ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet97h09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY124488.1| Danio rerio protein 4.1 mRNA, complete cds Length = 5097 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 17 tcttcctctcgtctcctcctctc 39 ||||||||||||||||||||||| Sbjct: 4111 tcttcctctcgtctcctcctctc 4089
>ref|XM_993077.1| PREDICTED: Mus musculus mitogen-activated protein kinase kinase kinase 9 (Map3k9), mRNA Length = 3259 Score = 46.1 bits (23), Expect = 0.047 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcc-cctcctct 94 |||||||||||||||||||||| |||||||| Sbjct: 418 ggccgccgcctcctcctcgtcctcctcctct 388
>dbj|AK155677.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730120L22 product:mitogen-activated protein kinase kinase kinase 9, full insert sequence Length = 3964 Score = 46.1 bits (23), Expect = 0.047 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcc-cctcctct 94 |||||||||||||||||||||| |||||||| Sbjct: 419 ggccgccgcctcctcctcgtcctcctcctct 389
>gb|AC124595.4| Mus musculus BAC clone RP23-18J1 from chromosome 12, complete sequence Length = 210781 Score = 46.1 bits (23), Expect = 0.047 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcc-cctcctct 94 |||||||||||||||||||||| |||||||| Sbjct: 129084 ggccgccgcctcctcctcgtcctcctcctct 129054
>dbj|AK053843.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130314H24 product:MIXED LINEAGE KINASE MLK1 (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3230 Score = 46.1 bits (23), Expect = 0.047 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcc-cctcctct 94 |||||||||||||||||||||| |||||||| Sbjct: 254 ggccgccgcctcctcctcgtcctcctcctct 224
>ref|NM_175084.2| Danio rerio erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) (epb41), mRNA Length = 5097 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 17 tcttcctctcgtctcctcctctc 39 ||||||||||||||||||||||| Sbjct: 4111 tcttcctctcgtctcctcctctc 4089
>ref|NM_177395.3| Mus musculus mitogen-activated protein kinase kinase kinase 9 (Map3k9), mRNA Length = 3225 Score = 46.1 bits (23), Expect = 0.047 Identities = 30/31 (96%), Gaps = 1/31 (3%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcc-cctcctct 94 |||||||||||||||||||||| |||||||| Sbjct: 250 ggccgccgcctcctcctcgtcctcctcctct 220
>emb|CR391910.16| Zebrafish DNA sequence from clone DKEY-108F8 in linkage group 16, complete sequence Length = 186084 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 17 tcttcctctcgtctcctcctctc 39 ||||||||||||||||||||||| Sbjct: 61274 tcttcctctcgtctcctcctctc 61252
>gb|AC133931.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013M05 map C3, complete sequence Length = 131117 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 tggccgccgcctcctcctcgtcccct 89 ||||||||||| |||||||||||||| Sbjct: 60012 tggccgccgccgcctcctcgtcccct 60037
>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome Length = 241087 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcc 86 |||||||||||||||||||||| Sbjct: 43694 ggccgccgcctcctcctcgtcc 43673
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 tggccgccgcctcctcctcgtcccct 89 ||||||||||| |||||||||||||| Sbjct: 13475453 tggccgccgccgcctcctcgtcccct 13475478 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 61 ccatggccgccgcctcctcctcgtcccc 88 ||||||||||| |||||||||| ||||| Sbjct: 8866744 ccatggccgcctcctcctcctcctcccc 8866771
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 67 ccgccgcctcctcctcgtcccc 88 |||||||||||||||||||||| Sbjct: 2576951 ccgccgcctcctcctcgtcccc 2576930
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 tggccgccgcctcctcctcgtcccct 89 ||||||||||| |||||||||||||| Sbjct: 13555632 tggccgccgccgcctcctcgtcccct 13555657 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 61 ccatggccgccgcctcctcctcgtcccc 88 ||||||||||| |||||||||| ||||| Sbjct: 8938407 ccatggccgcctcctcctcctcctcccc 8938434
>ref|XM_470598.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 462 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcc 86 ||||||||||||||||||||| Sbjct: 38 gccgccgcctcctcctcgtcc 18
>ref|NM_003777.2| Homo sapiens dynein, axonemal, heavy polypeptide 11 (DNAH11), mRNA Length = 14198 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tggccgccgcctcctcctcgt 84 ||||||||||||||||||||| Sbjct: 173 tggccgccgcctcctcctcgt 153
>ref|XM_471458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 993 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tggccgccgcctcctcctcgtcccc 88 ||||||||||| ||||||||||||| Sbjct: 8 tggccgccgccgcctcctcgtcccc 32
