>PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 258

 Score =  158 bits (400), Expect = 3e-39
 Identities = 81/118 (68%), Positives = 81/118 (68%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 225
           MASTSCFLHQST            VGRTQLFVCKA KNDEAASDAAVVTSRR        
Sbjct: 1   MASTSCFLHQSTARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSLLAG 60

Query: 226 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKEREFPEQ 399
                         YGEAANVFGKAKKNTDFVAYSGEGF LMIPAKWNPSKEREFP Q
Sbjct: 61  AAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQ 118

>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein) (OEC23)
          Length = 263

 Score =  101 bits (251), Expect = 5e-22
 Identities = 54/122 (44%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRT----QLFVCKAHKNDEAASDAAVVTSRRXXXX 213
           MASTSCFLH                       QL VC+A K   A  +   V SRR    
Sbjct: 1   MASTSCFLHHHALTAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALT 60

Query: 214 XXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKEREFP 393
                             YGEAANVFGK K NTD++ YSG+GF L IP+KWNPSKEREFP
Sbjct: 61  VLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFP 120

Query: 394 EQ 399
            Q
Sbjct: 121 GQ 122

>PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 259

 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 53/121 (43%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
 Frame = +1

Query: 46  MASTSCFLHQS---TXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXX 216
           MAST CFLH     T              +    VCKA K D+       V SRR     
Sbjct: 1   MASTQCFLHHQYAITTPTRTLSQRQVVTTKPNHIVCKAQKQDDVVD---AVVSRRLALSV 57

Query: 217 XXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKEREFPE 396
                            YGEAANVFGKAK NTD++ Y+G+GF L++PAKWNPSKEREFP 
Sbjct: 58  LIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPG 117

Query: 397 Q 399
           Q
Sbjct: 118 Q 118

>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane)
          Length = 268

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 53/127 (41%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDA--AVVTSR 198
           MAST CFLHQ                +  +        VC+A K      D   +VV SR
Sbjct: 1   MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSR 60

Query: 199 RXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSK 378
           R                      YGEAANVFGK K+NTDF+AY+G+GF L +PAKWNPSK
Sbjct: 61  RLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSK 120

Query: 379 EREFPEQ 399
           E EFP Q
Sbjct: 121 EVEFPGQ 127

>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 267

 Score = 94.7 bits (234), Expect = 5e-20
 Identities = 53/128 (41%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDAAVVTS--- 195
           MAST+CFLH                 R Q         VCKA K D+  ++A V+ S   
Sbjct: 1   MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDD--NEANVLNSGVS 58

Query: 196 RRXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPS 375
           RR                      YGEAANVFGK KKNT+F+ Y+G+GF L++P+KWNPS
Sbjct: 59  RRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPS 118

Query: 376 KEREFPEQ 399
           KE+EFP Q
Sbjct: 119 KEKEFPGQ 126

>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 258

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 52/118 (44%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
 Frame = +1

Query: 49  ASTSCFLHQ-STXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 225
           AST CFLHQ                 +    +C+A K D+A S+AAV  SRR        
Sbjct: 3   ASTQCFLHQYHALRSSPARTSSVSSPKPNQLICRAQKQDDA-SNAAV--SRRLALTLLIG 59

Query: 226 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKEREFPEQ 399
                         YGEAANVFGK K+NTDF+ Y+G+GF L +PAKWNPSKE E+P Q
Sbjct: 60  TAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQ 117

>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 260

 Score = 93.6 bits (231), Expect = 1e-19
 Identities = 51/118 (43%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = +1

Query: 49  ASTSCFLHQSTXXXXXXXXXXXXVG-RTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 225
           AST CFLHQ                 +    +C+A K D+A + +  V SRR        
Sbjct: 3   ASTQCFLHQYHALRSSPARTSSVPSPKPNQLICRAQKQDDANNTSNAV-SRRLALTLLIG 61

Query: 226 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKEREFPEQ 399
                         YGEAANVFGK K+NTDF+ Y+G+GF L IPAKWNPSKE EFP Q
Sbjct: 62  TAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQ 119

>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 264

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
 Frame = +1

Query: 46  MASTSCFLHQ------STXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXX 207
           MAS++CFL        +T            +  +QL +C+A K+ +   +++   SRR  
Sbjct: 1   MASSACFLLHHAPSTPATTSRTPSHRLVPTIKPSQL-ICRAQKSSDTDENSSTAVSRRLA 59

Query: 208 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKERE 387
                               YGEAANVFGKAK NTDF+ Y+G+GF L+IPAKWNPSKE E
Sbjct: 60  LTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVE 119

Query: 388 FPEQ 399
           FP Q
Sbjct: 120 FPGQ 123

>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 260

 Score = 90.5 bits (223), Expect = 9e-19
 Identities = 49/122 (40%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRTQL----FVCKAHKNDEAASDAAVVTSRRXXXX 213
           MA ++CFLHQS               +  +     VCKA +  E  +      SRR    
Sbjct: 1   MAYSACFLHQSALASSTARSSPSSSSQRYVSISKLVCKAQQTHEEDNSTV---SRRLALT 57

Query: 214 XXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKEREFP 393
                             YGEAANVFGK KKNTDF AYSG+GF + +PAKWNPS+E E+P
Sbjct: 58  LLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYP 117

Query: 394 EQ 399
            Q
Sbjct: 118 GQ 119

>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane protein)
          Length = 263

 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 47/125 (37%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDAAVVTSRRX 204
           MA ++CFLHQS               +  +        +CKA ++ E  + A    SRR 
Sbjct: 1   MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAV---SRRL 57

