ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genom... 194 1e-46
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 194 1e-46
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 194 1e-46
4dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 1e-46
5ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA 109 6e-21
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 109 6e-21
7dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic D... 109 6e-21
8dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 6e-21
9ref|XM_468996.1| Oryza sativa (japonica cultivar-group), mRNA 66 8e-08
10gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 66 8e-08
11dbj|AK109350.2| Oryza sativa (japonica cultivar-group) cDNA clon... 66 8e-08
12dbj|AK105732.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 8e-08
13dbj|AK068135.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 8e-08
14ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA 54 3e-04
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
16dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
17dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
18dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
19dbj|AK061561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
20ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predic... 50 0.005
21gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.005
22dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
23gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 50 0.005
24ref|NM_193983.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
25gb|BC017188.2| Homo sapiens KIAA0683 gene product, mRNA (cDNA cl... 42 1.2
26ref|XM_743953.1| Aspergillus fumigatus Af293 hypothetical protei... 42 1.2
27gb|BC028332.1| Homo sapiens KIAA0683 gene product, mRNA (cDNA cl... 42 1.2
28emb|AL031705.25|HS305C8 Human DNA sequence from clone LA16c-305C... 42 1.2
29gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 42 1.2
30emb|AL137394.1|HSM802087 Homo sapiens mRNA; cDNA DKFZp434I062 (f... 42 1.2
31emb|AL080126.1|HSM800636 Homo sapiens mRNA; cDNA DKFZp434A073 (f... 42 1.2
32ref|NM_016111.1| Homo sapiens KIAA0683 gene product (KIAA0683), ... 42 1.2
33emb|CR599116.1| full-length cDNA clone CS0DL002YF18 of B cells (... 42 1.2
34dbj|AK001786.1| Homo sapiens cDNA FLJ10924 fis, clone OVARC10004... 42 1.2
35dbj|AB014583.3| Homo sapiens mRNA for KIAA0683 protein, partial cds 42 1.2
36dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
37ref|XM_320018.2| Anopheles gambiae str. PEST ENSANGP00000010492 ... 42 1.2
38dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
39gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipie... 42 1.2
40ref|NM_190140.1| Oryza sativa (japonica cultivar-group), predic... 40 4.7
41ref|XM_370239.1| Magnaporthe grisea 70-15 chromosome II hypothet... 40 4.7
42gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 4.7
43emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 4.7
44emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 40 4.7
45gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.7
46dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
47dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
48dbj|AK121636.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
49dbj|AK119529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
50dbj|AK065286.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.7
51gb|AY109232.1| Zea mays PCO115240 mRNA sequence 40 4.7
52gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.7 
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete
             sequence
          Length = 141582

 Score =  194 bits (98), Expect = 1e-46
 Identities = 161/182 (88%)
 Strand = Plus / Plus

                                                                         
Query: 167   gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 98169 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 98228

                                                                         
Query: 227   ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 286
               || ||||||||| || || ||||||| ||||| ||| || | ||||||  || | | |
Sbjct: 98229 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 98288

                                                                         
Query: 287   gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 346
             |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 98289 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 98348

               
Query: 347   ac 348
             ||
Sbjct: 98349 ac 98350
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  194 bits (98), Expect = 1e-46
 Identities = 161/182 (88%)
 Strand = Plus / Minus

                                                                            
Query: 167      gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 32781372 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 32781313

                                                                            
Query: 227      ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 286
                  || ||||||||| || || ||||||| ||||| ||| || | ||||||  || | | |
Sbjct: 32781312 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 32781253

                                                                            
Query: 287      gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 346
                |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 32781252 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 32781193

                  
Query: 347      ac 348
                ||
Sbjct: 32781192 ac 32781191



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                            
Query: 167      gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
                |||||||||||| | ||||||   |||| |||||||||||| ||||||||||||||||||
Sbjct: 24290049 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 24289990

                 
Query: 227      g 227
                |
Sbjct: 24289989 g 24289989



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 311      gccggcgtcgacctcaaccacggcgac 337
                |||||||||||||||||||||||||||
Sbjct: 24289905 gccggcgtcgacctcaaccacggcgac 24289879
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  194 bits (98), Expect = 1e-46
 Identities = 161/182 (88%)
 Strand = Plus / Minus

                                                                            
Query: 167      gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 32871882 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 32871823

                                                                            
Query: 227      ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 286
                  || ||||||||| || || ||||||| ||||| ||| || | ||||||  || | | |
Sbjct: 32871822 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 32871763

