ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
2dbj|AK119220.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
3dbj|AK104690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
4dbj|AK103994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
5dbj|AK103932.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
6dbj|AK103922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
7dbj|AK071685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
8dbj|AK067817.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 1e-36
9ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predic... 153 2e-34
10emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4,... 141 9e-31
11emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4,... 141 9e-31
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 141 9e-31
13emb|X15408.1|ZMGPA1 Maize Gpa1 gene for glyceraldehyde-3-phospha... 123 2e-25
14emb|X07157.1|ZMCHGADP Maize cytosolic mRNA for subunit A of chlo... 123 2e-25
15gb|AY103602.1| Zea mays PCO093211 mRNA sequence 123 2e-25
16gb|M31481.1|MZENAR1 Maize glyceraldehyde-3-phosphate dehydrogena... 123 2e-25
17gb|M18976.1|MZEG3PD Zea mays chloroplast glyceraldehyde-3-phosph... 123 2e-25
18gb|AF022730.1|AF022730 Oryza sativa glyceralehyde-3-phosphate de... 117 1e-23
19emb|X15406.1|ZMPGPA1 Maize pseudo-Gpa1 pseudogene for glyceralde... 109 3e-21
20emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceralde... 90 3e-15
21gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, com... 46 0.041
22gb|AY450985.1| HIV-1 isolate NN92/732 from USA tat protein (tat)... 42 0.64
23gb|AY450984.1| HIV-1 isolate NN88/732 from USA tat protein (tat)... 42 0.64
24gb|U43999.1|HIVU43999 Human immunodeficiency virus type 1 tat mR... 42 0.64
25ref|XM_483629.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.5
26gb|AY734209.1| HIV-1 isolate E089BB from USA tat protein (tat) g... 40 2.5
27gb|AY734165.1| HIV-1 isolate E055BB from USA tat protein (tat) g... 40 2.5
28gb|AY734164.1| HIV-1 isolate B055BB from USA tat protein (tat) g... 40 2.5
29gb|AY734163.1| HIV-1 isolate E055AA from USA tat protein (tat) g... 40 2.5
30gb|AY734162.1| HIV-1 isolate B055AA from USA tat protein (tat) g... 40 2.5
31gb|DQ396398.1| HIV-1 isolate 03ZAPS045MB2 from South Africa, com... 40 2.5
32gb|AY450998.1| HIV-1 isolate SS90/26 from USA tat protein (tat) ... 40 2.5
33gb|AY450969.1| HIV-1 isolate AE96/999260 from USA tat protein (t... 40 2.5
34emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 2.5
35emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 2.5
36gb|AF408629.1| HIV-1 isolate A32879 from Argentina, complete genome 40 2.5
37gb|AY713412.1| HIV-1 isolate 90US_873 from USA gag protein (gag)... 40 2.5
38dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
39gb|AF326484.1|AF326484 Zea mays NOD26-like membrane integral pro... 40 2.5
40gb|AY857182.2| HIV-1 isolate 9762120 from Australia, partial genome 40 2.5
41dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
