||||| Sbjct: 262 gcggcggcggcagcggcagcgacg 285
>gb|AE003608.5| Drosophila melanogaster chromosome 2L, section 17 of 83 of the complete sequence Length = 174887 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Minus Query: 149 aagtacaaccgggacggcgacctactgttctcatgcgccaagga 192 ||||||||||| || |||||||| || ||||| ||| ||||||| Sbjct: 26044 aagtacaaccgcgagggcgacctgctcttctcctgctccaagga 26001
>ref|NM_001012974.1| Homo sapiens chromosome 6 open reading frame 154 (C6orf154), mRNA Length = 2121 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 528 cggcggcggcggcagcggcagcga 505
>ref|NM_011787.1| Mus musculus autocrine motility factor receptor (Amfr), mRNA Length = 3548 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 gcggcggcgtcagcggcagcgacg 81 ||||||||| |||||||||||||| Sbjct: 262 gcggcggcggcagcggcagcgacg 285
>gb|BC108661.1| Homo sapiens chromosome 6 open reading frame 154, mRNA (cDNA clone MGC:131686 IMAGE:5240367), complete cds Length = 1805 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 185 cggcggcggcggcagcggcagcga 162
>gb|U90930.1|DMU90930 Drosophila melanogaster TRIP-1 homolog (DmTRIP) mRNA, complete cds Length = 1166 Score = 40.1 bits (20), Expect = 6.0 Identities = 38/44 (86%) Strand = Plus / Plus Query: 149 aagtacaaccgggacggcgacctactgttctcatgcgccaagga 192 ||||||||||| || |||||||| || ||||| ||| ||||||| Sbjct: 106 aagtacaaccgcgagggcgacctgctcttctcctgctccaagga 149
>gb|AY839756.1| Ovine herpesvirus 2 strain BJ1035, complete genome Length = 135135 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gcggcggcgtcagcggcagc 77 |||||||||||||||||||| Sbjct: 134900 gcggcggcgtcagcggcagc 134881
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 cggcggcggcgtcagcggcagcga 79 ||||||||||| |||||||||||| Sbjct: 120647 cggcggcggcggcagcggcagcga 120670 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,736,176 Number of Sequences: 3902068 Number of extensions: 2736176 Number of successful extensions: 59172 Number of sequences better than 10.0: 117 Number of HSP's better than 10.0 without gapping: 119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 57903 Number of HSP's gapped (non-prelim): 1253 length of query: 447 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 425 effective length of database: 17,147,199,772 effective search space: 7287559903100 effective search space used: 7287559903100 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
