>MASY_MAIZE (P49081) Malate synthase, glyoxysomal (EC 2.3.3.9)|
          Length = 559

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
 Frame = -3

Query: 175 WLAGWLA---SVPPCTEGSRAACLPVSAAHRWGWTRHTYAFTVLGV 47
           +LA WLA   SVP       AA   +S    W W RH  A    GV
Sbjct: 440 YLAAWLAGSGSVPLYNLMEDAATAEISRVQNWQWLRHGAALDAGGV 485

>PSTA_MYCLE (Q50097) Phosphate transport system permease protein pstA|
          Length = 304

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
 Frame = +3

Query: 306 LGYQ---YLVNHFLTLLLVPVMAATALELARLGPDEL 407
           LG+Q   + V+  L LL++PV+  +  E+ RL PDEL
Sbjct: 149 LGFQQSAFAVSLALVLLMLPVVVRSTEEILRLVPDEL 185

>NU3C_SYNY3 (P19045) NAD(P)H-quinone oxidoreductase chain 3 (EC 1.6.5.-)|
           (NAD(P)H dehydrogenase I, chain 3) (NDH-1, chain 3)
          Length = 120

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +3

Query: 297 YVKLGYQYLVNHFLTLLLVPVMAATALELAR 389
           +V  GY+Y +       LVPV+A TA +L R
Sbjct: 2   FVLTGYEYFLGFLFICSLVPVLALTASKLLR 32

>CATB_RAT (P00787) Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1) (RSG-2)|
           [Contains: Cathepsin B light chain; Cathepsin B heavy
           chain]
          Length = 339

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 61  TVLGVGCGAGCDAGMPGGA 5
           T  G+ CG GC+ G P GA
Sbjct: 140 TCCGIQCGDGCNGGYPSGA 158

>CATB_MOUSE (P10605) Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1)|
           [Contains: Cathepsin B light chain; Cathepsin B heavy
           chain]
          Length = 339

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 61  TVLGVGCGAGCDAGMPGGA 5
           T  G+ CG GC+ G P GA
Sbjct: 140 TCCGIQCGDGCNGGYPSGA 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,687,420
Number of Sequences: 219361
Number of extensions: 684580
Number of successful extensions: 3082
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3078
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)