ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet98c01 |
|---|---|
| Clone Library Name | barley_pub |
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 122 bits (306), Expect = 4e-28 Identities = 64/114 (56%), Positives = 78/114 (68%) Frame = +1 Query: 85 MAALAPTKMLGTRLDFAGSSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAG 264 MA+L ++MLGT L+F SR ++AP A + F+ V+ +S Sbjct: 1 MASLGVSEMLGTPLNFRAVSR--SSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETS-- 56 Query: 265 IDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFA 426 DELAKWYGPDRRI+LP+GLLDRSE+PEYLNGEV GDYGYDPFGLGKKPE+FA Sbjct: 57 --DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFA 108
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 59.3 bits (142), Expect = 4e-09 Identities = 37/97 (38%), Positives = 43/97 (44%) Frame = +1 Query: 151 ATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLPNGLL 330 A+ A TA + +V VA SA WYGPDR YL Sbjct: 2 ASMAATASSTTVVKATPFLGQTKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPF-- 59 Query: 331 DRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 ++ P YLNGE PGDYG+D GL PE FA R L Sbjct: 60 -SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRAL 95
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 58.2 bits (139), Expect = 9e-09 Identities = 30/52 (57%), Positives = 32/52 (61%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR +YL G L E P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 58.2 bits (139), Expect = 9e-09 Identities = 30/52 (57%), Positives = 32/52 (61%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR +YL G L E P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGPDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 57.4 bits (137), Expect = 2e-08 Identities = 28/52 (53%), Positives = 31/52 (59%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR +YL E P YL GE PGDYG+D GL PE+FA R L Sbjct: 58 WYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNREL 106
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 57.0 bits (136), Expect = 2e-08 Identities = 31/62 (50%), Positives = 35/62 (56%) Frame = +1 Query: 256 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTR 435 +A ID + WYGPDR +YL E P YL GE PGDYG+D GL PE FA R Sbjct: 55 AASID---SPWYGPDRVLYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 108 Query: 436 PL 441 L Sbjct: 109 EL 110
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 56.6 bits (135), Expect = 3e-08 Identities = 31/62 (50%), Positives = 35/62 (56%) Frame = +1 Query: 256 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTR 435 +A ID + WYGPDR +YL E P YL GE PGDYG+D GL PE FA R Sbjct: 55 AASID---SPWYGPDRVMYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 108 Query: 436 PL 441 L Sbjct: 109 EL 110
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 56.2 bits (134), Expect = 4e-08 Identities = 28/52 (53%), Positives = 31/52 (59%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL ++ P YLNGE PGDYG+D GL PE FA R L Sbjct: 50 WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRAL 98
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 55.8 bits (133), Expect = 5e-08 Identities = 27/52 (51%), Positives = 30/52 (57%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL ++P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGPDRPKYLGPF---SDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 55.8 bits (133), Expect = 5e-08 Identities = 31/64 (48%), Positives = 34/64 (53%) Frame = +1 Query: 250 TSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAS 429 T A + D + WYGPDR YL E P YL GE PGDYG+D GL PE FA Sbjct: 38 TVKAPVSD--SPWYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAK 92 Query: 430 TRPL 441 R L Sbjct: 93 NREL 96
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 55.5 bits (132), Expect = 6e-08 Identities = 27/52 (51%), Positives = 30/52 (57%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL ++P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGPDRPKYLGPF---SEQIPSYLTGEFPGDYGWDTAGLSADPETFARNREL 97
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 55.5 bits (132), Expect = 6e-08 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 98
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 55.5 bits (132), Expect = 6e-08 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 99
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 55.5 bits (132), Expect = 6e-08 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 99
