ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet97d09 |
|---|---|
| Clone Library Name | barley_pub |
>XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hydrolase protein| 25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25) Length = 284 Score = 57.4 bits (137), Expect = 1e-08 Identities = 23/29 (79%), Positives = 27/29 (93%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 FD EFD+TWGDGRGK+LNNG+LLTL LD+ Sbjct: 30 FDTEFDITWGDGRGKVLNNGELLTLSLDR 58
>XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hydrolase protein| 21 precursor (EC 2.4.1.207) (At-XTH21) (XTH-21) Length = 305 Score = 50.1 bits (118), Expect = 2e-06 Identities = 20/29 (68%), Positives = 25/29 (86%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 F+++ D+TWGDGRG ILNNG LL LGLD+ Sbjct: 28 FNQDIDITWGDGRGNILNNGTLLNLGLDQ 56
>XTH24_ARATH (P24806) Xyloglucan endotransglucosylase/hydrolase protein 24| precursor (EC 2.4.1.207) (At-XTH24) (XTH-24) (Meristem protein 5) (MERI-5 protein) (MERI5 protein) (Endo-xyloglucan transferase) (Xyloglucan endo-1,4-beta-D-glucanase) Length = 269 Score = 48.9 bits (115), Expect = 4e-06 Identities = 21/29 (72%), Positives = 25/29 (86%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 F+ + +V WG+GRGKILNNGQLLTL LDK Sbjct: 24 FNTDVNVAWGNGRGKILNNGQLLTLSLDK 52
>XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase protein 22| precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch protein 4) Length = 284 Score = 48.5 bits (114), Expect = 5e-06 Identities = 19/29 (65%), Positives = 25/29 (86%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 F ++ ++TWGDGRG+I NNG+LLTL LDK Sbjct: 23 FQRDVEITWGDGRGQIKNNGELLTLSLDK 51
>XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hydrolase protein| 23 precursor (EC 2.4.1.207) (At-XTH23) (XTH-23) Length = 286 Score = 48.1 bits (113), Expect = 6e-06 Identities = 19/29 (65%), Positives = 24/29 (82%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 F ++ ++TWGDGRG+I NNG LLTL LDK Sbjct: 26 FQRDVEITWGDGRGQITNNGDLLTLSLDK 54
>XTH15_ARATH (Q38911) Probable xyloglucan endotransglucosylase/hydrolase protein| 15 precursor (EC 2.4.1.207) (At-XTH15) (XTH-15) Length = 289 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/29 (62%), Positives = 22/29 (75%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 F EFD+TWGD RGKI N G +L+L LD+ Sbjct: 28 FFDEFDLTWGDHRGKIFNGGNMLSLSLDQ 56
>XTH16_ARATH (Q8LG58) Probable xyloglucan endotransglucosylase/hydrolase protein| 16 precursor (EC 2.4.1.207) (At-XTH16) (XTH-16) Length = 291 Score = 42.7 bits (99), Expect = 3e-04 Identities = 16/29 (55%), Positives = 25/29 (86%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 F++EFD+TWG+ RGKI + G++L+L LD+ Sbjct: 27 FNEEFDLTWGEHRGKIFSGGKMLSLSLDR 55
>XTH14_ARATH (Q9ZSU4) Xyloglucan endotransglucosylase/hydrolase protein 14| precursor (EC 2.4.1.207) (At-XTH14) (XTH-14) Length = 287 Score = 42.7 bits (99), Expect = 3e-04 Identities = 18/29 (62%), Positives = 21/29 (72%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 F + FD+TWG+GR I NGQLLT LDK Sbjct: 30 FYESFDITWGNGRANIFENGQLLTCTLDK 58
>BRU1_SOYBN (P35694) Brassinosteroid-regulated protein BRU1 precursor| Length = 283 Score = 42.4 bits (98), Expect = 3e-04 Identities = 18/29 (62%), Positives = 22/29 (75%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 F ++FD+TWG R KI N GQLL+L LDK Sbjct: 32 FYQDFDLTWGGDRAKIFNGGQLLSLSLDK 60
