ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet98b03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507368.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1156 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 192 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 251 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 252 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 311 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 312 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 371 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 372 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 431 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 37 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 96 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 97 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 146
>ref|XM_478692.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1152 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 187 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 246 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 247 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 306 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 307 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 366 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 367 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 426 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 32 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 91 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 92 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 141
>ref|XM_507367.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1162 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 194 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 253 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 254 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 313 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 314 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 373 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 374 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 433 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 39 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 98 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 99 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 148
>ref|XM_507366.1| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1183 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 194 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 253 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 254 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 313 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 314 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 373 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 374 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 433 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 39 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 98 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 99 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 148
>ref|XM_506405.2| PREDICTED Oryza sativa (japonica cultivar-group), P0567H04.15 mRNA Length = 1221 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 208 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 267 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 268 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 327 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 328 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 387 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 388 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 447 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 53 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 112 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 113 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 162
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Minus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 22264149 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 22264090 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 22264089 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 22264030 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 22264029 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 22263970 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 22263969 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 22263910 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 22264304 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 22264245 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 22264244 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 22264195
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Minus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 69395 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 69336 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 69335 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 69276 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 69275 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 69216 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 69215 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 69156 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Minus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 69550 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 69491 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 69490 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 69441
>dbj|AK119534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B02, full insert sequence Length = 1234 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 194 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 253 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 254 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 313 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 314 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 373 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 374 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 433 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 39 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 98 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 99 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 148
>dbj|AK104619.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F11, full insert sequence Length = 1152 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 187 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 246 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 247 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 306 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 307 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 366 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 367 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 426 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 32 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 91 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 92 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 141
>dbj|AK104309.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D03, full insert sequence Length = 1169 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 201 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 260 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 261 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 320 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 321 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 380 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 381 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 440 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 46 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 105 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 106 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 155
>dbj|AK103924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C12, full insert sequence Length = 1183 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 194 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 253 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 254 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 313 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 314 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 373 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 374 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 433 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 39 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 98 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 99 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 148
>dbj|AK098992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098H13, full insert sequence Length = 1156 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 192 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 251 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 252 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 311 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 312 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 371 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 372 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 431 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 37 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 96 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 97 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 146
>dbj|AK058293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-F01, full insert sequence Length = 1221 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 208 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 267 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 268 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 327 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 328 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 387 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 388 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 447 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 53 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 112 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 113 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 162
>gb|AF058796.1|AF058796 Oryza sativa chlorophyll a/b-binding protein (RCABP69) mRNA, complete cds Length = 1178 Score = 230 bits (116), Expect = 3e-57 Identities = 209/240 (87%) Strand = Plus / Plus Query: 206 ccgaccaccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggc 265 ||||| || ||| ||||||||||||||| ||||||| |||||| || ||||| ||||| Sbjct: 192 ccgacgacggacaggccgctgtggttccccggcgcggtggcgccggactacctggacggg 251 Query: 266 acgctcgtcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctg 325 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 252 tcgctcgtcggcgactacggcttcgacccgttcggcctcgggaagccggcggagtacctg 311 Query: 326 cagtacgacgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatc 385 |||| ||| ||||||| |||||||||||||| ||| ||||| || || ||||||||| Sbjct: 312 cagttcgagctggactcgctggaccagaacctggccaagaacaacgccggcgagatcatc 371 Query: 386 ggcacccggttcgaggacgccgacgtcaagtccaccccgttccagccctacgcggaggtg 445 ||||||||||||||| || ||| || |||||||||||||||||||||||| | |||||| Sbjct: 372 ggcacccggttcgagaccggcgaggtgaagtccaccccgttccagccctacaccgaggtg 431 Score = 131 bits (66), Expect = 2e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 ||||||||||||| ||||||||||| || ||||||||||||||||| ||||| |||||| Sbjct: 37 gagcagccatggcgtcgtcggtggcagcggcggcgagcacgttcctggggacgaggctgg 96 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcggc 169 |||||||||||||||||| |||| | ||||||||| ||||||| |||||| Sbjct: 97 cggacccggcgccgcagagcgggaggatcgtggcgaggttcgggttcggc 146