Query: 205 XXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKER 384
                                YGEAANVFGK K NTDF+ Y+G+GF + +PAKWNPSKE 
Sbjct: 58  ALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEI 117

Query: 385 EFPEQ 399
           E+P Q
Sbjct: 118 EYPGQ 122

>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane)
          Length = 265

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 49/124 (39%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRT----QLFVCKAHKNDEAASDA--AVVTSRRXX 207
           MAST CFLH               +  +    QL VC+A K      D   +V  SRR  
Sbjct: 1   MASTQCFLHHHALSTPARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLA 60

Query: 208 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKERE 387
                               YGEAANVFGK K +TDF  Y+G+GF L IP+KWNP+KE E
Sbjct: 61  LTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVE 120

Query: 388 FPEQ 399
           +P Q
Sbjct: 121 YPGQ 124

>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane)
          Length = 266

 Score = 84.7 bits (208), Expect = 5e-17
 Identities = 48/125 (38%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXV----GRTQLFVCKAHKNDEAASDA---AVVTSRRX 204
           MAST CFLH               +       QL VC+A     A       +V  SRR 
Sbjct: 1   MASTQCFLHHHALSTPARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRL 60

Query: 205 XXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKER 384
                                YGEAANVFGK K +TDF  Y+G+GF L IP+KWNP+KE 
Sbjct: 61  ALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEV 120

Query: 385 EFPEQ 399
           E+P Q
Sbjct: 121 EYPGQ 125

>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane protein)
          Length = 265

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 49/126 (38%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXX--------VGRTQLFVCKAHKNDEAASDAAVVTSRR 201
           MA +  FLHQS                     + R    VC+A ++ E  + A  V  R 
Sbjct: 1   MAYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSA--VFRRL 58

Query: 202 XXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKE 381
                                 YGEAANVFGK KKNTDF+ Y+GEGF + IP+KWNPSKE
Sbjct: 59  ALTLLVGAAAIGSKVSPAPXAAYGEAANVFGKPKKNTDFLPYTGEGFKIQIPSKWNPSKE 118

Query: 382 REFPEQ 399
            E+P Q
Sbjct: 119 IEYPGQ 124

>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 265

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
 Frame = +1

Query: 46  MASTSCFLHQ-----STXXXXXXXXXXXXVGRTQLFVCKAHKND-EAASDAAVVTSRRXX 207
           MAST+CFLH      +T              + Q    +    + + A++   + SRR  
Sbjct: 1   MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDALLSRRLA 60

Query: 208 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKERE 387
                               YGE+ANVFGK K NTDF   +G+GF ++IP+KWNPSKE E
Sbjct: 61  LTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVE 120

Query: 388 FPEQ 399
           FP Q
Sbjct: 121 FPGQ 124

>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein) (Fragment)
          Length = 217

 Score = 71.2 bits (173), Expect = 5e-13
 Identities = 34/75 (45%), Positives = 40/75 (53%)
 Frame = +1

Query: 175 DAAVVTSRRXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFILMI 354
           D     SRR                      YGEAANVFGK K NTDF A +G+GF + +
Sbjct: 2   DDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQV 61

Query: 355 PAKWNPSKEREFPEQ 399
           PAKWNPS+E E+P Q
Sbjct: 62  PAKWNPSREVEYPGQ 76

>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2)
          Length = 245

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +1

Query: 268 YGEAANVFGKAKKNTDFVAYSGEGFILMIPAKWNPSKEREFP 393
           YG++ANVFGK    + FV Y+G+GF L++PAKWNPSKE +FP
Sbjct: 59  YGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFP 100

>PSBP_EUGGR (P83687) Oxygen-evolving enhancer protein 2 (OEE2) (23 kDa subunit|
           of oxygen evolving system of photosystem II) (OEC 23 kDa
           subunit) (23 kDa thylakoid membrane protein) (Fragment)
          Length = 30

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +1

Query: 268 YGEAANVFGKAKKNTDFVAYSGEGF 342
           YGE ANVFGK K+   F   SG+G+
Sbjct: 2   YGEGANVFGKRKETDQFFEISGDGW 26

>TERT_HUMAN (O14746) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase|
           catalytic subunit) (HEST2) (Telomerase-associated
           protein 2) (TP2)
          Length = 1132

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
 Frame = -3

Query: 166 PRHSCAPCRRTAGCARR-----REQGAPR---QPGARWTGGGSRRWTPL 44
           P H+  P RR  GC R      RE G P     PGAR  GG + R  PL
Sbjct: 187 PPHASGP-RRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPL 234

>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 550

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -3

Query: 106 GAPRQPGARWTGGGSRR 56
           GAPR PG R  GGG+RR
Sbjct: 525 GAPRGPGGRPPGGGNRR 541

>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
            (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1745

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 66   PPPVHRA-PGCLGAPCSRRRAHPAVRLQG 149
            PP  H + PGCLGAP S   AH  +R +G
Sbjct: 963  PPTSHASQPGCLGAP-SAEAAHVGLRGEG 990

>RL3_ANASP (Q8YPH9) 50S ribosomal protein L3|
          Length = 211

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 78  HRAPGCLGAPCSRRRAHPAVRLQG 149
           HRAPG +GA  +  R +P  R+ G
Sbjct: 140 HRAPGSIGAGTTPGRVYPGKRMAG 163

>GATB_METTH (O27341) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 449

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 306 EHGLRGVQRRGVHTD-DPGQVEPQQG 380
           E  L GV+ R VH + DPGQ +P QG
Sbjct: 99  EGELNGVRIREVHIEEDPGQYKPDQG 124


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,929,604
Number of Sequences: 219361
Number of extensions: 589897
Number of successful extensions: 1832
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1818
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)