Clone Information

BLAST Search Result

Clone Name	baet97f07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ...	208	2e-54
2	RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ...	208	2e-54
3	RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ...	206	1e-53
4	RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a...	206	1e-53
5	RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ...	206	1e-53
6	RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a...	201	3e-52
7	RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a...	201	4e-52
8	RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a...	201	4e-52
9	RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a...	200	9e-52
10	RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a...	199	1e-51
11	RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a...	199	1e-51
12	RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ...	198	3e-51
13	RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ...	198	3e-51
14	RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a...	197	7e-51
15	RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a...	192	2e-49
16	RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a...	182	2e-46
17	RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a...	156	1e-38
18	RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a...	153	9e-38
19	MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1)...	31	0.70
20	EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosin...	31	0.91
21	DTD_BURPS (Q63QX1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	31	0.91
22	DTD_BURMA (Q62HB3) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	31	0.91
23	EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosin...	31	0.91
24	FILA_HUMAN (P20930) Filaggrin	31	0.91
25	EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-...	30	1.2
26	EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosin...	30	1.2
27	LEP4_XANCP (Q56763) Type 4 prepilin-like proteins leader peptide...	29	3.5
28	PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Proteas...	28	4.5
29	PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Proteas...	28	4.5
30	FLGK_SALTY (P0A1J5) Flagellar hook-associated protein 1 (HAP1)	28	5.9
31	FLGK_SALTI (P0A1J6) Flagellar hook-associated protein 1 (HAP1)	28	5.9
32	K6PF_SCHPO (O42938) 6-phosphofructokinase (EC 2.7.1.11) (Phospho...	28	5.9
33	P2RY2_BOVIN (O18951) P2Y purinoceptor 2 (P2Y2) (Fragment)	28	7.7
34	SCN4A_HUMAN (P35499) Sodium channel protein type 4 alpha subunit...	28	7.7
35	PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)	28	7.7
36	Y3433_MYCTU (O06250) Hypothetical protein Rv3433c/MT3539	28	7.7
37	TPP1_SCHPO (P78875) Trehalose-phosphatase (EC 3.1.3.12) (Trehalo...	28	7.7
38	SCN4A_RAT (P15390) Sodium channel protein type 4 alpha subunit (...	28	7.7
39	ACO1_YEAST (P21147) Acyl-CoA desaturase 1 (EC 1.14.19.1) (Stearo...	28	7.7

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  208 bits (530), Expect = 2e-54
 Identities = 97/99 (97%), Positives = 99/99 (100%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV
Sbjct: 206 KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 265

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCK
Sbjct: 266 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCK 304

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>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  208 bits (530), Expect = 2e-54
 Identities = 98/99 (98%), Positives = 98/99 (98%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNK ENPRV
Sbjct: 209 KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRV 268

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK
Sbjct: 269 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 307

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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  206 bits (524), Expect = 1e-53
 Identities = 96/99 (96%), Positives = 98/99 (98%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRV
Sbjct: 219 KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRV 278

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCK
Sbjct: 279 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCK 317

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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  206 bits (524), Expect = 1e-53
 Identities = 95/99 (95%), Positives = 98/99 (98%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRV
Sbjct: 209 KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRV 268

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCK
Sbjct: 269 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCK 307

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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  206 bits (524), Expect = 1e-53
 Identities = 96/99 (96%), Positives = 98/99 (98%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRV
Sbjct: 219 KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRV 278

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCK
Sbjct: 279 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCK 317

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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  201 bits (512), Expect = 3e-52
 Identities = 92/98 (93%), Positives = 97/98 (98%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMCCLFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRV
Sbjct: 216 KGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRV 275

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVC 298
           PI+VTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIG+C
Sbjct: 276 PIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGIC 313

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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  201 bits (511), Expect = 4e-52
 Identities = 94/99 (94%), Positives = 96/99 (96%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RV
Sbjct: 219 KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARV 278

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PI+ TGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCK
Sbjct: 279 PIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCK 317

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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  201 bits (511), Expect = 4e-52
 Identities = 94/99 (94%), Positives = 97/99 (97%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKM CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRV
Sbjct: 215 KGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRV 274

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCK
Sbjct: 275 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCK 313

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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  200 bits (508), Expect = 9e-52
 Identities = 93/99 (93%), Positives = 96/99 (96%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KG MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RV
Sbjct: 218 KGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARV 277

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCK
Sbjct: 278 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCK 316

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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  199 bits (507), Expect = 1e-51
 Identities = 93/99 (93%), Positives = 96/99 (96%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RV
Sbjct: 221 KGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARV 280

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCK
Sbjct: 281 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCK 319

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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  199 bits (507), Expect = 1e-51
 Identities = 93/98 (94%), Positives = 96/98 (97%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRV
Sbjct: 219 KGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRV 278

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVC 298
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC
Sbjct: 279 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC 316

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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  198 bits (504), Expect = 3e-51
 Identities = 92/99 (92%), Positives = 96/99 (96%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KG +CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RV
Sbjct: 223 KGNICCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARV 282

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCK
Sbjct: 283 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCK 321

