Clone Information

BLAST Search Result

Clone Name	baet97d11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloropl...	235	4e-62
2	PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloropl...	180	1e-45
3	PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloropl...	178	6e-45
4	PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplas...	175	4e-44
5	PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloropl...	173	2e-43
6	PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloropl...	170	1e-42
7	PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chlor...	169	2e-42
8	PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chlor...	160	2e-39
9	PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloropl...	155	5e-38
10	PSBO_BRARA (P83504) Oxygen-evolving enhancer protein 1, chloropl...	67	2e-11
11	PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloropl...	55	5e-08
12	PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloropl...	53	3e-07
13	PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloropl...	50	3e-06
14	LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-II...	35	0.058
15	5E5_RAT (Q63003) 5E5 antigen	34	0.13
16	PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypep...	33	0.22
17	PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypep...	33	0.22
18	CHS4_NEUCR (Q01285) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP ...	33	0.22
19	CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor	33	0.37
20	CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor	32	0.49
21	LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-II...	32	0.64
22	ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (...	32	0.83
23	CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family m...	31	1.1
24	PG34_MYCTU (Q50594) Hypothetical PE-PGRS family protein PE_PGRS34	31	1.4
25	CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like pro...	30	1.9
26	CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor	30	1.9
27	FA21C_PONPY (Q5RDC1) Protein FAM21C	30	1.9
28	VNUA_PRVKA (P33485) Probable nuclear antigen	30	1.9
29	LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related pr...	30	1.9
30	LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related pr...	30	1.9
31	ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing pro...	30	1.9
32	GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding f...	30	2.4
33	CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar col...	30	2.4
34	FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related p...	30	2.4
35	CRP_MOUSE (P14847) C-reactive protein precursor	30	2.4
36	CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor	30	2.4
37	AVEN_HUMAN (Q9NQS1) Cell death regulator Aven	30	2.4
38	IGSF8_MOUSE (Q8R366) Immunoglobulin superfamily member 8 precurs...	30	2.4
39	XYNA_ASPKA (P33559) Endo-1,4-beta-xylanase A precursor (EC 3.2.1...	30	3.2
40	FA21C_HUMAN (Q9Y4E1) Protein FAM21C	30	3.2
41	SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)	30	3.2
42	KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C...	30	3.2
43	YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon ...	27	3.4
44	TRPE2_HALSA (Q9HS66) Anthranilate synthase component 1 2 (EC 4.1...	29	4.1
45	SMC1A_RAT (Q9Z1M9) Structural maintenance of chromosome 1-like 1...	29	4.1
46	SMC1A_MOUSE (Q9CU62) Structural maintenance of chromosome 1-like...	29	4.1
47	SMC1A_HUMAN (Q14683) Structural maintenance of chromosome 1-like...	29	4.1
48	SMC1A_BOVIN (O97593) Structural maintenance of chromosome 1-like...	29	4.1
49	RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Reti...	29	4.1
50	ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoce...	29	4.1
51	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	29	4.1
52	SMC1A_XENLA (O93308) Structural maintenance of chromosome 1 prot...	29	4.1
53	SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro...	29	5.4
54	GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outg...	29	5.4
55	VGLD_BHV1P (P24906) Glycoprotein D precursor (Glycoprotein IV)	29	5.4
56	THIC_RHOPA (P61427) Thiamine biosynthesis protein thiC	29	5.4
57	RPOB_DECAR (Q47JB0) DNA-directed RNA polymerase beta chain (EC 2...	28	7.1
58	ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC...	28	7.1
59	VGLD_BHV1S (Q08100) Glycoprotein D precursor (Glycoprotein IV)	28	7.1
60	CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)	28	7.1
61	RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine syntha...	28	7.1
62	OCD1_RHIME (P58338) Ornithine cyclodeaminase 1 (EC 4.3.1.12) (OC...	28	7.1
63	34KD_MYCTU (P65637) 34 kDa antigenic protein homolog	28	7.1
64	34KD_MYCBO (P65638) 34 kDa antigenic protein homolog	28	7.1
65	NH103_CAEEL (O16359) Nuclear hormone receptor family member nhr-103	28	7.1
66	NIR_BETVE (P38500) Ferredoxin--nitrite reductase, chloroplast pr...	28	9.2
67	WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interactin...	28	9.2
68	OPN4_HUMAN (Q9UHM6) Melanopsin (Opsin-4)	28	9.2
69	DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-con...	28	9.2
70	WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interactin...	28	9.2
71	CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor	28	9.2
72	KCNC3_RAT (Q01956) Potassium voltage-gated channel subfamily C m...	28	9.2
73	CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor	28	9.2
74	PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypep...	28	9.2
75	BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (...	28	9.2
76	AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)	28	9.2

>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score =  235 bits (599), Expect = 4e-62
 Identities = 120/124 (96%), Positives = 122/124 (98%)
 Frame = +3

Query: 57  MAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAA 236
           MAASLQAAAT+MPAKIGGRASS RPSSHVARAFGVDA ARITCSLQSDIREVASKCADAA
Sbjct: 1   MAASLQAAATVMPAKIGGRASSARPSSHVARAFGVDAGARITCSLQSDIREVASKCADAA 60

Query: 237 KMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPF 416
           KMAGFALATSALLVSGA+AEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPF
Sbjct: 61  KMAGFALATSALLVSGATAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSFPF 120

Query: 417 KAGK 428
           KAGK
Sbjct: 121 KAGK 124

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>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  180 bits (457), Expect = 1e-45
 Identities = 89/127 (70%), Positives = 110/127 (86%), Gaps = 3/127 (2%)
 Frame = +3