                                                                            
Query: 287      gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 346
                |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 32871762 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 32871703

                  
Query: 347      ac 348
                ||
Sbjct: 32871702 ac 32871701



 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                            
Query: 167      gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
                |||||||||||| | ||||||   |||| |||||||||||| ||||||||||||||||||
Sbjct: 24207518 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 24207459

                 
Query: 227      g 227
                |
Sbjct: 24207458 g 24207458



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 311      gccggcgtcgacctcaaccacggcgac 337
                |||||||||||||||||||||||||||
Sbjct: 24207374 gccggcgtcgacctcaaccacggcgac 24207348
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>dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A10, full
           insert sequence
          Length = 1408

 Score =  194 bits (98), Expect = 1e-46
 Identities = 161/182 (88%)
 Strand = Plus / Plus

                                                                       
Query: 167 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 316

                                                                       
Query: 227 ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 286
             || ||||||||| || || ||||||| ||||| ||| || | ||||||  || | | |
Sbjct: 317 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 376

                                                                       
Query: 287 gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 346
           |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 377 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 436

             
Query: 347 ac 348
           ||
Sbjct: 437 ac 438
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>ref|XM_476821.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1301

 Score =  109 bits (55), Expect = 6e-21
 Identities = 172/211 (81%)
 Strand = Plus / Plus

                                                                       
Query: 134 cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 193
           |||||||| || |||| ||| ||||||||||  |||||||||||||||||||||||   |
Sbjct: 158 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 217

                                                                       
Query: 194 cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 253
           ||   | |||||||||||||||||||||| || |||   |||||||||||||| ||||||
Sbjct: 218 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 277

                                                                       
Query: 254 gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 313
             ||||| ||| |||| ||||||  |  | |  ||||||||||||||   | | || |||
Sbjct: 278 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 337

                                          
Query: 314 ggcgtcgacctcaaccacggcgacctggccg 344
           ||| |||||||||||||||||||||| ||||
Sbjct: 338 ggcatcgacctcaaccacggcgacctcgccg 368
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  109 bits (55), Expect = 6e-21
 Identities = 172/211 (81%)
 Strand = Plus / Minus

                                                                           
Query: 134     cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 193
               |||||||| || |||| ||| ||||||||||  |||||||||||||||||||||||   |
Sbjct: 4062848 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 4062789

                                                                           
Query: 194     cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 253
               ||   | |||||||||||||||||||||| || |||   |||||||||||||| ||||||
Sbjct: 4062788 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 4062729

                                                                           
Query: 254     gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 313
                 ||||| ||| |||| ||||||  |  | |  ||||||||||||||   | | || |||
Sbjct: 4062728 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 4062669

                                              
Query: 314     ggcgtcgacctcaaccacggcgacctggccg 344
               ||| |||||||||||||||||||||| ||||
Sbjct: 4062668 ggcatcgacctcaaccacggcgacctcgccg 4062638
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>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534H07
          Length = 144689

 Score =  109 bits (55), Expect = 6e-21
 Identities = 172/211 (81%)
 Strand = Plus / Minus

                                                                         
Query: 134   cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 193
             |||||||| || |||| ||| ||||||||||  |||||||||||||||||||||||   |
Sbjct: 55706 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 55647

                                                                         
Query: 194   cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 253
             ||   | |||||||||||||||||||||| || |||   |||||||||||||| ||||||
Sbjct: 55646 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 55587

                                                                         
Query: 254   gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 313
               ||||| ||| |||| ||||||  |  | |  ||||||||||||||   | | || |||
Sbjct: 55586 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 55527

                                            
Query: 314   ggcgtcgacctcaaccacggcgacctggccg 344
             ||| |||||||||||||||||||||| ||||
Sbjct: 55526 ggcatcgacctcaaccacggcgacctcgccg 55496
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>dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D11, full
           insert sequence
          Length = 1302

 Score =  109 bits (55), Expect = 6e-21
 Identities = 172/211 (81%)
 Strand = Plus / Plus

                                                                       
Query: 134 cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 193
           |||||||| || |||| ||| ||||||||||  |||||||||||||||||||||||   |
Sbjct: 158 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 217

                                                                       
Query: 194 cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 253
           ||   | |||||||||||||||||||||| || |||   |||||||||||||| ||||||
Sbjct: 218 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 277

