ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet98b11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CD6_HUMAN (P30203) T-cell differentiation antigen CD6 precursor ... 30 2.1

>CD6_HUMAN (P30203) T-cell differentiation antigen CD6 precursor (T12) (TP120)|
          Length = 668

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 17/32 (53%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -2

Query: 156 VEHRA-GDRRPAAVPARELREQRLVDAGGACS 64
           VEH    D R A V   E R  RLVD GGAC+
Sbjct: 140 VEHACRSDGRRARVTCAENRALRLVDGGGACA 171


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.131    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,920,070
Number of Sequences: 219361
Number of extensions: 138203
Number of successful extensions: 495
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 80,573,946
effective HSP length: 60
effective length of database: 67,412,286
effective search space used: 1617894864
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
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