Query: 57  MAASLQAAATLMPAKIGGRASS-VRPSSHVARAFGVD--AAARITCSLQSDIREVASKCA 227
           MA+SLQAAATL+PAK+G  A + +R +SH+++AFG D   A R+TCS+ SD+R++A KC 
Sbjct: 1   MASSLQAAATLIPAKVGAPARTHLRSNSHLSKAFGFDNSTAGRLTCSINSDLRDIAQKCT 60

Query: 228 DAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDS 407
           DAAK+AGFALATSAL++SGASAEG PKRLTFDEIQSKTYMEVKG+GTANQCPTI+GG +S
Sbjct: 61  DAAKLAGFALATSALVISGASAEGVPKRLTFDEIQSKTYMEVKGSGTANQCPTIEGGTES 120

Query: 408 FPFKAGK 428
           F +K GK
Sbjct: 121 FGYKTGK 127

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>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score =  178 bits (451), Expect = 6e-45
 Identities = 93/130 (71%), Positives = 112/130 (86%), Gaps = 6/130 (4%)
 Frame = +3

Query: 57  MAASLQAAATLM-PAKIGGRAS----SVRPSSHVARAFGVD-AAARITCSLQSDIREVAS 218
           MAASLQAAATLM P K+GG ++     +R S  V++AFG++ +A+R++CSLQ+D+++ A 
Sbjct: 1   MAASLQAAATLMQPTKVGGVSARNNLQLRSSQSVSKAFGLEPSASRLSCSLQTDLKDFAQ 60

Query: 219 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 398
           KC DAAK+AGFALATSAL+VSGA+AEG PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG
Sbjct: 61  KCTDAAKIAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 120

Query: 399 VDSFPFKAGK 428
           VDSF FK GK
Sbjct: 121 VDSFAFKPGK 130

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>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  175 bits (444), Expect = 4e-44
 Identities = 90/126 (71%), Positives = 107/126 (84%), Gaps = 2/126 (1%)
 Frame = +3

Query: 57  MAASLQAAATLM-PAKIGGRASSVRPSSHVARAFGVDA-AARITCSLQSDIREVASKCAD 230
           MAASLQAAATLM P K+      ++ +  V++AFG++   A++TCSLQSD +E+A KC +
Sbjct: 1   MAASLQAAATLMQPTKLRSNTLQLKSNQSVSKAFGLEHYGAKVTCSLQSDFKELAHKCVE 60

Query: 231 AAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDSF 410
           A+K+AGFALATSAL+VSGASAEGAPKRLTFDEIQSKTY+EVKGTGTANQCPTIDGGVDSF
Sbjct: 61  ASKIAGFALATSALVVSGASAEGAPKRLTFDEIQSKTYLEVKGTGTANQCPTIDGGVDSF 120

Query: 411 PFKAGK 428
            FK GK
Sbjct: 121 SFKPGK 126

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>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  173 bits (438), Expect = 2e-43
 Identities = 91/127 (71%), Positives = 109/127 (85%), Gaps = 3/127 (2%)
 Frame = +3

Query: 57  MAASLQAAATLM-PAKIGGRAS-SVRPSSHVARAFGVD-AAARITCSLQSDIREVASKCA 227
           MAASLQAAATLM P K+G R +  +R +  V++AFGV+  + R+TCSLQ++I+E+A KC 
Sbjct: 1   MAASLQAAATLMQPTKVGVRNNLQLRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCT 60

Query: 228 DAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDS 407
           DAAK+AGFALATSAL+VSGA+AEG PKRLT+DEIQSKTYMEVKGTGTANQCPTI+GGV S
Sbjct: 61  DAAKIAGFALATSALVVSGANAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIEGGVGS 120

Query: 408 FPFKAGK 428
           F FK GK
Sbjct: 121 FAFKPGK 127

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>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  170 bits (431), Expect = 1e-42
 Identities = 92/130 (70%), Positives = 109/130 (83%), Gaps = 6/130 (4%)
 Frame = +3

Query: 57  MAASLQAAATLM-PAKIGGRAS----SVRPSSHVARAFGVD-AAARITCSLQSDIREVAS 218
           MAASLQAAATLM P K+G   +     +R +  V++AFGV+ AAAR+TCSLQ++++++A 
Sbjct: 1   MAASLQAAATLMQPTKVGVAPARNNLQLRSAQSVSKAFGVEPAAARLTCSLQTELKDLAQ 60

Query: 219 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 398
           K  DAAK+AGFALATSAL+VSGA+AEG PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG
Sbjct: 61  KFTDAAKVAGFALATSALVVSGANAEGVPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 120

Query: 399 VDSFPFKAGK 428
           V SF FK GK
Sbjct: 121 VASFAFKPGK 130

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>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score =  169 bits (429), Expect = 2e-42
 Identities = 90/129 (69%), Positives = 107/129 (82%), Gaps = 5/129 (3%)
 Frame = +3

Query: 57  MAASLQAAAT-LMPAKIGGRASS---VRPSSHVARAFGVDAA-ARITCSLQSDIREVASK 221
           MA SLQAAAT L PAKI    S    +R +  V ++FG+D++ AR+TCSL SD+++ A K
Sbjct: 1   MATSLQAAATFLQPAKIAASPSRNVHLRSNQTVGKSFGLDSSQARLTCSLHSDLKDFAGK 60

Query: 222 CADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV 401
           C+DAAK+AGFALATSAL+VSGA AEGAPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGG 
Sbjct: 61  CSDAAKIAGFALATSALVVSGAGAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGS 120

Query: 402 DSFPFKAGK 428
           ++F FKAGK
Sbjct: 121 ETFSFKAGK 129

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>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score =  160 bits (404), Expect = 2e-39
 Identities = 87/130 (66%), Positives = 105/130 (80%), Gaps = 6/130 (4%)
 Frame = +3