42gb|AY835778.1| HIV-1 isolate 5018-86 clone pbf6 from USA, comple... 40 2.5
43gb|AY835777.1| HIV-1 isolate 5018-83 clone pbf4 from USA, comple... 40 2.5
44gb|U80572.1|HIVU80572 HIV-1 patient TPVIII, sample 1995, tat pro... 40 2.5
45gb|U80555.1|HIVU80555 HIV-1 patient LTS16, sample 1995, tat prot... 40 2.5
46gb|AF000525.1|AF000525 HIV-1 strain CH94-A2tat from USA, Tat pro... 40 2.5
47gb|AF000522.1|AF000522 HIV-1 strain AD93-A3tat from USA, Tat pro... 40 2.5
48gb|U44018.1|HIVU44018 Human immunodeficiency virus type 1 tat mR... 40 2.5
49gb|U44017.1|HIVU44017 Human immunodeficiency virus type 1 tat mR... 40 2.5
50gb|U44012.1|HIVU44012 Human immunodeficiency virus type 1 tat mR... 40 2.5
51gb|U44011.1|HIVU44011 Human immunodeficiency virus type 1 tat mR... 40 2.5
52gb|U44009.1|HIVU44009 Human immunodeficiency virus type 1 tat mR... 40 2.5
53gb|U44008.1|HIVU44008 Human immunodeficiency virus type 1 tat mR... 40 2.5
54gb|U44002.1|HIVU44002 Human immunodeficiency virus type 1 tat mR... 40 2.5
55gb|U44001.1|HIVU44001 Human immunodeficiency virus type 1 tat mR... 40 2.5
56gb|U44000.1|HIVU44000 Human immunodeficiency virus type 1 tat mR... 40 2.5
57gb|U43998.1|HIVU43998 Human immunodeficiency virus type 1 tat mR... 40 2.5
58gb|U80472.1|HIVU80472 HIV-1 patient VE12 from Venezuela, sample ... 40 2.5
59dbj|D21159.1|RICASP1 Rice Osg4B gene for anther specific protein... 40 2.5
60gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 38 10.0
61ref|XM_874829.1| PREDICTED: Bos taurus similar to nuclear recept... 38 10.0
62ref|XM_874740.1| PREDICTED: Bos taurus similar to nuclear recept... 38 10.0
63ref|XM_603681.2| PREDICTED: Bos taurus similar to nuclear recept... 38 10.0
64gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 38 10.0
65gb|AF422800.4| Pseudomonas oleovorans strain NRRL B-14682 polyhy... 38 10.0
66gb|BC114768.1| Bos taurus cDNA clone MGC:138109 IMAGE:8089193, c... 38 10.0
67emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 38 10.0
68gb|AY044827.1| Sus scrofa H19 gene, complete sequence 38 10.0
69dbj|AP005226.1| Corynebacterium efficiens plasmid pCE3 DNA, comp... 38 10.0
70ref|XM_687171.1| PREDICTED: Danio rerio similar to KIAA1343 prot... 38 10.0
71dbj|AB193030.1| Corynebacterium glutamicum DNA, strain specific ... 38 10.0
72dbj|AB116646.1| Streptomyces albulus kat gene for kanamycin acet... 38 10.0
73gb|AC135324.4| Homo sapiens chromosome 8, clone RP11-42L22, comp... 38 10.0
74ref|XM_345850.2| PREDICTED: Rattus norvegicus nuclear factor of ... 38 10.0
75gb|AF546188.1| Contiguous genomic DNA sequence comprising the 19... 38 10.0
76emb|AL954145.13| Zebrafish DNA sequence from clone CH211-284E20 ... 38 10.0
77tpe|BN000505.3| TPA: TPA_inf: Magnaporthe grisea 70-15 syn8 gene... 38 10.0
78dbj|AB050606.1| Branchiostoma belcheri Amphiop1 mRNA for opsin, ... 38 10.0
79gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 38 10.0 
>dbj|AK119522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D11, full
           insert sequence
          Length = 1468

