ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 212 4e-55
2CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 189 2e-48
3CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 188 4e-48
4CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 186 2e-47
5CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 186 3e-47
6CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 185 4e-47
7CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 184 6e-47
8CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 183 2e-46
9CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 182 4e-46
10CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 181 5e-46
11CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 181 5e-46
12CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 180 1e-45
13CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 180 1e-45
14CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 179 2e-45
15CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 179 3e-45
16CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 178 4e-45
17CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 174 6e-44
18CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 174 8e-44
19CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 174 1e-43
20CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 173 2e-43
21CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 173 2e-43
22CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 173 2e-43
23CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 172 3e-43
24CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 172 3e-43
25CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 172 3e-43
26CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 171 7e-43
27CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 171 7e-43
28CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 170 1e-42
29CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 170 2e-42
30CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 169 2e-42
31CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 166 2e-41
32CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 166 2e-41
33CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 164 1e-40
34CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 163 2e-40
35CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 163 2e-40
36CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 151 6e-37
37CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 149 2e-36
38CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 145 3e-35
39CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 145 3e-35
40CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 145 5e-35
41CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 144 9e-35
42CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast... 144 1e-34
43CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 144 1e-34
44CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 142 3e-34
45CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla... 142 4e-34
46CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 141 8e-34
47CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 140 1e-33
48CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 139 3e-33
49CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 138 6e-33
50CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 134 9e-32
51CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 133 2e-31
52CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 123 2e-28
53CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop... 122 3e-28
54CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 120 1e-27
55CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 119 4e-27
56CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type... 107 1e-23
57CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type... 89 5e-18
58CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 81 1e-15
59CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 72 4e-13
60LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre... 67 2e-11
61CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast... 66 4e-11
62CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 65 9e-11
63LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 58 9e-09
64CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch... 54 1e-07
65CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop... 54 2e-07
66CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla... 52 5e-07
67CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch... 52 8e-07
68CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl... 50 3e-06
69CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 49 4e-06
70CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl... 49 7e-06
71CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo... 37 0.016
72FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ... 37 0.016
73CLCL_RALSO (Q8XTT4) Putative chloride channel protein clcB-like 36 0.045
74CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo... 35 0.059
75CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo... 35 0.077
76CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl... 35 0.077
77LDLR_RAT (P35952) Low-density lipoprotein receptor precursor (LD... 34 0.17
78GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 33 0.29
79CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29 33 0.38
80CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl... 33 0.38
81GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--... 32 0.65
82GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 32 0.65
83GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--... 32 0.85
84GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 32 0.85
85GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 32 0.85
86GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 31 1.1
87GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 31 1.5
88GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 31 1.5
89GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 31 1.5
90LIPB_GEOSL (Q74AE2) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl... 30 1.9
91UN104_CAEEL (P23678) Kinesin-like protein unc-104 (Uncoordinated... 30 2.5
92HYPA_HYPLI (P35587) Hypodermin A precursor (EC 3.4.21.-) (HA) 30 2.5
93KLRBA_MOUSE (P27811) Natural killer cell surface protein P1-2 (N... 30 2.5
94GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 30 3.2
95GLNA1_DROME (P20477) Glutamine synthetase 1, mitochondrial precu... 30 3.2
96ANKS3_RAT (Q5M9H0) Ankyrin repeat and SAM domain-containing prot... 29 4.2
97YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.... 29 4.2
98ATKB_PSEAE (P57698) Potassium-transporting ATPase B chain (EC 3.... 29 4.2
99U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliar... 29 4.2
100CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14) 29 5.5
101RL13A_CYAPA (P93099) 60S ribosomal protein L13a 29 5.5
102AROA_THEMA (Q9WYI0) 3-phosphoshikimate 1-carboxyvinyltransferase... 28 7.2
103DL_DROME (P10041) Neurogenic locus protein delta precursor 28 7.2
104S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (G... 28 9.4
105IF2_NEIG1 (Q5F797) Translation initiation factor IF-2 28 9.4
106GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate... 28 9.4
107GR22C_DROME (P58952) Putative gustatory receptor 22c 28 9.4
108TAF1_DROME (P51123) Transcription initiation factor TFIID subuni... 28 9.4
109GUN1_RALSO (P58599) Endoglucanase precursor (EC 3.2.1.4) (Endo-1... 28 9.4 
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  212 bits (539), Expect = 4e-55
 Identities = 100/107 (93%), Positives = 103/107 (96%)
 Frame = +2

Query: 101 FAGKALKNLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTG 280
           FAGKA+KNLPS ALIG+ARV MRKTAAKAKQVSS SPWYGSDRVLYLGPLSGEPPSYLTG
Sbjct: 13  FAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTG 72

Query: 281 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
to top
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  189 bits (480), Expect = 2e-48
 Identities = 94/108 (87%), Positives = 99/108 (91%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALIGEARVTMRKTAAKAKQVS-SGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+ N+PS +  GEARVTMRKTAAKAK  + SGSPWYG DRVLYLGPLSGEPPSYLT
Sbjct: 13  FAGKAV-NVPSSSF-GEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLT 70

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118
to top
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  188 bits (478), Expect = 4e-48
 Identities = 95/108 (87%), Positives = 99/108 (91%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALIGEARVTMRKTAAKAKQV-SSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+ N+PS +L GEARVTMRKTAAKAK   SSGSPWYG DRVLYLGPLSGEPPSYLT
Sbjct: 13  FAGKAV-NVPS-SLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLT 70

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118
to top
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  186 bits (472), Expect = 2e-47
 Identities = 90/108 (83%), Positives = 95/108 (87%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+K  PS + I G  +VTMRKTA+KAK VSSGSPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
to top
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  186 bits (471), Expect = 3e-47
 Identities = 89/108 (82%), Positives = 95/108 (87%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+K  PS + + G  +VTMRKTA+KAK VSSGSPWYG DRV YLGP SGE PSYLT
Sbjct: 12  FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLT 71