>gb|AC135918.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0115F21, complete sequence Length = 128493 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 tcttcttcctctcgtctcctcctct 38 |||||||||||||||||| |||||| Sbjct: 121444 tcttcttcctctcgtctcgtcctct 121420
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcc 86 ||||||||||||||||||||| Sbjct: 13915 gccgccgcctcctcctcgtcc 13895
>gb|AC111023.12| Mus musculus chromosome 19, clone RP23-221A9, complete sequence Length = 228107 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ctctcgtctcctcctctccac 42 ||||||||||||||||||||| Sbjct: 13653 ctctcgtctcctcctctccac 13633
>ref|XM_958850.1| Neurospora crassa OR74A hypothetical protein (NCU02787.1) partial mRNA Length = 3525 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtcc 86 ||||||||||||||||||||| Sbjct: 2167 gccgccgcctcctcctcgtcc 2187
>ref|XM_329974.1| Neurospora crassa OR74A hypothetical protein (NCU02787.1) partial mRNA Length = 3525 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtcc 86 ||||||||||||||||||||| Sbjct: 2167 gccgccgcctcctcctcgtcc 2187
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtcc 86 ||||||||||||||||||||| Sbjct: 29125376 gccgccgcctcctcctcgtcc 29125396 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtcc 86 ||||||||||||||||||||| Sbjct: 6743553 gccgccgcctcctcctcgtcc 6743573 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 31213929 gccgccgcctcctcctcgtc 31213948 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gccgcctcctcctcgtcccc 88 |||||||||||||||||||| Sbjct: 14528464 gccgcctcctcctcgtcccc 14528483 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cctctcgtctcctcctctcc 40 |||||||||||||||||||| Sbjct: 6901369 cctctcgtctcctcctctcc 6901388
>gb|AC004595.1| Homo sapiens BAC clone CTB-23M10 from 7, complete sequence Length = 136170 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tggccgccgcctcctcctcgt 84 ||||||||||||||||||||| Sbjct: 134054 tggccgccgcctcctcctcgt 134034
>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete sequence Length = 91084 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcc 86 ||||||||||||||||||||| Sbjct: 46000 gccgccgcctcctcctcgtcc 45980
>gb|AC158905.4| Mus musculus chromosome 19, clone RP23-237A13, complete sequence Length = 171018 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 ctctcgtctcctcctctccac 42 ||||||||||||||||||||| Sbjct: 81080 ctctcgtctcctcctctccac 81100
>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence Length = 142814 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tggccgccgcctcctcctcgtcccc 88 ||||||||||| ||||||||||||| Sbjct: 138453 tggccgccgccgcctcctcgtcccc 138477
>gb|AC097063.2| Homo sapiens chromosome 1 clone RP11-430H12, complete sequence Length = 183086 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 cccctcctctcagccccgctt 105 ||||||||||||||||||||| Sbjct: 60974 cccctcctctcagccccgctt 60954
>dbj|AK095018.1| Homo sapiens cDNA FLJ37699 fis, clone BRHIP2016788, weakly similar to Mus musculus left-right dynein (Lrd) mRNA Length = 2210 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tggccgccgcctcctcctcgt 84 ||||||||||||||||||||| Sbjct: 324 tggccgccgcctcctcctcgt 304
>gb|AC099732.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1203D03, complete sequence Length = 82352 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcc 86 ||||||||||||||||||||| Sbjct: 81192 gccgccgcctcctcctcgtcc 81172
>gb|AC023302.9| Homo sapiens chromosome 15, clone RP11-28H5, complete sequence Length = 151927 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Plus Query: 16 ttcttcctctcgtctcctcctctcc 40 ||||||||||| ||||||||||||| Sbjct: 46317 ttcttcctctcttctcctcctctcc 46341
>gb|AC027808.9| Homo sapiens chromosome 15, clone RP11-351M8, complete sequence Length = 221936 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Minus Query: 16 ttcttcctctcgtctcctcctctcc 40 ||||||||||| ||||||||||||| Sbjct: 20944 ttcttcctctcttctcctcctctcc 20920
>ref|XM_691397.1| PREDICTED: Danio rerio similar to bromo domain-containing protein disrupted in leukemia (LOC568089), mRNA Length = 6144 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtc 85 ||||||||||||||||||||| Sbjct: 4581 ggccgccgcctcctcctcgtc 4561
>emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 in linkage group 15, complete sequence Length = 205794 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ggccgccgcctcctcctcgtc 85 ||||||||||||||||||||| Sbjct: 170163 ggccgccgcctcctcctcgtc 170183
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tggccgccgcctcctcctcgtcccc 88 ||||||||||| ||||||||||||| Sbjct: 11129798 tggccgccgccgcctcctcgtcccc 11129822
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tggccgccgcctcctcctcgtcccc 88 |||||||||||||| |||||||||| Sbjct: 18961467 tggccgccgcctccacctcgtcccc 18961443
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 tcttcttcctctcgtctcctcctct 38 |||||||||||||||||| |||||| Sbjct: 6558010 tcttcttcctctcgtctcgtcctct 6557986 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 atggccgccgcctcctcctc 82 |||||||||||||||||||| Sbjct: 28098284 atggccgccgcctcctcctc 28098265 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 27814328 ccgccgcctcctcctcgtcc 27814309 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccgcctcctcctcgtcccct 89 |||||||||||||||||||| Sbjct: 18775637 ccgcctcctcctcgtcccct 18775656
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtcc 86 ||||||||||||||||||||| Sbjct: 29216798 gccgccgcctcctcctcgtcc 29216818 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtcc 86 ||||||||||||||||||||| Sbjct: 6742766 gccgccgcctcctcctcgtcc 6742786 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 31304445 gccgccgcctcctcctcgtc 31304464 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 gccgcctcctcctcgtcccc 88 |||||||||||||||||||| Sbjct: 14523435 gccgcctcctcctcgtcccc 14523454 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cctctcgtctcctcctctcc 40 |||||||||||||||||||| Sbjct: 6899264 cctctcgtctcctcctctcc 6899283
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tggccgccgcctcctcctcgtcccc 88 ||||||||||| ||||||||||||| Sbjct: 9471557 tggccgccgccgcctcctcgtcccc 9471581 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcccct 89 |||||||||||||||||| ||||| Sbjct: 34774537 gccgccgcctcctcctcgccccct 34774514 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtcccctcctc 93 ||||||||||||||||| || ||||||| Sbjct: 29490958 gccgccgcctcctcctcctctcctcctc 29490985 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcccct 89 ||||||||||||||||| |||||| Sbjct: 6671929 gccgccgcctcctcctcctcccct 6671906 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccatggccgccgcctcctcc 80 |||||||||||||||||||| Sbjct: 1187572 ccatggccgccgcctcctcc 1187591
>dbj|AP006436.1| Sus scrofa CC chemokine receptor genes(CCR3, CCR1, CCXCR1, FYCO1), complete and partial cds, clone: 0659A02 Length = 167298 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Plus Query: 58 cttccatggccgccgcctcctcctc 82 |||||||||||||| |||||||||| Sbjct: 150301 cttccatggccgcctcctcctcctc 150325
>dbj|AP006184.1| Sus scrofa CC chemokine receptor genes (CCR9, CXCR6, FYCO1), complete cds, clone: 0268F11 Length = 141824 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 cttccatggccgccgcctcctcctc 82 |||||||||||||| |||||||||| Sbjct: 133233 cttccatggccgcctcctcctcctc 133209
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tggccgccgcctcctcctcgtcccc 88 ||||||||||| ||||||||||||| Sbjct: 85118 tggccgccgccgcctcctcgtcccc 85142
>emb|AJ320497.1|HSA320497 Homo sapiens mRNA for axonemal beta heavy chain dynein type 11 (DNAH11 gene) Length = 13670 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 tggccgccgcctcctcctcgt 84 ||||||||||||||||||||| Sbjct: 173 tggccgccgcctcctcctcgt 153
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tggccgccgcctcctcctcgtcccc 88 |||||||||||||| |||||||||| Sbjct: 18887694 tggccgccgcctccacctcgtcccc 18887670
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 tggccgccgcctcctcctcgtcccc 88 |||||||||||||| |||||||||| Sbjct: 8912 tggccgccgcctccacctcgtcccc 8936
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 tggccgccgcctcctcctcgtcccc 88 |||||||||||||| |||||||||| Sbjct: 57584 tggccgccgcctccacctcgtcccc 57560
>gb|AY254899.1| Rhipicephalus appendiculatus actin (Act1) mRNA, complete cds Length = 1131 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ccgccgcctcctcctcgtccc 87 ||||||||||||||||||||| Sbjct: 689 ccgccgcctcctcctcgtccc 709
>gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, complete sequence Length = 174365 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 80035 ccgccgcctcctcctcgtcc 80054
>ref|NM_188352.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1872 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 44 gccgccgcctcctcctcgtc 63