 Score =  161 bits (81), Expect = 1e-36
 Identities = 140/159 (88%), Gaps = 3/159 (1%)
 Strand = Plus / Plus

                                                                       
Query: 39  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 95
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 33  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 92

                                                                       
Query: 96  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 93  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 152

                                                  
Query: 156 cgacttcatgtccgccgtctccttcaggacatacgcggt 194
           ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 153 cgacttcatgaacgcggtctccttcaggacccacgcggt 191
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>dbj|AK119220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-H03, full
           insert sequence
          Length = 1366

 Score =  161 bits (81), Expect = 1e-36
 Identities = 140/159 (88%), Gaps = 3/159 (1%)
 Strand = Plus / Plus

                                                                       
Query: 39  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 95
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 33  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 92

                                                                       
Query: 96  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 93  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 152

                                                  
Query: 156 cgacttcatgtccgccgtctccttcaggacatacgcggt 194
           ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 153 cgacttcatgaacgcggtctccttcaggacccacgcggt 191
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>dbj|AK104690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G03, full
           insert sequence
          Length = 1540

 Score =  161 bits (81), Expect = 1e-36
 Identities = 140/159 (88%), Gaps = 3/159 (1%)
 Strand = Plus / Plus

                                                                       
Query: 39  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 95
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                       
Query: 96  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157

                                                  
Query: 156 cgacttcatgtccgccgtctccttcaggacatacgcggt 194
           ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggt 196
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>dbj|AK103994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F06, full
           insert sequence
          Length = 1538

 Score =  161 bits (81), Expect = 1e-36
 Identities = 140/159 (88%), Gaps = 3/159 (1%)
 Strand = Plus / Plus

                                                                       
Query: 39  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 95
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                       
Query: 96  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157

                                                  
Query: 156 cgacttcatgtccgccgtctccttcaggacatacgcggt 194
           ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggt 196
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>dbj|AK103932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E09, full
           insert sequence
          Length = 1566

 Score =  161 bits (81), Expect = 1e-36
 Identities = 140/159 (88%), Gaps = 3/159 (1%)
 Strand = Plus / Plus

                                                                       
Query: 39  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 95
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                       
Query: 96  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157

                                                  
Query: 156 cgacttcatgtccgccgtctccttcaggacatacgcggt 194
           ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggt 196
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>dbj|AK103922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B10, full
           insert sequence
          Length = 1473

 Score =  161 bits (81), Expect = 1e-36
 Identities = 140/159 (88%), Gaps = 3/159 (1%)
 Strand = Plus / Plus

                                                                       
Query: 39  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 95
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                       
Query: 96  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157

                                                  
Query: 156 cgacttcatgtccgccgtctccttcaggacatacgcggt 194
           ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggt 196
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>dbj|AK071685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H17, full
           insert sequence
          Length = 1571

 Score =  161 bits (81), Expect = 1e-36
 Identities = 140/159 (88%), Gaps = 3/159 (1%)
 Strand = Plus / Plus

                                                                       
Query: 39  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 95
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 34  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 93

                                                                       
Query: 96  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 94  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 153

                                                  
Query: 156 cgacttcatgtccgccgtctccttcaggacatacgcggt 194
           ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 154 cgacttcatgaacgcggtctccttcaggacccacgcggt 192
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>dbj|AK067817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O22, full
           insert sequence
          Length = 778

 Score =  161 bits (81), Expect = 1e-36
 Identities = 140/159 (88%), Gaps = 3/159 (1%)
 Strand = Plus / Plus

                                                                       
Query: 39  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 95
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 39  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 98

                                                                       
Query: 96  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 99  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 158

                                                  
Query: 156 cgacttcatgtccgccgtctccttcaggacatacgcggt 194
           ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 159 cgacttcatgaacgcggtctccttcaggacccacgcggt 197
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>ref|XM_472744.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1209

 Score =  153 bits (77), Expect = 2e-34
 Identities = 136/155 (87%), Gaps = 3/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 43  atggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgctggag 99
           ||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  ||||
Sbjct: 1   atggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtcggag 60

                                                                       
Query: 100 ttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgacgac 159
           |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61  ttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccgacgac 120

                                              
Query: 160 ttcatgtccgccgtctccttcaggacatacgcggt 194
           ||||||  ||| ||||||||||||||  |||||||
Sbjct: 121 ttcatgaacgcggtctccttcaggacccacgcggt 155
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>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
              complete sequence
          Length = 138969

 Score =  141 bits (71), Expect = 9e-31
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                          
Query: 96     ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
              |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 120791 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 120850

                                                     
Query: 156    cgacttcatgtccgccgtctccttcaggacatacgcggt 194
              ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 120851 cgacttcatgaacgcggtctccttcaggacccacgcggt 120889