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 72  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119
to top
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  185 bits (470), Expect = 4e-47
 Identities = 90/108 (83%), Positives = 93/108 (86%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+K  PS + I G  RVTMRKTA KAK  SSGSPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
to top
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  184 bits (468), Expect = 6e-47
 Identities = 89/108 (82%), Positives = 94/108 (87%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+K  PS + + G  +VTMRKTA KAK VSSGSPWYG DRV YLGP SGE PSYLT
Sbjct: 12  FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLT 71

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 72  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 119



 Score = 29.3 bits (64), Expect = 4.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 248 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           ++GEP   +         +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 177 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 227
to top
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  183 bits (464), Expect = 2e-46
 Identities = 88/108 (81%), Positives = 93/108 (86%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+K  PS + I G  +VTMRKT  KAK +SSGSPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
to top
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  182 bits (461), Expect = 4e-46
 Identities = 88/108 (81%), Positives = 94/108 (87%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+K  PS + I G  +VTMRKTA+KAK VSS SPWYG +RV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLT 72

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120



 Score = 29.3 bits (64), Expect = 4.2
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 248 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           ++GEP   +         +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228
to top
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  181 bits (460), Expect = 5e-46
 Identities = 87/98 (88%), Positives = 90/98 (91%), Gaps = 1/98 (1%)
 Frame = +2

Query: 131 SPALIGEARVTMRKTAAKAKQV-SSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 307
           S AL GEAR+TMRKTAAK K   SSGSPWYG+DRVLYLGPLSGEPPSYLTGEFPGDYGWD
Sbjct: 21  SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 80

Query: 308 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 81  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 118
to top
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  181 bits (460), Expect = 5e-46
 Identities = 87/106 (82%), Positives = 91/106 (85%), Gaps = 1/106 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGK +K  PS + I G  + TMRKTA KAK VSSGSPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPD 415
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 118
to top
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  180 bits (457), Expect = 1e-45
 Identities = 86/107 (80%), Positives = 92/107 (85%), Gaps = 1/107 (0%)
 Frame = +2

Query: 104 AGKALKNLPSPA-LIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTG 280
           AGKA+K  P+ + +IGE R+TMRKTA K K V S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 14  AGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTG 73

Query: 281 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
to top
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  180 bits (456), Expect = 1e-45
 Identities = 84/105 (80%), Positives = 88/105 (83%)
 Frame = +2

Query: 101 FAGKALKNLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTG 280
           FAGKA+    S  + G  + TMRKT  KAK VSSGSPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 281 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPD 415
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
to top
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  179 bits (455), Expect = 2e-45
 Identities = 87/108 (80%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+K  PS + I G  + TMRKT  KAK VSSGSPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 73  GEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
to top
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  179 bits (454), Expect = 3e-45
 Identities = 83/103 (80%), Positives = 90/103 (87%)
 Frame = +2

Query: 113 ALKNLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPG 292
           AL    +  + GE R+TMRK+AAK K  +SGSPWYG+DRVLYLGPLSGEPPSYLTGEFPG
Sbjct: 12  ALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPG 71

Query: 293 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 72  DYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 114
to top
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  178 bits (452), Expect = 4e-45
 Identities = 86/108 (79%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAG A+K  PS + I G  +  MRKT  KAK VSSGSPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
to top
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  174 bits (442), Expect = 6e-44
 Identities = 83/106 (78%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
 Frame = +2

Query: 101 FAGKALK-NLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+K +  S  + G  +VTMRKT  KAK  SS SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPD 415
           GEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+
Sbjct: 73  GEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 118
to top
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  174 bits (441), Expect = 8e-44
 Identities = 85/108 (78%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPS-PALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAG+A+K  PS P + G  RV+MRKT AK   V+S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGPFSGESPSYLT 70

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118
to top
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  174 bits (440), Expect = 1e-43
 Identities = 85/107 (79%), Positives = 93/107 (86%), Gaps = 1/107 (0%)
 Frame = +2

Query: 104 AGKALKNLPS-PALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTG 280
           AG+A+K  P+ P + G A+ TMRKTA+K+  VSSGSPWYG DRV YLGP SGEPPSYLTG
Sbjct: 4   AGQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTG 61

Query: 281 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 62  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 108
to top
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  173 bits (438), Expect = 2e-43
 Identities = 81/105 (77%), Positives = 86/105 (81%)
 Frame = +2

Query: 101 FAGKALKNLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTG 280
           FAGKA+    S  +    +VTMRKT  KAK VSSGSPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 281 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPD 415
           EFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFP+
Sbjct: 73  EFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPE 117
to top
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  173 bits (438), Expect = 2e-43
 Identities = 83/106 (78%), Positives = 87/106 (82%)
 Frame = +2

Query: 104 AGKALKNLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGE 283
           AGK LK  PS   +G AR TMRK+A   K  SSGSPWYG DRV YLGP SGE PSYLTGE
Sbjct: 17  AGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGE 76

Query: 284 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           FPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 77  FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 122
to top
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  173 bits (438), Expect = 2e-43
 Identities = 85/108 (78%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPA-LIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+K  P+ + ++G  RVTMRKT AK K   SGSPWYGSDRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLT 71

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFP+ L
Sbjct: 72  GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119
to top
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  172 bits (436), Expect = 3e-43
 Identities = 86/108 (79%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+KNL S + + G+ARV+MRKTAA  K    GSPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYLGPFSGESPSYLT 69

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 70  GEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELL 117
to top
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  172 bits (436), Expect = 3e-43
 Identities = 86/106 (81%), Positives = 90/106 (84%)
 Frame = +2

Query: 104 AGKALKNLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGE 283
           AGKA+K  PS   +G  RV+MRKT  K  QVSSGSPWYG DRV YLGP SGEPPSYLTGE
Sbjct: 15  AGKAVKLGPSAPEVG--RVSMRKTVTK--QVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 70

Query: 284 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 71  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 116
to top
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  172 bits (436), Expect = 3e-43
 Identities = 84/108 (77%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPA-LIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+K  P  + + G  RVTMRKT        SGSPWYGSDRV YLGP SGEPPSYLT
Sbjct: 13  FAGKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPPSYLT 70

