ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet97g04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_481582.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1684 Score = 123 bits (62), Expect = 3e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 121 ggcggcggaggggtacaacatcaccaagatcctgggcgagtacccggagtactcgcagtt 180 ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 221 ggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagtt 280 Query: 181 caacaagctgctcacgcagacgcggctggc 210 |||||||||||| || ||||||||||||| Sbjct: 281 caacaagctgctgacagagacgcggctggc 310
>ref|XM_507190.1| PREDICTED Oryza sativa (japonica cultivar-group), P0005C02.108 mRNA Length = 1759 Score = 123 bits (62), Expect = 3e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 121 ggcggcggaggggtacaacatcaccaagatcctgggcgagtacccggagtactcgcagtt 180 ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 264 ggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagtt 323 Query: 181 caacaagctgctcacgcagacgcggctggc 210 |||||||||||| || ||||||||||||| Sbjct: 324 caacaagctgctgacagagacgcggctggc 353
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 123 bits (62), Expect = 3e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 121 ggcggcggaggggtacaacatcaccaagatcctgggcgagtacccggagtactcgcagtt 180 ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 13980617 ggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagtt 13980558 Query: 181 caacaagctgctcacgcagacgcggctggc 210 |||||||||||| || ||||||||||||| Sbjct: 13980557 caacaagctgctgacagagacgcggctggc 13980528 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 26640835 gcggcggcgggcggcggagggg 26640814 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 20695315 gcggcggcgggcggcggagg 20695334 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 8382689 ggcgcggcggcgggcggcgg 8382708 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 7816644 ggcgcggcggcgggcggcgg 7816625
>dbj|AP004554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0005C02 Length = 62423 Score = 123 bits (62), Expect = 3e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 121 ggcggcggaggggtacaacatcaccaagatcctgggcgagtacccggagtactcgcagtt 180 ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 34940 ggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagtt 34881 Query: 181 caacaagctgctcacgcagacgcggctggc 210 |||||||||||| || ||||||||||||| Sbjct: 34880 caacaagctgctgacagagacgcggctggc 34851
>dbj|AP004661.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0048E12 Length = 152543 Score = 123 bits (62), Expect = 3e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 121 ggcggcggaggggtacaacatcaccaagatcctgggcgagtacccggagtactcgcagtt 180 ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 12508 ggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagtt 12449 Query: 181 caacaagctgctcacgcagacgcggctggc 210 |||||||||||| || ||||||||||||| Sbjct: 12448 caacaagctgctgacagagacgcggctggc 12419
>dbj|AK119591.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D04, full insert sequence Length = 1666 Score = 123 bits (62), Expect = 3e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 121 ggcggcggaggggtacaacatcaccaagatcctgggcgagtacccggagtactcgcagtt 180 ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 203 ggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagtt 262 Query: 181 caacaagctgctcacgcagacgcggctggc 210 |||||||||||| || ||||||||||||| Sbjct: 263 caacaagctgctgacagagacgcggctggc 292
>dbj|AK119590.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D03, full insert sequence Length = 1725 Score = 123 bits (62), Expect = 3e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 121 ggcggcggaggggtacaacatcaccaagatcctgggcgagtacccggagtactcgcagtt 180 ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 226 ggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagtt 285 Query: 181 caacaagctgctcacgcagacgcggctggc 210 |||||||||||| || ||||||||||||| Sbjct: 286 caacaagctgctgacagagacgcggctggc 315
>dbj|AK104404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C07, full insert sequence Length = 1682 Score = 123 bits (62), Expect = 3e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 121 ggcggcggaggggtacaacatcaccaagatcctgggcgagtacccggagtactcgcagtt 180 ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 219 ggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagtt 278 Query: 181 caacaagctgctcacgcagacgcggctggc 210 |||||||||||| || ||||||||||||| Sbjct: 279 caacaagctgctgacagagacgcggctggc 308
>dbj|AK068096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134F13, full insert sequence Length = 1759 Score = 123 bits (62), Expect = 3e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 121 ggcggcggaggggtacaacatcaccaagatcctgggcgagtacccggagtactcgcagtt 180 ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 264 ggcggcggaggggtacaacatcaccaagatcctcggggaccacccggagtactcgcagtt 323 Query: 181 caacaagctgctcacgcagacgcggctggc 210 |||||||||||| || ||||||||||||| Sbjct: 324 caacaagctgctgacagagacgcggctggc 353
>ref|XM_468336.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1400 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Minus Query: 100 gacgatggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||| ||||||||| Sbjct: 484 gacgatggaggcgcggcggtgggcggcgg 456
>ref|XM_507036.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1116_E04.11 mRNA Length = 1531 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Minus Query: 100 gacgatggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||| ||||||||| Sbjct: 611 gacgatggaggcgcggcggtgggcggcgg 583