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 55.1 bits (131), Expect = 8e-08 Identities = 29/52 (55%), Positives = 31/52 (59%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR +YL G L E P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 55.1 bits (131), Expect = 8e-08 Identities = 29/52 (55%), Positives = 31/52 (59%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR +YL G L E P YL GE PGDYG+D GL PE FA R L Sbjct: 50 WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 98
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 55.1 bits (131), Expect = 8e-08 Identities = 38/101 (37%), Positives = 44/101 (43%) Frame = +1 Query: 139 SSRYATAAPTAGAQKIVSLFDRFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLP 318 +S A ++P AG K V L + S A + WYGPDR YL Sbjct: 3 ASTTALSSPFAG--KAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60 Query: 319 NGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 E P YL GE PGDYG+D GL PE FA R L Sbjct: 61 PF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 98
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 55.1 bits (131), Expect = 8e-08 Identities = 29/52 (55%), Positives = 31/52 (59%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR +YL G L E P YL GE PGDYG+D GL PE FA R L Sbjct: 45 WYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 93
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 97
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 50 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 98
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 46 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 94
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 39 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 87
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 99
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 99
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 99
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 51 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 99
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 48 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 54.7 bits (130), Expect = 1e-07 Identities = 27/52 (51%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL + P YL GE PGDYG+D GL PE FA R L Sbjct: 48 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 29 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 77
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/52 (53%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 47 WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 95
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 54.3 bits (129), Expect = 1e-07 Identities = 27/52 (51%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL + P YL GE PGDYG+D GL PE FA R L Sbjct: 47 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNREL 95
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 53.9 bits (128), Expect = 2e-07 Identities = 25/53 (47%), Positives = 33/53 (62%) Frame = +1 Query: 283 KWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 ++YGPDR +L G ++ PEYL GE PGDYG+D GL P+ FA R + Sbjct: 32 EFYGPDRAKFL--GPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREI 82
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 53.9 bits (128), Expect = 2e-07 Identities = 29/52 (55%), Positives = 31/52 (59%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR +YL G L S P YL GE PGDYG+D GL PE FA R L Sbjct: 48 WYGADRVLYL--GPLSGSP-PSYLTGEFPGDYGWDTEGLSADPETFAKNREL 96
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 53.5 bits (127), Expect = 2e-07 Identities = 28/52 (53%), Positives = 31/52 (59%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR +YL G S P YL+GE PGDYG+D GL PE FA R L Sbjct: 49 WYGSDRPLYL--GPFSGSP-PSYLSGEFPGDYGWDTAGLSADPETFAKNREL 97
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 53.5 bits (127), Expect = 2e-07 Identities = 27/52 (51%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE F+ R L Sbjct: 52 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNREL 100
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 53.5 bits (127), Expect = 2e-07 Identities = 27/52 (51%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL PE F+ R L Sbjct: 53 WYGPDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFSKNREL 101
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 53.1 bits (126), Expect = 3e-07 Identities = 27/52 (51%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D GL P FA R L Sbjct: 50 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKL 98