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELL 118
to top
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  171 bits (433), Expect = 7e-43
 Identities = 84/108 (77%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPA-LIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAGKA+   P+ + ++G  RVTMRKT AK K   SGSPWYGSDRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLT 71

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFP+ L
Sbjct: 72  GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 119
to top
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  171 bits (433), Expect = 7e-43
 Identities = 78/92 (84%), Positives = 81/92 (88%)
 Frame = +2

Query: 146 GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 325
           GE R+TMRKT  K K  +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSA
Sbjct: 24  GEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 83

Query: 326 DPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           DPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 84  DPETFAKNRELEVIHSRWAMLGALGCVFPELL 115
to top
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  170 bits (431), Expect = 1e-42
 Identities = 77/94 (81%), Positives = 82/94 (87%)
 Frame = +2

Query: 140 LIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGL 319
           + GE R+TMRKTAAK K   SGSPWYG+DRVLYLGPLSG PPSYLTGEFPGDYGWDT GL
Sbjct: 24  VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83

Query: 320 SADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           SADPETFAKNRELEVIHCRWA+   LGCVFP+ L
Sbjct: 84  SADPETFAKNRELEVIHCRWAIAVGLGCVFPELL 117
to top
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  170 bits (430), Expect = 2e-42
 Identities = 84/108 (77%), Positives = 89/108 (82%), Gaps = 1/108 (0%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLT 277
           FAG+A+K  PS + I G  R+TMRK  A AK   S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLT 70

Query: 278 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 118
to top
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  169 bits (429), Expect = 2e-42
 Identities = 81/98 (82%), Positives = 85/98 (86%)
 Frame = +2

Query: 128 PSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 307
           PS   +G  RV+MRKTA+K   VSSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWD
Sbjct: 3   PSTPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 60

Query: 308 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 61  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 98
to top
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  166 bits (421), Expect = 2e-41
 Identities = 79/93 (84%), Positives = 80/93 (86%), Gaps = 1/93 (1%)
 Frame = +2

Query: 146 GEARVTMRKTAAKAKQVS-SGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 322
           GEARVTMRK   K    S S SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLS
Sbjct: 35  GEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 94

Query: 323 ADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           ADPE FAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 95  ADPENFAKNRELEVIHCRWAMLGALGCVFPELL 127
to top
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  166 bits (420), Expect = 2e-41
 Identities = 78/98 (79%), Positives = 82/98 (83%)
 Frame = +2

Query: 128 PSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 307
           PS   +G AR TMRK+A   K  SSGSPWYG DRV YLGP SGE PSYLTGEFPGDYGWD
Sbjct: 24  PSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 83

Query: 308 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           TAGLSADPETF+KNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 84  TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 121
to top
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  164 bits (414), Expect = 1e-40
 Identities = 78/93 (83%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
 Frame = +2

Query: 146 GEARVTMRK-TAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 322
           GEAR+TMRK T  K+   S  SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLS
Sbjct: 39  GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98

Query: 323 ADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           ADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 99  ADPETFAKNRELEVIHSRWAMLGALGCVFPELL 131
to top
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  163 bits (412), Expect = 2e-40
 Identities = 77/93 (82%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
 Frame = +2

Query: 146 GEARVTMRK-TAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 322
           GEAR+TMRK T  K+   S  SPWYG DRV+YLGP SGEPPSYLTGEFPGDYGWDTAGLS
Sbjct: 39  GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98

Query: 323 ADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           ADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 99  ADPETFAKNRELEVIHSRWAMLGALGCVFPELL 131
to top
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  163 bits (412), Expect = 2e-40
 Identities = 82/107 (76%), Positives = 86/107 (80%), Gaps = 1/107 (0%)
 Frame = +2

Query: 104 AGKALKNLPSPA-LIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTG 280
           AGKA+K  PS + L G  RV+MRKT    K   S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 14  AGKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEAPSYLTG 70

Query: 281 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 117
to top
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  151 bits (382), Expect = 6e-37
 Identities = 78/110 (70%), Positives = 83/110 (75%), Gaps = 3/110 (2%)
 Frame = +2

Query: 101 FAGKALK---NLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSY 271
           F+G+ LK    L      GEARV M    +KA    SGS WYGSDR LYLGP SG PPSY
Sbjct: 12  FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSY 68

Query: 272 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           L+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV P+ L
Sbjct: 69  LSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 118
to top
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  149 bits (377), Expect = 2e-36
 Identities = 70/92 (76%), Positives = 75/92 (81%)
 Frame = +2

Query: 146 GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 325
           GE R+TMR+T   A Q    S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSA
Sbjct: 31  GEGRITMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSA 86

Query: 326 DPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           DPETFA+NRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 87  DPETFARNRELEVIHCRWAMLGALGCVFPEIL 118
to top
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  145 bits (367), Expect = 3e-35
 Identities = 69/89 (77%), Positives = 73/89 (82%)
 Frame = +2

Query: 155 RVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 334
           RVTMR+T   A Q    S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 6   RVTMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 61

Query: 335 TFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           TFA+NRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 62  TFARNRELEVIHCRWAMLGALGCVFPEIL 90
to top
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  145 bits (367), Expect = 3e-35
 Identities = 69/92 (75%), Positives = 73/92 (79%)
 Frame = +2

Query: 146 GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 325
           G  R TMR+T   A Q    S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSA
Sbjct: 31  GGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSA 86

Query: 326 DPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           DPETFA+NRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 87  DPETFARNRELEVIHCRWAMLGALGCVFPEIL 118
to top
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  145 bits (365), Expect = 5e-35
 Identities = 69/93 (74%), Positives = 74/93 (79%)
 Frame = +2

Query: 143 IGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 322
           +G  RV+MR+T   A      S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLS
Sbjct: 30  VGGGRVSMRRTVKSAPT----SIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLS 85

Query: 323 ADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           ADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 86  ADPETFAKNRELEVIHCRWAMLGALGCVFPEIL 118
to top
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  144 bits (363), Expect = 9e-35
 Identities = 68/89 (76%), Positives = 72/89 (80%)
 Frame = +2

Query: 155 RVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 334
           R TMR+T   A Q    S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 34  RATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 89