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Minus Query: 100 gacgatggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||| ||||||||| Sbjct: 34693514 gacgatggaggcgcggcggtgggcggcgg 34693486 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 5600729 ggaggcgcggcggcgggcggcgg 5600751 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tttcagtggtgctgcccagct 31 ||||||||||||||||||||| Sbjct: 35240001 tttcagtggtgctgcccagct 35239981 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcg 127 ||||||||||||||||||||| Sbjct: 18210439 gaggcgcggcggcgggcggcg 18210419 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcgg 125 |||||||||||||||||||| Sbjct: 33000013 ggaggcgcggcggcgggcgg 32999994
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Minus Query: 100 gacgatggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||| ||||||||| Sbjct: 11362 gacgatggaggcgcggcggtgggcggcgg 11334
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Minus Query: 100 gacgatggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||| ||||||||| Sbjct: 50465 gacgatggaggcgcggcggtgggcggcgg 50437
>dbj|AK070982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075A01, full insert sequence Length = 1531 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Minus Query: 100 gacgatggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||| ||||||||| Sbjct: 611 gacgatggaggcgcggcggtgggcggcgg 583
>dbj|AK060976.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E09, full insert sequence Length = 1400 Score = 50.1 bits (25), Expect = 0.003 Identities = 28/29 (96%) Strand = Plus / Minus Query: 100 gacgatggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||| ||||||||| Sbjct: 484 gacgatggaggcgcggcggtgggcggcgg 456
>emb|AJ628018.2| Streptomyces sp. SCC 2136 deoxysugar biosynthetic gene cluster Length = 77550 Score = 48.1 bits (24), Expect = 0.012 Identities = 24/24 (100%) Strand = Plus / Minus Query: 137 aacatcaccaagatcctgggcgag 160 |||||||||||||||||||||||| Sbjct: 48098 aacatcaccaagatcctgggcgag 48075
>ref|XM_464508.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1693 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 122 ggaggcgcggcggcgggcggcgg 100
>tpg|BK000816.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M227, complete sequence Length = 1294 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 747 ggaggcgcggcggcgggcggcgg 769
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 5550079 ggaggcgcggcggcgggcggcgg 5550057 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 gaggcgcggcggcgggcggcgg 128 |||||||||||||||||||||| Sbjct: 24987358 gaggcgcggcggcgggcggcgg 24987379 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 14845422 ggcgcggcggcgggcggcgg 14845441
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 6890609 ggaggcgcggcggcgggcggcgg 6890587 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 gcgcggcggcgggcggcggagg 131 |||||||||||||||||||||| Sbjct: 9824716 gcgcggcggcgggcggcggagg 9824737 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 cgcggcggcgggcggcggagg 131 ||||||||||||||||||||| Sbjct: 4401422 cgcggcggcgggcggcggagg 4401402
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 5879078 ggaggcgcggcggcgggcggcgg 5879100
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 16505695 ggaggcgcggcggcgggcggcgg 16505717 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 13525890 ggaggcgcggcggcgggcggcgg 13525868 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 16505735 ggcgcggcggcgggcggcgg 16505754 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 9259303 gcggcggcgggcggcggagg 9259322
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 12868809 ggaggcgcggcggcgggcggcgg 12868787 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 6927081 gcggcggcgggcggcggagg 6927062
>dbj|AP005448.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0404G11 Length = 167623 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 146486 ggaggcgcggcggcgggcggcgg 146508 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 146526 ggcgcggcggcgggcggcgg 146545
>dbj|AP006528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0651G05 Length = 153258 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 70565 ggaggcgcggcggcgggcggcgg 70587
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 145464 ggaggcgcggcggcgggcggcgg 145486
>dbj|AP004325.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1230_H04 Length = 123818 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 41296 ggaggcgcggcggcgggcggcgg 41274
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 105573 ggaggcgcggcggcgggcggcgg 105551
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 28465 ggaggcgcggcggcgggcggcgg 28487
>dbj|AK099357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041G07, full insert sequence Length = 1692 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 121 ggaggcgcggcggcgggcggcgg 99
>dbj|AK067026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091H06, full insert sequence Length = 1718 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 123 ggaggcgcggcggcgggcggcgg 101
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 6890488 ggaggcgcggcggcgggcggcgg 6890466 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 110 gcgcggcggcgggcggcggagg 131 |||||||||||||||||||||| Sbjct: 9824601 gcgcggcggcgggcggcggagg 9824622 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 cgcggcggcgggcggcggagg 131 ||||||||||||||||||||| Sbjct: 4401403 cgcggcggcgggcggcggagg 4401383
