>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                          
Query: 110     gggccgtggtcctccgcctcgacgacctgtcccttccgtcgcg 152
               |||| ||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 4201257 gggcggtggtgctccgcctcgacgacctctcccttccgccgcg 4201215



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 79      ccagccatggcgcccgccgc 98
               ||||||||||||||||||||
Sbjct: 8431607 ccagccatggcgcccgccgc 8431588

>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0554A06
          Length = 165311

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 110   gggccgtggtcctccgcctcgacgacctgtcccttccgtcgcg 152
             |||| ||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 46478 gggcggtggtgctccgcctcgacgacctctcccttccgccgcg 46436

>dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBb0036B04
          Length = 136159

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 110    gggccgtggtcctccgcctcgacgacctgtcccttccgtcgcg 152
              |||| ||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 134516 gggcggtggtgctccgcctcgacgacctctcccttccgccgcg 134474

>dbj|AK109370.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D12, full
           insert sequence
          Length = 1403

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 110 gggccgtggtcctccgcctcgacgacctgtcccttccgtcgcg 152
           |||| ||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 124 gggcggtggtgctccgcctcgacgacctctcccttccgccgcg 166

>dbj|AK102112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033084G03, full
           insert sequence
          Length = 1473

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 110 gggccgtggtcctccgcctcgacgacctgtcccttccgtcgcg 152
           |||| ||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 119 gggcggtggtgctccgcctcgacgacctctcccttccgccgcg 161

>gb|U23466.1|HHU23466 Human herpesvirus 6 gp105 gene, exon 3, partial cds
          Length = 2109

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 52  aaccctagctctagccctagcc 73
           ||||||||||||||||||||||
Sbjct: 343 aaccctagctctagccctagcc 322



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 52  aaccctagctctagccctagcc 73
           ||||||||||||||||||||||
Sbjct: 133 aaccctagctctagccctagcc 112

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 90      gcccgccgccggcgcgacccgggccgtgg 118
               ||||||||||||||||  |||||||||||
Sbjct: 3020114 gcccgccgccggcgcgggccgggccgtgg 3020086



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     ggcgcccgccgccggcgcga 106
              ||||||||||||||||||||
Sbjct: 461765 ggcgcccgccgccggcgcga 461784

>ref|XM_310498.2| Anopheles gambiae str. PEST ENSANGP00000007356 (ENSANGG00000005550),
            partial mRNA
          Length = 4149

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 95   ccgccggcgcgacccgggccgtggt 119
            |||||||| ||||||||||||||||
Sbjct: 3710 ccgccggcacgacccgggccgtggt 3734

>gb|BT018817.1| Zea mays clone EL01N0531H05.d mRNA sequence
          Length = 1344

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 110 gggccgtggtcctccgcctcgacgacctgtcccttccgtcgcggtacctcaccgtc 165
           ||||||| || |||||||| ||||||||| | || ||  ||||| |||||||||||
Sbjct: 110 gggccgtcgtgctccgcctggacgacctggcgctgcccccgcggcacctcaccgtc 165

>gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence
          Length = 103167

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    gccatggcgcccgccgccggcgcg 105
             ||||| ||||||||||||||||||
Sbjct: 48030 gccatcgcgcccgccgccggcgcg 48053

>ref|XM_953091.1| Neurospora crassa OR74A hypothetical protein (NCU07409.1) partial
           mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 tacctcaccaccgacggccg 245
           ||||||||||||||||||||
Sbjct: 439 tacctcaccaccgacggccg 458

>ref|XM_327694.1| Neurospora crassa OR74A hypothetical protein (NCU07409.1) partial
           mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 tacctcaccaccgacggccg 245
           ||||||||||||||||||||
Sbjct: 439 tacctcaccaccgacggccg 458

>gb|AC162936.3| Mus musculus BAC clone RP23-108K5 from chromosome 14, complete sequence
          Length = 236917

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    ccctagctctagccctagcc 73
             ||||||||||||||||||||
Sbjct: 55043 ccctagctctagccctagcc 55024

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 224     tctacctcaccaccgacggc 243
               ||||||||||||||||||||
Sbjct: 4581977 tctacctcaccaccgacggc 4581996

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 92      ccgccgccggcgcgacccgggccg 115
               |||||||||||||| |||||||||
Sbjct: 3612451 ccgccgccggcgcgccccgggccg 3612428

>gb|AE012435.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 343
            of 460 of the complete genome
          Length = 11282

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 77   caccagccatggcgcccgcc 96
            ||||||||||||||||||||
Sbjct: 4207 caccagccatggcgcccgcc 4188

>gb|AC160639.2| Mus musculus BAC clone RP23-103I12 from chromosome 14, complete
             sequence
          Length = 195224

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 54    ccctagctctagccctagcc 73
             ||||||||||||||||||||
Sbjct: 68276 ccctagctctagccctagcc 68295

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 77      caccagccatggcgcccgcc 96
               ||||||||||||||||||||
Sbjct: 1178106 caccagccatggcgcccgcc 1178125

>dbj|AP004740.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0092H22
          Length = 165194

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    ccagccatggcgcccgccgc 98
             ||||||||||||||||||||
Sbjct: 46308 ccagccatggcgcccgccgc 46289


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,017,738
Number of Sequences: 3902068
Number of extensions: 1017738
Number of successful extensions: 26753
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26240
Number of HSP's gapped (non-prelim): 513
length of query: 329
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 307
effective length of database: 17,147,199,772
effective search space: 5264190330004
effective search space used: 5264190330004
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)