ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet98b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK102334.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 1e-71
2dbj|AK061524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 278 1e-71
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 240 3e-60
4gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 240 3e-60
5emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 240 3e-60
6gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.099
7gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 42 1.5
8gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 42 1.5
9emb|AL158151.16| Human DNA sequence from clone RP11-247A12 on ch... 42 1.5
10emb|AJ223176.1|SGAJ3176 Streptomyces granaticolor pkg4, pkg3 gen... 42 1.5
11gb|AC157497.3| Pan troglodytes BAC clone CH251-490K17 from chrom... 42 1.5
12dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.5
13ref|NM_202321.1| Arabidopsis thaliana PP2A-1; protein serine/thr... 40 6.1
14ref|NM_104676.3| Arabidopsis thaliana PP2A-1; protein serine/thr... 40 6.1
15ref|NM_104514.2| Arabidopsis thaliana RNA binding / pseudouridin... 40 6.1
16ref|XM_478504.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
17ref|XM_506381.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.1
18ref|XM_362105.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.1
19gb|AC147546.1| Rattus norvegicus chromosome 1 clone RP32-323A19 ... 40 6.1
20gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 geno... 40 6.1
21gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 6.1
22gb|BT010200.1| Arabidopsis thaliana At1g56345 gene, complete cds 40 6.1
23emb|X78877.1|HVACXPII3 Hordeum vulgare L. (Alexis) mRNA for seri... 40 6.1
24gb|CP000088.1| Thermobifida fusca YX, complete genome 40 6.1
25gb|AY063942.1| Arabidopsis thaliana putative serine/threonine pr... 40 6.1
26gb|AY026074.1| Monosiga brevicollis elongation factor 2 mRNA, co... 40 6.1
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
28emb|BX814752.1|CNS0ADL7 Arabidopsis thaliana Full-length cDNA Co... 40 6.1
29gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13... 40 6.1
30gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14... 40 6.1
31gb|AY087557.1| Arabidopsis thaliana clone 36621 mRNA, complete s... 40 6.1
32dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
33dbj|AK103744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
34gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 6.1
35dbj|AK063353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
36gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.1
37emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chr... 40 6.1

>dbj|AK102334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091A05, full
           insert sequence
          Length = 1245

 Score =  278 bits (140), Expect = 1e-71
 Identities = 257/296 (86%)
 Strand = Plus / Plus

                                                                       
Query: 115 accggggagtacccgtgcccggtgtccccgccctacccggccgtctccaaggacgtggag 174
           |||||||||||||||  |||||| ||||| ||||||||||| |  |||||||||||||||
Sbjct: 132 accggggagtacccggtcccggtctcccctccctacccggcggcgtccaaggacgtggag 191

                                                                       
Query: 175 ctccggcgcgccatgaccgcctccgcccgctccggtgcctactcctccgccgccgtcgtg 234
           ||||||||||||||||| ||||| || |||||||  ||||||||||||||  ||||||||
Sbjct: 192 ctccggcgcgccatgacggcctcggcgcgctccgccgcctactcctccgcgcccgtcgtg 251

                                                                       
Query: 235 ttcgaggacgagtggctcgccgtggtggacaagcccgccggcgtctactgcgaggccctc 294
           ||||||||||||||||||||||| || ||||||||||| || ||||||||||| ||||||
Sbjct: 252 ttcgaggacgagtggctcgccgtcgtcgacaagcccgcgggagtctactgcgacgccctc 311

                                                                       
Query: 295 ctctccgccctcccttgctccaccgcctcctcaggggatccttcaagtaagcccaacctt 354
           |||||||| |||||||||||| | ||| | | |||||||    ||| ||| || ||||||
Sbjct: 312 ctctccgctctcccttgctccgctgccacattaggggatgaagcaactaaacctaacctt 371

                                                                   
Query: 355 cacctggcaaacaggctagatcgtgatactagtggtctcatggtcatcaccaaatg 410
           ||||| || ||||||||||| |||||||| ||||| |||||||| || ||||||||
Sbjct: 372 cacctcgccaacaggctagaccgtgataccagtgggctcatggttattaccaaatg 427