Query: 335 TFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           TFA+NRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 90  TFARNRELEVIHCRWAMLGALGCVFPEIL 118
to top
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  144 bits (362), Expect = 1e-34
 Identities = 74/112 (66%), Positives = 82/112 (73%), Gaps = 5/112 (4%)
 Frame = +2

Query: 101 FAGKALKNLPSPALIGEA-----RVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPP 265
           FAG+ L   P   L+ +      RV+MR+T   A +    S WYG DR  YLGP S + P
Sbjct: 11  FAGQTLLK-PQNELVRKVGGNGGRVSMRRTIKSAPE----SIWYGPDRPKYLGPFSEQTP 65

Query: 266 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 66  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117
to top
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  144 bits (362), Expect = 1e-34
 Identities = 66/78 (84%), Positives = 68/78 (87%)
 Frame = +2

Query: 188 KQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 367
           K  SS SPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI
Sbjct: 4   KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63

Query: 368 HCRWAMLGALGCVFPDCL 421
           H RWAMLGALGCVFP+ L
Sbjct: 64  HSRWAMLGALGCVFPELL 81
to top
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  142 bits (358), Expect = 3e-34
 Identities = 67/91 (73%), Positives = 73/91 (80%)
 Frame = +2

Query: 149 EARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 328
           +AR+TMR+T   A +    S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA +SAD
Sbjct: 33  QARITMRRTVRSAPE----SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88

Query: 329 PETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           PETFAKNRELEVIHCRWAMLGALGCVFP+ L
Sbjct: 89  PETFAKNRELEVIHCRWAMLGALGCVFPELL 119
to top
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  142 bits (357), Expect = 4e-34
 Identities = 75/106 (70%), Positives = 80/106 (75%)
 Frame = +2

Query: 104 AGKALKNLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGE 283
           AG+A+K  PS   +G  RV+MRKTA K   VSSGSPWYG DRV YLGP SGE PSYLTGE
Sbjct: 14  AGQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 71

Query: 284 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           F G        LSADPETFAKNRELEVIH RWAMLGALGCVFP+ L
Sbjct: 72  FHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 109
to top
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  141 bits (355), Expect = 8e-34
 Identities = 67/89 (75%), Positives = 72/89 (80%)
 Frame = +2

Query: 155 RVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 334
           R+TMR+T   A Q    S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPE
Sbjct: 32  RITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87

Query: 335 TFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           TFA+NRELEVIH RWAMLGALGCVFP+ L
Sbjct: 88  TFARNRELEVIHSRWAMLGALGCVFPEIL 116



 Score = 28.1 bits (61), Expect = 9.4
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 284 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFG 224
to top
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  140 bits (354), Expect = 1e-33
 Identities = 67/92 (72%), Positives = 73/92 (79%)
 Frame = +2

Query: 146 GEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 325
           G+AR TMR+T   A +    S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSA
Sbjct: 31  GQARFTMRRTVKSAPE----SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSA 86

Query: 326 DPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           DPETFA+NRELEVIH RWAMLGALGC FP+ L
Sbjct: 87  DPETFARNRELEVIHSRWAMLGALGCTFPELL 118
to top
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  139 bits (350), Expect = 3e-33
 Identities = 65/91 (71%), Positives = 75/91 (82%)
 Frame = +2

Query: 149 EARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 328
           EARVTMR+T +K+    S + WYG+DR  +LGP SGE PSYL GEF GDYGWDTAGLS+D
Sbjct: 33  EARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSD 90

Query: 329 PETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           PETFA+NRELEVIH RWAMLGALGC+ P+ L
Sbjct: 91  PETFARNRELEVIHARWAMLGALGCLTPELL 121



 Score = 28.9 bits (63), Expect = 5.5
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 284 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 229
to top
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  138 bits (347), Expect = 6e-33
 Identities = 64/93 (68%), Positives = 73/93 (78%)
 Frame = +2

Query: 143 IGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 322
           + + R +MR+T     Q    S WYG+DR  +LGP S + PSYLTGEFPGDYGWDTAGLS
Sbjct: 29  VSDGRFSMRRTVKAVPQ----SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLS 84

Query: 323 ADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           ADPETFAKNRELEVIH RWAMLGALGC+FP+ L
Sbjct: 85  ADPETFAKNRELEVIHSRWAMLGALGCIFPELL 117
to top
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  134 bits (337), Expect = 9e-32
 Identities = 64/96 (66%), Positives = 68/96 (70%)
 Frame = +2

Query: 143 IGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 322
           +G AR TM           S   WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLS
Sbjct: 35  MGSARFTM-----------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLS 83

Query: 323 ADPETFAKNRELEVIHCRWAMLGALGCVFPDCLPAW 430
           ADPE FAKNR LEVIH RWAMLGALGC+FP+ L  W
Sbjct: 84  ADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKW 119



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 284 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226
to top
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  133 bits (335), Expect = 2e-31
 Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
 Frame = +2

Query: 131 SPALIGEARVTMRK-----TAAKAKQVSSGSP-WYGSDRVLYLGPLSGEPPSYLTGEFPG 292
           +P L G+ R           AA   +++ G+  WYG DRV YLGP S + PSYL GEFPG
Sbjct: 17  TPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPG 76

Query: 293 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCLPAW 430
           DYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFP+ L  W
Sbjct: 77  DYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKW 122



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 284 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G
Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 229
to top
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  123 bits (308), Expect = 2e-28
 Identities = 62/108 (57%), Positives = 72/108 (66%), Gaps = 10/108 (9%)
 Frame = +2

Query: 137 ALIGEARVTMRKTAAK----------AKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEF 286
           ALI    +T++  AAK          A   S+G  WYG DR  +LGP S   P+YLTGEF
Sbjct: 4   ALISNRALTVKVEAAKKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEF 63

Query: 287 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCLPAW 430
           PGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG + P+ L  +
Sbjct: 64  PGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTY 111



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 284 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFG 217
to top
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  122 bits (307), Expect = 3e-28
 Identities = 67/97 (69%), Positives = 70/97 (72%)
 Frame = +2