>ref|XM_475188.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 855 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccgcctcctcctcgtcccct 89 |||||||||||||||||||| Sbjct: 564 ccgcctcctcctcgtcccct 583
>ref|XM_469866.1| Oryza sativa (japonica cultivar-group), mRNA Length = 687 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 395 gccgccgcctcctcctcgtc 376
>ref|XM_468345.1| Oryza sativa (japonica cultivar-group), mRNA Length = 171 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcccct 89 |||||||||||||||||| ||||| Sbjct: 88 gccgccgcctcctcctcgccccct 65
>ref|XM_467434.1| Oryza sativa (japonica cultivar-group), mRNA Length = 792 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcccctcctc 93 ||||||||||||||||| || ||||||| Sbjct: 106 gccgccgcctcctcctcctctcctcctc 79
>ref|XM_464678.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1587 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtcccct 89 ||||||||||||||||| |||||| Sbjct: 80 gccgccgcctcctcctcctcccct 103
>ref|XM_463927.1| Oryza sativa (japonica cultivar-group), mRNA Length = 444 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 ccatggccgccgcctcctcc 80 |||||||||||||||||||| Sbjct: 280 ccatggccgccgcctcctcc 261
>ref|XM_450915.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1457 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcccc 88 ||||||| |||||||||||||||| Sbjct: 927 ggccgcctcctcctcctcgtcccc 904
>ref|XM_477221.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1785 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 706 gccgccgcctcctcctcgtc 687
>gb|AC138197.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0055D24 map C535, complete sequence Length = 174759 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 61 ccatggccgccgcctcctcctcgtcccc 88 ||||||||||| |||||||||| ||||| Sbjct: 151483 ccatggccgcctcctcctcctcctcccc 151456
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 atggccgccgcctcctcctc 82 |||||||||||||||||||| Sbjct: 178449 atggccgccgcctcctcctc 178430
>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06, complete sequence Length = 160907 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 atggccgccgcctcctcctc 82 |||||||||||||||||||| Sbjct: 30959 atggccgccgcctcctcctc 30940
>ref|XM_366504.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02580.4) partial mRNA Length = 1128 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 824 ccgccgcctcctcctcgtcc 805
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 44745 ccgccgcctcctcctcgtcc 44726
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01, complete sequence Length = 88352 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ccgcctcctcctcgtcccct 89 |||||||||||||||||||| Sbjct: 81040 ccgcctcctcctcgtcccct 81059
>gb|AC140921.2| Mus musculus BAC clone RP24-472I23 from chromosome 5, complete sequence Length = 181004 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 18484 ccgccgcctcctcctcgtcc 18465
>gb|AY554031.1| Oryza sativa (japonica cultivar-group) clone S6489 Hox19 (hox19) mRNA, partial cds Length = 440 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cctctcgtctcctcctctcc 40 |||||||||||||||||||| Sbjct: 76 cctctcgtctcctcctctcc 95
>ref|XM_983720.1| PREDICTED: Mus musculus round spermatid basic protein 1-like, transcript variant 1 (Rsbn1l), mRNA Length = 4136 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 1758 ccgccgcctcctcctcgtcc 1777
>ref|XM_983758.1| PREDICTED: Mus musculus round spermatid basic protein 1-like, transcript variant 2 (Rsbn1l), mRNA Length = 4043 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 1758 ccgccgcctcctcctcgtcc 1777
>ref|XM_918994.2| PREDICTED: Mus musculus round spermatid basic protein 1-like, transcript variant 4 (Rsbn1l), mRNA Length = 7233 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 4855 ccgccgcctcctcctcgtcc 4874
>ref|XM_380618.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00442.1) partial mRNA Length = 621 Score = 40.1 bits (20), Expect = 2.9 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 60 tccatggccgccgcctcctcctcgtcc-cctcctct 94 ||||| ||||||||||||||||| ||| |||||||| Sbjct: 375 tccatagccgccgcctcctcctcctcctcctcctct 340
>ref|XM_804077.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510053.10) partial mRNA Length = 621 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcccctcct 92 ||||||| |||| ||||||||||||||| Sbjct: 372 ggccgcctcctcttcctcgtcccctcct 345