>XTH20_ARATH (Q9FI31) Probable xyloglucan endotransglucosylase/hydrolase protein| 20 precursor (EC 2.4.1.207) (At-XTH20) (XTH-20) Length = 282 Score = 40.8 bits (94), Expect = 0.001 Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 1/30 (3%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNN-GQLLTLGLDK 220 F K+ + WGDGRGKIL+N G LL+L LDK Sbjct: 29 FHKDVQIHWGDGRGKILDNVGNLLSLSLDK 58
>XTH13_ARATH (Q9FKL8) Putative xyloglucan endotransglucosylase/hydrolase protein| 13 precursor (EC 2.4.1.207) (At-XTH13) (XTH-13) Length = 284 Score = 40.4 bits (93), Expect = 0.001 Identities = 17/29 (58%), Positives = 21/29 (72%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 F FD+TWG+GR I+ +GQLLT LDK Sbjct: 26 FYDNFDITWGNGRANIVESGQLLTCTLDK 54
>XTH12_ARATH (Q9FKL9) Probable xyloglucan endotransglucosylase/hydrolase protein| 12 precursor (EC 2.4.1.207) (At-XTH12) (XTH-12) Length = 285 Score = 38.9 bits (89), Expect = 0.004 Identities = 17/29 (58%), Positives = 19/29 (65%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNNGQLLTLGLDK 220 F FD+TWG GR I +GQLLT LDK Sbjct: 27 FYDSFDITWGAGRANIFESGQLLTCTLDK 55
>XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hydrolase protein| 19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19) Length = 277 Score = 38.1 bits (87), Expect = 0.006 Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILNN-GQLLTLGLDK 220 F K+ + WGDGRGKI +N G+LL+L LDK Sbjct: 24 FHKDVKIHWGDGRGKIHDNQGKLLSLSLDK 53
>XTH18_ARATH (Q9M0D2) Probable xyloglucan endotransglucosylase/hydrolase protein| 18 precursor (EC 2.4.1.207) (At-XTH18) (XTH-18) Length = 282 Score = 36.6 bits (83), Expect = 0.018 Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILN-NGQLLTLGLDK 220 F K+ + WGDGRGK+ + +G+LL+L LDK Sbjct: 29 FHKDVQIHWGDGRGKVRDRDGKLLSLSLDK 58
>XTH17_ARATH (O80803) Probable xyloglucan endotransglucosylase/hydrolase protein| 17 precursor (EC 2.4.1.207) (At-XTH17) (XTH-17) Length = 282 Score = 36.6 bits (83), Expect = 0.018 Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%) Frame = +2 Query: 134 FDKEFDVTWGDGRGKILN-NGQLLTLGLDK 220 F K+ + WGDGRGKI + +G+LL+L LDK Sbjct: 29 FHKDVQIHWGDGRGKIHDRDGKLLSLSLDK 58
>ITIH4_HUMAN (Q14624) Inter-alpha-trypsin inhibitor heavy chain H4 precursor| (ITI heavy chain H4) (Inter-alpha-inhibitor heavy chain 4) (Inter-alpha-trypsin inhibitor family heavy chain-related protein) (IHRP) (Plasma kallikrein sensitive glycoprotein 120 Length = 930 Score = 31.2 bits (69), Expect = 0.76 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = -3 Query: 186 LRILPRPSPQVTSN---SLSKLAAARAQEASRIESTDAPMRAMRCVLPKVG 43 L ILP +P TSN ++S++ + +E + T AP++A +LP G Sbjct: 690 LAILPASAPPATSNPDPAVSRVMNMKIEETTMTTQTPAPIQAPSAILPLPG 740
>EVC_MOUSE (P57680) Ellis-van Creveld syndrome protein homolog| Length = 1005 Score = 30.0 bits (66), Expect = 1.7 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%) Frame = -3 Query: 165 SPQVTSNSLSKLAAARAQEASRIESTDAPMRAMRCVLPKVGS----LGLRMLDGNLCLC 1 SP + SLS+ +S + ST + R ++C +VGS L +D +LC+C Sbjct: 156 SPASSLGSLSQAGKEDGSSSSSMRSTYSDDRILQCAFLRVGSFPEILACESVDIDLCVC 214
>PROB_SILPO (Q5LRY5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 368 Score = 29.6 bits (65), Expect = 2.2 Identities = 15/32 (46%), Positives = 17/32 (53%) Frame = +1 Query: 79 GGVGAFDPARLLRPGGGELRQGVRRYLG*RAR 174 G G DP +L P G L QG+ RY G AR Sbjct: 307 GDFGRGDPVAILGPDGRRLGQGLCRYTGDEAR 338
>CRTI_SYNY4 (P21134) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene| desaturase) Length = 532 Score = 29.3 bits (64), Expect = 2.9 Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Frame = -2 Query: 196 LAVVEDLAAPV-TP--GNVELLVEA-RRRQGARGEQDRKHRRPHASHALRAPKSRLTRSE 29 LAVV D A V TP G + +V+ RRR R Q R H HA RA + L E Sbjct: 41 LAVVRDRQAAVQTPRVGQHQAVVQRNRRRHVRRARQGVADGRQHLGHARRAERDDLCVQE 100 Query: 28 NAG 20 G Sbjct: 101 GGG 103