Query: 131 SPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 310
           S  LI  A  TM K AAK+K  SS        RV YLGP SGE PSYLTGEFPGDYGWDT
Sbjct: 30  SSTLIVTAGFTMLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDT 85

Query: 311 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           AGLSA PETFAKNRELEVIH R AM  ALGC+FP+ L
Sbjct: 86  AGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELL 122
to top
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  120 bits (301), Expect = 1e-27
 Identities = 54/59 (91%), Positives = 55/59 (93%)
 Frame = +2

Query: 245 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH  WAMLGALGCVFP+ L
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELL 59
to top
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  119 bits (297), Expect = 4e-27
 Identities = 62/97 (63%), Positives = 71/97 (73%), Gaps = 2/97 (2%)
 Frame = +2

Query: 137 ALIGEARVTMRKTAAKAKQV-SSGSPWYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDT 310
           AL    + T +KTAAKA    SSG  +YG +R  +LGP S    P+YLTGEFPGDYGWDT
Sbjct: 10  ALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69

Query: 311 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           AGLSADPETF + RELE+IH RWAMLGALGC  P+ L
Sbjct: 70  AGLSADPETFKRYRELELIHARWAMLGALGCQTPELL 106
to top
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  107 bits (267), Expect = 1e-23
 Identities = 48/71 (67%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
 Frame = +2

Query: 212 WYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 388
           +YG DR  +LGP S  + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L
Sbjct: 33  FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92

Query: 389 GALGCVFPDCL 421
           GALG + P+ L
Sbjct: 93  GALGILTPELL 103



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 284 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   LG
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLG 214
to top
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 47/87 (54%), Positives = 56/87 (64%)
 Frame = +2

Query: 161 TMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF 340
           T +   A +K  SS + +YG D       L  + P   TGEFPGDYGWDTAGLSADPETF
Sbjct: 40  TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98

Query: 341 AKNRELEVIHCRWAMLGALGCVFPDCL 421
            + RELE+IH R  +LGALG V P+ L
Sbjct: 99  KRYRELELIHARCGLLGALGMVTPELL 125



 Score = 32.0 bits (71), Expect = 0.65
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 284 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   LG
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLG 235
to top
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 80.9 bits (198), Expect = 1e-15
 Identities = 45/88 (51%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
 Frame = +2

Query: 179 AKAKQVSSGSP----WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPET 337
           AK+K VS  S     WYG DR ++L  G L   E P YL GE  GDYG+D  GL   PE 
Sbjct: 47  AKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPEN 106

Query: 338 FAKNRELEVIHCRWAMLGALGCVFPDCL 421
           FAK +  E+IH RWAMLGA G + P+ L
Sbjct: 107 FAKYQAFELIHARWAMLGAAGFIIPEAL 134
to top
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 35/89 (39%), Positives = 51/89 (57%)
 Frame = +2

Query: 155 RVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 334
           RV+   T   A+  ++       DR L+       PP +L G  PGD+G+D  GL++DPE
Sbjct: 41  RVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPE 98

Query: 335 TFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           +   N++ E++HCRWAMLGA G   P+ L
Sbjct: 99  SLRWNQQAELVHCRWAMLGAAGIFIPELL 127
to top
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 30/54 (55%), Positives = 38/54 (70%)
 Frame = +2

Query: 260 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           PP YLTGE  GD G+D AGL+ADP TF + +  EV HCR +ML  +GC+ P+ L
Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL 433



 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 28/57 (49%), Positives = 39/57 (68%)
 Frame = +2

Query: 251 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           + EPP+ LTGE+P D G+D   L+ADP+ +A+ R  EV H R AML  +GC+ P+ L
Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL 249



 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = +2

Query: 263 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           PS+L GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +G + PD L
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL 64
to top
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 65.9 bits (159), Expect = 4e-11
 Identities = 27/54 (50%), Positives = 36/54 (66%)
 Frame = +2

Query: 260 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           PP +L G  PGD+G+D  GL +DPE+   N + E++H RWAMLGA G   P+ L
Sbjct: 74  PPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFL 127
to top
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 64.7 bits (156), Expect = 9e-11
 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
 Frame = +2

Query: 104 AGKALKNLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEP-PSYLTG 280
           A   L +   PA+      + +   A A  V  G+  + S   +    + G+P PSYL G
Sbjct: 2   ASNTLMSCGIPAVCPSFLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDG 61

Query: 281 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
             PGD+G+D+ GL   P    + +E E+IHCRWAML   G + P+ L
Sbjct: 62  SAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108
to top
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 58.2 bits (139), Expect = 9e-09
 Identities = 24/55 (43%), Positives = 37/55 (67%)
 Frame = +2

Query: 257 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           +PP++LTGE+P D G+D   ++ADP  +A+ R  EV H R +ML  +G + P+ L
Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL 221



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 329 PETFAKNRELEVIHCRWAMLGALGCVFPDCL 421
           P  + + R  EV + R AML  +GCV+P+ L
Sbjct: 1   PTVYERMRVAEVFNGRLAMLAIVGCVYPELL 31
to top
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 37/97 (38%), Positives = 44/97 (45%)
 Frame = +2

Query: 110 KALKNLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFP 289
           +AL   P  A +G A    R T   A    S   W  + R    G  +   P +L G  P
Sbjct: 24  QALLAAPLAARVGGAATPKRFTVLAAAAKKS---WIPAVR----GGGNLVDPEWLDGSLP 76

Query: 290 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           GDYG+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 77  GDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113
to top
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +2

Query: 263 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAML  LG
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118
to top
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 23/51 (45%), Positives = 31/51 (60%)
 Frame = +2

Query: 263 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPD 415
           P YLTG   GD G+D  GL+ DPE      + E+++ RWAMLG  G + P+
Sbjct: 64  PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPE 114
to top
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +2

Query: 263 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113
to top
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 26/39 (66%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPW 214
           FAGKA+K  PS + I G  R+TMRKTAAK K  SSGSPW
Sbjct: 13  FAGKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
to top
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
 Frame = +2

Query: 167 RKTAAKAKQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE---T 337
           RK +   +  S+     G++R L+    S +  SYL G  PGD+G+D  GLS DPE    
Sbjct: 33  RKASFVVRAASTPPVKQGANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89