>ref|XM_806970.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511321.60) partial mRNA Length = 621 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcccctcct 92 ||||||| |||| ||||||||||||||| Sbjct: 372 ggccgcctcctcttcctcgtcccctcct 345
>gb|AC091617.2| Rattus norvegicus strain Brown Norway clone RP31-371K3, complete sequence Length = 150494 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gcctcctcctcgtcccctcc 91 |||||||||||||||||||| Sbjct: 31461 gcctcctcctcgtcccctcc 31442
>gb|AC091514.2| Rattus norvegicus strain Brown Norway clone RP31-223K12, complete sequence Length = 148370 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gcctcctcctcgtcccctcc 91 |||||||||||||||||||| Sbjct: 145746 gcctcctcctcgtcccctcc 145727
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gccgcctcctcctcgtcccc 88 |||||||||||||||||||| Sbjct: 129247 gccgcctcctcctcgtcccc 129228
>ref|XM_775966.1| PREDICTED: Strongylocentrotus purpuratus similar to CG10958-PA (LOC575574), mRNA Length = 1377 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gccgcctcctcctcgtcccc 88 |||||||||||||||||||| Sbjct: 593 gccgcctcctcctcgtcccc 574
>ref|XM_775906.1| PREDICTED: Strongylocentrotus purpuratus similar to CG10958-PA (LOC575509), mRNA Length = 2016 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gccgcctcctcctcgtcccc 88 |||||||||||||||||||| Sbjct: 1232 gccgcctcctcctcgtcccc 1213
>emb|X56033.1|TAMDH Thermus aquaticus sucD and mdh genes for succinyl-CoA synthetase alpha-subunit and malate dehydrogenase (EC 1.1.1.37) Length = 3205 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 742 gccgccgcctcctcctcgtc 723
>emb|X54073.1|TFSCSAB T.flavus scsA and scsB genes for succinyl-CoA synthetase alpha and beta subunits and mdh gene for malate dehydrogenase Length = 4556 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 3179 gccgccgcctcctcctcgtc 3160
>gb|AC044860.11| Homo sapiens chromosome 15, clone RP11-561C5, complete sequence Length = 233775 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 123310 agattcccaccctcttcttc 123329
>gb|AC135995.7| Homo sapiens chromosome 15, clone RP13-608F4, complete sequence Length = 157246 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 156004 agattcccaccctcttcttc 155985 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 51332 agattcccaccctcttcttc 51351
>gb|AC135735.2| Homo sapiens chromosome 15, clone RP11-1270F20, complete sequence Length = 175310 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 161069 agattcccaccctcttcttc 161050 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 82123 agattcccaccctcttcttc 82104
>gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, complete sequence Length = 169125 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 131106 agattcccaccctcttcttc 131125
>gb|M35832.1|TTHSUCDA Thermus aquaticus succinyl-CoA synthetase alpha-subunit (sucD) gene, complete cds Length = 880 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 669 gccgccgcctcctcctcgtc 650
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete sequence Length = 141050 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 133151 gccgccgcctcctcctcgtc 133170
>gb|AC105290.3| Homo sapiens BAC clone RP11-750A13 from 4, complete sequence Length = 83684 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 ctcctcctcgtcccctcctctcag 97 ||||||||| |||||||||||||| Sbjct: 43741 ctcctcctcctcccctcctctcag 43718
>gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, complete sequence Length = 186812 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 31280 agattcccaccctcttcttc 31261
>dbj|AK096215.1| Homo sapiens cDNA FLJ38896 fis, clone NOVAR2000352 Length = 1579 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 atggccgccgcctcctcctc 82 |||||||||||||||||||| Sbjct: 760 atggccgccgcctcctcctc 741
>gb|AC108000.5| Homo sapiens chromosome 15, clone CTD-2116G1, complete sequence Length = 167587 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 155710 agattcccaccctcttcttc 155729
>gb|AC127482.10| Homo sapiens chromosome 15, clone CTD-2547M4, complete sequence Length = 193680 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 162223 agattcccaccctcttcttc 162204 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 83316 agattcccaccctcttcttc 83297
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 21170 gccgccgcctcctcctcgtc 21189