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                             
Query: 39     ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 85
              ||||||||||||||||||||||||| | ||||  | |||||||||||
Sbjct: 120634 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 120680
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>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16,
            complete sequence
          Length = 176383

 Score =  141 bits (71), Expect = 9e-31
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                        
Query: 96   ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
            |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6472 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 6531

                                                   
Query: 156  cgacttcatgtccgccgtctccttcaggacatacgcggt 194
            ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 6532 cgacttcatgaacgcggtctccttcaggacccacgcggt 6570



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 39   ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 85
            ||||||||||||||||||||||||| | ||||  | |||||||||||
Sbjct: 6315 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 6361
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  141 bits (71), Expect = 9e-31
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                            
Query: 96       ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 155
                |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 22912016 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 22912075

                                                       
Query: 156      cgacttcatgtccgccgtctccttcaggacatacgcggt 194
                ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 22912076 cgacttcatgaacgcggtctccttcaggacccacgcggt 22912114



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 39       ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 85
                ||||||||||||||||||||||||| | ||||  | |||||||||||
Sbjct: 22911859 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 22911905
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>emb|X15408.1|ZMGPA1 Maize Gpa1 gene for glyceraldehyde-3-phosphate dehydrogenase subunit
            A
          Length = 6414

 Score =  123 bits (62), Expect = 2e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                        
Query: 97   gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 156
            |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||||||
Sbjct: 1703 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 1762

                                                  
Query: 157  gacttcatgtccgccgtctccttcaggacatacgcggt 194
            |||||||||||||||||||||||||||||  |||||||
Sbjct: 1763 gacttcatgtccgccgtctccttcaggacccacgcggt 1800
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>emb|X07157.1|ZMCHGADP Maize cytosolic mRNA for subunit A of chloroplast GAPDH (GapA)
           glyceraldehyde-3-phosphate dehydrogenase
          Length = 1382

 Score =  123 bits (62), Expect = 2e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                       
Query: 97  gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 156
           |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||||||
Sbjct: 1   gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 60

                                                 
Query: 157 gacttcatgtccgccgtctccttcaggacatacgcggt 194
           |||||||||||||||||||||||||||||  |||||||
Sbjct: 61  gacttcatgtccgccgtctccttcaggacccacgcggt 98
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>gb|AY103602.1| Zea mays PCO093211 mRNA sequence
          Length = 1490

 Score =  123 bits (62), Expect = 2e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                       
Query: 97  gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 156
           |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||||||
Sbjct: 91  gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 150

                                                 
Query: 157 gacttcatgtccgccgtctccttcaggacatacgcggt 194
           |||||||||||||||||||||||||||||  |||||||
Sbjct: 151 gacttcatgtccgccgtctccttcaggacccacgcggt 188
to top
>gb|M31481.1|MZENAR1 Maize glyceraldehyde-3-phosphate dehydrogenase mRNA, 5' end
          Length = 386

 Score =  123 bits (62), Expect = 2e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                       
Query: 97  gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 156
           |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||||||
Sbjct: 72  gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 131

                                                 
Query: 157 gacttcatgtccgccgtctccttcaggacatacgcggt 194
           |||||||||||||||||||||||||||||  |||||||
Sbjct: 132 gacttcatgtccgccgtctccttcaggacccacgcggt 169
to top
>gb|M18976.1|MZEG3PD Zea mays chloroplast glyceraldehyde-3-phosphate dehydrogenase gene,
            complete cds, clone lambda-gapA1
          Length = 6414

 Score =  123 bits (62), Expect = 2e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                        
Query: 97   gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 156
            |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||||||
Sbjct: 1703 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 1762