Query: 57  MAASLQAAAT-LMPAKIG---GRASS-VRPSSHVARAFGVD-AAARITCSLQSDIREVAS 218
           MAASLQ+ AT L  AKI     R SS +R +  V ++FG++ ++AR+TCS QSD ++   
Sbjct: 1   MAASLQSTATFLQSAKIATAPSRGSSHLRSTQAVGKSFGLETSSARLTCSFQSDFKDFTG 60

Query: 219 KCADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGG 398
           KC+DA K+AGFALATSAL+VSGASAEGAPKRLT+DEIQSKTYMEVKGTGTANQCPTIDGG
Sbjct: 61  KCSDAVKIAGFALATSALVVSGASAEGAPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGG 120

Query: 399 VDSFPFKAGK 428
            ++F FK GK
Sbjct: 121 SETFSFKPGK 130

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>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  155 bits (391), Expect = 5e-38
 Identities = 82/129 (63%), Positives = 105/129 (81%), Gaps = 5/129 (3%)
 Frame = +3

Query: 57  MAASLQAAAT-LMPAKIGGRAS-SVRPSSHVARAFGVDAAA---RITCSLQSDIREVASK 221
           MAASLQA+ T L P K+  R +  +R + +V +AFGV++A+   R++ SLQSD++E+A+K
Sbjct: 1   MAASLQASTTFLQPTKVASRNTLQLRSTQNVCKAFGVESASSGGRLSLSLQSDLKELANK 60

Query: 222 CADAAKMAGFALATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGV 401
           C DA K+AG ALATSAL+ SGA+AEG  KRLT+DEIQSKTY+EVKGTGTANQCPT++GGV
Sbjct: 61  CVDATKLAGLALATSALIASGANAEGG-KRLTYDEIQSKTYLEVKGTGTANQCPTVEGGV 119

Query: 402 DSFPFKAGK 428
           DSF FK GK
Sbjct: 120 DSFAFKPGK 128

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>PSBO_BRARA (P83504) Oxygen-evolving enhancer protein 1, chloroplast (OEE1)|
           (Fragment)
          Length = 31

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 30/31 (96%), Positives = 31/31 (100%)
 Frame = +3

Query: 294 EGAPKRLTFDEIQSKTYMEVKGTGTANQCPT 386
           EGAPKRLT+DEIQSKTYMEVKGTGTANQCPT
Sbjct: 1   EGAPKRLTYDEIQSKTYMEVKGTGTANQCPT 31

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>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +3

Query: 132 SSHVARAFGVDAAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAEGAPKR 311
           ++   +A GV  AAR           V +     A+   F  A +A++ + A   G+   
Sbjct: 3   AAQTVKAAGVSRAAR----------PVRANVVCKAQKVEFGQAAAAVVAASALVAGSANA 52

Query: 312 LTFDEIQSKTYMEVKGTGTANQCPTID-GGVDSFPFKAG 425
           LT+DE+Q  TY++VKGTG AN CP ++ G  D     AG
Sbjct: 53  LTYDELQGLTYLQVKGTGIANTCPVLEKGSTDLSELSAG 91

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>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
 Frame = +3

Query: 168 AARITCSLQSDIREVASKCADA----AKMAGFALATSALLVSGASAEGAPKRLTFDEIQS 335
           A R   S ++ +R      A A    A+  G A A +AL    A   G+   LTFDEIQ 
Sbjct: 2   ALRAAQSAKAGVRAARPNRATAVVCKAQKVGQAAAAAALAT--AMVAGSANALTFDEIQG 59

Query: 336 KTYMEVKGTGTANQCPTIDGGVDSF-PFKAG 425
            TY++VKG+G AN CP ++ G  +    KAG
Sbjct: 60  LTYLQVKGSGIANTCPVLESGTTNLKELKAG 90

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>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +3

Query: 234 AKMAGFALATSALLVSGASAEGA-PKRLTFDEIQSKTYMEVKGTGTANQCPTIDGGVDS- 407
           A +AG   A  A L+  A A  A    LT+DE+QS +Y+EVK +G A  CP +  GV S 
Sbjct: 69  AVLAGAGRAMGAALIGAAVAGSANAASLTYDELQSLSYLEVKSSGIAGTCPVLADGVSSK 128

Query: 408 FPFKAGK 428
              KAGK
Sbjct: 129 LSLKAGK 135

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>LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 4 precursor
          Length = 635

 Score = 35.4 bits (80), Expect = 0.058
 Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
 Frame = -3

Query: 377 LVRGAGTLHLHVGLALDFVEGQPLG----------------RPLRTCARDEEGRGCEGEA 246
           LVRG G  +  + L L  V+ Q  G                RP R+C+ D    GC G A
Sbjct: 538 LVRGRGAGNGRLPLKLSHVQSQTNGGPSPTPKAHPPRSPPPRPQRSCSLDLGDAGCYGYA 597

Query: 245 GHLGGVGALACDLPDVGLQGA--RDPGGSVD 159
             LGG  A        GL GA  R  GGS +
Sbjct: 598 RRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 628

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>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 35/102 (34%), Positives = 38/102 (37%), Gaps = 4/102 (3%)
 Frame = -3

Query: 368 GAGTLHLHVGLALDFVEGQPLGRPLRTCARD-EEGRGCEGEAGHLGGVGALACDLPDVGL 192
           GA T H H             GR  R   R    G G     G  GG G         GL
Sbjct: 543 GAPTAHAHAVPGPGPAAATLGGRGRRGSWRGGRRGGGAGASGGGRGGRGRGRGGRRGSGL 602