>emb|Z50801.1|ZMCABCP29 Z.mays mRNA for chlorophyll a/b-binding protein CP29 Length = 1162 Score = 202 bits (102), Expect = 7e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 215 gaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggcacgctcgtc 274 ||||||||||||||||||| |||||| ||||||||| ||||| |||||| |||| ||| Sbjct: 170 gaccggccgctgtggttccccggcgccgtggcgcccgactacctggacggctcgctggtc 229 Query: 275 ggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctgcagtacgac 334 ||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||| ||| Sbjct: 230 ggcgactacgggttcgacccgttcggtctcgggaagcccgtggagtacctgcagttcgag 289 Query: 335 gtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatcggcacccgg 394 ||||||| |||||||||||||| ||| |||| ||| || | ||||||||||||||| Sbjct: 290 ttggactcgctggaccagaacctggccaagaatgaggccggcggcatcatcggcacccgg 349 Query: 395 ttcgaggacgccgacgtcaagtccaccccgttccagccctac 436 |||||| | |||| ||||||||||||||||| ||||||||| Sbjct: 350 ttcgagtcctccgaagtcaagtccaccccgttgcagccctac 391 Score = 145 bits (73), Expect = 1e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 64 agccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctggcgga 123 |||||||||||| ||||||||||||||||||||||| ||||| || ||||| |||||||| Sbjct: 7 agccatggcttcatcggtggccgccgcggcgagcacattcctgggcacccgcctggcgga 66 Query: 124 cccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcgg 168 ||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 67 cccggcgccacagaacgggcgcatcgtggcccggttcgggttcgg 111
>gb|AY103995.1| Zea mays PCO102677 mRNA sequence Length = 1225 Score = 188 bits (95), Expect = 1e-44 Identities = 192/223 (86%), Gaps = 1/223 (0%) Strand = Plus / Plus Query: 215 gaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggcacgctcgtc 274 ||||||||||||||||||| |||||| ||||||||| ||||| |||||| |||| ||| Sbjct: 214 gaccggccgctgtggttccccggcgccgtggcgcccgactacctggacggctcgctggtc 273 Query: 275 ggcgactacggcttcgaccccttcggcctcgggaagcccg-cggagtacctgcagtacga 333 ||||||||||| |||||||| ||||| ||||||||||||| |||||||||||||| ||| Sbjct: 274 ggcgactacgggttcgacccgttcggtctcgggaagcccgtgggagtacctgcagttcga 333 Query: 334 cgtggactccctggaccagaaccttgcccagaacctggcgggtgagatcatcggcacccg 393 ||||||| |||||||||||||| ||| |||| ||| || | |||||||||||||| Sbjct: 334 gttggactcgctggaccagaacctggccaagaatgaggccggcggcatcatcggcacccg 393 Query: 394 gttcgaggacgccgacgtcaagtccaccccgttccagccctac 436 ||||||| | |||| ||||||||||||||||| ||||||||| Sbjct: 394 gttcgagtcctccgaagtcaagtccaccccgttgcagccctac 436 Score = 153 bits (77), Expect = 6e-34 Identities = 101/109 (92%) Strand = Plus / Plus Query: 60 gagcagccatggcttcgtcggtggccgccgcggcgagcacgttcctcgggacccggctgg 119 |||||||||||||||| ||||||||||||||||||||||| ||||| || ||||| |||| Sbjct: 47 gagcagccatggcttcatcggtggccgccgcggcgagcacattcctgggcacccgcctgg 106 Query: 120 cggacccggcgccgcagaacgggcgcatcgtggcgcggttcggcttcgg 168 ||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 107 cggacccggcgccacagaacgggcgcatcgtggcccggttcgggttcgg 155
>emb|Y10786.1|SSY10786 S.stapfianus pSD.76 mRNA Length = 332 Score = 139 bits (70), Expect = 9e-30 Identities = 85/90 (94%) Strand = Plus / Plus Query: 86 gccgcggcgagcacgttcctcgggacccggctggcggacccggcgccgcagaacgggcgc 145 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 54 gccgcggcgagcacgttcctcgggacccgcctggcggacccggcgccccagaacgggcgc 113 Query: 146 atcgtggcgcggttcggcttcggcaagaag 175 ||||||||||||||| |||||||||||| Sbjct: 114 atcgtggcgcggttcccgttcggcaagaag 143 Score = 133 bits (67), Expect = 5e-28 Identities = 124/143 (86%) Strand = Plus / Plus Query: 213 ccgaccggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggcacgctcg 272 ||||||||||||||||||||| |||||| |||||||||| ||||||||||| || | Sbjct: 187 ccgaccggccgctgtggttcccgggcgcgaaggcgcccgactacctcgacgggacctatg 246 Query: 273 tcggcgactacggcttcgaccccttcggcctcgggaagcccgcggagtacctgcagtacg 332 | ||||||||||| |||||||| | || ||||||||||||| |||||||||||||| || Sbjct: 247 tgggcgactacgggttcgacccgtgggggctcgggaagcccgtggagtacctgcagttcg 306 Query: 333 acgtggactccctggaccagaac 355 || ||||||| |||||||||||| Sbjct: 307 acctggactcgctggaccagaac 329
>gb|AF139466.2|AF139466 Vigna radiata chlorophyll a/b binding protein CP29 (CipCp29) mRNA, complete cds; nuclear gene for chloroplast product Length = 1118 Score = 97.6 bits (49), Expect = 3e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 219 ggccgctgtggttcctcggcgcgcaggcgcccgagtacctcgacggcacgctcgtcggcg 278 ||||| |||||| || ||||||| ||||||| |||| || ||||| | || ||||| | Sbjct: 221 ggccgttgtggtaccccggcgcgaaggcgccggagtggctggacgggagccttgtcggtg 280 Query: 279 actacggcttcgaccccttcggcctcgggaagcccgcggagtacctgcagtacgacgtgg 338 ||||||| |||||||| ||||| |||||||||||||||||||| |||||| || ||| Sbjct: 281 actacgggttcgacccgttcgggctcgggaagcccgcggagtatttgcagtttgaactgg 340 Query: 339 actccctggaccagaaccttgcccagaac 367 |||| |||||||||||||| ||| ||||| Sbjct: 341 actcgctggaccagaacctggccaagaac 369