>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144563 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 71429 ggaggcgcggcggcgggcggcgg 71451
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01, complete sequence Length = 162227 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 7286 ggaggcgcggcggcgggcggcgg 7264
>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01, complete sequence Length = 150283 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 104709 ggaggcgcggcggcgggcggcgg 104687
>dbj|AB033536.1| Oryza sativa (japonica cultivar-group) OsRPT4 mRNA for 26S proteasome regulatory particle triple-A ATPase subunit4, complete cds Length = 1637 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgg 128 ||||||||||||||||||||||| Sbjct: 122 ggaggcgcggcggcgggcggcgg 100
>ref|NM_189466.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 717 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 483 gcggcggcgggcggcggagggg 504
>ref|XM_470549.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4449 Score = 44.1 bits (22), Expect = 0.19 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 74 ggcgccgacgcacc-gaggacgaggaggacgatg 106 |||||||||||||| ||| ||||||||||||||| Sbjct: 702 ggcgccgacgcacccgagcacgaggaggacgatg 669
>ref|XM_473061.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1287 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 gaggcgcggcggcgggcggcgg 128 |||||||||||||||||||||| Sbjct: 141 gaggcgcggcggcgggcggcgg 162
>gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072P10, complete sequence Length = 147540 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 gacgaggaggacgatggaggcg 112 |||||||||||||||||||||| Sbjct: 36945 gacgaggaggacgatggaggcg 36924
>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041I05, complete sequence Length = 148785 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 gacgaggaggacgatggaggcg 112 |||||||||||||||||||||| Sbjct: 86861 gacgaggaggacgatggaggcg 86840
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.19 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 74 ggcgccgacgcacc-gaggacgaggaggacgatg 106 |||||||||||||| ||| ||||||||||||||| Sbjct: 4261835 ggcgccgacgcacccgagcacgaggaggacgatg 4261802 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcgcggcggcgggcggcggag 130 ||||||||||||||||||||| Sbjct: 21929374 gcgcggcggcgggcggcggag 21929394 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 aggcgcggcggcgggcggcggagg 131 ||||| |||||||||||||||||| Sbjct: 32102492 aggcgaggcggcgggcggcggagg 32102469
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02, complete sequence Length = 173171 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 gaggcgcggcggcgggcggcgg 128 |||||||||||||||||||||| Sbjct: 107943 gaggcgcggcggcgggcggcgg 107964
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 accgaggacgaggaggacgatg 106 |||||||||||||||||||||| Sbjct: 1268280 accgaggacgaggaggacgatg 1268259
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 gacgaggaggacgatggaggcg 112 |||||||||||||||||||||| Sbjct: 19681366 gacgaggaggacgatggaggcg 19681345
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.19 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 74 ggcgccgacgcacc-gaggacgaggaggacgatg 106 |||||||||||||| ||| ||||||||||||||| Sbjct: 4261950 ggcgccgacgcacccgagcacgaggaggacgatg 4261917 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcgcggcggcgggcggcggag 130 ||||||||||||||||||||| Sbjct: 21922403 gcgcggcggcgggcggcggag 21922423 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 aggcgcggcggcgggcggcggagg 131 ||||| |||||||||||||||||| Sbjct: 32193004 aggcgaggcggcgggcggcggagg 32192981
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 42897225 gcggcggcgggcggcggagggg 42897246 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 65231 ggcgcggcggcgggcggcgg 65250
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 90959 gcggcggcgggcggcggagggg 90980
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcgg 128 |||||||||||||||||||||| Sbjct: 3039468 gaggcgcggcggcgggcggcgg 3039447 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcggagggg 133 ||||||| ||||||||||||||||| Sbjct: 4821628 ggcgcgggggcgggcggcggagggg 4821652
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702C09 Length = 138203 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 52362 gcggcggcgggcggcggagggg 52341
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 189702 gcggcggcgggcggcggagggg 189681
>ref|XM_321674.2| Anopheles gambiae str. PEST ENSANGP00000009670 (ENSANGG00000007238), partial mRNA Length = 717 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 gcaccgaggacgaggaggacga 104 |||||||||||||||||||||| Sbjct: 193 gcaccgaggacgaggaggacga 172
>ref|NM_209769.1| Eremothecium gossypii ADR320Cp (ADR320C), mRNA Length = 831 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 accgaggacgaggaggacgatg 106 |||||||||||||||||||||| Sbjct: 628 accgaggacgaggaggacgatg 649
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 gaggcgcggcggcgggcggcgg 128 |||||||||||||||||||||| Sbjct: 115359 gaggcgcggcggcgggcggcgg 115380
>emb|X69348.1|HSRHFEF11 H.sapiens 28S rRNA V8 region (HFEF-11) Length = 760 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 624 gcggcggcgggcggcggagggg 645