>gb|AD001502.1|CH19F21246 Homo sapiens DNA from chromosome 19-cosmid f21246, genomic sequence Length = 44679 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 atggccgccgcctcctcctc 82 |||||||||||||||||||| Sbjct: 34363 atggccgccgcctcctcctc 34382
>gb|AC005630.1| Homo sapiens PAC clone RP5-1129D5 from 15, complete sequence Length = 137699 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 88197 agattcccaccctcttcttc 88178
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 66266 gccgccgcctcctcctcgtc 66247
>gb|AC010725.5| Homo sapiens BAC clone RP11-156N7 from 15, complete sequence Length = 155351 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 70469 agattcccaccctcttcttc 70488
>gb|AC011295.3| Homo sapiens BAC clone RP11-96J23 from 15, complete sequence Length = 148698 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 128588 agattcccaccctcttcttc 128569 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 39955 agattcccaccctcttcttc 39936
>gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromosome ul, complete sequence Length = 212965 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 141945 gccgccgcctcctcctcgtc 141926
>ref|XM_689252.1| PREDICTED: Danio rerio similar to bromo domain-containing protein disrupted in leukemia (LOC565987), mRNA Length = 6303 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 4739 gccgccgcctcctcctcgtc 4720
>dbj|AK163124.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730015K04 product:unclassifiable, full insert sequence Length = 1995 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 557 ccgccgcctcctcctcgtcc 538
>gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromosome ul, complete sequence Length = 250495 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 71166 gccgccgcctcctcctcgtc 71147
>emb|BX855617.8| Zebrafish DNA sequence from clone DKEYP-123H10 in linkage group 1, complete sequence Length = 160094 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ctctcgtctcctcctctcca 41 |||||||||||||||||||| Sbjct: 87290 ctctcgtctcctcctctcca 87309
>gb|BC020055.1| Mus musculus RIKEN cDNA A630072M18 gene, mRNA (cDNA clone IMAGE:4014805), partial cds Length = 1822 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 379 ccgccgcctcctcctcgtcc 360
>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence Length = 157200 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 72245 agattcccaccctcttcttc 72264
>gb|AC012064.3|AC012064 Homo sapiens BAC clone RP11-123N1 from 15, complete sequence Length = 170520 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 150563 agattcccaccctcttcttc 150544
>emb|BX322550.7| Zebrafish DNA sequence from clone DKEY-202N14 in linkage group 5, complete sequence Length = 184426 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ttcccaccctcttcttcctc 24 |||||||||||||||||||| Sbjct: 64231 ttcccaccctcttcttcctc 64212
>gb|AC126339.6| Homo sapiens chromosome 15, clone RP13-98N21, complete sequence Length = 95499 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 81896 agattcccaccctcttcttc 81915
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 10425810 gccgccgcctcctcctcgtc 10425791
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tccatggccgccgcctcctcctcg 83 |||| ||||||||||||||||||| Sbjct: 16658565 tccacggccgccgcctcctcctcg 16658588 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccgccgcctcctcctcgtcccc 88 ||||||| |||||||||||||||| Sbjct: 13726587 ggccgcctcctcctcctcgtcccc 13726610
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 7848303 gccgccgcctcctcctcgtc 7848284
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cctcttcttcctctcgtctc 31 |||||||||||||||||||| Sbjct: 21534212 cctcttcttcctctcgtctc 21534193 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 ccaccctcttcttcctctcgtctc 31 |||||| ||||||||||||||||| Sbjct: 6788703 ccacccccttcttcctctcgtctc 6788680
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 5829721 gccgccgcctcctcctcgtc 5829702
>gb|AC110771.3| Homo sapiens BAC clone RP11-173M11 from 4, complete sequence Length = 167429 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 cctctcgtctcctcctctccacac 44 |||||| ||||||||||||||||| Sbjct: 29157 cctctcctctcctcctctccacac 29134
>gb|AC146099.3| Pan troglodytes BAC clone RP43-5L2 from chromosome 7, complete sequence Length = 196770 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 160767 agattcccaccctcttcttc 160748
>gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene region, part 1 of 2 Length = 180000 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tccatggccgccgcctcctc 79 |||||||||||||||||||| Sbjct: 166819 tccatggccgccgcctcctc 166800
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 gccgcctcctcctcgtcccc 88 |||||||||||||||||||| Sbjct: 12921 gccgcctcctcctcgtcccc 12902
>gb|AC139425.3| Homo sapiens chromosome 15, clone RP13-996F3, complete sequence Length = 132528 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 111625 agattcccaccctcttcttc 111644
>gb|AC136698.6| Homo sapiens chromosome 15, clone RP13-262C2, complete sequence Length = 169605 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 agattcccaccctcttcttc 21 |||||||||||||||||||| Sbjct: 113082 agattcccaccctcttcttc 113063
>gb|AC105927.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1781E12, complete sequence Length = 120392 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cctctcgtctcctcctctcc 40 |||||||||||||||||||| Sbjct: 97302 cctctcgtctcctcctctcc 97321
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cctctcgtctcctcctctcc 40 |||||||||||||||||||| Sbjct: 67966 cctctcgtctcctcctctcc 67985
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 33462 gccgccgcctcctcctcgtc 33443
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 499793 gccgccgcctcctcctcgtc 499812
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcccct 89 |||||||||||||||||| ||||| Sbjct: 92385 gccgccgcctcctcctcgccccct 92362
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtcccctcctc 93 ||||||||||||||||| || ||||||| Sbjct: 85988 gccgccgcctcctcctcctctcctcctc 86015
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 tccatggccgccgcctcctc 79 |||||||||||||||||||| Sbjct: 2045304 tccatggccgccgcctcctc 2045285
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 cctcttcttcctctcgtctc 31 |||||||||||||||||||| Sbjct: 91396 cctcttcttcctctcgtctc 91377
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccatggccgccgcctcctcc 80 |||||||||||||||||||| Sbjct: 18663 ccatggccgccgcctcctcc 18682
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0047B10 Length = 158798 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tccatggccgccgcctcctcctcg 83 |||| ||||||||||||||||||| Sbjct: 7259 tccacggccgccgcctcctcctcg 7282
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1596_C06 Length = 124721 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 tccatggccgccgcctcctcctcg 83 |||| ||||||||||||||||||| Sbjct: 66704 tccacggccgccgcctcctcctcg 66727
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 ccaccctcttcttcctctcgtctc 31 |||||| ||||||||||||||||| Sbjct: 118382 ccacccccttcttcctctcgtctc 118359
>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0523A04 Length = 149049 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 97301 gccgccgcctcctcctcgtc 97282
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 ggccgccgcctcctcctcgtcccc 88 ||||||| |||||||||||||||| Sbjct: 124701 ggccgcctcctcctcctcgtcccc 124724
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcccct 89 ||||||||||||||||| |||||| Sbjct: 106304 gccgccgcctcctcctcctcccct 106281
>emb|BX005217.5| Zebrafish DNA sequence from clone CH211-87L3 in linkage group 15, complete sequence Length = 154452 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 90235 gccgccgcctcctcctcgtc 90216
>dbj|AK122079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N05, full insert sequence Length = 1621 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcccc 88 ||||||| |||||||||||||||| Sbjct: 1120 ggccgcctcctcctcctcgtcccc 1097
>dbj|AK120626.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152N11, full insert sequence Length = 1518 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 atggccgccgcctcctcctc 82 |||||||||||||||||||| Sbjct: 31 atggccgccgcctcctcctc 50
>dbj|AK099793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097E23, full insert sequence Length = 2712 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 276 ccgccgcctcctcctcgtcc 257
>dbj|AK108604.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G01, full insert sequence Length = 997 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 504 gccgccgcctcctcctcgtc 485
>dbj|AK107471.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B04, full insert sequence Length = 1785 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 706 gccgccgcctcctcctcgtc 687