                                                                       
Query: 254 gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 313
             ||||| ||| |||| ||||||  |  | |  ||||||||||||||   | | || |||
Sbjct: 278 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 337

                                          
Query: 314 ggcgtcgacctcaaccacggcgacctggccg 344
           ||| |||||||||||||||||||||| ||||
Sbjct: 338 ggcatcgacctcaaccacggcgacctcgccg 368
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>ref|XM_468996.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1447

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 167 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
           |||||||||||| | ||||||   |||| |||||||||||| ||||||||||||||||||
Sbjct: 252 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 311

            
Query: 227 g 227
           |
Sbjct: 312 g 312



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 311 gccggcgtcgacctcaaccacggcgac 337
           |||||||||||||||||||||||||||
Sbjct: 396 gccggcgtcgacctcaaccacggcgac 422
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>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                         
Query: 167   gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
             |||||||||||| | ||||||   |||| |||||||||||| ||||||||||||||||||
Sbjct: 90575 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 90634

              
Query: 227   g 227
             |
Sbjct: 90635 g 90635



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 311   gccggcgtcgacctcaaccacggcgac 337
             |||||||||||||||||||||||||||
Sbjct: 90719 gccggcgtcgacctcaaccacggcgac 90745
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>dbj|AK109350.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E06, full
           insert sequence
          Length = 1511

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 167 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
           |||||||||||| | ||||||   |||| |||||||||||| ||||||||||||||||||
Sbjct: 286 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 345

            
Query: 227 g 227
           |
Sbjct: 346 g 346



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 311 gccggcgtcgacctcaaccacggcgac 337
           |||||||||||||||||||||||||||
Sbjct: 430 gccggcgtcgacctcaaccacggcgac 456
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>dbj|AK105732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H06, full
           insert sequence
          Length = 1642

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 167 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
           |||||||||||| | ||||||   |||| |||||||||||| ||||||||||||||||||
Sbjct: 286 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 345

            
Query: 227 g 227
           |
Sbjct: 346 g 346



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 311 gccggcgtcgacctcaaccacggcgac 337
           |||||||||||||||||||||||||||
Sbjct: 430 gccggcgtcgacctcaaccacggcgac 456
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>dbj|AK068135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133O22, full
           insert sequence
          Length = 1451

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                       
Query: 167 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 226
           |||||||||||| | ||||||   |||| |||||||||||| ||||||||||||||||||
Sbjct: 282 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 341

            
Query: 227 g 227
           |
Sbjct: 342 g 342



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 311 gccggcgtcgacctcaaccacggcgac 337
           |||||||||||||||||||||||||||
Sbjct: 426 gccggcgtcgacctcaaccacggcgac 452
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>ref|XM_550392.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2207

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 311 gccggcgtcgacctcaaccacggcgac 337
           |||||||||||||||||||||||||||
Sbjct: 397 gccggcgtcgacctcaaccacggcgac 423
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                          
Query: 311     gccggcgtcgacctcaaccacggcgac 337
               |||||||||||||||||||||||||||
Sbjct: 4180017 gccggcgtcgacctcaaccacggcgac 4179991



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 238      cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 282
                ||||||||| |||||||||||| |||| ||  ||||||| |||||
Sbjct: 14422199 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 14422155



 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 173      gtggcgctgcaggcgctcaa 192
                ||||||||||||||||||||
Sbjct: 38127133 gtggcgctgcaggcgctcaa 38127114
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>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 311   gccggcgtcgacctcaaccacggcgac 337
             |||||||||||||||||||||||||||
Sbjct: 17984 gccggcgtcgacctcaaccacggcgac 17958
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>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0406H10
          Length = 156419

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                         
Query: 311    gccggcgtcgacctcaaccacggcgac 337
              |||||||||||||||||||||||||||
Sbjct: 126988 gccggcgtcgacctcaaccacggcgac 126962
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>dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A11, full
           insert sequence
          Length = 2207

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 311 gccggcgtcgacctcaaccacggcgac 337
           |||||||||||||||||||||||||||
Sbjct: 397 gccggcgtcgacctcaaccacggcgac 423
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>dbj|AK061561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D10, full
           insert sequence
          Length = 1122

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 311 gccggcgtcgacctcaaccacggcgac 337
           |||||||||||||||||||||||||||
Sbjct: 63  gccggcgtcgacctcaaccacggcgac 89
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>ref|XM_476068.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1245

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                       
Query: 208 cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 267
           ||||||||||||||| || | | |||||  ||||||||  ||||||||||||  ||| ||
Sbjct: 189 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 248