>emb|X69353.1|HSRLAN56 H.sapiens 28S rRNA V8 region (LAN5-6) Length = 761 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 625 gcggcggcgggcggcggagggg 646
>emb|X69350.1|HSRHFEF7 H.sapiens 28S rRNA V8 region (HFEF-7) Length = 764 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 628 gcggcggcgggcggcggagggg 649
>emb|X69354.1|HSRHT29 H.sapiens 28S rRNA V8 region (HT29-5) Length = 770 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 634 gcggcggcgggcggcggagggg 655
>emb|X69345.1|HSRAMA7 H.sapiens 28S rRNA V8 region (AMA-7) Length = 768 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 632 gcggcggcgggcggcggagggg 653
>emb|X69342.1|HSRAMA3 H.sapiens 28S rRNA V8 region (AMA-3) Length = 767 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 631 gcggcggcgggcggcggagggg 652
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 gacgaggaggacgatggaggcg 112 |||||||||||||||||||||| Sbjct: 19967223 gacgaggaggacgatggaggcg 19967202
>emb|AL954870.3|CNS08CD9 Oryza sativa chromosome 12, . BAC OSJNBb0112E17 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140806 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 110 gcgcggcggcgggcggcggagg 131 |||||||||||||||||||||| Sbjct: 107754 gcgcggcggcgggcggcggagg 107733
>emb|X69341.1|HSRGE5 H.sapiens gene for 28S rRNA V8 region (genom-5) Length = 759 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 623 gcggcggcgggcggcggagggg 644
>gb|AC126223.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0076N15, complete sequence Length = 134307 Score = 44.1 bits (22), Expect = 0.19 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 74 ggcgccgacgcacc-gaggacgaggaggacgatg 106 |||||||||||||| ||| ||||||||||||||| Sbjct: 90450 ggcgccgacgcacccgagcacgaggaggacgatg 90417
>emb|X69364.1|HSRMRC58 H.sapiens 28S rRNA V8 region (MRC5-8) Length = 759 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 623 gcggcggcgggcggcggagggg 644
>emb|X69360.1|HSRLAN58 H.sapiens 28S rRNA V8 region (LAN5-8) Length = 759 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 623 gcggcggcgggcggcggagggg 644
>emb|X69359.1|HSRHT294 H.sapiens 28S rRNA V8 region (HT29-4) Length = 770 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 634 gcggcggcgggcggcggagggg 655
>emb|X69366.1|HSMRC5V22 H.sapiens 28S rRNA V8 region (MRC5V2-2) Length = 770 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 634 gcggcggcgggcggcggagggg 655
>emb|X69372.1|HSMRC510 H.sapiens 28S rRNA V8 region (MRC5-10) Length = 758 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 622 gcggcggcgggcggcggagggg 643
>emb|X69370.1|HSMRC51 H.sapiens 28S rRNA V8 region (MRC5-1) Length = 760 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagggg 133 |||||||||||||||||||||| Sbjct: 624 gcggcggcgggcggcggagggg 645
>ref|XM_465899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 710 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcg 127 ||||||||||||||||||||| Sbjct: 153 gaggcgcggcggcgggcggcg 133
>ref|XM_507486.1| PREDICTED Oryza sativa (japonica cultivar-group), P0047E05.32-1 mRNA Length = 1213 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcg 127 ||||||||||||||||||||| Sbjct: 169 gaggcgcggcggcgggcggcg 149
>ref|XM_506810.2| PREDICTED Oryza sativa (japonica cultivar-group), P0047E05.32-1 mRNA Length = 1229 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcg 127 ||||||||||||||||||||| Sbjct: 212 gaggcgcggcggcgggcggcg 192
>gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosome 9, complete sequence Length = 217074 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcgcggcggcgggcggcggag 130 ||||||||||||||||||||| Sbjct: 204592 gcgcggcggcgggcggcggag 204612
>emb|Z83844.5|HS37E16 Human DNA sequence from clone RP1-37E16 on chromosome 22 Contains the 3' part of the gene for a novel VHS domain containing protein similar to predicted worm and human proteins, the SH3BP1 gene for SH3-domain binding protein 1, the gene for a novel protein similar to nitrophenylphosphatases from various organisms, the LGALS1 gene for soluble galactoside-binding lectin 1, a novel gene and the gene for a novel protein similar to mouse RIP3 (P116 Rho-interacting protein) and rat RB109, complete sequence Length = 166181 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggc 126 ||||||||||||||||||||| Sbjct: 120235 ggaggcgcggcggcgggcggc 120255
>gb|BC022200.1| Homo sapiens TRIO and F-actin binding protein, mRNA (cDNA clone IMAGE:3356367) Length = 1734 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggc 126 ||||||||||||||||||||| Sbjct: 46 ggaggcgcggcggcgggcggc 66
>emb|AL136375.6| Human DNA sequence from clone RP11-95B22 on chromosome 1q31.1-31.3 Contains STSs and GSSs, complete sequence Length = 57629 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 cagtgatttttcagtggtgct 23 ||||||||||||||||||||| Sbjct: 55056 cagtgatttttcagtggtgct 55076
>gb|BT009355.1| Triticum aestivum clone wlm96.pk0020.d2:fis, full insert mRNA sequence Length = 1424 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggaggg 132 ||||||||||||||||||||| Sbjct: 104 gcggcggcgggcggcggaggg 124
>gb|AC079111.7| Homo sapiens chromosome 17, clone RP11-367G9, complete sequence Length = 163410 Score = 42.1 bits (21), Expect = 0.74 Identities = 24/25 (96%) Strand = Plus / Minus Query: 24 gcccagctcagtgctctccaccagt 48 |||||||||||||||||||| |||| Sbjct: 116104 gcccagctcagtgctctccatcagt 116080
>emb|CR621354.1| full-length cDNA clone CS0DE014YI19 of Placenta of Homo sapiens (human) Length = 1680 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggc 126 ||||||||||||||||||||| Sbjct: 5 ggaggcgcggcggcgggcggc 25
