ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet97f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 44.1 bits (22), Expect = 0.13 Identities = 22/22 (100%) Strand = Plus / Plus Query: 117 tggcggttgatttcaatgattt 138 |||||||||||||||||||||| Sbjct: 297379 tggcggttgatttcaatgattt 297400
>ref|XM_466744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1574 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 238 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 286
>ref|XM_466743.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1371 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 250 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 298
>ref|XM_507509.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1586 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 250 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 298
>ref|XM_507508.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1631 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 251 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 299
>ref|XM_507507.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_507506.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_507505.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_507504.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_507503.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_507502.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_507501.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_507500.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_507499.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_507498.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1592 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_507497.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1624 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>ref|XM_506867.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1792_D02.5-2 mRNA Length = 1590 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 257 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 305
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 24392454 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 24392502
>dbj|AP004097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1792_D02 Length = 141649 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 20660 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 20708
>dbj|AK109334.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B09, full insert sequence Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK119668.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-H04, full insert sequence Length = 1631 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 251 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 299
>dbj|AK106124.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F02, full insert sequence Length = 1586 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 250 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 298
>dbj|AK106204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-F12, full insert sequence Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK104569.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G04, full insert sequence Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK104563.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-D08, full insert sequence Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK104662.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E08, full insert sequence Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK104632.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C05, full insert sequence Length = 1624 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK104455.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A09, full insert sequence Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK104383.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-C11, full insert sequence Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK104310.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H06, full insert sequence Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK104307.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E07, full insert sequence Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK104284.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-A03, full insert sequence Length = 1574 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 238 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 286
>dbj|AK103939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G07, full insert sequence Length = 1589 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 253 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 301
>dbj|AK064829.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F09, full insert sequence Length = 1591 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 258 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 306
>dbj|AK060972.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D12, full insert sequence Length = 1371 Score = 42.1 bits (21), Expect = 0.49 Identities = 42/49 (85%) Strand = Plus / Plus Query: 5 gacccgaaaaacatcaccaggacctggtctggccatgacatctgcggca 53 ||||| || ||||||||| |||||| | ||||||||||||||||||| Sbjct: 250 gaccccaagaacatcaccgccacctggaccggccatgacatctgcggca 298
>ref|NM_122516.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G26150 mRNA, complete cds Length = 2112 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 catgacatctgcggcaggaa 57 |||||||||||||||||||| Sbjct: 1743 catgacatctgcggcaggaa 1762
>dbj|AK221251.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL24-07-D22 Length = 710 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 catgacatctgcggcaggaa 57 |||||||||||||||||||| Sbjct: 269 catgacatctgcggcaggaa 250
>dbj|AK105020.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A05, full insert sequence Length = 1329 Score = 40.1 bits (20), Expect = 2.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 acctggtctggccatgacatctgcggca 53 |||||| | ||||||||||||||||||| Sbjct: 14 acctggaccggccatgacatctgcggca 41
>dbj|AK061687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B02, full insert sequence Length = 1323 Score = 40.1 bits (20), Expect = 2.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 acctggtctggccatgacatctgcggca 53 |||||| | ||||||||||||||||||| Sbjct: 8 acctggaccggccatgacatctgcggca 35
>gb|AF149413.1|T1N24 Arabidopsis thaliana BAC T1N24 Length = 127053 Score = 40.1 bits (20), Expect = 2.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 catgacatctgcggcaggaa 57 |||||||||||||||||||| Sbjct: 8301 catgacatctgcggcaggaa 8320
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 38.2 bits (19), Expect = 7.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 123 ttgatttcaatgattttgccatg 145 |||||||| |||||||||||||| Sbjct: 224861 ttgatttcgatgattttgccatg 224883
>ref|XM_454357.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E09009g predicted mRNA Length = 2445 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 126 atttcaatgattttgccat 144 ||||||||||||||||||| Sbjct: 2053 atttcaatgattttgccat 2071
>ref|XM_741351.1| Aspergillus fumigatus Af293 MFS transporter (Afu4g00120) partial mRNA Length = 1662 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 8 ccgaaaaacatcaccagga 26 ||||||||||||||||||| Sbjct: 311 ccgaaaaacatcaccagga 293
>ref|XM_567632.1| Cryptococcus neoformans var. neoformans JEC21 regulation of meiosis-related protein (CNK00690) partial mRNA Length = 1949 Score = 38.2 bits (19), Expect = 7.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 123 ttgatttcaatgattttgccatg 145 |||||||| |||||||||||||| Sbjct: 931 ttgatttcgatgattttgccatg 909
>ref|XM_721155.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05745) partial mRNA Length = 5832 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 123 ttgatttcaatgattttgc 141 ||||||||||||||||||| Sbjct: 2866 ttgatttcaatgattttgc 2848
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 126 atttcaatgattttgccat 144 ||||||||||||||||||| Sbjct: 807551 atttcaatgattttgccat 807533
>gb|AC163343.2| Mus musculus BAC clone RP23-472D11 from chromosome 13, complete sequence Length = 164331 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 aaatcctaccttgggttcc 74 ||||||||||||||||||| Sbjct: 54 aaatcctaccttgggttcc 36
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 aggaaatcctaccttgggt 71 ||||||||||||||||||| Sbjct: 4818758 aggaaatcctaccttgggt 4818740
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aggaaatcctaccttgggt 71 ||||||||||||||||||| Sbjct: 119664 aggaaatcctaccttgggt 119682
>emb|AL845360.10| Mouse DNA sequence from clone RP23-421L7 on chromosome 2, complete sequence Length = 196651 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 127 tttcaatgattttgccatg 145 ||||||||||||||||||| Sbjct: 152220 tttcaatgattttgccatg 152202
>gb|AF221008.1|AF221008 Haemophilus ducreyi HtrB (htrB) gene, complete cds Length = 954 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 gcggttgatttcaatgatt 137 ||||||||||||||||||| Sbjct: 796 gcggttgatttcaatgatt 814
>emb|CT030176.18| Mouse DNA sequence from clone RP23-142L17 on chromosome 13, complete sequence Length = 218075 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 aaatcctaccttgggttcc 74 ||||||||||||||||||| Sbjct: 173733 aaatcctaccttgggttcc 173715
>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome Length = 1698955 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 119 gcggttgatttcaatgatt 137 ||||||||||||||||||| Sbjct: 881753 gcggttgatttcaatgatt 881771
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 aggaaatcctaccttgggt 71 ||||||||||||||||||| Sbjct: 4818739 aggaaatcctaccttgggt 4818721
>emb|AL713946.3|CNS07YPP Oryza sativa chromosome 12, . BAC OJ1005_B07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161762 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 aggaaatcctaccttgggt 71 ||||||||||||||||||| Sbjct: 28373 aggaaatcctaccttgggt 28391
>dbj|AP004495.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT08B24, TM0027, complete sequence Length = 87135 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 gttgatttcaatgattttg 140 ||||||||||||||||||| Sbjct: 73643 gttgatttcaatgattttg 73661 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,134,833 Number of Sequences: 3902068 Number of extensions: 1134833 Number of successful extensions: 67830 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67696 Number of HSP's gapped (non-prelim): 134 length of query: 160 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 138 effective length of database: 17,147,199,772 effective search space: 2366313568536 effective search space used: 2366313568536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