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>dbj|AK061524.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C10, full
           insert sequence
          Length = 1261

 Score =  278 bits (140), Expect = 1e-71
 Identities = 257/296 (86%)
 Strand = Plus / Plus

                                                                       
Query: 115 accggggagtacccgtgcccggtgtccccgccctacccggccgtctccaaggacgtggag 174
           |||||||||||||||  |||||| ||||| ||||||||||| |  |||||||||||||||
Sbjct: 153 accggggagtacccggtcccggtctcccctccctacccggcggcgtccaaggacgtggag 212

                                                                       
Query: 175 ctccggcgcgccatgaccgcctccgcccgctccggtgcctactcctccgccgccgtcgtg 234
           ||||||||||||||||| ||||| || |||||||  ||||||||||||||  ||||||||
Sbjct: 213 ctccggcgcgccatgacggcctcggcgcgctccgccgcctactcctccgcgcccgtcgtg 272

                                                                       
Query: 235 ttcgaggacgagtggctcgccgtggtggacaagcccgccggcgtctactgcgaggccctc 294
           ||||||||||||||||||||||| || ||||||||||| || ||||||||||| ||||||
Sbjct: 273 ttcgaggacgagtggctcgccgtcgtcgacaagcccgcgggagtctactgcgacgccctc 332

                                                                       
Query: 295 ctctccgccctcccttgctccaccgcctcctcaggggatccttcaagtaagcccaacctt 354
           |||||||| |||||||||||| | ||| | | |||||||    ||| ||| || ||||||
Sbjct: 333 ctctccgctctcccttgctccgctgccacattaggggatgaagcaactaaacctaacctt 392

                                                                   
Query: 355 cacctggcaaacaggctagatcgtgatactagtggtctcatggtcatcaccaaatg 410
           ||||| || ||||||||||| |||||||| ||||| |||||||| || ||||||||
Sbjct: 393 cacctcgccaacaggctagaccgtgataccagtgggctcatggttattaccaaatg 448



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  240 bits (121), Expect = 3e-60
 Identities = 181/201 (90%)
 Strand = Plus / Minus

                                                                            
Query: 115      accggggagtacccgtgcccggtgtccccgccctacccggccgtctccaaggacgtggag 174
                |||||||||||||||  |||||| ||||| ||||||||||| |  |||||||||||||||
Sbjct: 22984565 accggggagtacccggtcccggtctcccctccctacccggcggcgtccaaggacgtggag 22984506

                                                                            
Query: 175      ctccggcgcgccatgaccgcctccgcccgctccggtgcctactcctccgccgccgtcgtg 234
                ||||||||||||||||| ||||| || |||||||  ||||||||||||||  ||||||||
Sbjct: 22984505 ctccggcgcgccatgacggcctcggcgcgctccgccgcctactcctccgcgcccgtcgtg 22984446

                                                                            
Query: 235      ttcgaggacgagtggctcgccgtggtggacaagcccgccggcgtctactgcgaggccctc 294
                ||||||||||||||||||||||| || ||||||||||| || ||||||||||| ||||||
Sbjct: 22984445 ttcgaggacgagtggctcgccgtcgtcgacaagcccgcgggagtctactgcgacgccctc 22984386

                                     
Query: 295      ctctccgccctcccttgctcc 315
                |||||||| ||||||||||||
Sbjct: 22984385 ctctccgctctcccttgctcc 22984365



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                            
Query: 349      aaccttcacctggcaaacaggctagatcgtgatactagtggtctcatggtcatcaccaaa 408
                ||||||||||| || ||||||||||| |||||||| ||||| |||||||| || ||||||
Sbjct: 22983268 aaccttcacctcgccaacaggctagaccgtgataccagtgggctcatggttattaccaaa 22983209

                  
Query: 409      tg 410
                ||
Sbjct: 22983208 tg 22983207



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  240 bits (121), Expect = 3e-60
 Identities = 181/201 (90%)
 Strand = Plus / Minus