>ref|NM_138632.2| Homo sapiens TRIO and F-actin binding protein (TRIOBP), transcript variant 2, mRNA Length = 1743 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggc 126 ||||||||||||||||||||| Sbjct: 52 ggaggcgcggcggcgggcggc 72
>ref|NM_007032.5| Homo sapiens TRIO and F-actin binding protein (TRIOBP), transcript variant 1, mRNA Length = 4753 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggc 126 ||||||||||||||||||||| Sbjct: 52 ggaggcgcggcggcgggcggc 72
>gb|AF281030.1|AF281030 Homo sapiens Tara mRNA, complete cds Length = 2305 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 ggaggcgcggcggcgggcggc 126 ||||||||||||||||||||| Sbjct: 36 ggaggcgcggcggcgggcggc 56
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 caccgaggacgaggaggacga 104 ||||||||||||||||||||| Sbjct: 634039 caccgaggacgaggaggacga 634059
>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete sequence Length = 127210 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 gcgcggcggcgggcggcggag 130 ||||||||||||||||||||| Sbjct: 79642 gcgcggcggcgggcggcggag 79622
>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052M16 Length = 145423 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcg 127 ||||||||||||||||||||| Sbjct: 11652 gaggcgcggcggcgggcggcg 11632
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tttcagtggtgctgcccagct 31 ||||||||||||||||||||| Sbjct: 52051 tttcagtggtgctgcccagct 52031
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 tttcagtggtgctgcccagct 31 ||||||||||||||||||||| Sbjct: 135357 tttcagtggtgctgcccagct 135337
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0047E05 Length = 184323 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcg 127 ||||||||||||||||||||| Sbjct: 133840 gaggcgcggcggcgggcggcg 133820
>dbj|AK109669.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A09, full insert sequence Length = 1379 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcg 127 ||||||||||||||||||||| Sbjct: 165 gaggcgcggcggcgggcggcg 145
>dbj|AK098971.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078O19, full insert sequence Length = 1211 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcg 127 ||||||||||||||||||||| Sbjct: 167 gaggcgcggcggcgggcggcg 147
>dbj|AK070166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043G03, full insert sequence Length = 1229 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcg 127 ||||||||||||||||||||| Sbjct: 212 gaggcgcggcggcgggcggcg 192
>dbj|AK062534.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-E11, full insert sequence Length = 710 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 gaggcgcggcggcgggcggcg 127 ||||||||||||||||||||| Sbjct: 153 gaggcgcggcggcgggcggcg 133
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 aggcgcggcggcgggcggcgg 128 ||||||||||||||||||||| Sbjct: 354342 aggcgcggcggcgggcggcgg 354322
>emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa0042N11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168699 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cgcggcggcgggcggcggagg 131 ||||||||||||||||||||| Sbjct: 103074 cgcggcggcgggcggcggagg 103094
>emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa0056M17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 178147 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cgcggcggcgggcggcggagg 131 ||||||||||||||||||||| Sbjct: 50289 cgcggcggcgggcggcggagg 50309
>emb|CT009732.8| Mouse DNA sequence from clone RP23-72O20 on chromosome 9, complete sequence Length = 239257 Score = 42.1 bits (21), Expect = 0.74 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcgcggcggcgggcggcggag 130 ||||||||||||||||||||| Sbjct: 124449 gcgcggcggcgggcggcggag 124469
>gb|AC102766.5| Mus musculus chromosome 5, clone RP23-20L22, complete sequence Length = 203741 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tacaacatcaccaagatcct 153 |||||||||||||||||||| Sbjct: 132363 tacaacatcaccaagatcct 132382
>ref|XM_549808.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1182 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 507 ggcgcggcggcgggcggcgg 526
>ref|XM_482505.1| Oryza sativa (japonica cultivar-group), mRNA Length = 651 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 544 gcggcggcgggcggcggagg 525
>gb|DQ213384.1| Taeniopygia guttata clone 0063P0033C09 p32 subunit of splicing factor SF2-like mRNA, complete sequence Length = 1486 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 174 ggcgcggcggcgggcggcgg 155
>ref|XM_477318.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1145 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 62 gcggcggcgggcggcggagg 43
>ref|XM_506251.1| PREDICTED Oryza sativa (japonica cultivar-group), P0046D03.133 mRNA Length = 1209 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 63 gcggcggcgggcggcggagg 44
>gb|AY390526.1| Cricetulus griseus external transcribed spacer, 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 8240 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 cagtccgccccgccccatcccgagctcc 72 ||||||||||||||||| |||| ||||| Sbjct: 7306 cagtccgccccgccccaacccgggctcc 7279
>ref|NM_207212.1| Mus musculus WT1-interacting protein (Wtip), mRNA Length = 1979 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 158 gcggcggcgggcggcggagg 177
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cgaggacgaggaggacgatg 106 |||||||||||||||||||| Sbjct: 209588 cgaggacgaggaggacgatg 209607