                    
Query: 268 cttctgcgc 276
           |||||||||
Sbjct: 249 cttctgcgc 257
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>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
              complete sequence
          Length = 145070

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                          
Query: 208    cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 267
              ||||||||||||||| || | | |||||  ||||||||  ||||||||||||  ||| ||
Sbjct: 125327 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 125268

                       
Query: 268    cttctgcgc 276
              |||||||||
Sbjct: 125267 cttctgcgc 125259
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                           
Query: 208     cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 267
               ||||||||||||||| || | | |||||  ||||||||  ||||||||||||  ||| ||
Sbjct: 4757322 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 4757263

                        
Query: 268     cttctgcgc 276
               |||||||||
Sbjct: 4757262 cttctgcgc 4757254
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
             complete sequence
          Length = 187956

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                         
Query: 208   cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 267
             ||||||||||||||| || | | |||||  ||||||||  ||||||||||||  ||| ||
Sbjct: 29730 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 29671

                      
Query: 268   cttctgcgc 276
             |||||||||
Sbjct: 29670 cttctgcgc 29662
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>ref|NM_193983.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1512

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 238 cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 282
           ||||||||| |||||||||||| |||| ||  ||||||| |||||
Sbjct: 276 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 320
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>gb|BC017188.2| Homo sapiens KIAA0683 gene product, mRNA (cDNA clone MGC:1356
            IMAGE:3139743), complete cds
          Length = 3115

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 129  cggagcagacggccgacaacagccc 153
            ||||| |||||||||||||||||||
Sbjct: 2376 cggaggagacggccgacaacagccc 2352
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>ref|XM_743953.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g04640)
           partial mRNA
          Length = 1605

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 173 gtggcgctgcaggcgctcaag 193
           |||||||||||||||||||||
Sbjct: 999 gtggcgctgcaggcgctcaag 979
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>gb|BC028332.1| Homo sapiens KIAA0683 gene product, mRNA (cDNA clone IMAGE:4509972)
          Length = 916

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 129 cggagcagacggccgacaacagccc 153
           ||||| |||||||||||||||||||
Sbjct: 145 cggaggagacggccgacaacagccc 121
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>emb|AL031705.25|HS305C8 Human DNA sequence from clone LA16c-305C8 on chromosome 16 Contains an
             RPS3A (40S ribosomal protein S3A) pseudogene, part of the
             gene for a novel protein similar to NPTX1 (neuronal
             pentraxin I), the gene DFKZP434A073 or KIAA0683 and the
             last exon of gene KIAA0590. Contains ESTs, STSs, GSSs and
             eight putative CpG islands, complete sequence
          Length = 42569

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 129   cggagcagacggccgacaacagccc 153
             ||||| |||||||||||||||||||
Sbjct: 35643 cggaggagacggccgacaacagccc 35619
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>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8
          Length = 279011

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 129    cggagcagacggccgacaacagccc 153
              ||||| |||||||||||||||||||
Sbjct: 177906 cggaggagacggccgacaacagccc 177882
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>emb|AL137394.1|HSM802087 Homo sapiens mRNA; cDNA DKFZp434I062 (from clone DKFZp434I062)
          Length = 3272

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 129  cggagcagacggccgacaacagccc 153
            ||||| |||||||||||||||||||
Sbjct: 2551 cggaggagacggccgacaacagccc 2527
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>emb|AL080126.1|HSM800636 Homo sapiens mRNA; cDNA DKFZp434A073 (from clone DKFZp434A073)
          Length = 3320

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 129  cggagcagacggccgacaacagccc 153
            ||||| |||||||||||||||||||
Sbjct: 2551 cggaggagacggccgacaacagccc 2527
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>ref|NM_016111.1| Homo sapiens KIAA0683 gene product (KIAA0683), mRNA
          Length = 3320

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 129  cggagcagacggccgacaacagccc 153
            ||||| |||||||||||||||||||
Sbjct: 2551 cggaggagacggccgacaacagccc 2527
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>emb|CR599116.1| full-length cDNA clone CS0DL002YF18 of B cells (Ramos cell line) Cot
            25-normalized of Homo sapiens (human)
          Length = 3148

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 129  cggagcagacggccgacaacagccc 153
            ||||| |||||||||||||||||||
Sbjct: 2481 cggaggagacggccgacaacagccc 2457
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>dbj|AK001786.1| Homo sapiens cDNA FLJ10924 fis, clone OVARC1000443, highly similar to
            Homo sapiens mRNA; cDNA DKFZp434A073
          Length = 1757

