>AX6B_SOYBN (P33083) Auxin-induced protein 6B|
          Length = 90

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +1

Query: 199 KGCCVMYTADG-RRFEVPLAYLGTLIFRELLHMSQEEFGFVSGDGRITLPCDATVMQYIM 375
           KG   +Y  +  RRF +P++YL    F++LL  ++EEFG+   +G +T+PC   V Q+I 
Sbjct: 27  KGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHIT 86

Query: 376 FLL 384
             L
Sbjct: 87  SFL 89

>AX10A_SOYBN (P33080) Auxin-induced protein X10A|
          Length = 92

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = +1

Query: 148 TTTATKEAECCSMAVAGKGCCVMYTADG-RRFEVPLAYLGTLIFRELLHMSQEEFGFVSG 324
           T+ A  +A   S+ V  KG  V+Y  D  RRF +P++YL    F++LL+ ++EEFG+   
Sbjct: 11  TSIAANQASSKSVEVP-KGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHP 69

Query: 325 DGRITLPC 348
            G +T+PC
Sbjct: 70  MGGLTIPC 77

>ARG7_PHAAU (P32295) Indole-3-acetic acid-induced protein ARG7|
          Length = 92

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
 Frame = +1

Query: 148 TTTATKEAECCSMAVAGKGCCVMYTADG-RRFEVPLAYLGTLIFRELLHMSQEEFGFVSG 324
           T +A  EA    +  A KG   +Y  +  +RF +P+++L   +F++LL  ++EEFG+   
Sbjct: 11  TLSARNEASS-KVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHP 69

Query: 325 DGRITLPCDATVMQYI 372
            G +T+PC   + Q+I
Sbjct: 70  MGGLTIPCSEDLFQHI 85

>A10A5_SOYBN (P33079) Auxin-induced protein 10A5|
          Length = 93

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
 Frame = +1

Query: 118 RVASLRRKQLTTTATKEAECCSMAVAGKGCCVMYTADG-RRFEVPLAYLGTLIFRELLHM 294
           R+A + R+  T+  T +A    + V  KG   +Y  D  RRF +P++YL    F+ELL  
Sbjct: 4   RIAGIVRR--TSFYTTQAASKRVDVP-KGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQ 60

Query: 295 SQEEFGFVSGDGRITLPC 348
           ++EEFG+    G +T+PC
Sbjct: 61  AEEEFGYDHPMGGLTIPC 78

>AX15A_SOYBN (P33081) Auxin-induced protein 15A|
          Length = 82

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +1

Query: 187 AVAGKGCCVMYTADG-RRFEVPLAYLGTLIFRELLHMSQEEFGFVSGDGRITLPCDATVM 363
           A A KG   +Y  +  +RF +P++YL    F++LL  ++EEFG+    G +T+PC   V 
Sbjct: 15  ADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVF 74

Query: 364 QYI 372
           Q I
Sbjct: 75  QCI 77

>AXX15_SOYBN (P33082) Auxin-induced protein X15|
          Length = 82

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = +1

Query: 193 AGKGCCVMYTADG-RRFEVPLAYLGTLIFRELLHMSQEEFGFVSGDGRITLPCDATVMQY 369
           A KG   +Y  +  +RF +P++Y+    F++LL  ++EEFG+    G +T+PC   V Q 
Sbjct: 17  APKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQR 76

Query: 370 I 372
           I
Sbjct: 77  I 77

>Y1903_CORGL (Q6M4B7) Hypothetical RNA methyltransferase Cgl1903/cg2084 (EC|
           2.1.1.-)
          Length = 412

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 20/48 (41%), Positives = 23/48 (47%)
 Frame = +1

Query: 67  PNMVSAKRIAQLAKKWQRVASLRRKQLTTTATKEAECCSMAVAGKGCC 210
           P  V    IAQL KKW R   +  K  T +A +    C  A AG GCC
Sbjct: 42  PGDVVDVEIAQLKKKWARGEVV--KVTTASADRVDSRCPAAAAGAGCC 87