Query: 338 FAKNREL---EVIHCRWAMLGALGCVFPDCL 421
           F + + L   EVI+ R+AMLGA G + P+ L
Sbjct: 90  FIEPKWLAYGEVINGRFAMLGAAGAIAPEIL 120
to top
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 48.5 bits (114), Expect = 7e-06
 Identities = 25/39 (64%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPW 214
           FAGK +K  PS + I G  R+TMRKTAAK K  SSGSPW
Sbjct: 13  FAGKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
to top
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 35/126 (27%), Positives = 42/126 (33%), Gaps = 44/126 (34%)
 Frame = +2

Query: 161 TMRKTAAKAKQVSSGSP-WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE- 334
           T + +  KAK V S  P W+             + P YL G   GDYG+D  GL    E 
Sbjct: 37  TKKASPKKAKTVISDRPLWFPG----------AKSPEYLDGSLVGDYGFDPFGLGKPAEY 86

Query: 335 ----------TFAKN--------------------------------RELEVIHCRWAML 388
                       AKN                                RE E+IH RWAML
Sbjct: 87  LQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAML 146

Query: 389 GALGCV 406
             LG +
Sbjct: 147 ATLGAI 152



 Score = 33.5 bits (75), Expect = 0.22
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 230 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           VL +G +  +  + L  E   +PG   +D  GL++DP   A+ +  E+ H R AM+G LG
Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
to top
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
 Frame = +2

Query: 239 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALG 400
           + P +G+  S L  G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A G
Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAG 187
to top
>CLCL_RALSO (Q8XTT4) Putative chloride channel protein clcB-like|
          Length = 429

 Score = 35.8 bits (81), Expect = 0.045
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -2

Query: 313 GGVPSVVTGELTSQVAWWLAGKGAEVEHTVRAVPWAARRNLLGLRGCLA 167
           G + ++   E   Q+ WWLAG    +  T RA+PW AR  +    G LA
Sbjct: 12  GALATIAFRECLRQLQWWLAGADQGLVATARALPWWARLLVPTAGGLLA 60
to top
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 35.4 bits (80), Expect = 0.059
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 230 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 400
           VL +G +  +  + L  E   +PG   +D  GL+ADPE  A+ +  E+ H R AM+  LG
Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 35/119 (29%), Positives = 41/119 (34%), Gaps = 44/119 (36%)
 Frame = +2

Query: 182 KAKQVSSGSPWYGSDRVL-YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-------- 334
           KA    S      +DR L Y G +S   P +L G   GDYG+D  GL    E        
Sbjct: 40  KAAPKKSAKKTVTTDRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDS 96

Query: 335 ---TFAKN--------------------------------RELEVIHCRWAMLGALGCV 406
                AKN                                RE E+IH RWAML  LG +
Sbjct: 97  LDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGAL 155
to top
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 35.0 bits (79), Expect = 0.077
 Identities = 30/102 (29%), Positives = 35/102 (34%), Gaps = 45/102 (44%)
 Frame = +2

Query: 260 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 349
           PP +L G   GD G+D  GL    E             AKN                   
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 350 -------------RELEVIHCRWAMLGALGCVFPDCLP--AW 430
                        RE E+IH RWAMLG LG +  + L   AW
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAW 166



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +2

Query: 230 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 397
           VL +G +  +  S L  E   +PG Y +D  GL+ADPE     +  E+ H R AM+  L
Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
to top
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 35.0 bits (79), Expect = 0.077
 Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 101 FAGKALKNLPSPALI-GEARVTMRKTAAKAKQVSSGSPW 214
           FAG+A+K  PS + I G  R+TMRK  A AK   S SPW
Sbjct: 13  FAGQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPW 49
to top
>LDLR_RAT (P35952) Low-density lipoprotein receptor precursor (LDL receptor)|
          Length = 879

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
 Frame = -2

Query: 409 KDTTKSTEH--GPSAVNHLELPVLGEGLRVSREPGGVPSVVTGE---LTSQVAWWLAGKG 245
           K+   +T H   PSA  H E P        SR+PG  P + T E   ++SQV   +AG+G
Sbjct: 742 KEDPSATRHKEDPSATRHNEDP---SATSTSRQPGDTPELSTVESVTVSSQVQGDMAGRG 798

Query: 244 AEVE 233
            EV+
Sbjct: 799 DEVQ 802
to top
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = +2

Query: 146 GEARVTMRKTAAKAKQ-VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 322
           G A   +R T  +    VS+  PW+G ++   L    G P  + +  FPG  G    G+ 
Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166

Query: 323 ADPETFAKNRELEVIHCR 376
           AD    A  R++   H R
Sbjct: 167 ADR---AYGRDIVEAHYR 181
to top
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 32.7 bits (73), Expect = 0.38
 Identities = 42/144 (29%), Positives = 50/144 (34%), Gaps = 53/144 (36%)
 Frame = +2

Query: 134 PALIGEARVTMRKTAAKA--KQV--SSGSPWYGSDRVLYLGPLSGEP----PSYLTGEFP 289
           P    +A  T  K A KA  K+V  S+G+   G     Y G     P    P +L G  P
Sbjct: 8   PGTQKKAGTTATKPAPKATTKKVATSTGTRSGGVGYRKYQGDALWLPNTTRPEWLDGSLP 67

Query: 290 GDYGWDTAGLSADPE-----------TFAKN----------------------------- 349
           GD G+D  GLS   E             AKN                             
Sbjct: 68  GDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVF 127

Query: 350 -----RELEVIHCRWAMLGALGCV 406
                RE E+IH RWAML  LG +
Sbjct: 128 GLARFRECELIHGRWAMLACLGAL 151
to top
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 32.7 bits (73), Expect = 0.38
 Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 101 FAGKALKNLPSPAL-IGEARVTMRKTAAKAKQVSSGSPW 214
           FAG+A+K  PS +   G  R+TMRK  A AK   S SPW
Sbjct: 13  FAGQAVKLSPSASENSGNGRITMRK--AVAKSAPSSSPW 49
to top
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = +2