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 53.1 bits (126), Expect = 3e-07 Identities = 27/52 (51%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE P DYG+D GL PE FA R L Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNREL 99
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 52.8 bits (125), Expect = 4e-07 Identities = 27/52 (51%), Positives = 29/52 (55%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGP+R YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 51 WYGPNRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 99
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 52.4 bits (124), Expect = 5e-07 Identities = 27/52 (51%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE PGDYG+D L PE FA R L Sbjct: 51 WYGPDRVKYLGPF---SGEAPSYLTGEFPGDYGWDTAELSADPETFAKNREL 99
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/52 (50%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR YL + P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNREL 97
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/52 (50%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR YL + P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNREL 97
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/52 (50%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR YL + P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNREL 97
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 51.2 bits (121), Expect = 1e-06 Identities = 27/52 (51%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 49 WYGSDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFARNREL 97
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 51.2 bits (121), Expect = 1e-06 Identities = 29/62 (46%), Positives = 33/62 (53%) Frame = +1 Query: 256 SAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTR 435 SAGI+ WYGPDR +L + P YL GE PGDYG+D GL PE F R Sbjct: 34 SAGIE-----WYGPDRAKWLGPF---STNTPAYLTGEFPGDYGWDTAGLSADPETFKKYR 85 Query: 436 PL 441 L Sbjct: 86 EL 87
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 51.2 bits (121), Expect = 1e-06 Identities = 27/52 (51%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNREL 98
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 51.2 bits (121), Expect = 1e-06 Identities = 27/52 (51%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 50 WYGSDRVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFARNREL 98
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/52 (50%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR YL + P YL GE PGDYG+D GL PE FA R L Sbjct: 21 WYGEDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFARNREL 69
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 51.2 bits (121), Expect = 1e-06 Identities = 30/64 (46%), Positives = 33/64 (51%) Frame = +1 Query: 250 TSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAS 429 + SAG D WYG DR +L E P YLNGE GDYG+D GL PE FA Sbjct: 43 SKSAGSD---TIWYGADRPKFLGPF---SGETPSYLNGEFAGDYGWDTAGLSSDPETFAR 96 Query: 430 TRPL 441 R L Sbjct: 97 NREL 100
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 50.4 bits (119), Expect = 2e-06 Identities = 26/52 (50%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL G P YL GE PGDYG+D + PE FA R L Sbjct: 50 WYGPDRPKYL--GPFSEG-TPSYLTGEFPGDYGWDTAAVSADPETFAKNREL 98
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 50.1 bits (118), Expect = 3e-06 Identities = 26/52 (50%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 W+GPD YL E P YL GE PGDYG+D GL PE FA R L Sbjct: 12 WHGPDGVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 60
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 50.1 bits (118), Expect = 3e-06 Identities = 25/52 (48%), Positives = 28/52 (53%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYG DR +L + P YL GE PGDYG+D GL PE FA R L Sbjct: 48 WYGADRPKFLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 96
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 48.5 bits (114), Expect = 8e-06 Identities = 27/65 (41%), Positives = 35/65 (53%) Frame = +1 Query: 247 ATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFA 426 A S+G++ +YGP+R +L G + P YL GE PGDYG+D GL PE F Sbjct: 28 APKSSGVE-----FYGPNRAKWL--GPYSENATPAYLTGEFPGDYGWDTAGLSADPETFK 80 Query: 427 STRPL 441 R L Sbjct: 81 RYREL 85