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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  198 bits (503), Expect = 3e-51
 Identities = 92/98 (93%), Positives = 95/98 (96%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KG MCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RV
Sbjct: 223 KGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARV 282

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVC 298
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC
Sbjct: 283 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC 320

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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  197 bits (500), Expect = 7e-51
 Identities = 92/99 (92%), Positives = 96/99 (96%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+N RV
Sbjct: 223 KGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARV 282

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCK
Sbjct: 283 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCK 321

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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  192 bits (487), Expect = 2e-49
 Identities = 89/98 (90%), Positives = 94/98 (95%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KGKMC LFINDL+ GAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK++N RV
Sbjct: 217 KGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARV 276

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVC 298
           PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC
Sbjct: 277 PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC 314

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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  182 bits (462), Expect = 2e-46
 Identities = 86/98 (87%), Positives = 90/98 (91%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           KG+MC LFINDLDAGAGRMG TTQYTVNNQMVNATLMNIAD PTNVQLPG+Y  EE PRV
Sbjct: 192 KGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRV 251

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVC 298
           PIV TGNDFSTLYAPLIRDGRMEK+YW PTR+DRIGVC
Sbjct: 252 PIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVC 289

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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  156 bits (394), Expect = 1e-38
 Identities = 73/97 (75%), Positives = 81/97 (83%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           +GKMC L INDLDAGAGR    TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RV
Sbjct: 92  RGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRV 151

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGV 295
           PI+VTGNDFSTLYAPLIRDGRMEKFYW P RDD++G+
Sbjct: 152 PIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGI 188

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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  153 bits (387), Expect = 9e-38
 Identities = 72/97 (74%), Positives = 81/97 (83%)
 Frame = +2

Query: 5   KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 184
           +GKMC L INDLDAGAGR    TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RV
Sbjct: 92  RGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRV 151

Query: 185 PIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGV 295
           PI+VTGNDFSTLYAPLIRDGRMEKFYW P RD+++G+
Sbjct: 152 PIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGI 188

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>MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1) (Protein nM15)|
          Length = 529

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
 Frame = -2

Query: 293 HRYGRHGWEPSRTSPYDHHGSEEXXXXXXXXXXXRWAHGGSPPCCTCQGAARWWGHR--R 120
           H    H W+  R  P+++    +            W H  +P     +G + W G    R
Sbjct: 181 HTLAFHDWQGPR--PWENLNLSDWEVQSPIQVSGDWEHPNTP-----RGLSGWEGPSTSR 233

Query: 119 CSSGWRSPSGC*RCTAWFRPS 57
             SGW  PS     +AW  PS
Sbjct: 234 ILSGWEGPSASWALSAWEGPS 254

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>EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (HEP)
          Length = 1006

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -2

Query: 179 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 54
           GGSPP   C G  +W    G  RC  G++   G   C A  R  Y
Sbjct: 263 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 307

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>DTD_BURPS (Q63QX1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 152

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
 Frame = +2

Query: 8   GKMCCLFINDLDAGAGRMGG---TTQYTV---NNQMVNATLMNIADAPTNVQLPGMYNKE 169
           GKM  L +++LD GAGR GG    +Q+T+    N  +  +    A      +L   + + 
Sbjct: 60  GKMN-LPVSNLD-GAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRR 117

Query: 170 ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 277
              R PIV TG   + +   L+ DG +   +W  TR
Sbjct: 118 ARERHPIVATGEFGADMQVSLVNDGPVT--FWLQTR 151

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>DTD_BURMA (Q62HB3) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 152

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
 Frame = +2

Query: 8   GKMCCLFINDLDAGAGRMGG---TTQYTV---NNQMVNATLMNIADAPTNVQLPGMYNKE 169
           GKM  L +++LD GAGR GG    +Q+T+    N  +  +    A      +L   + + 
Sbjct: 60  GKMN-LPVSNLD-GAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRR 117

Query: 170 ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 277
              R PIV TG   + +   L+ DG +   +W  TR
Sbjct: 118 ARERHPIVATGEFGADMQVSLVNDGPVT--FWLQTR 151

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>EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1005

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -2

Query: 179 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 54
           GGSPP   C G  +W    G  RC  G++   G   C A  R  Y
Sbjct: 262 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 306

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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = +1

Query: 43   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 168
            RW G   RNH  +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 3554 RWSGSASRNHRGSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSG 3599



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +1

Query: 43   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 168
            RW G   RNH  +   Q  DG RHP  H+  R  H  +A    Q G
Sbjct: 2906 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2951



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +1

Query: 43   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 168
            RW G   RNH  +   Q  DG RHP  H+  R  H  +A    Q G
Sbjct: 2582 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2627



 Score = 30.0 bits (66), Expect = 1.6
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = +1

Query: 43   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 168
            RW G   RNH  +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 1933 RWSGSASRNHLGSAWEQSRDGSRHPGSHHEDRAGHGHSADSSRQSG 1978



 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = +1

Query: 43  RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAA 147
           RW G   RNH  +   Q  DG RHP  H   R  H  +A
Sbjct: 636 RWSGSASRNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSA 674

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>EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1013