Query: 194 VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 373
           VSS  PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179

Query: 374 R 376
           R
Sbjct: 180 R 180
to top
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase)
          Length = 392

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +2

Query: 152 ARVTMRKTAAKAKQ-VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 328
           A   +R T  K  + V+   PW+G ++   L  ++G P  +    FPG  G    G+ AD
Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
to top
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +2

Query: 152 ARVTMRKTAAKAKQ-VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 328
           A   +R T  +    VS+  PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167

Query: 329 PETFAKNRELEVIHCR 376
               A  R++   H R
Sbjct: 168 K---AYGRDIVEAHYR 180
to top
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +2

Query: 152 ARVTMRKTAAKAKQ-VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 328
           A   +R T  +    VS+  PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGAD 167

Query: 329 PETFAKNRELEVIHCR 376
               A  R++   H R
Sbjct: 168 K---AYRRDIMEAHYR 180
to top
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 31.6 bits (70), Expect = 0.85
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +2

Query: 152 ARVTMRKTAAKAKQ-VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 328
           A   +R T  +    VS+  PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167

Query: 329 PETFAKNRELEVIHCR 376
               A  R++   H R
Sbjct: 168 K---AYGRDIVEAHYR 180
to top
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +2

Query: 152 ARVTMRKTAAKAKQ-VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 328
           A   +R T  +    VS+  PW+G ++   L    G P  + +  FPG  G    G+ AD
Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167

Query: 329 PETFAKNRELEVIHCR 376
               A  R++   H R
Sbjct: 168 R---AYGRDIVEAHYR 180
to top
>GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 354

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +2

Query: 155 RVTMRKTAAKA-KQVSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 301
           R   R  AAK  +Q     PW+G ++   L    G P  +  G FPG  G
Sbjct: 105 RTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQG 154
to top
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +2

Query: 194 VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 373
           VS+  PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179

Query: 374 R 376
           R
Sbjct: 180 R 180
to top
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +2

Query: 194 VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 373
           VS+  PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179

Query: 374 R 376
           R
Sbjct: 180 R 180
to top
>LIPB_GEOSL (Q74AE2) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier|
           protein]-protein-N-lipoyltransferase) (Lipoate-protein
           ligase B)
          Length = 227

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 210 HGTALTVCSTSAPFPASHQAT*LVSSPVTTDGTPPGSRLTL 332
           HG AL +C+  APF   H    +V  PVTT     G  +T+
Sbjct: 137 HGFALNICNDLAPFSRIHPCG-IVGCPVTTLSREAGRAITV 176
to top
>UN104_CAEEL (P23678) Kinesin-like protein unc-104 (Uncoordinated protein 104)|
          Length = 1584

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 285 SPVTTDGTPPGSRLTLRPSPRT 350
           SP+  D  PPG  LTLRP P+T
Sbjct: 738 SPLPPDLLPPGEDLTLRPYPKT 759
to top
>HYPA_HYPLI (P35587) Hypodermin A precursor (EC 3.4.21.-) (HA)|
          Length = 256

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 427 CGQAIGKDTTKSTEHGPSAVNHLELPVLGEGLRVSR 320
           C  AIGKD+ +    GP  VN+L + V+  G+  +R
Sbjct: 197 CAYAIGKDSCQGDSGGPLVVNNLLVGVVSWGIDCAR 232
to top
>KLRBA_MOUSE (P27811) Natural killer cell surface protein P1-2 (NKR-P1 2)|
           (NKR-P1.7)
          Length = 227

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 374 GSESPRAPGSWRRSQGQ--PRARRCPIRSHR 288
           G + PR PG+W  S     P A RCP RSHR
Sbjct: 9   GLKPPRTPGAWHESPPSLPPDACRCP-RSHR 38
to top
>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +2

Query: 194 VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 373
           VS+  PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H 
Sbjct: 124 VSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHY 180

Query: 374 R 376
           R
Sbjct: 181 R 181
to top
>GLNA1_DROME (P20477) Glutamine synthetase 1, mitochondrial precursor (EC|
           6.3.1.2) (Glutamate--ammonia ligase 1)
          Length = 399

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 18/69 (26%), Positives = 28/69 (40%)
 Frame = +2

Query: 194 VSSGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 373
           +S   PW+G ++   L  + G P  +    FP   G    G+ AD        E  V+ C
Sbjct: 161 ISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYCGVGADRVYARDLVEAHVVAC 220

Query: 374 RWAMLGALG 400
            +A +   G
Sbjct: 221 LYAGIDFAG 229
to top
>ANKS3_RAT (Q5M9H0) Ankyrin repeat and SAM domain-containing protein 3|
          Length = 663

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 416 NRERHNQEHRAWPIGSESPRAPGSWRRSQGQPRARRCP 303
           N+ RHN     WP  + + R PGS      +P+A + P
Sbjct: 391 NKSRHNNSDGHWPSSTGTARTPGS------EPQAEKSP 422
to top
>YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.-.-)|
          Length = 335

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 14/88 (15%)
 Frame = +2

Query: 206 SPWYGSDRVLYLGPLSGEPPSYLTGEFP----------GDYGWDTAGLSADPETFAKNRE 355
           SP+YG   VLY     G   S L  EFP          G  G +    S D   F+ +R 
Sbjct: 55  SPYYGPSEVLY-----GRALSNLRNEFPRDTYFICTKVGRIGAEEFNYSRDFVRFSVHRS 109

Query: 356 LEVIHCRWAMLGALGCV----FPDCLPA 427
            E +H  +  L  L  V    FPD L A
Sbjct: 110 CERLHTTYLDLVYLHDVEFVKFPDILEA 137
to top
>ATKB_PSEAE (P57698) Potassium-transporting ATPase B chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase B chain) (ATP
           phosphohydrolase [potassium-transporting] B chain)
           (Potassium-binding and translocating subunit B)
          Length = 690

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 20/47 (42%), Positives = 22/47 (46%)
 Frame = -2