>NFCP_CONGI (Q95W86) GFP-like non-fluorescent chromoprotein (cgCP)|
          Length = 227

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +3

Query: 105 KEVAKGSIPQEEAAYHDGDK---RSRMLLNGSGRQRLLCHVHS 224
           K+++ G  P  E  Y D      R+ M L  SGR  L+CH+HS
Sbjct: 134 KKISGGWEPCTEIVYQDNGVLRGRNVMALKVSGRPPLICHLHS 176

>UBC12_CAEEL (Q9XVK5) NEDD8-conjugating enzyme ubc-12 (EC 6.3.2.-) (NEDD8|
           protein ligase) (NEDD8 carrier protein)
           (Ubiquitin-conjugating enzyme E2 12)
          Length = 180

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = -2

Query: 321 AYKTKLLLRHMEELS---EDQCAKVRQWHLKPPPVSCVHD 211
           A + KLL + +++L     DQ  K + WHL+ P  SC+H+
Sbjct: 23  AVRDKLLAQELQQLETALRDQ--KQKLWHLEVPSTSCLHE 60

>NFCP_CONPS (Q95W11) GFP-like non-fluorescent chromoprotein (cpCP)|
          Length = 227

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 105 KEVAKGSIPQEEAAYHDGDK---RSRMLLNGSGRQRLLCHVHS 224
           K ++ G  P  E  Y D      R+ M L  SGR  L+CH+HS
Sbjct: 134 KNISGGWEPCTEIVYQDNGVLRGRNVMALKVSGRPPLICHLHS 176

>K1C13_HUMAN (P13646) Keratin, type I cytoskeletal 13 (Cytokeratin-13) (CK-13)|
           (Keratin-13) (K13)
          Length = 458

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 300 LRHMEELSEDQCAKVRQWHLKPPPVSCVHD 211
           +R +EE + D   K+R WHLK  P S   D
Sbjct: 122 VRALEEANADLEVKIRDWHLKQSPASPERD 151

>TETO_CAMJE (P10952) Tetracycline resistance protein tetO (Tet(O))|
          Length = 639

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 23/93 (24%), Positives = 43/93 (46%)
 Frame = +1

Query: 28  NSSRVPSFHLSEGPNMVSAKRIAQLAKKWQRVASLRRKQLTTTATKEAECCSMAVAGKGC 207
           N +  P +H S   N+ + + I  +A K+           ++T   ++E C     G+  
Sbjct: 210 NGTLFPVYHGSAKNNLGTRQLIEVIASKFY----------SSTPEGQSELC-----GQVF 254

Query: 208 CVMYTADGRRFEVPLAYLGTLIFRELLHMSQEE 306
            + Y+   RRF     Y GTL  R+++ +S++E
Sbjct: 255 KIEYSEKRRRFVYVRIYSGTLHLRDVIRISEKE 287

>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
           (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -3

Query: 353 ASQGNVILPSPLTKPNSS*DIWRSSLKISVPRYANGTSNRLPSAVYMTQQPLPATA 186
           A+ G +  P+PL+ P SS  +  S L     R A G+S+ +PS V  + +  P  A
Sbjct: 619 AASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAA 674

>MFGM_RAT (P70490) Lactadherin precursor (Milk fat globule-EGF factor 8)|
           (MFG-E8) (O-acetyl GD3 ganglioside synthase) (AGS)
           (MFGM)
          Length = 427

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 103 AKKWQRVASLRRKQLTTTATKEAECCSMAVAGKGCCVMYTADGRRFE 243
           +K W +V  LR+ +++   T+ A     A   K   V Y+ DGRRFE
Sbjct: 165 SKPWIQVDFLRKMRVSGVMTQGASRAGRAEYLKTFKVAYSLDGRRFE 211

>MFGM_PIG (P79385) Lactadherin (Milk fat globule-EGF factor 8) (MFG-E8)|
           (MFGM) (Sperm surface protein SP47) (PP47)
          Length = 409