>dbj|AK105197.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-G03, full insert sequence Length = 791 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtcccctcctc 93 ||||||||||||||||| || ||||||| Sbjct: 106 gccgccgcctcctcctcctctcctcctc 79
>dbj|AK103341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126B18, full insert sequence Length = 2279 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 114 gccgccgcctcctcctcgtc 133
>dbj|AK100924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134E03, full insert sequence Length = 2249 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 61 ccatggccgccgcctcctcctcgtcccc 88 ||||||||||| |||||||||| ||||| Sbjct: 66 ccatggccgcctcctcctcctcctcccc 93
>dbj|AK100912.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132O20, full insert sequence Length = 2249 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 61 ccatggccgccgcctcctcctcgtcccc 88 ||||||||||| |||||||||| ||||| Sbjct: 66 ccatggccgcctcctcctcctcctcccc 93
>dbj|AK100855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123K21, full insert sequence Length = 1209 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 61 ccatggccgccgcctcctcctcgtcccc 88 ||||||||||| |||||||||| ||||| Sbjct: 66 ccatggccgcctcctcctcctcctcccc 93
>dbj|AK072526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126A08, full insert sequence Length = 1587 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtcccct 89 ||||||||||||||||| |||||| Sbjct: 80 gccgccgcctcctcctcctcccct 103
>dbj|AK067365.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102M20, full insert sequence Length = 1647 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 atggccgccgcctcctcctc 82 |||||||||||||||||||| Sbjct: 3 atggccgccgcctcctcctc 22
>dbj|AK061450.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-E05, full insert sequence Length = 1509 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 atggccgccgcctcctcctc 82 |||||||||||||||||||| Sbjct: 22 atggccgccgcctcctcctc 41
>dbj|AK060495.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-E08, full insert sequence Length = 1457 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 65 ggccgccgcctcctcctcgtcccc 88 ||||||| |||||||||||||||| Sbjct: 927 ggccgcctcctcctcctcgtcccc 904
>gb|AY104213.1| Zea mays PCO115683 mRNA sequence Length = 945 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 ccatggccgccgcctcctcc 80 |||||||||||||||||||| Sbjct: 174 ccatggccgccgcctcctcc 193
>gb|DQ333392.1| Elk herpesvirus glycoprotein D gene, complete cds Length = 1467 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 917 ccgccgcctcctcctcgtcc 898
>gb|AC157563.12| Mus musculus chromosome 7, clone RP23-414I24, complete sequence Length = 200040 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 ccctcttcttcctctcgtctcctc 34 |||||||||||||||| ||||||| Sbjct: 122383 ccctcttcttcctctcctctcctc 122360
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 10431849 gccgccgcctcctcctcgtc 10431830
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 150281 gccgccgcctcctcctcgtc 150300
>emb|AL833794.9| Mouse DNA sequence from clone RP23-401J24 on chromosome 2, complete sequence Length = 206549 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tcctctcgtctcctcctctc 39 |||||||||||||||||||| Sbjct: 83381 tcctctcgtctcctcctctc 83362
>gb|J02598.1|TTHMDHF T.flavus mdh gene encoding malate dehydrogenase, complete cds Length = 1771 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gccgccgcctcctcctcgtc 85 |||||||||||||||||||| Sbjct: 394 gccgccgcctcctcctcgtc 375
>dbj|AB071290.1| Oryza sativa OsETTIN1 mRNA for Arabidopsis ETTIN-like protein 1, complete cds Length = 2622 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccgccgcctcctcctcgtcc 86 |||||||||||||||||||| Sbjct: 168 ccgccgcctcctcctcgtcc 149 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,325,320 Number of Sequences: 3902068 Number of extensions: 2325320 Number of successful extensions: 77692 Number of sequences better than 10.0: 153 Number of HSP's better than 10.0 without gapping: 167 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 74897 Number of HSP's gapped (non-prelim): 2769 length of query: 229 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 207 effective length of database: 17,147,199,772 effective search space: 3549470352804 effective search space used: 3549470352804 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