Query: 382 GPSAVNHLELPVLGEGLRVSREPGGVPSVVTGELTSQVAWWLAGKGA 242
           G +AVN  E  + GE   V RE GG  S VTG       W L   GA
Sbjct: 159 GVAAVN--EAAITGESAPVIRESGGDRSAVTGNTQVVSDWLLVRIGA 203
to top
>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa|
           subunit related-protein 2 (U2(RNU2) small nuclear RNA
           auxillary factor 1-like 2) (NY-REN-20 antigen)
          Length = 482

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = -1

Query: 422 ASNRERHNQEHRAWPIGSESPRAPGSWRRSQGQPRARRCPIRSHRGTHQSSS 267
           + +RERHN   R         R+ G   RS+ + R+R    RS R   QSSS
Sbjct: 412 SKSRERHNSRSRGRNRDRSRDRSRGRGSRSRSRSRSR----RSRRSRSQSSS 459
to top
>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)|
          Length = 860

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +3

Query: 279 VSSPVTTDGTPPGSRLTLRPSPRTGSSR*FTADGPCSVLLVVSFPIACPHG 431
           VS+P TT   PP   LTL PS  T   R        + ++  S+   CP G
Sbjct: 647 VSAPTTT--VPPNPTLTLAPSSSTTEDR-----TTITTIITTSYVTVCPTG 690
to top
>RL13A_CYAPA (P93099) 60S ribosomal protein L13a|
          Length = 200

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = -2

Query: 418 AIGKDTTKSTEHGPSAVNHLELPVLGEGLRVSREPGGVPSVVTGELTSQVAWW---LAGK 248
           A   +  K+ E  P   + ++  V+ + LRV R   G    V G L ++V W    L  +
Sbjct: 95  AAALERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSDLVTR 154

Query: 247 GAEVEHTVRAVPWAARRNLLGLR 179
             E   T  A  +A ++ L+ LR
Sbjct: 155 LEEKRKTKSAAFYARKKTLVNLR 177
to top
>AROA_THEMA (Q9WYI0) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)|
           (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP
           synthase) (EPSPS)
          Length = 410

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -2

Query: 424 GQAIGKDTTKSTEHGPSAVNHLELPVLGEGLRVSREPG---GVPSVVTGELTSQVAWWLA 254
           G+ I  +  KS +H    + +L +PV  EG RV  EP    G    V G+++S   + + 
Sbjct: 165 GRTIVIEPAKSRDHTERMLKNLGVPVEVEGTRVVLEPATFRGFTMKVPGDISSAAFFVVL 224

Query: 253 G 251
           G
Sbjct: 225 G 225
to top
>DL_DROME (P10041) Neurogenic locus protein delta precursor|
          Length = 833

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = -2

Query: 424 GQAIGKDTTKSTEHGPSAVNHLELPVLGEGLRVS-REPGGVPSVVTGELTSQV--AWWLA 254
           G   G     ++  GP A     + VLGEG   S R P    + V G  +SQ+  A  +A
Sbjct: 754 GSPAGSSAKGASGGGPGAAEGKRISVLGEGSYCSQRWPSLAAAGVAGACSSQLMAAASVA 813

Query: 253 GKGAEVEHTVRAV 215
           G GA      R+V
Sbjct: 814 GSGAGTAQQQRSV 826
to top
>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington|
           disease gene regulatory region-binding protein 1)
           (HDBP-1)
          Length = 387

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
 Frame = +2

Query: 113 ALKNLPSPALIGEARVTMRKTAAKAKQVSSGSPWYGSDRVLYLGP----LSGEPPSYLTG 280
           A +  P  A + E       T+     +  G+P         L P    L   P SY + 
Sbjct: 92  AQRATPGKARLDEVMAAAALTSLSTSPLLLGAPVAAFSPEPGLEPWKEALVRPPGSYSSS 151

Query: 281 EFPGDYGWDTAGLSADPET 337
              GD+GWD A   + P T
Sbjct: 152 SNSGDWGWDLASDQSSPST 170
to top
>IF2_NEIG1 (Q5F797) Translation initiation factor IF-2|
          Length = 943

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 19/49 (38%), Positives = 28/49 (57%)
 Frame = -2

Query: 253 GKGAEVEHTVRAVPWAARRNLLGLRGCLAHGHTCLANESRRGQVLQGLA 107
           G+GAE E    A+P   R  ++ + G + HG T L +  RR +V+QG A
Sbjct: 431 GEGAEAEEA-EALP---RPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEA 475
to top
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 354

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = +2

Query: 155 RVTMRKTAAKAKQVSSGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 301
           R   R   AK  +++    PW+G ++   L    G P  +  G FPG  G
Sbjct: 105 RTNHRHHTAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154
to top
>GR22C_DROME (P58952) Putative gustatory receptor 22c|
          Length = 383

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = +2

Query: 329 PETFAKNRELEVIHCRWAMLGALGCVFPDCLPAW 430
           PE FA+N  LE  H    ML    CV    L  W
Sbjct: 73  PEAFARNSVLENTHYTTGMLAVFSCVVIHFLNFW 106
to top
>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC|
            2.7.11.1) (Transcription initiation factor TFIID 230 kDa
            subunit) (TAFII-230) (TAFII250) (TBP-associated factor
            230 kDa) (p230)
          Length = 2129

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 392  HRAWPIGSESPRAPGSWRRSQGQPRARRCPI 300
            H A  +   +P  PG  +R +G+PR +R P+
Sbjct: 1773 HTAPAVRKPAPPGPGEVKRGRGRPRKQRDPV 1803
to top
>GUN1_RALSO (P58599) Endoglucanase precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 424

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
 Frame = +2

Query: 179 AKAKQVSSGSP---WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 349
           AK  QV+ G+    W G   V   G   GE      G  PG YG +    SAD  T+ KN
Sbjct: 103 AKVCQVAQGTGTLLWRG---VSLAGAEFGE------GSLPGTYGSNYIYPSADSATYYKN 153

Query: 350 RELEVIHC--RWAML 388
           + + ++    RW  L
Sbjct: 154 KGMNLVRLPFRWERL 168


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,871,258
Number of Sequences: 219361
Number of extensions: 1475038
Number of successful extensions: 4908
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 4668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4885
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top