                                                                            
Query: 115      accggggagtacccgtgcccggtgtccccgccctacccggccgtctccaaggacgtggag 174
                |||||||||||||||  |||||| ||||| ||||||||||| |  |||||||||||||||
Sbjct: 22912756 accggggagtacccggtcccggtctcccctccctacccggcggcgtccaaggacgtggag 22912697

                                                                            
Query: 175      ctccggcgcgccatgaccgcctccgcccgctccggtgcctactcctccgccgccgtcgtg 234
                ||||||||||||||||| ||||| || |||||||  ||||||||||||||  ||||||||
Sbjct: 22912696 ctccggcgcgccatgacggcctcggcgcgctccgccgcctactcctccgcgcccgtcgtg 22912637

                                                                            
Query: 235      ttcgaggacgagtggctcgccgtggtggacaagcccgccggcgtctactgcgaggccctc 294
                ||||||||||||||||||||||| || ||||||||||| || ||||||||||| ||||||
Sbjct: 22912636 ttcgaggacgagtggctcgccgtcgtcgacaagcccgcgggagtctactgcgacgccctc 22912577

                                     
Query: 295      ctctccgccctcccttgctcc 315
                |||||||| ||||||||||||
Sbjct: 22912576 ctctccgctctcccttgctcc 22912556



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                            
Query: 349      aaccttcacctggcaaacaggctagatcgtgatactagtggtctcatggtcatcaccaaa 408
                ||||||||||| || ||||||||||| |||||||| ||||| |||||||| || ||||||
Sbjct: 22911459 aaccttcacctcgccaacaggctagaccgtgataccagtgggctcatggttattaccaaa 22911400

                  
Query: 409      tg 410
                ||
Sbjct: 22911399 tg 22911398



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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score =  240 bits (121), Expect = 3e-60
 Identities = 181/201 (90%)
 Strand = Plus / Minus

                                                                         
Query: 115   accggggagtacccgtgcccggtgtccccgccctacccggccgtctccaaggacgtggag 174
             |||||||||||||||  |||||| ||||| ||||||||||| |  |||||||||||||||
Sbjct: 93842 accggggagtacccggtcccggtctcccctccctacccggcggcgtccaaggacgtggag 93783

                                                                         
Query: 175   ctccggcgcgccatgaccgcctccgcccgctccggtgcctactcctccgccgccgtcgtg 234
             ||||||||||||||||| ||||| || |||||||  ||||||||||||||  ||||||||
Sbjct: 93782 ctccggcgcgccatgacggcctcggcgcgctccgccgcctactcctccgcgcccgtcgtg 93723

                                                                         
Query: 235   ttcgaggacgagtggctcgccgtggtggacaagcccgccggcgtctactgcgaggccctc 294
             ||||||||||||||||||||||| || ||||||||||| || ||||||||||| ||||||
Sbjct: 93722 ttcgaggacgagtggctcgccgtcgtcgacaagcccgcgggagtctactgcgacgccctc 93663

                                  
Query: 295   ctctccgccctcccttgctcc 315
             |||||||| ||||||||||||
Sbjct: 93662 ctctccgctctcccttgctcc 93642



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                         
Query: 349   aaccttcacctggcaaacaggctagatcgtgatactagtggtctcatggtcatcaccaaa 408
             ||||||||||| || ||||||||||| |||||||| ||||| |||||||| || ||||||
Sbjct: 92545 aaccttcacctcgccaacaggctagaccgtgataccagtgggctcatggttattaccaaa 92486

               
Query: 409   tg 410
             ||
Sbjct: 92485 tg 92484



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 256    gtggtggacaagcccgccggcgt 278
              |||||||||||||||||||||||
Sbjct: 310219 gtggtggacaagcccgccggcgt 310241



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 255     cgtggtggacaagcccgccggc 276
               ||||||||||||||||||||||
Sbjct: 1274784 cgtggtggacaagcccgccggc 1274805



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 258    ggtggacaagcccgccggcgt 278
              |||||||||||||||||||||
Sbjct: 223339 ggtggacaagcccgccggcgt 223319



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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 256     gtggtggacaagcccgccggc 276
               |||||||||||||||||||||
Sbjct: 4052877 gtggtggacaagcccgccggc 4052897