>CYTSA_XENTR (Q2KN96) Cytospin-A| Length = 1101 Score = 28.9 bits (63), Expect = 3.8 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = -3 Query: 219 LSSPSVRSWPLLRILPRPSPQVTSNSLSKLAAARAQEASRI-ESTDAPMRAM 67 +S P S P L ++ PSPQ++ +S S A+ SRI E P+ A+ Sbjct: 938 ISVPDGSSAPSLMVMTSPSPQLSLSSSSPTASVTPTARSRIREERKDPLAAL 989
>Y2470_CORGL (Q8NMU4) UPF0272 protein Cgl2470/cg2715| Length = 394 Score = 28.9 bits (63), Expect = 3.8 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 3/47 (6%) Frame = -2 Query: 199 ELAVVEDLAAPVTPGNVELLVEARRRQGARG---EQDRKHRRPHASH 68 EL ++ + V PG+V L E RQG RG D +H H H Sbjct: 26 ELEKIQQVVEAVIPGDVLLRTEEVVRQGQRGIKLHVDAQHEHHHHRH 72
>SYE_PYRKO (Q5JH16) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 573 Score = 28.5 bits (62), Expect = 4.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 213 SPSVRSWPLLRILPRPSPQVTSN 145 +P+VR WP LRI+ P+ T N Sbjct: 253 NPAVRDWPALRIIDNPNHPRTGN 275
>TREF1_MOUSE (Q8BXJ2) Transcriptional-regulating factor 1| (Transcriptional-regulating protein 132) (Zinc finger transcription factor TReP-132) Length = 1205 Score = 28.5 bits (62), Expect = 4.9 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = -3 Query: 198 SWPLLRILPRPSPQVTSNSLSKLAAARAQEASRIESTDAPM 76 S P+ I P+PS Q +NS++ AAR + AS + + P+ Sbjct: 593 SVPVKLIPPKPSSQGFTNSVAATPAARDKPASSMSDDEMPV 633
>SYE_PYRHO (O59314) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 570 Score = 28.5 bits (62), Expect = 4.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 213 SPSVRSWPLLRILPRPSPQVTSN 145 +P+VR WP LRI+ P+ T N Sbjct: 251 NPAVRDWPALRIIDNPNHPRTGN 273
>SYE_PYRFU (Q8U064) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 572 Score = 28.1 bits (61), Expect = 6.4 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 213 SPSVRSWPLLRILPRPSPQVTSN 145 +P+VR WP LRI+ P+ T N Sbjct: 253 NPAVRDWPALRIVDEPNHPRTGN 275
>XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte surface| antigen) (721P) (Protein XE7) Length = 695 Score = 28.1 bits (61), Expect = 6.4 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Frame = -2 Query: 133 ARRRQGARGEQDRKHRRPHASHALR--APKSRLTRSEN 26 ARR + RK RRPH HA + +P+ R T ++ Sbjct: 606 ARRASSREDGRPRKERRPHKKHAYKDDSPRRRSTSPDH 643
>ATG26_CRYNE (Q5KK25) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)| (Autophagy-related protein 26) Length = 1585 Score = 27.7 bits (60), Expect = 8.4 Identities = 18/73 (24%), Positives = 36/73 (49%) Frame = -2 Query: 220 LVQSQRQELAVVEDLAAPVTPGNVELLVEARRRQGARGEQDRKHRRPHASHALRAPKSRL 41 L ++ QE+ + ++ P + + +L V+A R+G +D + + A + RL Sbjct: 324 LRSAEEQEMRLGKEFVPPKSRDSADLNVDAALREGGSEREDVIEEQMQTNEA----EKRL 379 Query: 40 TRSENAGWKLVFV 2 TR+E +L+ V Sbjct: 380 TRNEKLAERLMEV 392
>K0056_HUMAN (P42695) Protein KIAA0056| Length = 1498 Score = 27.7 bits (60), Expect = 8.4 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 5/45 (11%) Frame = -3 Query: 219 LSSPSVRSWPLLRILPRPSPQVTS-----NSLSKLAAARAQEASR 100 +SSP+ + PL R+LP+ P S NS+ K ++++ SR Sbjct: 1327 VSSPTPETGPLQRLLPKARPMSLSTIAILNSVKKAVESKSRHRSR 1371 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,589,089 Number of Sequences: 219361 Number of extensions: 569602 Number of successful extensions: 2557 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2478 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2554 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