                                                  
Query: 157  gacttcatgtccgccgtctccttcaggacatacgcggt 194
            |||||||||||||||||||||||||||||  |||||||
Sbjct: 1763 gacttcatgtccgccgtctccttcaggacccacgcggt 1800
to top
>gb|AF022730.1|AF022730 Oryza sativa glyceralehyde-3-phosphate dehydrogenase subunit
           (GAPDH) mRNA, partial cds
          Length = 1073

 Score =  117 bits (59), Expect = 1e-23
 Identities = 136/160 (85%), Gaps = 5/160 (3%)
 Strand = Plus / Plus

                                                                       
Query: 39  ggacatggcgtcgcccatgctctccacggccatggcgccactccagggg----ggcatgc 94
           ||||||||||||||| ||||||||| | ||||  | |||||||||||||    ||| || 
Sbjct: 41  ggacatggcgtcgcc-atgctctccgccgccaccgtgccactccaggggaggcggcttgt 99

                                                                       
Query: 95  tggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccg 154
            ||| |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 100 cggatttctccggcctgaggagctcgtcgtcgctgccgctgcggcgggatgccacctccg 159

                                                   
Query: 155 acgacttcatgtccgccgtctccttcaggacatacgcggt 194
           || ||||||||  | | ||||||||||||||  |||||||
Sbjct: 160 acaacttcatgaacccggtctccttcaggacccacgcggt 199
to top
>emb|X15406.1|ZMPGPA1 Maize pseudo-Gpa1 pseudogene for glyceraldehyde-3-phosphate
            dehydrogenase subunit A
          Length = 5922

 Score =  109 bits (55), Expect = 3e-21
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                        
Query: 112  aggagctcgtcgtcgctgccgctccggcggaatgccacctccgacgacttcatgtccgcc 171
            ||||||||  ||||||||||| | || |||||||||||||||||||||||||||||||||
Sbjct: 1757 aggagctccgcgtcgctgccgatgcgccggaatgccacctccgacgacttcatgtccgcc 1816

                                   
Query: 172  gtctccttcaggacatacgcggt 194
            ||||||||||||||  |||||||
Sbjct: 1817 gtctccttcaggacccacgcggt 1839
to top
>emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceraldehyde-3-phosphate
            dehydrogenase subunit A
          Length = 8839

 Score = 89.7 bits (45), Expect = 3e-15
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                        
Query: 112  aggagctcgtcgtcgctgccgctccggcggaatgccacctccgacgacttcatgtccgcc 171
            ||||||||  ||||||||||| | ||  ||||||||||||||||||| ||||||||||||
Sbjct: 4928 aggagctccgcgtcgctgccgatgcgctggaatgccacctccgacgaattcatgtccgcc 4987

                         
Query: 172  gtctccttcagga 184
            |||||||||||||
Sbjct: 4988 gtctccttcagga 5000



 Score = 38.2 bits (19), Expect = 10.0
 Identities = 37/43 (86%)
 Strand = Plus / Plus

                                                       
Query: 42   catggcgtcgcccatgctctccacggccatggcgccactccag 84
            ||||||| |||||||||||||| |  ||| || ||||||||||
Sbjct: 4732 catggcgacgcccatgctctccgccaccacggtgccactccag 4774
to top
>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 46.1 bits (23), Expect = 0.041
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 81     ccaggggggcatgctggagttct 103
              |||||||||||||||||||||||
Sbjct: 154385 ccaggggggcatgctggagttct 154363
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>gb|AY450985.1| HIV-1 isolate NN92/732 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 109 ctgaggagctcgtcgtcgctg 129
           |||||||||||||||||||||
Sbjct: 258 ctgaggagctcgtcgtcgctg 238
to top
>gb|AY450984.1| HIV-1 isolate NN88/732 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 109 ctgaggagctcgtcgtcgctg 129
           |||||||||||||||||||||
Sbjct: 258 ctgaggagctcgtcgtcgctg 238
to top
>gb|U43999.1|HIVU43999 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 109 ctgaggagctcgtcgtcgctg 129
           |||||||||||||||||||||
Sbjct: 207 ctgaggagctcgtcgtcgctg 187
to top
>ref|XM_483629.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 528