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 129  cggagcagacggccgacaacagccc 153
            ||||| |||||||||||||||||||
Sbjct: 1056 cggaggagacggccgacaacagccc 1032
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>dbj|AB014583.3| Homo sapiens mRNA for KIAA0683 protein, partial cds
          Length = 3309

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 129  cggagcagacggccgacaacagccc 153
            ||||| |||||||||||||||||||
Sbjct: 2608 cggaggagacggccgacaacagccc 2584
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>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0025H06
          Length = 151547

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 238   cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 282
             ||||||||| |||||||||||| |||| ||  ||||||| |||||
Sbjct: 83596 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 83552
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>ref|XM_320018.2| Anopheles gambiae str. PEST ENSANGP00000010492
           (ENSANGG00000008003), partial mRNA
          Length = 1308

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 172 cgtggcgctgcaggcgctcaa 192
           |||||||||||||||||||||
Sbjct: 277 cgtggcgctgcaggcgctcaa 257
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>dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D10, full
           insert sequence
          Length = 1799

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 238 cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 282
           ||||||||| |||||||||||| |||| ||  ||||||| |||||
Sbjct: 369 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 413
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>gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipiens
            quinquefasciatus-3940126D9, complete sequence
          Length = 125236

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 178  gctgcaggcgctcaagcgcgccatcaccgacga 210
            |||||||| |||||| | |||||||||||||||
Sbjct: 3540 gctgcaggagctcaacctcgccatcaccgacga 3508
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>ref|NM_190140.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1596

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  gtggcgctgcaggcgctcaa 192
            ||||||||||||||||||||
Sbjct: 1477 gtggcgctgcaggcgctcaa 1496
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>ref|XM_370239.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
           (MG06736.4) partial mRNA
          Length = 3798

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 cggcgtcgacctcaaccacg 332
           ||||||||||||||||||||
Sbjct: 444 cggcgtcgacctcaaccacg 463
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 108     cgtgctgccccgtgccgctgccgg 131
               |||||||||| |||||||||||||
Sbjct: 3128862 cgtgctgcccagtgccgctgccgg 3128885
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    ccacggcgacctggccggca 347
              ||||||||||||||||||||
Sbjct: 180402 ccacggcgacctggccggca 180383
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   accacggcgacctggccggc 346
             ||||||||||||||||||||
Sbjct: 32580 accacggcgacctggccggc 32599
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 309     tggccggcgtcgacctcaaccacggcgacctg 340
               |||||||  |||||||||||| ||||||||||
Sbjct: 1509286 tggccggaatcgacctcaaccgcggcgacctg 1509255
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>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0471B04
          Length = 138025

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   gtggcgctgcaggcgctcaa 192
             ||||||||||||||||||||
Sbjct: 95167 gtggcgctgcaggcgctcaa 95148
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>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0018C10
          Length = 200183

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   gtggcgctgcaggcgctcaa 192
             ||||||||||||||||||||
Sbjct: 46367 gtggcgctgcaggcgctcaa 46348
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>dbj|AK121636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051N12, full
            insert sequence
          Length = 1756

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  gtggcgctgcaggcgctcaa 192
            ||||||||||||||||||||
Sbjct: 1356 gtggcgctgcaggcgctcaa 1375
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>dbj|AK119529.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C05, full
            insert sequence
          Length = 1598

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  gtggcgctgcaggcgctcaa 192
            ||||||||||||||||||||
Sbjct: 1295 gtggcgctgcaggcgctcaa 1314
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>dbj|AK065286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M14, full
            insert sequence
          Length = 1618

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  gtggcgctgcaggcgctcaa 192
            ||||||||||||||||||||
Sbjct: 1356 gtggcgctgcaggcgctcaa 1375
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>gb|AY109232.1| Zea mays PCO115240 mRNA sequence
          Length = 1756

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  gtggcgctgcaggcgctcaa 192
            ||||||||||||||||||||
Sbjct: 1328 gtggcgctgcaggcgctcaa 1347
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 327     accacggcgacctggccggc 346
               ||||||||||||||||||||
Sbjct: 2644850 accacggcgacctggccggc 2644869


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,646,954
Number of Sequences: 3902068
Number of extensions: 1646954
Number of successful extensions: 31827
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31188
Number of HSP's gapped (non-prelim): 639
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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