Query: 191 QGARDPGGSVDAERPGDVRRRPHG---GGPAADLGRHQRGRG 75
            G R+  GS  A R G+ RRR HG    G A    R +R RG
Sbjct: 603 SGTREDAGSPSARR-GEQRRRGHGPPAAGAAQVSTRGRRARG 643

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>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +3

Query: 255 LATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTID 392
           +AT   +  G  +  AP    F   Q+ TY ++ GTG AN+CPT+D
Sbjct: 7   MATLLAVCLGIFSLSAP---AFAAKQTLTYDDIVGTGLANKCPTLD 49

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>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = +3

Query: 255 LATSALLVSGASAEGAPKRLTFDEIQSKTYMEVKGTGTANQCPTID 392
           +AT   +  G  +  AP    F   Q+ TY ++ GTG AN+CPT+D
Sbjct: 7   MATLLAVCLGIFSLSAP---AFAAKQTLTYDDIVGTGLANKCPTLD 49

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>CHS4_NEUCR (Q01285) Chitin synthase 4 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 4) (Class-IV chitin
           synthase 4)
          Length = 1195

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 13/136 (9%)
 Frame = +3

Query: 21  DRSSRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSD 200
           +R +R P  PT MA+   A   L P  I G+ +  R S   + A+G  ++          
Sbjct: 567 ERGNRKPGLPTTMASQNAAGQLLHPGTIYGQGNESRSSFLKSDAYGSSSSPADGPGPAGF 626

Query: 201 IREVASKCADAAKMA-GFALATSALLVSGASAEGAPKRLTFDEIQSKTYME--------- 350
           I E       +  M  GF LA +  LV+  S      R T D I    Y           
Sbjct: 627 IHEAVVPQPPSDWMPFGFPLAHTICLVTAYSEGEMGVRTTLDSIAMTDYPNSHKVILVIC 686

Query: 351 ---VKGTGTANQCPTI 389
              +KG G  +  P I
Sbjct: 687 DGIIKGHGEEHSTPDI 702

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>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor|
          Length = 1022

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
 Frame = -3

Query: 320 EGQPLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGD 141
           +G P  +  R     E  RG  GE G+ G  G       D GL G R P G+V    PG+
Sbjct: 435 KGGPGAKGERGDPGPEGPRGLPGEVGNKGARG-------DQGLPGPRGPTGAVG--EPGN 485

Query: 140 VRRRPHGG--GPAADLG----RHQRGR 78
           +  R   G  GP  D G    +  RGR
Sbjct: 486 IGSRGDPGDLGPRGDAGPPGPKGDRGR 512

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>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor|
          Length = 684

 Score = 32.3 bits (72), Expect = 0.49
 Identities = 34/93 (36%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
 Frame = -3

Query: 341 GLALDFVEGQPLGRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPD-----VGLQGAR- 180
           G A +  E  P G P      D    G  GEAGH G  GAL    P       G QG + 
Sbjct: 352 GRAGELGEAGPSGEP--GVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKG 409

Query: 179 ---DPGGSVDAERPGDVRRRPHGG--GPAADLG 96
              DPG        GDV  R  GG  GP  D G
Sbjct: 410 SMGDPGLPGPQGLRGDVGDRGPGGAAGPKGDQG 442

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>LRFN4_MOUSE (Q80XU8) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 4 precursor
          Length = 636

 Score = 32.0 bits (71), Expect = 0.64
 Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 19/92 (20%)
 Frame = -3

Query: 377 LVRGAGTLHLHVGLALDFVEGQPLG----------------RPLRTCARD-EEGRGCEGE 249
           LVRG G  +  + L L  V+ Q  G                RP R+C+ D  +  GC G 
Sbjct: 538 LVRGRGAGNGRLPLKLSHVQSQTNGGTSPMPKSHPPRSPPPRPQRSCSLDLGDTGGCYGY 597

Query: 248 AGHLGGVGALACDLPDVGLQGA--RDPGGSVD 159
           A  LGG  A        GL GA  R  GGS +
Sbjct: 598 ARRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 629

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>ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (Zinc finger|
           DHHC domain-containing protein 18) (DHHC-18)
          Length = 388

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = +1

Query: 142 SPGRSASTLPPGSRAP---CNPTSGRSQA--SAPTPPRW 243
           SPG +     PG+R P    +PT G   A  +AP PPRW
Sbjct: 10  SPGAAPLPASPGARRPGPAASPTPGPGPAPPAAPAPPRW 48

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>CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family member 1)|
           (LAGE-1 protein) (ESO-2 protein)
          Length = 210

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 14/74 (18%)
 Frame = -3

Query: 272 EGRGCEGEAGHLGGVGALACDLPD-----------VGLQGARDP--GGSVDAERP-GDVR 135
           EGRG  G  G   G G     +PD            G  G R P   G+  A  P G   
Sbjct: 4   EGRGTGGSTGDADGPGGPG--IPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGAP 61

Query: 134 RRPHGGGPAADLGR 93
           R PHGG  +A  GR
Sbjct: 62  RGPHGGAASAQDGR 75

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>PG34_MYCTU (Q50594) Hypothetical PE-PGRS family protein PE_PGRS34|
          Length = 515

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 26/82 (31%), Positives = 30/82 (36%)
 Frame = -3

Query: 269 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 90
           G G  G AG  GG G     L   G  G   P G+ D    GD R   + GG    +G  
Sbjct: 228 GLGKAGFAGGAGGTGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGN-GGDGGSVGAA 286

Query: 89  QRGRGLERRCHVGRWAWYAGRS 24
             G G       G W +  G S
Sbjct: 287 PTGIGNGGNGGNGGWLYGDGGS 308

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>CRUM2_HUMAN (Q5IJ48) Crumbs homolog 2 precursor (Crumbs-like protein 2)|
          Length = 1285