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 agctcgtcgtcgctgccgct 134
           ||||||||||||||||||||
Sbjct: 501 agctcgtcgtcgctgccgct 482
to top
>gb|AY734209.1| HIV-1 isolate E089BB from USA tat protein (tat) gene, partial cds
          Length = 297

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 211 tgaggagctcgtcgtcgctg 192
to top
>gb|AY734165.1| HIV-1 isolate E055BB from USA tat protein (tat) gene, partial cds
          Length = 295

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 208 tgaggagctcgtcgtcgctg 189
to top
>gb|AY734164.1| HIV-1 isolate B055BB from USA tat protein (tat) gene, partial cds
          Length = 292

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 208 tgaggagctcgtcgtcgctg 189
to top
>gb|AY734163.1| HIV-1 isolate E055AA from USA tat protein (tat) gene, partial cds
          Length = 285

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 198 tgaggagctcgtcgtcgctg 179
to top
>gb|AY734162.1| HIV-1 isolate B055AA from USA tat protein (tat) gene, partial cds
          Length = 262

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 175 tgaggagctcgtcgtcgctg 156
to top
>gb|DQ396398.1| HIV-1 isolate 03ZAPS045MB2 from South Africa, complete genome
          Length = 9031

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  tgaggagctcgtcgtcgctg 129
            ||||||||||||||||||||
Sbjct: 5443 tgaggagctcgtcgtcgctg 5424
to top
>gb|AY450998.1| HIV-1 isolate SS90/26 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 257 tgaggagctcgtcgtcgctg 238
to top
>gb|AY450969.1| HIV-1 isolate AE96/999260 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 257 tgaggagctcgtcgtcgctg 238
to top
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     tgctggagttctccgggctg 111
              ||||||||||||||||||||
Sbjct: 180213 tgctggagttctccgggctg 180232
to top
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    tgctggagttctccgggctg 111
             ||||||||||||||||||||
Sbjct: 13755 tgctggagttctccgggctg 13774
to top
>gb|AF408629.1| HIV-1 isolate A32879 from Argentina, complete genome
          Length = 9192

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  tgaggagctcgtcgtcgctg 129
            ||||||||||||||||||||
Sbjct: 5575 tgaggagctcgtcgtcgctg 5556
to top
>gb|AY713412.1| HIV-1 isolate 90US_873 from USA gag protein (gag) and pol protein
            (pol) genes, partial cds; and vif protein (vif), vpr
            protein (vpr), tat protein (tat), rev protein (rev), vpu
            protein (vpu), envelope glycoprotein (env), and nef
            protein (nef) genes, complete cds
          Length = 8791

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  tgaggagctcgtcgtcgctg 129
            ||||||||||||||||||||
Sbjct: 5210 tgaggagctcgtcgtcgctg 5191
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      agctcgtcgtcgctgccgct 134
                ||||||||||||||||||||
Sbjct: 27356053 agctcgtcgtcgctgccgct 27356034
to top
>gb|AF326484.1|AF326484 Zea mays NOD26-like membrane integral protein ZmNIP2-1 mRNA,
           complete cds
          Length = 1293

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  ggggggcatgctggagttct 103
           ||||||||||||||||||||
Sbjct: 282 ggggggcatgctggagttct 263
to top
>gb|AY857182.2| HIV-1 isolate 9762120 from Australia, partial genome
          Length = 8415

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  tgaggagctcgtcgtcgctg 129
            ||||||||||||||||||||
Sbjct: 4843 tgaggagctcgtcgtcgctg 4824
to top
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   agctcgtcgtcgctgccgct 134
             ||||||||||||||||||||
Sbjct: 57580 agctcgtcgtcgctgccgct 57561
to top
>gb|AY835778.1| HIV-1 isolate 5018-86 clone pbf6 from USA, complete genome
          Length = 9703