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 gcaccgaggacgaggaggac 102 |||||||||||||||||||| Sbjct: 216649 gcaccgaggacgaggaggac 216668
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ttttcagtggtgctgcccag 29 |||||||||||||||||||| Sbjct: 2960631 ttttcagtggtgctgcccag 2960650
>gb|AC024776.1| Caenorhabditis elegans cosmid Y41D4B, complete sequence Length = 138020 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 92824 gcggcggcgggcggcggagg 92805
>gb|BC069184.1| Homo sapiens heterogeneous nuclear ribonucleoprotein L, mRNA (cDNA clone MGC:70802 IMAGE:6174088), complete cds Length = 2061 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 56 gcggcggcgggcggcggagg 75
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 caccgaggacgaggaggacgatgg 107 |||||| ||||||||||||||||| Sbjct: 121667 caccgacgacgaggaggacgatgg 121690
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 2886405 ggcgcggcggcgggcggcgg 2886386
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 101372 gcggcggcgggcggcggagg 101353
>gb|BC054125.1| Mus musculus WT1-interacting protein, mRNA (cDNA clone MGC:59612 IMAGE:6511230), complete cds Length = 1979 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 158 gcggcggcgggcggcggagg 177
>gb|BC027785.1| Mus musculus cold shock domain protein A, mRNA (cDNA clone MGC:35850 IMAGE:5345031), complete cds Length = 1676 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 99 ggcgcggcggcgggcggcgg 80
>ref|XM_580661.2| PREDICTED: Bos taurus similar to heterogeneous nuclear ribonucleoprotein L isoform a, transcript variant 1 (LOC504520), mRNA Length = 2385 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 115 gcggcggcgggcggcggagg 134
>gb|AC133902.12| Mus musculus chromosome 10, clone RP24-538B17, complete sequence Length = 199604 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 83518 ggcgcggcggcgggcggcgg 83537
>ref|NM_139117.2| Mus musculus cold shock domain protein A (Csda), mRNA Length = 1862 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 88 ggcgcggcggcgggcggcgg 69
>ref|NM_011733.2| Mus musculus cold shock domain protein A (Csda), mRNA Length = 1655 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 88 ggcgcggcggcgggcggcgg 69
>ref|NM_001533.2| Homo sapiens heterogeneous nuclear ribonucleoprotein L (HNRPL), transcript variant 1, mRNA Length = 2129 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 117 gcggcggcgggcggcggagg 136
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 15564 gcggcggcgggcggcggagg 15545
>ref|NM_031979.2| Rattus norvegicus cold shock domain protein A (Csda), mRNA Length = 1900 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 71 ggcgcggcggcgggcggcgg 52
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 1436103 ggcgcggcggcgggcggcgg 1436122
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 43770 ggcgcggcggcgggcggcgg 43751
>gb|AC115410.4| Rattus norvegicus 2 BAC CH230-46P5 (Children's Hospital Oakland Research Institute) complete sequence Length = 232501 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 61441 gcggcggcgggcggcggagg 61422
>ref|XM_849303.1| PREDICTED: Canis familiaris hypothetical protein LOC611616 (LOC611616), mRNA Length = 2289 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 499 gcggcggcgggcggcggagg 480
>ref|XM_567987.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNL04360) partial mRNA Length = 2262 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cgaggacgaggaggacgatg 106 |||||||||||||||||||| Sbjct: 243 cgaggacgaggaggacgatg 262
>gb|AC122191.4| Mus musculus BAC clone RP23-42J4 from 6, complete sequence Length = 250147 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 202733 ggcgcggcggcgggcggcgg 202752
>ref|XM_533677.2| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein L isoform a, transcript variant 1 (LOC476466), mRNA Length = 1847 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 110 gcggcggcgggcggcggagg 129
>ref|XM_848299.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein L isoform a, transcript variant 2 (LOC476466), mRNA Length = 2105 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 106 gcggcggcgggcggcggagg 125
>ref|XM_862189.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein L isoform a, transcript variant 5 (LOC476466), mRNA Length = 2136 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 110 gcggcggcgggcggcggagg 129
>ref|XM_862179.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein L isoform a, transcript variant 4 (LOC476466), mRNA Length = 1998 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 110 gcggcggcgggcggcggagg 129
>ref|XM_862166.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein L isoform a, transcript variant 3 (LOC476466), mRNA Length = 2107 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 111 gcggcggcgggcggcggagg 130
>emb|CR642743.2|CNS0EUWT Tetraodon nigroviridis full-length cDNA Length = 1043 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 147 gcggcggcgggcggcggagg 128
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 1498495 ggcgcggcggcgggcggcgg 1498514
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gttcaacaagctgctcacgc 197 |||||||||||||||||||| Sbjct: 3487299 gttcaacaagctgctcacgc 3487280
>gb|AC111653.8| Rattus norvegicus 2 BAC CH230-108E11 (Children's Hospital Oakland Research Institute) complete sequence Length = 247105 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 17417 gcggcggcgggcggcggagg 17436
>gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, complete sequence Length = 158066 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tacaacatcaccaagatcct 153 |||||||||||||||||||| Sbjct: 152863 tacaacatcaccaagatcct 152844
>emb|X16135.1|HSHNRNPL Human mRNA for novel heterogeneous nuclear RNP protein, L protein Length = 2033 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 41 gcggcggcgggcggcggagg 60
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 2747023 ggcgcggcggcgggcggcgg 2747042
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 3889372 ggcgcggcggcgggcggcgg 3889353
>emb|AL663005.3|OSJN00208 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062H02, complete sequence Length = 166747 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 2160 ggcgcggcggcgggcggcgg 2179
>emb|AL162758.2|NMA7Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 7/7 Length = 195767 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cgcggcggcgggcggcggag 130 |||||||||||||||||||| Sbjct: 155599 cgcggcggcgggcggcggag 155580
>emb|BX666059.13| Zebrafish DNA sequence from clone DKEYP-108D9 in linkage group 15, complete sequence Length = 121448 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcagtgatttttcagtggtg 21 |||||||||||||||||||| Sbjct: 33797 tcagtgatttttcagtggtg 33816
>ref|NM_001033466.1| Mus musculus gene model 1103, (NCBI) (Gm1103), mRNA Length = 3217 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 122 ggcgcggcggcgggcggcgg 103
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gttcaacaagctgctcacgc 197 |||||||||||||||||||| Sbjct: 2117707 gttcaacaagctgctcacgc 2117726 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 783604 ggcgcggcggcgggcggcgg 783623
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 18 ggtgctgcccagctcagtgctctccacc 45 ||||||||||| |||||||| ||||||| Sbjct: 585743 ggtgctgcccacctcagtgcgctccacc 585716
>tpg|BK000745.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M164, complete sequence Length = 1118 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 489 ggcgcggcggcgggcggcgg 508
>gb|AF394181.1| Chlamydomonas reinhardtii coiled-coil flagellar protein (MBO2) gene, complete cds Length = 7026 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 tggaggcgcggcggcgggcg 124 |||||||||||||||||||| Sbjct: 2770 tggaggcgcggcggcgggcg 2789
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 aggcgcggcggcgggcggcggagg 131 ||||| |||||||||||||||||| Sbjct: 103617 aggcgaggcggcgggcggcggagg 103594
>dbj|AK132308.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022402F10 product:Zinc finger and BTB domain containing protein 2 homolog [Homo sapiens], full insert sequence Length = 3217 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 122 ggcgcggcggcgggcggcgg 103
>gb|AC087723.3| Oryza sativa chromosome 10 clone OSJNBa0036D19, complete sequence Length = 144359 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 78575 ggcgcggcggcgggcggcgg 78594
>gb|BC108092.1| Bos taurus cDNA clone IMAGE:7948218 Length = 2135 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 81 gcggcggcgggcggcggagg 100
>dbj|AK003145.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001A17 product:cold shock domain protein A, full insert sequence Length = 1586 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 22 ggcgcggcggcgggcggcgg 3
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 1182506 ggcgcggcggcgggcggcgg 1182487
>dbj|AK076041.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610510O09 product:cold shock domain protein A, full insert sequence Length = 1590 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 27 ggcgcggcggcgggcggcgg 8
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cgcggcggcgggcggcggag 130 |||||||||||||||||||| Sbjct: 300717 cgcggcggcgggcggcggag 300736
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 caccgaggacgaggaggacgatgg 107 |||||| ||||||||||||||||| Sbjct: 13953041 caccgacgacgaggaggacgatgg 13953064 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 3645734 ggcgcggcggcgggcggcgg 3645753
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 26863132 gcggcggcgggcggcggagg 26863113
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 99360 ggcgcggcggcgggcggcgg 99379
>gb|AC008982.5|AC008982 Homo sapiens chromosome 19 clone LLNLF-172E10, complete sequence Length = 46581 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 41753 gcggcggcgggcggcggagg 41734
>gb|AC011455.6|AC011455 Homo sapiens chromosome 19 clone CTC-360G5, complete sequence Length = 148876 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 3021 gcggcggcgggcggcggagg 3002
>dbj|AP004304.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0483E06 Length = 159035 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 22147 gcggcggcgggcggcggagg 22166
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcgg 125 |||||||||||||||||||| Sbjct: 45953 ggaggcgcggcggcgggcgg 45934
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 8553962 ggcgcggcggcgggcggcgg 8553943
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 63033 ggcgcggcggcgggcggcgg 63052
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 116606 gcggcggcgggcggcggagg 116587
>dbj|AP005307.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0046D03 Length = 150554 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 142176 gcggcggcgggcggcggagg 142195
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 122798 ggcgcggcggcgggcggcgg 122817