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 353 HLHVGLALDFVEGQPLGRPLRTCARDEEGRGC 258
           H+HVG  L   + QP G P R C +D    GC
Sbjct: 744 HVHVGGRLLAADSQPWGGPFRGCLQDLRLDGC 775

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>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
 Frame = -3

Query: 263  GCEGEAGHLGGVGAL-----ACDLPDVGLQGAR-DPGGSVDAERPGDVRRRPHGGGP--A 108
            G +GE GH+G +G +     A +  D GL G +  PG   D   PG +    H G P  A
Sbjct: 1397 GPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPPGVA 1456

Query: 107  ADLGR 93
              LG+
Sbjct: 1457 GPLGQ 1461

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>FA21C_PONPY (Q5RDC1) Protein FAM21C|
          Length = 1340

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
 Frame = +3

Query: 51  TNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCAD 230
           ++ +AS    A L+P K+    S           FG  AA R T SLQ+   E A     
Sbjct: 548 SSQSASKLKGAPLLPGKLPTSVSLFEDEDEEDNLFGGTAAKRQTLSLQAQGEEKAKASEL 607

Query: 231 AAKMAGFALATSALLVSGASAE--GAPKRLTFDEIQSKTYMEVKGTGT 368
           + K A      SALL S    +    P   T     S++  E + +GT
Sbjct: 608 SKKKA------SALLFSSDEEDQWNIPASQTHSASDSRSKGESRDSGT 649

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
 Frame = -3

Query: 173  GGSVDAERPGDVRRRPHGG--GPAADLGRHQRGRG--LERRCHVGRWAWYAG 30
            G ++ A  PG +R R  GG  G     GR  RGRG    RR   G   W AG
Sbjct: 1378 GAALPARGPGGLRGRGRGGRGGGGGGGGRGPRGRGGRRRRRWRPGAGEWGAG 1429

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>LRP1B_MOUSE (Q9JI18) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
 Frame = +3

Query: 171  ARITCSLQSDIREVASK--CADAAKMAGFALATSALLVSGASAEGA-----------PKR 311
            AR+  SL++ I     K  C  A  + G    T    ++ A+ +G+           P  
Sbjct: 1678 ARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMANMDGSNSKILFQNQKEPVG 1737

Query: 312  LTFDEIQSKTYMEVKGTGTANQCPTIDGG 398
            L+ D +++K Y    G GT N+C  +DGG
Sbjct: 1738 LSIDYVENKLYWISSGNGTINRC-NLDGG 1765

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>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
 Frame = +3

Query: 171  ARITCSLQSDIREVASK--CADAAKMAGFALATSALLVSGASAEGA-----------PKR 311
            AR+  SL++ I     K  C  A  + G    T    ++ A+ +G+           P  
Sbjct: 1678 ARLDGSLKTSIIHGIDKPQCLAAHPVRGKLYWTDGNTINMANMDGSNSKILFQNQKEPVG 1737

Query: 312  LTFDEIQSKTYMEVKGTGTANQCPTIDGG 398
            L+ D +++K Y    G GT N+C  +DGG
Sbjct: 1738 LSIDYVENKLYWISSGNGTINRC-NLDGG 1765

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>ZFNL1_ARATH (Q84W91) Zinc finger CCCH type domain-containing protein ZFN-like 1|
          Length = 468

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = +3

Query: 9   NHE*DRSSRVPSPPTNMAASLQAAATLMPAKIGGRASSVR------PSSHVARAFG 158
           +H     + VP PP +      +  +LMP + GG +SS+R      P S++  A+G
Sbjct: 160 HHPQPAGTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYG 215

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>GATA6_HUMAN (Q92908) Transcription factor GATA-6 (GATA-binding factor 6)|
          Length = 449

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
 Frame = -3

Query: 413 GEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRPLRTCARDEEGRGCEGEAGHLG 234
           G G  AA  G A   GAG+   HV     +    P+       AR+  G    G     G
Sbjct: 90  GSGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMA---NGAAREPGGYAAAGS----G 142

Query: 233 GVGALACDLPDVGLQGARDPG-GSVDAERP 147
           G G ++     +   G R+P   S+ A RP
Sbjct: 143 GAGGVSGGGSSLAAMGGREPQYSSLSAARP 172

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>CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar collagen)|
           (Fragment)
          Length = 547

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -3

Query: 266 RGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGR 93
           +G +GE G L G+   +      G  G   P G+  A +PG +R +P   GP  DLGR
Sbjct: 27  QGPDGEPG-LPGLPGQSGKSGASGQPGVPGPVGA--AGKPGSIRGQPGPPGPPGDLGR 81

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>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)|
           (Forkhead-related transcription factor 3) (FREAC-3)
          Length = 553

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/56 (33%), Positives = 23/56 (41%)
 Frame = -3

Query: 269 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAAD 102
           G G  G AG  GG G   C+L  + L  A + GG +     G        GG A D
Sbjct: 377 GGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGG-------AGGSAVD 425

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>CRP_MOUSE (P14847) C-reactive protein precursor|
          Length = 225

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 30  SRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAA 170
           S +P  PT++ AS ++A  ++   I G+A  VR S H     G DA+
Sbjct: 106 SEIPEAPTHICASWESATGIVEFWIDGKA-KVRKSLHKGYTVGPDAS 151

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>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor|
          Length = 675

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -3

Query: 263 GCEGEAGHLGGVGALACDLPDVGLQGARDPGG---SVDAERPGDVRRRPHGGGPAADLG 96
           G +G  GH GG G +  +  + G  G   P G   SV  + P  +R  P   GPA D G
Sbjct: 186 GFKGHTGHKGGPGEIGKE-GEKGSPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAGDRG 243