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 112 WQRVASLRRKQLTTTATKEAECCSMAVAGKGCCVMYTADGRRFE 243
           W +V  LRR ++T   T+ A     A   K   V Y+ DGR+F+
Sbjct: 148 WIQVNLLRRMRVTGVVTQGASRAGSAEYMKTFKVAYSTDGRKFQ 191

>MFGM_MOUSE (P21956) Lactadherin precursor (Milk fat globule-EGF factor 8)|
           (MFG-E8) (MFGM) (Sperm surface protein SP47) (MP47)
          Length = 463

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +1

Query: 103 AKKWQRVASLRRKQLTTTATKEAECCSMAVAGKGCCVMYTADGRRFE 243
           +K W +V  LR+ +++   T+ A     A   K   V Y+ DGR+FE
Sbjct: 202 SKPWIQVNLLRKMRVSGVMTQGASRAGRAEYLKTFKVAYSLDGRKFE 248

>RL15_VIBVY (Q7MPG9) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 37  RVPSFHLSEGPNMVSAK-RIAQLAKKWQRVASLRRKQLTTTATKEAECCSMAVAGK 201
           R+P F  +   ++VSA+ R+A+LAK    V  L   +     TK  E   + ++G+
Sbjct: 60  RLPKFGFTSRKSLVSAEVRVAELAKVTGDVVDLNSLKAANVITKNIENVKIVLSGE 115

>RL15_VIBVU (Q8DE59) 50S ribosomal protein L15|
          Length = 144

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 37  RVPSFHLSEGPNMVSAK-RIAQLAKKWQRVASLRRKQLTTTATKEAECCSMAVAGK 201
           R+P F  +   ++VSA+ R+A+LAK    V  L   +     TK  E   + ++G+
Sbjct: 60  RLPKFGFTSRKSLVSAEVRVAELAKVTGDVVDLNSLKAANVITKNIENVKIVLSGE 115

>TETO_STRMU (P20174) Tetracycline resistance protein tetO (Tet(O))|
          Length = 639

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 23/93 (24%), Positives = 42/93 (45%)
 Frame = +1

Query: 28  NSSRVPSFHLSEGPNMVSAKRIAQLAKKWQRVASLRRKQLTTTATKEAECCSMAVAGKGC 207
           N +  P +H S   N+   + I  +A K+           ++T   ++E C     G+  
Sbjct: 210 NGTLFPVYHGSAKNNLGIRQLIEVIASKFY----------SSTPEGQSELC-----GQVF 254

Query: 208 CVMYTADGRRFEVPLAYLGTLIFRELLHMSQEE 306
            + Y+   RRF     Y GTL  R+++ +S++E
Sbjct: 255 KIEYSEKRRRFVYVRIYSGTLHLRDVIRISEKE 287

>TETO_CAMCO (P23835) Tetracycline resistance protein tetO (Tet(O))|
          Length = 639

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 23/93 (24%), Positives = 42/93 (45%)
 Frame = +1

Query: 28  NSSRVPSFHLSEGPNMVSAKRIAQLAKKWQRVASLRRKQLTTTATKEAECCSMAVAGKGC 207
           N +  P +H S   N+   + I  +A K+           ++T   ++E C     G+  
Sbjct: 210 NGTLFPVYHGSAKNNLGIRQLIEVIASKFY----------SSTPEGQSELC-----GQVF 254

Query: 208 CVMYTADGRRFEVPLAYLGTLIFRELLHMSQEE 306
            + Y+   RRF     Y GTL  R+++ +S++E
Sbjct: 255 KIEYSEKRRRFVYVRIYSGTLHLRDVIRISEKE 287