>dbj|AP005517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0090H20 Length = 132628 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 47931 ggcgcggcggcgggcggcgg 47912
>dbj|AP005410.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0038P10 Length = 148527 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 6535 ggcgcggcggcgggcggcgg 6516
>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C08 Length = 152460 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 67768 gcggcggcgggcggcggagg 67787
>dbj|AK109702.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F08, full insert sequence Length = 1388 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 92 gcggcggcgggcggcggagg 111
>gb|AF145956.1|AF145956 Rhodospirillum rubrum transcriptional activator NifA (nifA) gene, complete cds; and NifB (nifB) gene, partial cds Length = 3152 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 2544 ggcgcggcggcgggcggcgg 2525
>dbj|AK104133.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E01, full insert sequence Length = 1145 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 62 gcggcggcgggcggcggagg 43
>dbj|AK071615.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D05, full insert sequence Length = 1209 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 63 gcggcggcgggcggcggagg 44
>gb|BC062377.1| Mus musculus cold shock domain protein A, mRNA (cDNA clone MGC:68100 IMAGE:6530404), complete cds Length = 1684 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 76 ggcgcggcggcgggcggcgg 57
>gb|BC048242.1| Mus musculus cold shock domain protein A, mRNA (cDNA clone MGC:54516 IMAGE:6493766), complete cds Length = 1864 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 76 ggcgcggcggcgggcggcgg 57
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 ggaggcgcggcggcgggcggcgga 129 ||||| |||||||||||||||||| Sbjct: 81327 ggaggggcggcggcgggcggcgga 81304
>gb|U73818.1|CRU73818 Chlamydomonas reinhardtii LRG5 gene, complete cds Length = 4396 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 1741 ggcgcggcggcgggcggcgg 1760
>emb|BX539331.7| Mouse DNA sequence from clone RP23-389M16 on chromosome 7, complete sequence Length = 69108 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 63560 gcggcggcgggcggcggagg 63541
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 3590701 ggcgcggcggcgggcggcgg 3590682
>gb|AC171062.5| Rhesus Macaque BAC CH250-364H15 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 164174 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 cagtggtgctgcccagctca 33 |||||||||||||||||||| Sbjct: 39760 cagtggtgctgcccagctca 39779
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 caccgaggacgaggaggacgatgg 107 |||||| ||||||||||||||||| Sbjct: 13960383 caccgacgacgaggaggacgatgg 13960406 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 3645655 ggcgcggcggcgggcggcgg 3645674
>gb|BC105778.1| Rattus norvegicus cold shock domain protein A, mRNA (cDNA clone MGC:124554 IMAGE:7932542), complete cds Length = 1900 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 71 ggcgcggcggcgggcggcgg 52
>gb|U22893.1|RNU22893 Rattus norvegicus muscle Y-box protein YB2 mRNA, complete cds Length = 1848 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 79 ggcgcggcggcgggcggcgg 60
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 accgaggacgaggaggacga 104 |||||||||||||||||||| Sbjct: 2048356 accgaggacgaggaggacga 2048337
>gb|U73817.1|CRU73817 Chlamydomonas reinhardtii LRG5 mRNA, complete cds Length = 2409 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 1150 ggcgcggcggcgggcggcgg 1169
>gb|L38394.1|MUSRYK Mus Musculus receptor tyrosine kinase-related protein (ryk2) mRNA, complete cds Length = 2092 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 21 gcggcggcgggcggcggagg 40
>gb|M98547.1|MUSRTKRP Mouse growth factor receptor (RYK) mRNA, complete cds Length = 2065 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 65 gcggcggcgggcggcggagg 84
>gb|AC125604.5| Homo sapiens 3 BAC RP11-473P24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 61826 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 109 ggcgcggcggcgggcggcggaggg 132 |||||||||||||| ||||||||| Sbjct: 11508 ggcgcggcggcggggggcggaggg 11485
>dbj|AB044547.1| Homo sapiens P/OKcl.14 mRNA for heterogeneous nuclear ribonucleoprotein L, complete cds Length = 2158 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gcggcggcgggcggcggagg 131 |||||||||||||||||||| Sbjct: 112 gcggcggcgggcggcggagg 131
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 13777 ggcgcggcggcgggcggcgg 13796
>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0402A09 Length = 141966 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 ggcgcggcggcgggcggcgg 128 |||||||||||||||||||| Sbjct: 50161 ggcgcggcggcgggcggcgg 50180 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,949,226 Number of Sequences: 3902068 Number of extensions: 1949226 Number of successful extensions: 65522 Number of sequences better than 10.0: 195 Number of HSP's better than 10.0 without gapping: 211 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 61159 Number of HSP's gapped (non-prelim): 4369 length of query: 228 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 206 effective length of database: 17,147,199,772 effective search space: 3532323153032 effective search space used: 3532323153032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