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>AVEN_HUMAN (Q9NQS1) Cell death regulator Aven|
          Length = 362

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -3

Query: 188 GARDPGGSVDAERPG---DVRRRPHGGGPAADLGRHQRGRG 75
           G   PGG   +ERPG    V R   GGG     GR  RGRG
Sbjct: 16  GRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRG 56

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>IGSF8_MOUSE (Q8R366) Immunoglobulin superfamily member 8 precursor (CD81|
           partner 3) (Glu-Trp-Ile EWI motif containing protein 2)
           (EWI-2) (Keratinocytes-associated transmembrane protein
           4) (KCT-4) (Prostaglandin regulatory-like protein)
           (CD316 antigen)
          Length = 611

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 29/76 (38%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
 Frame = -3

Query: 323 VEGQPLGRPLRTC---ARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAE 153
           V G P G  L       R EEG    G A  +GGVG        V   G R  GG V  E
Sbjct: 464 VRGGPPGLRLAASWWVERPEEGELSSGPAQLVGGVGQ-----DGVAELGVRPGGGPVSVE 518

Query: 152 --RPGDVRRRPHGGGP 111
              P   R R HG GP
Sbjct: 519 LVGPRSHRLRLHGLGP 534

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>XYNA_ASPKA (P33559) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase|
           A) (1,4-beta-D-xylan xylanohydrolase A)
          Length = 327

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -1

Query: 172 AAASTPNARATCDDGRTEEARPPILAG-ISVAAAWRDAAMLVGGLGTR 32
           A A+ PNA+   +D   + A  P LAG +S    W +A + + G+G++
Sbjct: 186 ARAADPNAKLYINDYNLDSASYPKLAGMVSHVKKWIEAGIPIDGIGSQ 233

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>FA21C_HUMAN (Q9Y4E1) Protein FAM21C|
          Length = 1320

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +3

Query: 51  TNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCAD 230
           ++ +AS    A+L+P K+    S           FG  AA + T SLQ+  RE  +K ++
Sbjct: 549 SSQSASNLKGASLLPGKLPTSVSLFDDEDEEDNLFGGTAAKKQTLSLQAQ-REEKAKASE 607

Query: 231 AAKMAGFALATSA 269
            +K    AL  S+
Sbjct: 608 LSKKKASALLFSS 620

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>SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)|
          Length = 747

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 21/65 (32%), Positives = 28/65 (43%)
 Frame = -3

Query: 269 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAADLGRH 90
           G   +G  G LGG GA       +G QGA    G+  A   G   +  +GG  +   GR 
Sbjct: 11  GGAGQGGYGGLGGQGAGQGGYGGLGGQGAGQGAGAAAAAAAGGAGQGGYGGLGSQGAGRG 70

Query: 89  QRGRG 75
            +G G
Sbjct: 71  GQGAG 75

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>KCNC3_HUMAN (Q14003) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 757

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = -3

Query: 185 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 75
           A  P G      PG  R  P  G PAA +GRH  G G
Sbjct: 49  AASPAGPPAPRGPGGRRAEPCPGLPAAAMGRHGGGGG 85

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>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 26.6 bits (57), Expect(2) = 3.4
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
 Frame = +3

Query: 39  PSPPTNMAASLQAAATLMPA--KIGGRA--SSVRPSSHVAR 149
           P PP + A+S QAAA   P+  ++  R   S+ RPSS  AR
Sbjct: 235 PRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPAR 275



 Score = 21.6 bits (44), Expect(2) = 3.4
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
 Frame = +1

Query: 151 RSASTLPPGSRAPCNPTSGRSQAS---APTPP 237
           R+ +   P  R P  PT  R +A+   +P PP
Sbjct: 300 RAPAGCSPARRTPSAPTDRRCRAARRGSPRPP 331

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>TRPE2_HALSA (Q9HS66) Anthranilate synthase component 1 2 (EC 4.1.3.27)|
           (Anthranilate synthase component I 2)
          Length = 488

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 23/74 (31%), Positives = 32/74 (43%)
 Frame = -3

Query: 422 GLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRPLRTCARDEEGRGCEGEAG 243
           G +G+    ++  R LVR A T HL VG  +   +  P      T A+    R      G
Sbjct: 418 GFDGDAT-LSITIRTLVRRAATYHLRVGAGI-VHDSTPAAEYDETLAK---ARALVTALG 472

Query: 242 HLGGVGALACDLPD 201
             GG+G +A   PD
Sbjct: 473 DAGGIGRVADTTPD 486

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>SMC1A_RAT (Q9Z1M9) Structural maintenance of chromosome 1-like 1 protein|
           (SMC-protein)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 428 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 297
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

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>SMC1A_MOUSE (Q9CU62) Structural maintenance of chromosome 1-like 1 protein|
           (SMC1alpha protein) (Chromosome segregation protein
           SmcB) (Sb1.8)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 428 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 297
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

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>SMC1A_HUMAN (Q14683) Structural maintenance of chromosome 1-like 1 protein|
           (SMC1alpha protein) (DXS423E protein) (Sb1.8)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 428 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 297
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

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>SMC1A_BOVIN (O97593) Structural maintenance of chromosome 1-like 1 protein|
           (SMC-protein)
          Length = 1233

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 428 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 297
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

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>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa|
            1-like protein 1)
          Length = 1859

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +3

Query: 48   PTNMAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITC 185
            PT +AAS Q    L+ +K G  +S    SS VA+     A A I C
Sbjct: 1044 PTKVAASTQIMKALLGSKPGRPSSLPEVSSTVAQRLSSSAGAFIAC 1089

