>UNC5A_RAT (O08721) Netrin receptor UNC5A precursor (Unc-5 homolog A) (Unc-5|
           homolog 1)
          Length = 898

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 116 GLVAAGVAAFLIISAAGALYCRAK 187
           GLVA  V  FL++ A G +YCR K
Sbjct: 364 GLVAVAVCLFLLLLALGLIYCRKK 387

>FA10V_TROCA (P81428) Trocarin precursor (EC 3.4.21.6) (Venom coagulation factor|
           Xa-like protease) [Contains: Trocarin light chain;
           Trocarin heavy chain]
          Length = 455

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
 Frame = +1

Query: 130 RGCCLPYHISSWCSLLPS*KGGDCETLGHRT*RT---TAKSFCNR------CACTETIRA 282
           RG C     S  C+ LP+ +G +CE + +++ R        FC R      C+C E+ R 
Sbjct: 98  RGTCKDGIGSYTCTCLPNYEGKNCEKVLYQSCRVDNGNCWHFCKRVQSETQCSCAESYRL 157

Query: 283 GI 288
           G+
Sbjct: 158 GV 159

>MALT1_HUMAN (Q9UDY8) Mucosa-associated lymphoid tissue lymphoma translocation|
           protein 1 (EC 3.4.22.-) (MALT lymphoma-associated
           translocation) (Paracaspase)
          Length = 824

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
 Frame = +2

Query: 41  AGGAGHDHSAQTPSHSV-HKH 100
           +GGAGH HS Q P H V H H
Sbjct: 744 SGGAGHYHSLQDPFHGVYHSH 764

>G3P_CRYNE (Q9Y8E9) Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)|
           (GAPDH)
          Length = 339

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/66 (28%), Positives = 35/66 (53%)
 Frame = +2

Query: 131 GVAAFLIISAAGALYCRAKRVGTVKPWVTGLSGQLQKAFVTGVPALKRSELESASEDFSN 310
           G AA +I S+ GA     K + ++   +TG+S ++  + V+ V  + R E  ++ E+  N
Sbjct: 200 GAAANIIPSSTGAAKAVGKVIPSLNGKLTGMSFRVPTSDVSVVDLVCRIEKGASYEEIKN 259

Query: 311 IIGSTS 328
           +I   S
Sbjct: 260 VIKKAS 265

>FA10V_HOPST (P83370) Hopsarin-D (EC 3.4.21.6) [Contains: Hopsarin-D light|
           chain; Hopsarin-D heavy chain] (Fragments)
          Length = 376

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
 Frame = +1

Query: 130 RGCCLPYHISSWCSLLPS*KGGDCETLGHRT*RT---TAKSFCNR------CACTETIRA 282
           RG C     S  C+ LP+ +G +CE +  ++ R        FC R      C+C E+ R 
Sbjct: 58  RGTCKDGIGSYTCTCLPNYEGKNCEKVLFKSCRAFNGNCWHFCKRVQSETQCSCAESYRL 117

Query: 283 GI 288
           G+
Sbjct: 118 GV 119

>TRUB_METAC (Q8TRR5) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 338

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 24/67 (35%), Positives = 31/67 (46%)
 Frame = +2

Query: 86  SVHKHSWTTYGLVAAGVAAFLIISAAGALYCRAKRVGTVKPWVTGLSGQLQKAFVTGVPA 265
           ++ K S  T   VAA V A L ++ AG         G++ P VTGL   L       VPA
Sbjct: 46  NIDKPSGPTSHEVAAWVKAILGVNTAG-------HAGSLDPKVTGLLPTLLGKATKAVPA 98

Query: 266 LKRSELE 286
           L+ S  E
Sbjct: 99  LRLSGKE 105

>GSH2_HUMAN (Q9BZM3) Homeobox protein GSH-2|
          Length = 304

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 19/53 (35%), Positives = 21/53 (39%)
 Frame = +2

Query: 14  PHPLKFKPAAGGAGHDHSAQTPSHSVHKHSWTTYGLVAAGVAAFLIISAAGAL 172
           P   +F P    A H H    P H  H H     G  AA  AA    +AA AL
Sbjct: 113 PGDAQFCPRVNHAHHHH--HPPQHHHHHHQPQQPGSAAAAAAAAAAAAAAAAL 163

>DTYMK_MOUSE (P97930) Thymidylate kinase (EC 2.7.4.9) (dTMP kinase)|
          Length = 227

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 59  DHSAQTPSHSVHKHSWTTYGLVAAGVA 139
           D S +TPS ++H+  W +YG  +A +A
Sbjct: 179 DASKRTPSETLHRGHWGSYGNKSASIA 205

>KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 476

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
 Frame = +2

Query: 11  LPHPLK----FKPAAGGAGHDHSAQTPSHSVHKHSWTTYGL-VAAGVAAFLII 154
           +PH L+      P   G GH HS Q P  SV        GL V +G+ AFL++
Sbjct: 197 IPHALEPHSHHAPEQPGHGHSHSGQGPILSV--------GLWVLSGIVAFLVV 241

>K0310_HUMAN (O15027) Protein KIAA0310|
          Length = 2179

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 224  SGQLQKAFVTGVPALKRSELESASEDFSNII 316
            SG+ Q +F+TG PA   S LE  +E F  ++
Sbjct: 1417 SGEAQLSFLTGGPAAAASSLERETERFRELL 1447

>KE4L_CAEEL (Q9XTQ7) Hypothetical Ke4-like protein H13N06.5 in chromosome X|
          Length = 462

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
 Frame = +2

Query: 11  LPHPLKFKPAAGGAGHDHSAQTP----SHSVHKHSWTTYGLVAAGVAAFLII 154
           +PH     PA  G GH HS         HS   H  +  G V  G+ AFL +
Sbjct: 212 IPHAT---PAGDGHGHSHSHGHSHGGGGHSHGAHDMSVGGWVLGGIIAFLTV 260

>GSH2_MOUSE (P31316) Homeobox protein GSH-2|
          Length = 305

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 18/52 (34%), Positives = 20/52 (38%)
 Frame = +2

Query: 14  PHPLKFKPAAGGAGHDHSAQTPSHSVHKHSWTTYGLVAAGVAAFLIISAAGA 169
           P   +F P    A H H    P H  H H     G  AA  AA    +AA A
Sbjct: 113 PGDAQFCPRVSHAHHHH--HPPQHHHHHHQPQQPGSAAAAAAAAAAAAAAAA 162

>5HT6R_RAT (P31388) 5-hydroxytryptamine 6 receptor (5-HT-6) (Serotonin|
           receptor 6) (ST-B17)
          Length = 436

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = +2

Query: 119 LVAAGVAAFLIISAAGALYCR-----AKRVGTVKPWVTGLSGQLQKAFVTGVPALKRSEL 283
           LVA+GV  FL   A    YCR      K+   V    TG +GQ  +     VP   R  +
Sbjct: 190 LVASGVTFFLPSGAICFTYCRILLAARKQAVQVASLTTGTAGQALETL--QVPRTPRPGM 247

Query: 284 ESA 292
           ESA
Sbjct: 248 ESA 250

>XDH_MOUSE (Q00519) Xanthine dehydrogenase/oxidase [Includes: Xanthine|
            dehydrogenase (EC 1.17.1.4) (XD); Xanthine oxidase (EC
            1.17.3.2) (XO) (Xanthine oxidoreductase)]
          Length = 1334

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 40   SWGSWARSFGSNSISLCA*AF--LDNLWFSCSRGCCLPYHISSW---CSLLPS*KGGDCE 204
            SW SW     ++++SL A  F    NL +S       P+H  S+   CS +      DC 
Sbjct: 1114 SWESWVMDAYTSAVSLSATGFYKTPNLGYSFETNSGNPFHYFSYGVACSEVEI----DCL 1169

Query: 205  TLGHRT*RT 231
            T  H+  RT
Sbjct: 1170 TGDHKNLRT 1178

>5HT6R_MOUSE (Q9R1C8) 5-hydroxytryptamine 6 receptor (5-HT-6) (Serotonin|
           receptor 6)
          Length = 440

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
 Frame = +2

Query: 113 YGLVAAGVAAFLIISAAGALYCR-----AKRVGTVKPWVTGLSGQLQKAFVTGVPALKRS 277
           Y LVA+GV  FL   A    YCR      K+   V    TG +   Q      VP   R 
Sbjct: 188 YVLVASGVTFFLPSGAICFTYCRILLAARKQAVQVASLTTGTATAGQALETLQVPRTPRP 247

Query: 278 ELESA 292
            +ESA
Sbjct: 248 GMESA 252

>Y973_HAEIN (Q57133) Hypothetical protein HI0973|
          Length = 289

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 38  AAGGAGHDHSAQTPSHSVHKHSWTT 112
           ++GG+G   SA TPS S+H  + +T
Sbjct: 23  SSGGSGDSQSAHTPSTSIHTQNNST 47

>PSAB_PROMP (Q9RC07) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
          Length = 742

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +2

Query: 17  HPLKFKPAAGGAGHDHSAQTPSHSVHKHSWTTYGLVAAGVAAFLIISAAGAL 172
           HPL     + G  HD   +T ++S+H        L A GVA  L+    GAL
Sbjct: 312 HPLDPHKGSFGINHDGIYETVTNSLHFQ--LGLALAALGVATSLVAQHMGAL 361


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,798,270
Number of Sequences: 219361
Number of extensions: 916763
Number of successful extensions: 2343
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2342
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)