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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 183     cgccatgaccgcctccgcccg 203
               |||||||||||||||||||||
Sbjct: 4655898 cgccatgaccgcctccgcccg 4655878



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>emb|AL158151.16| Human DNA sequence from clone RP11-247A12 on chromosome 9 Contains the
             CRAT gene for carnitine acetyltransferase (CAT1), the
             PPP2R4 gene for protein phosphatase 2A, regulatory subunit
             B' (PR 53) (PTPA), the IER5L gene for immediate early
             response 5-like, a novel gene and three CpG islands,
             complete sequence
          Length = 162445

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 310   tgctccaccgcctcctcaggggatc 334
             |||| ||||||||||||||||||||
Sbjct: 87158 tgcttcaccgcctcctcaggggatc 87182



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>emb|AJ223176.1|SGAJ3176 Streptomyces granaticolor pkg4, pkg3 genes and ORF1
          Length = 6992

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 182  gcgccatgaccgcctccgcccgctc 206
            |||||||||||||| ||||||||||
Sbjct: 5015 gcgccatgaccgccgccgcccgctc 4991



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>gb|AC157497.3| Pan troglodytes BAC clone CH251-490K17 from chromosome unknown,
             complete sequence
          Length = 207664

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 310   tgctccaccgcctcctcaggggatc 334
             |||| ||||||||||||||||||||
Sbjct: 33608 tgcttcaccgcctcctcaggggatc 33632



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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 256     gtggtggacaagcccgccggc 276
               |||||||||||||||||||||
Sbjct: 2035682 gtggtggacaagcccgccggc 2035662



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>ref|NM_202321.1| Arabidopsis thaliana PP2A-1; protein serine/threonine phosphatase
           AT1G59830 (PP2A-1) transcript variant AT1G59830.2 mRNA,
           complete cds
          Length = 1319

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 212 cctactcctccgccgccgtcgtgttcga 239
           |||||||||||| ||||| |||||||||
Sbjct: 57  cctactcctccgtcgccgacgtgttcga 84



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>ref|NM_104676.3| Arabidopsis thaliana PP2A-1; protein serine/threonine phosphatase
           AT1G59830 (PP2A-1) transcript variant AT1G59830.1 mRNA,
           complete cds
          Length = 1289

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 212 cctactcctccgccgccgtcgtgttcga 239
           |||||||||||| ||||| |||||||||
Sbjct: 84  cctactcctccgtcgccgacgtgttcga 111



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>ref|NM_104514.2| Arabidopsis thaliana RNA binding / pseudouridine synthase/
           pseudouridylate synthase AT1G56345 mRNA, complete cds
          Length = 1392

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 371 tagatcgtgatactagtggt 390
           ||||||||||||||||||||
Sbjct: 363 tagatcgtgatactagtggt 382



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>ref|XM_478504.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2093

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  tcgaggacgagtggctcgcc 255
            ||||||||||||||||||||
Sbjct: 988  tcgaggacgagtggctcgcc 1007



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>ref|XM_506381.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007H12.40
           mRNA
          Length = 2154

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 tcgaggacgagtggctcgcc 255
           ||||||||||||||||||||
Sbjct: 967 tcgaggacgagtggctcgcc 986



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>ref|XM_362105.1| Magnaporthe grisea 70-15 hypothetical protein (MG04550.4) partial
           cds
          Length = 1767

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 200 cccgctccggtgcctactcc 219
           ||||||||||||||||||||
Sbjct: 50  cccgctccggtgcctactcc 69



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>gb|AC147546.1| Rattus norvegicus chromosome 1 clone RP32-323A19 map q33, complete
             sequence
          Length = 118946

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   gccctcctctccgccctccc 308
             ||||||||||||||||||||
Sbjct: 84976 gccctcctctccgccctccc 84957



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>gb|AC007258.3| Arabidopsis thaliana chromosome I BAC F23H11 genomic sequence, complete
             sequence
          Length = 144422

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 212   cctactcctccgccgccgtcgtgttcga 239
             |||||||||||| ||||| |||||||||
Sbjct: 88234 cctactcctccgtcgccgacgtgttcga 88207