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>ADRB1_MACMU (P47899) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1|
           adrenoreceptor)
          Length = 480

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +3

Query: 30  SRVPSPPTNMAASLQAAATLMPAKIGGRASSVRPSSHVA 146
           S VP+PP        AAAT  P  + GRA   RPS  VA
Sbjct: 282 SPVPAPPPGPPRPAAAAATTAPL-VNGRAGKRRPSRLVA 319

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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 22/64 (34%), Positives = 23/64 (35%)
 Frame = -3

Query: 305 GRPLRTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRP 126
           GRP R       GR   G  G+ GG GA               PG    A   G  R RP
Sbjct: 272 GRPGRPGGAPGAGRPGGGGGGYRGGGGA---------------PGAGAGAPAGGGFRGRP 316

Query: 125 HGGG 114
            GGG
Sbjct: 317 GGGG 320

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>SMC1A_XENLA (O93308) Structural maintenance of chromosome 1 protein (xSMC1)|
          Length = 1232

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 428 LAGLEGEGVDAAVDGRALVRGAGTLHLHVGLALDFVEGQPLGRP 297
           + G  G G    +D  + V G  T +L V    D + G P+G+P
Sbjct: 30  IIGPNGSGKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKP 73

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>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3223

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = -3

Query: 185 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 75
           A  P     AE+PGD   RP   GPA   GR + G G
Sbjct: 552 AAQPPSPSSAEKPGDEPGRPRSRGPA---GRTEPGEG 585

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>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 1008

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 142 SPGRSASTLPPGSRAPCNPTSGRS-QASAPTPPR 240
           SP   A+  PPG R   N T   S +ASAP PPR
Sbjct: 776 SPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPR 809

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>VGLD_BHV1P (P24906) Glycoprotein D precursor (Glycoprotein IV)|
          Length = 417

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
 Frame = -3

Query: 284 ARDEEGR------GCEGEAGHLGGVGALACDLPDV--GLQGARDPGGSVDAERP 147
           AR++EG       G EG  G  G  G      P+   G +G   PG S DA+RP
Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESQTPEANGGAEGEPKPGPSPDADRP 336

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>THIC_RHOPA (P61427) Thiamine biosynthesis protein thiC|
          Length = 666

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +3

Query: 183 CSLQ--SDIREVASKCADAAKMAGFALATSALLVSGASAEG-APKRLTFDEIQSKTYMEV 353
           CS++   D+R+ A+   D  K A + +  + + +SG   +G A     F E+ S  Y++ 
Sbjct: 596 CSMKITQDVRDYAAGLGDNEKAALYPVGHAGMTISGTIEDGMAQMSAKFKEMGSSVYLDA 655

Query: 354 KGTGTANQ 377
           +    +N+
Sbjct: 656 EKVKESNK 663

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>RPOB_DECAR (Q47JB0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1427

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = +3

Query: 60   AASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAAK 239
            A+ ++  +  +P+ I G    V+    V    G++   R    +   +R      AD  +
Sbjct: 985  ASDVKDTSLRVPSGIAGTVIDVQ----VFTREGIERDKRAQAIIDEHLRHYKLDLADQMR 1040

Query: 240  MAGF-ALATSALLVSGASAEGAPKRLTFDEIQSKTYME 350
            +    A A    L++G  A G PK+L    +  K Y++
Sbjct: 1041 IVERDAFARVERLITGKKANGGPKKLAKGTVIDKVYLD 1078

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>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF|
            2) (6-deoxyerythronolide B synthase II) (DEBS 2)
          Length = 3566

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 63   ASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREV 212
            A L  A  + PA + G +     ++HVA A  ++AAA++       +RE+
Sbjct: 2087 AELWRAHGVTPAAVVGHSQGEIAAAHVAGALSLEAAAKVVALRSQVLREL 2136

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>VGLD_BHV1S (Q08100) Glycoprotein D precursor (Glycoprotein IV)|
          Length = 417

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
 Frame = -3

Query: 284 ARDEEGRGCEGEAGHLG--------GVGALACDLPDVGLQGARDPGGSVDAERP 147
           AR++EG   +G AG  G        G G       + G +G   PG S DA+RP
Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESPTPEANGGAEGEPKPGPSPDADRP 336

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>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)|
          Length = 637

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = -3

Query: 281 RDEEGRGCEGEAGHLGGVGALACDLP--DVGLQGARDPGGSVDAERPGDVRRRPHGGG 114
           R E  R  EG+A      GA    +P   V  +G+ D GGSVDA    D       GG
Sbjct: 129 RGEAAREAEGQAAAPAAPGAQEEAVPGDSVDAEGSIDAGGSVDAAGSVDAGGSIDAGG 186

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>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 550

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 7/59 (11%)
 Frame = -3

Query: 269 GRGCEGEAGHLGGVGALACDLPDVGLQG-ARDPGGSVDAER------PGDVRRRPHGGG 114
           GR   G  G  G  G  + +    G  G AR PGG   A R      PG   RRP GGG
Sbjct: 488 GRPSGGRPGPGGNRGPASANRGPGGPGGGARGPGGPGGAPRGPGGRPPGGGNRRPPGGG 546

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>OCD1_RHIME (P58338) Ornithine cyclodeaminase 1 (EC 4.3.1.12) (OCD 1)|
          Length = 329

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 22/64 (34%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +3

Query: 126 RPSSHVARAFGVDAAARI---TCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 296
           R  S VA  FG    AR+     +L   IRE      DAAK    A+A    L     AE
Sbjct: 129 REDSSVAAVFGAGMQARLQLEALALVRPIREARIWARDAAKAEAAAIALGGKLGFAVKAE 188