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = -2

Query: 179 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 54
           GGSPP   C G  RW    G  RC  G +   G   C A    SY
Sbjct: 272 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSY 316

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>EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (MEP)
          Length = 1014

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = -2

Query: 179 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 54
           GGSPP   C G  RW    G  RC  G +   G   C A    SY
Sbjct: 273 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSY 317

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>LEP4_XANCP (Q56763) Type 4 prepilin-like proteins leader peptide-processing|
           enzyme [Includes: Leader peptidase (EC 3.4.23.43)
           (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)]
          Length = 287

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -1

Query: 207 SLPVTTMGTRGFSSLLYMPGSCTLVGASAMFIRVAFTIWLL 85
           +LP+  +G  G    LYMP    L+GA+  ++ + +T+W L
Sbjct: 157 TLPLMWLGLVGSMDNLYMPAKPALLGAAVGYVSL-WTVWWL 196

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>PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 298 ADTDTVVTGGSPVELLHTTITDQRSVERREIV 203
           AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 338 ADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369

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>PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 298 ADTDTVVTGGSPVELLHTTITDQRSVERREIV 203
           AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 338 ADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369

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>FLGK_SALTY (P0A1J5) Flagellar hook-associated protein 1 (HAP1)|
          Length = 552

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 67  SAHPTRTSVKIVDEEAAHLTLP 2
           SA PTRT+V  VDE A ++ +P
Sbjct: 249 SADPTRTTVAYVDEAAGNIEIP 270

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>FLGK_SALTI (P0A1J6) Flagellar hook-associated protein 1 (HAP1)|
          Length = 552

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 67  SAHPTRTSVKIVDEEAAHLTLP 2
           SA PTRT+V  VDE A ++ +P
Sbjct: 249 SADPTRTTVAYVDEAAGNIEIP 270

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>K6PF_SCHPO (O42938) 6-phosphofructokinase (EC 2.7.1.11) (Phosphofructokinase)|
           (Phosphohexokinase) (6PF-1-K)
          Length = 942

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 112 DEHRRCPHQRAAPWHVQQGGEP 177
           + H+R   + A P HVQQGG P
Sbjct: 835 EAHKRFSARTAVPGHVQQGGNP 856

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>P2RY2_BOVIN (O18951) P2Y purinoceptor 2 (P2Y2) (Fragment)|
          Length = 133

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 111 RVAFTIWLLTVYCVVP 64
           RVAF +W+L +YC  P
Sbjct: 26  RVAFAVWVLVLYCQAP 41

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>SCN4A_HUMAN (P35499) Sodium channel protein type 4 alpha subunit (Sodium|
           channel protein type IV alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.4) (Sodium channel
           protein, skeletal muscle alpha-subunit) (SkM1)
          Length = 1836

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 180 RGFSSLLYMPGSCTLVGASAMFIRVAFTIWLLTVYCV 70
           R   ++  +PG  T+VGA    ++    + +LTV+C+
Sbjct: 225 RALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCL 261

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>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
 Frame = +2

Query: 23  LFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 193
           +FI+++DA      GT +Y  N+   + +  T++ + +     QL G  ++ +   V ++
Sbjct: 281 VFIDEIDAV-----GTKRYDSNSGGEREIQRTMLELLN-----QLDGFDSRGD---VKVI 327

Query: 194 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 286
           +  N   TL   LIR GR+++    P  D++
Sbjct: 328 MATNRIETLDPALIRPGRIDRKIEFPLPDEK 358

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>Y3433_MYCTU (O06250) Hypothetical protein Rv3433c/MT3539|
          Length = 473

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +2

Query: 125 DAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCK 301
           D P  V   G+    ++P +   V G +  T+  P    G   +   AP  DDR+G C+
Sbjct: 316 DLPVLVDADGLTMLADHPDL---VAGRNAPTVLTP--HAGEFARLAGAPPGDDRVGACR 369

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>TPP1_SCHPO (P78875) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate|
           phosphatase) (TPP)
          Length = 817

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 50  AGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 175
           +GR G TT Y+  N + N+T            +P +  KEEN
Sbjct: 62  SGRRGATTMYSSMNWLANSTYWQTTLVGWTGVIPTVSEKEEN 103

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>SCN4A_RAT (P15390) Sodium channel protein type 4 alpha subunit (Sodium|
           channel protein type IV alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.4) (Sodium channel
           protein, skeletal muscle alpha-subunit) (Mu-1)
          Length = 1840

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 180 RGFSSLLYMPGSCTLVGASAMFIRVAFTIWLLTVYCV 70
           R   ++  +PG  T+VGA    ++    + +LTV+C+
Sbjct: 225 RALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCL 261

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>ACO1_YEAST (P21147) Acyl-CoA desaturase 1 (EC 1.14.19.1) (Stearoyl-CoA|
           desaturase 1) (Fatty acid desaturase 1)
          Length = 510

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 164 CCTCQGAARWWGH 126
           C + +G+A+WWGH
Sbjct: 184 CASVEGSAKWWGH 196


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,528,919
Number of Sequences: 219361
Number of extensions: 1023669
Number of successful extensions: 3322
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3317
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result