>Y484_TREPA (O83497) Hypothetical protein TP0484|
          Length = 671

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 10  PQTKHCNSSRVPSFHLSEGPNMVSAKRIAQ---LAKKWQRVASLRRKQLT 150
           P+T+   + R PSF L + P +++ K + Q   L  KW  V + +R  +T
Sbjct: 544 PETRDLIALRAPSFVLRDMPALITEKYLLQHRALRCKWTAVHNAQRYTVT 593

>SYI_BRAJA (Q89DF8) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
            ligase) (IleRS)
          Length = 1002

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 18/62 (29%), Positives = 31/62 (50%)
 Frame = +1

Query: 43   PSFHLSEGPNMVSAKRIAQLAKKWQRVASLRRKQLTTTATKEAECCSMAVAGKGCCVMYT 222
            PS HL+  P  +   R  +LA KW+ + ++RR  +T     E    ++  + +   V+Y 
Sbjct: 852  PSVHLTLFPADIEKLRDDKLAAKWETIRNVRR-AVTGALELERAAKNIGSSLEASPVIYV 910

Query: 223  AD 228
            AD
Sbjct: 911  AD 912

>PAM_STRPY (P49054) Plasminogen-binding group A steptococcal M-like protein|
           PAM precursor (Fragment)
          Length = 388

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/36 (38%), Positives = 24/36 (66%)
 Frame = +1

Query: 97  QLAKKWQRVASLRRKQLTTTATKEAECCSMAVAGKG 204
           QLAK+ + +A LR ++ + + T +A+  + AV GKG
Sbjct: 323 QLAKQAEELAKLRAEKASDSQTPDAKPGNKAVPGKG 358

>TETO_STRPN (P72533) Tetracycline resistance protein tetO (Tet(O))|
          Length = 639

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 23/93 (24%), Positives = 42/93 (45%)
 Frame = +1

Query: 28  NSSRVPSFHLSEGPNMVSAKRIAQLAKKWQRVASLRRKQLTTTATKEAECCSMAVAGKGC 207
           N +  P +H S   N+   + I  +A K+           ++T   ++E C     G+  
Sbjct: 210 NGTLFPVYHGSAKNNLGIRQLIEVIASKFY----------SSTPEGQSELC-----GQVF 254

Query: 208 CVMYTADGRRFEVPLAYLGTLIFRELLHMSQEE 306
            + Y+   RRF     Y GTL  R+++ +S++E
Sbjct: 255 KIEYSEKRRRFVYVRIYSGTLHLRDVIKISEKE 287

>STA5B_MOUSE (P42232) Signal transducer and activator of transcription 5B|
          Length = 786

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 287 RSSLKISVPRYANGTSNRLPSAVYMTQQPLPATAIEQH 174
           +  +K  VP +AN +++    A YM Q P P    + H
Sbjct: 701 KPQIKQVVPEFANASTDAGSGATYMDQAPSPVVCPQAH 738

>YE99_SCHPO (O13771) Hypothetical protein C17A5.09c in chromosome I|
          Length = 310

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 329 PSPLTKPNSS*DIWRSSLKISVPRYANGTSNRLPS 225
           P P T+P +S D +   +K   P+Y+  T N LPS
Sbjct: 152 PVPCTEPTTSGDRYTVRMKAPTPKYS--TDNHLPS 184

>STA5A_MOUSE (P42230) Signal transducer and activator of transcription 5A|
           (Mammary gland factor)
          Length = 793

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 287 RSSLKISVPRYANGTSNRLPSAVYMTQQPLPATAIEQH 174
           +  +K  VP + N +++   SA YM Q P P    + H
Sbjct: 696 KPQIKQVVPEFVNASTDAGASATYMDQAPSPVVCPQPH 733

>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)|
          Length = 1942

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 324 TAYKTKLLLRHMEELSEDQCAKVRQWHLKPPP 229
           TA    L   H+E+L E  C     WH +PPP
Sbjct: 144 TATSNALSGYHVEDLDEGSC---NGWHFRPPP 172


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,927,141
Number of Sequences: 219361
Number of extensions: 1084766
Number of successful extensions: 3034
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3033
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)