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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 92      acgcggtgatgtcggcggcc 111
               ||||||||||||||||||||
Sbjct: 2922391 acgcggtgatgtcggcggcc 2922372



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>gb|BT010200.1| Arabidopsis thaliana At1g56345 gene, complete cds
          Length = 969

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 371 tagatcgtgatactagtggt 390
           ||||||||||||||||||||
Sbjct: 356 tagatcgtgatactagtggt 375



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>emb|X78877.1|HVACXPII3 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-3
          Length = 1979

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 224 ccgccgtcgtgttcgaggacgagt 247
           ||||||||||||||||| ||||||
Sbjct: 676 ccgccgtcgtgttcgagtacgagt 653



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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 255     cgtggtggacaagcccgccggcgt 278
               |||||||||||||||||| |||||
Sbjct: 1310133 cgtggtggacaagcccgcgggcgt 1310156



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>gb|AY063942.1| Arabidopsis thaliana putative serine/threonine protein phosphatase
           type 2A (At1g59830) mRNA, complete cds
          Length = 1288

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 212 cctactcctccgccgccgtcgtgttcga 239
           |||||||||||| ||||| |||||||||
Sbjct: 56  cctactcctccgtcgccgacgtgttcga 83



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>gb|AY026074.1| Monosiga brevicollis elongation factor 2 mRNA, complete cds
          Length = 2918

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   agcaagcgtacaggacgcgg 97
            ||||||||||||||||||||
Sbjct: 2172 agcaagcgtacaggacgcgg 2153



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 236      tcgaggacgagtggctcgcc 255
                ||||||||||||||||||||
Sbjct: 20638876 tcgaggacgagtggctcgcc 20638857



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>emb|BX814752.1|CNS0ADL7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB92ZE04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1250

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 212 cctactcctccgccgccgtcgtgttcga 239
           |||||||||||| ||||| |||||||||
Sbjct: 84  cctactcctccgtcgccgacgtgttcga 111



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>gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13N6 genomic sequence,
            complete sequence
          Length = 90698

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  tagatcgtgatactagtggt 390
            ||||||||||||||||||||
Sbjct: 4035 tagatcgtgatactagtggt 4016



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>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete
             sequence
          Length = 111481

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   tagatcgtgatactagtggt 390
             ||||||||||||||||||||
Sbjct: 14196 tagatcgtgatactagtggt 14215



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>gb|AY087557.1| Arabidopsis thaliana clone 36621 mRNA, complete sequence
          Length = 1261

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 212 cctactcctccgccgccgtcgtgttcga 239
           |||||||||||| ||||| |||||||||
Sbjct: 56  cctactcctccgtcgccgacgtgttcga 83



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>dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0007H12
          Length = 150881

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    tcgaggacgagtggctcgcc 255
              ||||||||||||||||||||
Sbjct: 129955 tcgaggacgagtggctcgcc 129936



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>dbj|AK103744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138N10, full
            insert sequence
          Length = 2092

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  tcgaggacgagtggctcgcc 255
            ||||||||||||||||||||
Sbjct: 987  tcgaggacgagtggctcgcc 1006



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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    cgaggacgagtggctcgccg 256
              ||||||||||||||||||||
Sbjct: 721857 cgaggacgagtggctcgccg 721876



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>dbj|AK063353.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C03, full
           insert sequence
          Length = 2154

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 236 tcgaggacgagtggctcgcc 255
           ||||||||||||||||||||
Sbjct: 967 tcgaggacgagtggctcgcc 986



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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 285    cgaggccctcctctccgccctccc 308
              |||||||| |||||||||||||||
Sbjct: 300268 cgaggcccacctctccgccctccc 300245



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>emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chromosome 2, complete
             sequence
          Length = 204214

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   ccctcctctccgccctccct 309
             ||||||||||||||||||||
Sbjct: 99325 ccctcctctccgccctccct 99306


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,257,450
Number of Sequences: 3902068
Number of extensions: 2257450
Number of successful extensions: 54427
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53596
Number of HSP's gapped (non-prelim): 829
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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