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  tgaggagctcgtcgtcgctg 129
            ||||||||||||||||||||
Sbjct: 6008 tgaggagctcgtcgtcgctg 5989
to top
>gb|AY835777.1| HIV-1 isolate 5018-83 clone pbf4 from USA, complete genome
          Length = 9703

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  tgaggagctcgtcgtcgctg 129
            ||||||||||||||||||||
Sbjct: 6008 tgaggagctcgtcgtcgctg 5989
to top
>gb|U80572.1|HIVU80572 HIV-1 patient TPVIII, sample 1995, tat protein (tat) gene, partial
           cds
          Length = 216

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>gb|U80555.1|HIVU80555 HIV-1 patient LTS16, sample 1995, tat protein (tat) gene, partial
           cds
          Length = 216

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>gb|AF000525.1|AF000525 HIV-1 strain CH94-A2tat from USA, Tat protein (tat) gene, partial
           cds
          Length = 219

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>gb|AF000522.1|AF000522 HIV-1 strain AD93-A3tat from USA, Tat protein (tat) gene, partial
           cds
          Length = 219

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>gb|U44018.1|HIVU44018 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44017.1|HIVU44017 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44012.1|HIVU44012 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44011.1|HIVU44011 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44009.1|HIVU44009 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44008.1|HIVU44008 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44002.1|HIVU44002 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44001.1|HIVU44001 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44000.1|HIVU44000 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U43998.1|HIVU43998 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U80472.1|HIVU80472 HIV-1 patient VE12 from Venezuela, sample 1995, tat protein (tat)
           gene, partial cds
          Length = 216

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 110 tgaggagctcgtcgtcgctg 129
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>dbj|D21159.1|RICASP1 Rice Osg4B gene for anther specific protein, complete cds (exon1,
           exon2)
          Length = 2429

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 agctcgtcgtcgctgccgct 134
           ||||||||||||||||||||
Sbjct: 704 agctcgtcgtcgctgccgct 685
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 85      gggggcatgctggagttctccgg 107
               ||||||||||| |||||||||||
Sbjct: 2441598 gggggcatgcttgagttctccgg 2441576
to top
>ref|XM_874829.1| PREDICTED: Bos taurus similar to nuclear receptor coactivator 4,
           transcript variant 4 (LOC525329), mRNA
          Length = 3463

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  tggagttctccgggctgag 113
           |||||||||||||||||||
Sbjct: 171 tggagttctccgggctgag 189
to top
>ref|XM_874740.1| PREDICTED: Bos taurus similar to nuclear receptor coactivator 4,
           transcript variant 3 (LOC525329), mRNA
          Length = 3357

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  tggagttctccgggctgag 113
           |||||||||||||||||||
Sbjct: 171 tggagttctccgggctgag 189
to top
>ref|XM_603681.2| PREDICTED: Bos taurus similar to nuclear receptor coactivator 4,
           transcript variant 2 (LOC525329), mRNA
          Length = 3490

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  tggagttctccgggctgag 113
           |||||||||||||||||||
Sbjct: 171 tggagttctccgggctgag 189
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 85      gggggcatgctggagttctccgg 107
               ||||||||||| |||||||||||
Sbjct: 3656744 gggggcatgcttgagttctccgg 3656722
to top
>gb|AF422800.4| Pseudomonas oleovorans strain NRRL B-14682 polyhydroxybutyrate
            synthase (phbC) gene, complete cds; and beta-ketothiolase
            (phbA) gene, partial cds
          Length = 2334

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 53   ccatgctctccacggccatggcg 75
            ||||| |||||||||||||||||
Sbjct: 1066 ccatggtctccacggccatggcg 1088
to top
>gb|BC114768.1| Bos taurus cDNA clone MGC:138109 IMAGE:8089193, complete cds
          Length = 3524

