ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1G3PA_MAIZE (P09315) Glyceraldehyde-3-phosphate dehydrogenase A, ... 53 2e-07
2PK2_DICDI (P28178) Protein kinase 2 (EC 2.7.11.1) 28 6.6

>G3PA_MAIZE (P09315) Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast|
           precursor (EC 1.2.1.13) (NADP-dependent
           glyceraldehydephosphate dehydrogenase subunit A)
          Length = 403

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 30/53 (56%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = +1

Query: 43  MASPMLSTAMAPLQ--GGMLEFXXXXXXXXXXXXXNATSDDFMSAVSFRTYAV 195
           MAS MLS    PLQ  GG+ EF             NATSDDFMSAVSFRT+AV
Sbjct: 1   MASSMLSATTVPLQQGGGLSEFSGLRSSASLPMRRNATSDDFMSAVSFRTHAV 53



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>PK2_DICDI (P28178) Protein kinase 2 (EC 2.7.11.1)|
          Length = 479

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
 Frame = -1

Query: 176 ETADMKSSEVAFR---RSGSDDELLSPENSSMPPWSGAMAVESMGDAMSK 36
           E  D K  EV F+   +SG+D   + P  +   P    +   ++GDAM K
Sbjct: 413 EKLDRKEVEVHFKPKVKSGTDISQIDPVFTQERPMDSLVETSALGDAMGK 462


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,388,321
Number of Sequences: 219361
Number of extensions: 248389
Number of successful extensions: 963
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 80,573,946
effective HSP length: 42
effective length of database: 71,360,784
effective search space used: 1712658816
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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