>gb|AY954738.1| Ostreococcus tauri chloroplast chlorophyll a/b-binding protein CP26 precursor Lhcb5 gene, complete cds; nuclear gene for chloroplast product Length = 1445 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 254 tacctcgacggcacgctcgtcggcgactacggcttcgaccccttcggcctcgg 306 ||||||||||| ||||||| || ||||||||||| ||||| |||||||||| Sbjct: 837 tacctcgacggtacgctcgcgggtgactacggctttgacccgctcggcctcgg 889
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 74 tcgtcggtggccgccgcggcgagcac 99 ||||||||||||| |||||||||||| Sbjct: 2881901 tcgtcggtggccgacgcggcgagcac 2881876
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 68 atggcttcgtcggtggccgccgcggcgagc 97 |||||||||||| ||||||| ||||||||| Sbjct: 1698526 atggcttcgtcgttggccgcggcggcgagc 1698497
>ref|XM_526039.1| PREDICTED: Pan troglodytes similar to striated muscle preferentially expressed protein (LOC470657), mRNA Length = 10911 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcccagaacctggcgggtgag 379 ||||||||||||||||||||| Sbjct: 6397 gcccagaacctggcgggtgag 6417
>gb|AY603755.1| Homo sapiens striated muscle preferentially expressed protein mRNA, partial cds Length = 9282 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcccagaacctggcgggtgag 379 ||||||||||||||||||||| Sbjct: 4288 gcccagaacctggcgggtgag 4308
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 acctcgacggcacgctcgtcg 275 ||||||||||||||||||||| Sbjct: 1426896 acctcgacggcacgctcgtcg 1426916
>ref|XM_960770.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU01_0290) partial mRNA Length = 447 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 cgcacgcaaaggccgaggagg 38 ||||||||||||||||||||| Sbjct: 71 cgcacgcaaaggccgaggagg 91
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 gaaggccaaggcgcccccgac 210 ||||||||||||||||||||| Sbjct: 10560 gaaggccaaggcgcccccgac 10540 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 caagaagaaggccccgccgaagaaggcc 196 |||||||||||| ||| ||||||||||| Sbjct: 3381360 caagaagaaggctccggcgaagaaggcc 3381387
>gb|AE008829.1| Salmonella typhimurium LT2, section 133 of 220 of the complete genome Length = 20371 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ctggcgggtgagatcatcggc 388 ||||||||||||||||||||| Sbjct: 16976 ctggcgggtgagatcatcggc 16956
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 cctcgacggcacgctcgtcggcgac 280 ||||||||||||||| ||||||||| Sbjct: 590998 cctcgacggcacgcttgtcggcgac 591022
>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 12/20 Length = 274050 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ctggcgggtgagatcatcggc 388 ||||||||||||||||||||| Sbjct: 137582 ctggcgggtgagatcatcggc 137562
>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 209982 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 cgcacgcaaaggccgaggagg 38 ||||||||||||||||||||| Sbjct: 43884 cgcacgcaaaggccgaggagg 43864
>gb|AC158240.5| Pan troglodytes BAC clone CH251-542M19 from chromosome unknown, complete sequence Length = 217064 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcccagaacctggcgggtgag 379 ||||||||||||||||||||| Sbjct: 15804 gcccagaacctggcgggtgag 15824
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 ggccgccgcggcgagcacgttcctc 106 ||||||||||||| ||||||||||| Sbjct: 15345302 ggccgccgcggcgcgcacgttcctc 15345326
>gb|AC053503.7| Homo sapiens BAC clone RP11-316O14 from 2, complete sequence Length = 183625 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcccagaacctggcgggtgag 379 ||||||||||||||||||||| Sbjct: 135195 gcccagaacctggcgggtgag 135215
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ctggcgggtgagatcatcggc 388 ||||||||||||||||||||| Sbjct: 2802114 ctggcgggtgagatcatcggc 2802094
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 cgggcgcatcgtggcgcggtt 159 ||||||||||||||||||||| Sbjct: 5324906 cgggcgcatcgtggcgcggtt 5324886 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 cgcgcaggcgcccgagtacctcgac 262 |||||||||||||||| |||||||| Sbjct: 4490470 cgcgcaggcgcccgagcacctcgac 4490494
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence Length = 1214 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 254 tacctcgacggcacgctcgtcggcgactacggcttcgaccc 294 |||||||| |||||||| ||||||||| ||||||||||| Sbjct: 352 tacctcgatggcacgctgcccggcgactatggcttcgaccc 392
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 ctggcgggtgagatcatcggc 388 ||||||||||||||||||||| Sbjct: 2825439 ctggcgggtgagatcatcggc 2825419
>gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosynthetic gene cluster, complete sequence Length = 59816 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 cgccgcggcgagcacgttcctcggg 109 |||||||||||||| |||||||||| Sbjct: 49515 cgccgcggcgagcatgttcctcggg 49539
>emb|Y13918.1|PABY13918 Pseudomonas aeruginosa phage phi CTX DNA, complete genome Length = 35559 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 gcttcggcaagaagaaggccc 182 ||||||||||||||||||||| Sbjct: 28419 gcttcggcaagaagaaggccc 28439
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 cgcgcaggcgcccgagtacctcgac 262 ||||||||||||| ||||||||||| Sbjct: 1798284 cgcgcaggcgccccagtacctcgac 1798260
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 aggccccgccgaagaaggcca 197 ||||||||||||||||||||| Sbjct: 2058063 aggccccgccgaagaaggcca 2058083
>emb|AL662972.3|OSJN00173 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063G07, complete sequence Length = 157622 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 ggccgccgcggcgagcacgttcctc 106 ||||||||||||| ||||||||||| Sbjct: 34186 ggccgccgcggcgcgcacgttcctc 34210
>gb|L27117.1|TRBH1C9AAA Trypanosoma cruzi histone H1 (H1.C9) mRNA, complete cds Length = 307 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 gaagaaggccccgccgaagaaggcc 196 |||||||||| |||||||||||||| Sbjct: 59 gaagaaggcctcgccgaagaaggcc 83 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 aagaaggccccgccgaagaaggcc 196 ||||||||| |||||||||||||| Sbjct: 45 aagaaggcctcgccgaagaaggcc 68