Query: 297 GAPK 308
             P+
Sbjct: 189 TDPR 192

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>34KD_MYCTU (P65637) 34 kDa antigenic protein homolog|
          Length = 303

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 29 FPRTKPTDQHGSVSPSRGHADAG 97
          +P+ +P   +G V+PS  HAD G
Sbjct: 10 YPQAQPAGSYGGVTPSFAHADEG 32

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>34KD_MYCBO (P65638) 34 kDa antigenic protein homolog|
          Length = 303

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 29 FPRTKPTDQHGSVSPSRGHADAG 97
          +P+ +P   +G V+PS  HAD G
Sbjct: 10 YPQAQPAGSYGGVTPSFAHADEG 32

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>NH103_CAEEL (O16359) Nuclear hormone receptor family member nhr-103|
          Length = 394

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = -2

Query: 345 CRSCSGFRRRSASWA 301
           CRSC+ F RRSA+W+
Sbjct: 28  CRSCAAFFRRSATWS 42

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>NIR_BETVE (P38500) Ferredoxin--nitrite reductase, chloroplast precursor (EC|
           1.7.7.1)
          Length = 583

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -3

Query: 284 ARDEEGRGCEGEAGHLGG 231
           ARDE G+ CEG A  LGG
Sbjct: 521 ARDENGKPCEGAAVFLGG 538

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>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein) (PRPL-2 protein)
          Length = 503

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +1

Query: 142 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 237
           SPGRS    PP S  P  P       S P PP
Sbjct: 350 SPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381

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>OPN4_HUMAN (Q9UHM6) Melanopsin (Opsin-4)|
          Length = 478

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 169 PPGSRAPCNPTSGRSQASAPTPPRW 243
           P G R P +PT   S  + P PP W
Sbjct: 4   PSGPRVPPSPTQEPSCMATPAPPSW 28

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>DBPA_HUMAN (P16989) DNA-binding protein A (Cold shock domain-containing|
           protein A) (Single-strand DNA-binding protein NF-GMB)
          Length = 372

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
 Frame = +3

Query: 27  SSRVPSPPTNMAASL-QAAATLMPAKIGG-RASSVRPSSHVARAFGVDAAARITCSLQSD 200
           ++ +P  PT  AA+  Q  A   P   G  +A++  P++HVA   G DAA   T +  + 
Sbjct: 12  TTTLPQAPTEAAAAAPQDPAPKSPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAA 71

Query: 201 IREVASKCADAAKMAGFALATSAL 272
               A+   DA K     LAT  L
Sbjct: 72  SLATAAGSEDAEKK---VLATKVL 92

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>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 493

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = +1

Query: 142 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 237
           SPGRS    PP S  P  P       S P PP
Sbjct: 340 SPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 371

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>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
 Frame = -3

Query: 320  EGQPL--GRPLRTCARDEEGR-GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAER 150
            +GQP   G P     R E G  G  G  GH G  G +     + G +G   P G   A  
Sbjct: 1018 DGQPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKN-GDRGETGPAGPSGAPG 1076

Query: 149  PGDVRRRPHGGGPAADLG 96
            P   R  P   GP  D G
Sbjct: 1077 PAGARGAPGPQGPRGDKG 1094

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>KCNC3_RAT (Q01956) Potassium voltage-gated channel subfamily C member 3|
           (Voltage-gated potassium channel subunit Kv3.3)
           (KSHIIID)
          Length = 889

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 185 ARDPGGSVDAERPGDVRRRPHGGGPAADLGRHQRGRG 75
           A  P G+  +  PG  R  P  G PA  +GRH  G G
Sbjct: 51  AASPAGAPLSCGPGGRRAEPCSGLPAVAMGRHGGGGG 87

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>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor|
          Length = 1496

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 28/66 (42%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = -3

Query: 263  GCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRR--PHGGGPAADLGRH 90
            G  GE G  G  G     LP  G QGA    G V A  PGD  +R  P   GP   LGR 
Sbjct: 1059 GAVGERGDRGDPGPAG--LP--GSQGAPGTPGPVGA--PGDAGQRGDPGSRGPIGHLGRA 1112

Query: 89   QRGRGL 72
             + RGL
Sbjct: 1113 GK-RGL 1117

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>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 273

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +3

Query: 339 TYMEVKGTGTANQCPTI 389
           TY +++GTG AN+CP +
Sbjct: 34  TYEQIRGTGLANKCPQL 50

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>BAG3_MOUSE (Q9JLV1) BAG family molecular chaperone regulator 3 (BCL-2-binding|
           athanogene-3) (BAG-3) (Bcl-2-binding protein Bis)
          Length = 577

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 30  SRVPSPPTNMAASLQAAATLMPAK 101
           S VPSPP N+AA  +AA +  PA+
Sbjct: 386 SAVPSPPKNVAAEQKAAPSPAPAE 409

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>AMOT_MOUSE (Q8VHG2) Angiomotin (Fragment)|
          Length = 926

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 26/83 (31%), Positives = 36/83 (43%)
 Frame = +3

Query: 57  MAASLQAAATLMPAKIGGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAA 236
           +AA   AAAT  PA     A++  P++ V+ A  V AA  I+                AA
Sbjct: 706 VAAPAAAAATPSPANAAALAAAAAPATSVSAATSVSAANSIS---------------PAA 750

Query: 237 KMAGFALATSALLVSGASAEGAP 305
            +A  A+   A  VS A+A   P
Sbjct: 751 PVAPAAVVPPAAPVSPAAAVQIP 773


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,817,522
Number of Sequences: 219361
Number of extensions: 1195938
Number of successful extensions: 5780
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 5114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5745
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result