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 46.6 bits (109), Expect = 3e-05 Identities = 20/41 (48%), Positives = 27/41 (65%) Frame = +1 Query: 295 PDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 417 PDR ++ P S PE+L+G +PGD+G+DP GLG PE Sbjct: 63 PDRPLWFPG-----STPPEWLDGSLPGDFGFDPLGLGSDPE 98
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 45.1 bits (105), Expect = 8e-05 Identities = 22/46 (47%), Positives = 29/46 (63%) Frame = +1 Query: 280 AKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 417 AK DR ++ P ++ PEYL+G + GDYG+DPFGLGK E Sbjct: 45 AKTVISDRPLWFPG-----AKSPEYLDGSLVGDYGFDPFGLGKPAE 85
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 45.1 bits (105), Expect = 8e-05 Identities = 20/34 (58%), Positives = 21/34 (61%) Frame = +1 Query: 340 EVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 E P YL GE PGDYG+D GL PE FA R L Sbjct: 5 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNREL 38
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 44.3 bits (103), Expect = 1e-04 Identities = 20/34 (58%), Positives = 21/34 (61%) Frame = +1 Query: 340 EVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 E P YL GE PGDYG+D GL PE FA R L Sbjct: 68 EWPSYLTGEFPGDYGWDTAGLSAYPETFAKNREL 101
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 43.5 bits (101), Expect = 2e-04 Identities = 16/23 (69%), Positives = 20/23 (86%) Frame = +1 Query: 346 PEYLNGEVPGDYGYDPFGLGKKP 414 PE+L+G +PGDYG+DP GLGK P Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDP 90
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 42.0 bits (97), Expect = 7e-04 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +1 Query: 295 PDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 417 PDR ++ P S P +L+G +PGD+G+DP GL PE Sbjct: 63 PDRPLWFPG-----STPPPWLDGSLPGDFGFDPLGLASDPE 98
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 42.0 bits (97), Expect = 7e-04 Identities = 15/23 (65%), Positives = 20/23 (86%) Frame = +1 Query: 346 PEYLNGEVPGDYGYDPFGLGKKP 414 PE+L+G +PGD+G+DP GLGK P Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDP 90
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 42.0 bits (97), Expect = 7e-04 Identities = 15/23 (65%), Positives = 20/23 (86%) Frame = +1 Query: 346 PEYLNGEVPGDYGYDPFGLGKKP 414 PE+L+G +PGD+G+DP GLGK P Sbjct: 73 PEWLDGSLPGDFGFDPLGLGKDP 95
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 41.2 bits (95), Expect = 0.001 Identities = 18/40 (45%), Positives = 26/40 (65%) Frame = +1 Query: 298 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 417 DR ++ P + P++L+G + GDYG+DPFGLGK E Sbjct: 54 DRPLWYPGAIS-----PDWLDGSLVGDYGFDPFGLGKPAE 88
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 38.9 bits (89), Expect = 0.006 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +1 Query: 298 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 417 DR ++ P + PE+L+G + GD G+DPFGLGK E Sbjct: 55 DRLVWFPG-----ANPPEWLDGSMIGDRGFDPFGLGKPAE 89
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 37.7 bits (86), Expect = 0.013 Identities = 21/53 (39%), Positives = 27/53 (50%) Frame = +1 Query: 283 KWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 ++YGPD +G + + P GE PGDYG+D GL PE F R L Sbjct: 56 QFYGPDAT----SGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYREL 104
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 37.4 bits (85), Expect = 0.017 Identities = 17/37 (45%), Positives = 24/37 (64%) Frame = +1 Query: 307 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPE 417 ++LPN + PE+L+G +PGD G+DP GL K E Sbjct: 51 LWLPN-----TTRPEWLDGSLPGDRGFDPLGLSKPSE 82
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 36.6 bits (83), Expect = 0.030 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = +1 Query: 307 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTR 435 ++ PN L P +LNGE GD G+DP GL P+ F R Sbjct: 4 LWFPNTL-----APSWLNGEYYGDRGFDPAGLAADPDTFERMR 41 Score = 34.3 bits (77), Expect = 0.15 Identities = 17/42 (40%), Positives = 22/42 (52%) Frame = +1 Query: 298 DRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDF 423 +R ++ PN + P YL GE GD G+DP GL P F Sbjct: 370 ERELWFPNIV-----PPRYLTGEAYGDKGFDPAGLAADPVTF 406 Score = 33.5 bits (75), Expect = 0.25 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = +1 Query: 307 IYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTR 435 ++ PN +E P L GE P D G+DP L P+ +A R Sbjct: 189 LWFPN-----AEPPALLTGEYPADRGFDPLNLAADPDVYARMR 226
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 36.6 bits (83), Expect = 0.030 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +1 Query: 346 PEYLNGEVPGDYGYDPFGLGKKP 414 P YL+G PGD+G+D GLG+ P Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVP 78