>gb|L27120.1|TRBH1C6AAA Trypanosoma cruzi histone H1 (H1.C6) mRNA, 3' end Length = 502 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 gaagaaggccccgccgaagaaggcc 196 |||||||||| |||||||||||||| Sbjct: 38 gaagaaggcctcgccgaagaaggcc 62 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 aagaaggccccgccgaagaaggcc 196 ||||||||| |||||||||||||| Sbjct: 24 aagaaggcctcgccgaagaaggcc 47
>dbj|AB037718.1| Homo sapiens mRNA for KIAA1297 protein, partial cds Length = 6726 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gcccagaacctggcgggtgag 379 ||||||||||||||||||||| Sbjct: 1732 gcccagaacctggcgggtgag 1752
>dbj|AB008550.1| Pseudomonas aeruginosa phage phi CTX, complete genome sequence Length = 35580 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 162 gcttcggcaagaagaaggccc 182 ||||||||||||||||||||| Sbjct: 28419 gcttcggcaagaagaaggccc 28439
>ref|XM_493818.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1737 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gtcggtggccgccgcggcgagcac 99 ||||| |||||||||||||||||| Sbjct: 1678 gtcggcggccgccgcggcgagcac 1701
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ccccgccgaagaaggccaag 199 |||||||||||||||||||| Sbjct: 1966435 ccccgccgaagaaggccaag 1966454
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gtcggtggccgccgcggcgagcac 99 ||||| |||||||||||||||||| Sbjct: 1687675 gtcggcggccgccgcggcgagcac 1687698
>emb|Z78205.1|BHT1UL Bovine herpesvirus type 1 UL22-35 genes Length = 37000 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cggtggccgccgcggcgagc 97 |||||||||||||||||||| Sbjct: 3373 cggtggccgccgcggcgagc 3392
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 cggtggccgccgcggcgagc 97 |||||||||||||||||||| Sbjct: 34173 cggtggccgccgcggcgagc 34192
>ref|XM_388129.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07953.1) partial mRNA Length = 2367 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 ttgcccagaacctggcgggt 376 |||||||||||||||||||| Sbjct: 29 ttgcccagaacctggcgggt 10
>ref|XM_801854.1| Trypanosoma cruzi strain CL Brener histone h1 (Tc00.1047053510225.10) partial mRNA Length = 435 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gaagaaggccccgccgaagaaggc 195 |||||||||| ||||||||||||| Sbjct: 225 gaagaaggccgcgccgaagaaggc 248 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 aagaaggccccgccgaagaaggcc 196 ||||||||| |||||||||||||| Sbjct: 211 aagaaggcctcgccgaagaaggcc 234
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 150 tggcgcggttcggcttcggcaaga 173 ||||||| |||||||||||||||| Sbjct: 976065 tggcgcgattcggcttcggcaaga 976042
>emb|AJ436918.1|PSP436918 Poseidonemertes sp. 508 mitochondrial partial COI gene for cytochrome c oxidase subunit 1 Length = 658 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 agtccaccccgttccagccc 433 |||||||||||||||||||| Sbjct: 334 agtccaccccgttccagccc 315
>gb|BC041922.1| Homo sapiens fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific), mRNA (cDNA clone IMAGE:5300179) Length = 1835 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 ggcggacccggcgccgcagaacgg 141 ||||||||||||||||| |||||| Sbjct: 841 ggcggacccggcgccgcggaacgg 864
>gb|AY046273.1| Trypanosoma cruzi histone H1 gene, partial cds Length = 249 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gaagaaggccccgccgaagaaggc 195 |||||||||| ||||||||||||| Sbjct: 39 gaagaaggccgcgccgaagaaggc 62 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 aagaaggccccgccgaagaaggcc 196 ||||||||| |||||||||||||| Sbjct: 25 aagaaggcctcgccgaagaaggcc 48
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gtcggtggccgccgcggcgagcac 99 ||||| |||||||||||||||||| Sbjct: 1687673 gtcggcggccgccgcggcgagcac 1687696
>gb|AF305082.1|AF305082 Homo sapiens alpha(1,3)-fucosyltransferase IV gene, promoter sequence, 5'UTR, and partial CDS Length = 3094 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ggcggacccggcgccgcagaacgg 141 ||||||||||||||||| |||||| Sbjct: 2525 ggcggacccggcgccgcggaacgg 2502
>dbj|AK110783.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-C04, full insert sequence Length = 1949 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gtcggtggccgccgcggcgagcac 99 ||||| |||||||||||||||||| Sbjct: 1806 gtcggcggccgccgcggcgagcac 1829
>dbj|AP000943.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867G2, complete sequence Length = 192299 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ggcggacccggcgccgcagaacgg 141 ||||||||||||||||| |||||| Sbjct: 47205 ggcggacccggcgccgcggaacgg 47182
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tggccgccgcggcgagcacg 100 |||||||||||||||||||| Sbjct: 2557863 tggccgccgcggcgagcacg 2557844
>dbj|AB041774.1| Homo sapiens gene, 5' flanking region Length = 1098 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 118 ggcggacccggcgccgcagaacgg 141 ||||||||||||||||| |||||| Sbjct: 580 ggcggacccggcgccgcggaacgg 557
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 gtcggtggccgccgcggcgagcac 99 ||||| |||||||||||||||||| Sbjct: 100138 gtcggcggccgccgcggcgagcac 100161 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,538,397 Number of Sequences: 3902068 Number of extensions: 2538397 Number of successful extensions: 61760 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 60053 Number of HSP's gapped (non-prelim): 1703 length of query: 445 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 423 effective length of database: 17,147,199,772 effective search space: 7253265503556 effective search space used: 7253265503556 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