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 95  tggagttctccgggctgag 113
           |||||||||||||||||||
Sbjct: 170 tggagttctccgggctgag 188
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 85      gggggcatgctggagttctccgg 107
               ||||||||||| |||||||||||
Sbjct: 3399452 gggggcatgcttgagttctccgg 3399430
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>gb|AY044827.1| Sus scrofa H19 gene, complete sequence
          Length = 56404

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 51    gcccatgctctccacggcc 69
             |||||||||||||||||||
Sbjct: 30221 gcccatgctctccacggcc 30239
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>dbj|AP005226.1| Corynebacterium efficiens plasmid pCE3 DNA, complete sequence
          Length = 48672

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 93    gctggagttctccgggctg 111
             |||||||||||||||||||
Sbjct: 29084 gctggagttctccgggctg 29102
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>ref|XM_687171.1| PREDICTED: Danio rerio similar to KIAA1343 protein (LOC563808),
           mRNA
          Length = 1650

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 116 gctcgtcgtcgctgccgct 134
           |||||||||||||||||||
Sbjct: 121 gctcgtcgtcgctgccgct 103
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>dbj|AB193030.1| Corynebacterium glutamicum DNA, strain specific island 3, strain: R
          Length = 56248

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 93    gctggagttctccgggctg 111
             |||||||||||||||||||
Sbjct: 29505 gctggagttctccgggctg 29523
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>dbj|AB116646.1| Streptomyces albulus kat gene for kanamycin acetyltransferase,
            complete cds
          Length = 5090

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 139  cggaatgccacctccgacg 157
            |||||||||||||||||||
Sbjct: 2264 cggaatgccacctccgacg 2246
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>gb|AC135324.4| Homo sapiens chromosome 8, clone RP11-42L22, complete sequence
          Length = 77514

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 81    ccaggggggcatgctggagttct 103
             |||| ||||||||||||||||||
Sbjct: 22462 ccagcggggcatgctggagttct 22440
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>ref|XM_345850.2| PREDICTED: Rattus norvegicus nuclear factor of kappa light
            polypeptide gene enhancer in B-cells inhibitor-like 2
            (predicted) (Nfkbil2_predicted), mRNA
          Length = 4104

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 88   ggcatgctggagttctccg 106
            |||||||||||||||||||
Sbjct: 2708 ggcatgctggagttctccg 2690
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>gb|AF546188.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family
             from Zea mays, complete sequence
          Length = 203363

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 96    ggagttctccgggctgagg 114
             |||||||||||||||||||
Sbjct: 54476 ggagttctccgggctgagg 54458
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>emb|AL954145.13| Zebrafish DNA sequence from clone CH211-284E20 in linkage group 22,
              complete sequence
          Length = 160871

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 116    gctcgtcgtcgctgccgct 134
              |||||||||||||||||||
Sbjct: 115431 gctcgtcgtcgctgccgct 115413
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>tpe|BN000505.3| TPA: TPA_inf: Magnaporthe grisea 70-15 syn8 gene for putative
            polyketide synthase, exons 1-2
          Length = 13004

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 38   tggacatggcgtcgcccat 56
            |||||||||||||||||||
Sbjct: 7834 tggacatggcgtcgcccat 7852
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>dbj|AB050606.1| Branchiostoma belcheri Amphiop1 mRNA for opsin, complete cds
          Length = 1298

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 93  gctggagttctccgggctg 111
           |||||||||||||||||||
Sbjct: 171 gctggagttctccgggctg 153
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 10.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 85      gggggcatgctggagttctccgg 107
               ||||||||||| |||||||||||
Sbjct: 1449303 gggggcatgcttgagttctccgg 1449325


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,208,237
Number of Sequences: 3902068
Number of extensions: 1208237
Number of successful extensions: 74245
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73716
Number of HSP's gapped (non-prelim): 528
length of query: 200
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 178
effective length of database: 17,147,199,772
effective search space: 3052201559416
effective search space used: 3052201559416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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