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 36.2 bits (82), Expect = 0.039 Identities = 23/73 (31%), Positives = 32/73 (43%) Frame = +1 Query: 202 RFNXXXXXXXXXXXVATSSAGIDDELAKWYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDY 381 R N TSS ++ + +W LP GL P+YL G + GD Sbjct: 29 RLNRDLSFTSIGSSAKTSSFKVEAKKGEW--------LP-GLAS----PDYLTGSLAGDN 75 Query: 382 GYDPFGLGKKPED 420 G+DP GL + PE+ Sbjct: 76 GFDPLGLAEDPEN 88
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 33.5 bits (75), Expect = 0.25 Identities = 22/52 (42%), Positives = 22/52 (42%) Frame = +1 Query: 286 WYGPDRRIYLPNGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTRPL 441 WYGPDR YL E P YL GE GL PE FA R L Sbjct: 48 WYGPDRVKYLGP---FSGEAPSYLTGEF--------HGLSADPETFAKNREL 88
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 32.7 bits (73), Expect = 0.43 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +1 Query: 352 YLNGEVPGDYGYDPFGL 402 YL+G +PGD+G+DP GL Sbjct: 65 YLDGRLPGDFGFDPLGL 81
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 30.8 bits (68), Expect = 1.6 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +1 Query: 337 SEVPEYLNGEVPGDYGYDPFGLGKKPEDFASTR 435 ++ P +L GE P D G+DP + P +A R Sbjct: 166 AQPPAHLTGEYPADRGFDPLSVAADPTVYARMR 198
>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1| (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod Na-Ca+K exchanger) Length = 1181 Score = 30.4 bits (67), Expect = 2.1 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +2 Query: 275 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATILLVWARSQRTS 424 +SP+ T G P+ + R TST + ETTAT ++ RS+RT+ Sbjct: 177 SSPTHTREEGRMHTPSPAGAPRTISPTSTEKDSETTATYRMLEPRSERTA 226
>NLPD_SALTY (P40827) Lipoprotein nlpD precursor| Length = 377 Score = 30.0 bits (66), Expect = 2.8 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 275 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 364 N P+GT +T T PT S T STST+ Sbjct: 223 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 252
>NLPD_SALDU (P39700) Lipoprotein nlpD precursor| Length = 377 Score = 30.0 bits (66), Expect = 2.8 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 275 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 364 N P+GT +T T PT S T STST+ Sbjct: 223 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 252
>UBIE_PORGI (Q7MVR7) Menaquinone biosynthesis methyltransferase ubiE (EC| 2.1.1.-) Length = 245 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = -3 Query: 387 VAVVSGNLAVEVLRHLRPVKEAVGQVDPPVRAVPLGE 277 VA +G+LA+E+ RH+ VK+ G VD + + +GE Sbjct: 65 VATGTGDLAIEICRHIPSVKQVTG-VDLSLEMMRIGE 100
>NLPD_SALTI (Q56131) Lipoprotein nlpD precursor| Length = 373 Score = 30.0 bits (66), Expect = 2.8 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 275 NSPSGTALTGGSTCPTASLTGRRCRSTSTA 364 N P+GT +T T PT S T STST+ Sbjct: 219 NKPAGTVVTAPVTAPTVSTTEPNASSTSTS 248
>INLA_LISMF (Q723K6) Internalin A precursor| Length = 800 Score = 29.3 bits (64), Expect = 4.7 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +2 Query: 275 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATI 391 N+P T G +T P+A++ G +TST TT+T+ Sbjct: 716 NTPPTTNNGGNTTPPSANIPGSNTSNTSTGNSASTTSTM 754
>PTW3C_BACSU (P39816) Putative PTS system glucosamine-specific EIICBA component| [Includes: Glucosamine permease IIC component (PTS system glucosamine-specific EIIC component); Glucosamine-specific phosphotransferase enzyme IIB component (EC 2.7.1.69) (PTS Length = 631 Score = 28.9 bits (63), Expect = 6.2 Identities = 10/31 (32%), Positives = 17/31 (54%) Frame = -1 Query: 185 IFCAPAVGAAVAYLEEPAKSSRVPSILVGAS 93 IFC PAV A+ + P K + +++ A+ Sbjct: 252 IFCLPAVALAIIHTARPEKKKMISGVMISAA 282
>INLA_LISMO (P25146) Internalin A precursor| Length = 800 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +2 Query: 275 NSPSGTALTGGSTCPTASLTGRRCRSTSTARFPETTATI 391 N+P T G +T P+A++ G +TST TT+T+ Sbjct: 716 NTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTM 754 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.134 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,866,978 Number of Sequences: 219361 Number of extensions: 855539 Number of successful extensions: 2223 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 2124 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2182 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
