ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet97d04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB066265.2| Triticum aestivum WCSP1 mRNA for cold shock protein-1, complete cds Length = 1029 Score = 220 bits (111), Expect = 9e-55 Identities = 123/127 (96%) Strand = Plus / Plus Query: 19 cgatctagggtttcctgctagggttttagtccttcgttttcggcggcgcaagatggggga 78 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 10 cgatctagggtttcctgctagggttttggtccttcggtttcggcggcgcaagatggggga 69 Query: 79 gagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 129 Query: 139 ggaggac 145 ||||||| Sbjct: 130 ggaggac 136
>dbj|AB161683.1| Triticum aestivum WCSP3 mRNA for cold shock domain protein 3, complete cds Length = 1025 Score = 202 bits (102), Expect = 2e-49 Identities = 111/114 (97%) Strand = Plus / Plus Query: 28 gtttcctgctagggttttagtccttcgttttcggcggcgcaagatgggggagagagtgaa 87 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || Sbjct: 1 gtttcctgctagggttttggtccttcgttttcggcggcgcaagatgggggagagggtcaa 60 Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 114
>dbj|AB161682.1| Triticum aestivum WCSP2 mRNA for cold shock domain protein 2, complete cds Length = 990 Score = 196 bits (99), Expect = 1e-47 Identities = 125/133 (93%), Gaps = 3/133 (2%) Strand = Plus / Plus Query: 16 caccgatctagggtttcctgctagggttttagtccttcgttttcggcggcg---caagat 72 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1 caccgatctagggtttcctgctagggttttagtccttcgtttccggcggcggcgcaagat 60 Query: 73 gggggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 ||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 gggtgagagactgaagggtaccgtgaagtggttcaacgtgaccaaggggttcggcttcat 120 Query: 133 ctccccggaggac 145 ||||||||||||| Sbjct: 121 ctccccggaggac 133
>dbj|AB158409.1| Triticum aestivum GRP mRNA for putative glycine-rich protein, complete cds Length = 996 Score = 196 bits (99), Expect = 1e-47 Identities = 125/133 (93%), Gaps = 3/133 (2%) Strand = Plus / Plus Query: 16 caccgatctagggtttcctgctagggttttagtccttcgttttcggcggcg---caagat 72 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1 caccgatctagggtttcctgctagggttttagtccttcgtttccggcggcggcgcaagat 60 Query: 73 gggggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 ||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 gggtgagagactgaagggtaccgtgaagtggttcaacgtgaccaaggggttcggcttcat 120 Query: 133 ctccccggaggac 145 ||||||||||||| Sbjct: 121 ctccccggaggac 133
>ref|XM_463912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1219 Score = 79.8 bits (40), Expect = 2e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccc 182
>ref|XM_506692.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0088N06.21 mRNA Length = 1250 Score = 79.8 bits (40), Expect = 2e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 137 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccc 180
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 79.8 bits (40), Expect = 2e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1104156 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccc 1104113
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 79.8 bits (40), Expect = 2e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 56680 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccc 56637
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 79.8 bits (40), Expect = 2e-12 Identities = 43/44 (97%) Strand = Plus / Minus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 92864 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccc 92821
>dbj|AK119758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-F11, full insert sequence Length = 1219 Score = 79.8 bits (40), Expect = 2e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccc 182
>dbj|AK070711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061H10, full insert sequence Length = 1250 Score = 79.8 bits (40), Expect = 2e-12 Identities = 43/44 (97%) Strand = Plus / Plus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 137 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccc 180
>ref|XM_479920.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 77.8 bits (39), Expect = 8e-12 Identities = 57/63 (90%) Strand = Plus / Plus Query: 76 ggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctc 135 |||||| |||||||| || |||||||||||| ||| |||||||||||||||||||||| | Sbjct: 98 ggagagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcac 157 Query: 136 ccc 138 ||| Sbjct: 158 ccc 160 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccacaccgatctagggtttc 32 |||||||||||||||||||| Sbjct: 16 ccacaccgatctagggtttc 35
>ref|XM_507115.1| PREDICTED Oryza sativa (japonica cultivar-group), P0582D05.112 mRNA Length = 984 Score = 77.8 bits (39), Expect = 8e-12 Identities = 57/63 (90%) Strand = Plus / Plus Query: 76 ggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctc 135 |||||| |||||||| || |||||||||||| ||| |||||||||||||||||||||| | Sbjct: 98 ggagagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcac 157 Query: 136 ccc 138 ||| Sbjct: 158 ccc 160 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccacaccgatctagggtttc 32 |||||||||||||||||||| Sbjct: 16 ccacaccgatctagggtttc 35
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 77.8 bits (39), Expect = 8e-12 Identities = 57/63 (90%) Strand = Plus / Minus Query: 76 ggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctc 135 |||||| |||||||| || |||||||||||| ||| |||||||||||||||||||||| | Sbjct: 1639563 ggagagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcac 1639504 Query: 136 ccc 138 ||| Sbjct: 1639503 ccc 1639501 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ccacaccgatctagggtttc 32 |||||||||||||||||||| Sbjct: 1639645 ccacaccgatctagggtttc 1639626
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 77.8 bits (39), Expect = 8e-12 Identities = 57/63 (90%) Strand = Plus / Minus Query: 76 ggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctc 135 |||||| |||||||| || |||||||||||| ||| |||||||||||||||||||||| | Sbjct: 39063 ggagagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcac 39004 Query: 136 ccc 138 ||| Sbjct: 39003 ccc 39001 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 ccacaccgatctagggtttc 32 |||||||||||||||||||| Sbjct: 39145 ccacaccgatctagggtttc 39126
>dbj|AK101577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050L02, full insert sequence Length = 984 Score = 77.8 bits (39), Expect = 8e-12 Identities = 57/63 (90%) Strand = Plus / Plus Query: 76 ggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctc 135 |||||| |||||||| || |||||||||||| ||| |||||||||||||||||||||| | Sbjct: 98 ggagagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcac 157 Query: 136 ccc 138 ||| Sbjct: 158 ccc 160 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccacaccgatctagggtttc 32 |||||||||||||||||||| Sbjct: 16 ccacaccgatctagggtttc 35
>dbj|AK070034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A08, full insert sequence Length = 963 Score = 77.8 bits (39), Expect = 8e-12 Identities = 57/63 (90%) Strand = Plus / Plus Query: 76 ggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctc 135 |||||| |||||||| || |||||||||||| ||| |||||||||||||||||||||| | Sbjct: 98 ggagagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcac 157 Query: 136 ccc 138 ||| Sbjct: 158 ccc 160 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccacaccgatctagggtttc 32 |||||||||||||||||||| Sbjct: 16 ccacaccgatctagggtttc 35
>gb|AE005954.1| Caulobacter crescentus CB15 section 280 of 359 of the complete genome Length = 10098 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 89 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 9966 ggaaccgtgaagtggttcaactccaccaagggcttcggcttcatc 9922
>gb|AY157846.2| Chlamydomonas reinhardtii putative nucleic acid binding protein (Nab1) gene, complete cds Length = 4339 Score = 61.9 bits (31), Expect = 5e-07 Identities = 43/47 (91%) Strand = Plus / Plus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||||||| ||||||||||||| |||||| || |||||||||||| Sbjct: 538 agggaaccgtaaagtggttcaacgccaccaaaggcttcggcttcatc 584
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 60.0 bits (30), Expect = 2e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 548783 accgtgaagtggttcaacgcaaccaaagggttcggcttcatc 548742 Score = 52.0 bits (26), Expect = 5e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||||| |||||||||| |||||| || |||||||||||| Sbjct: 624210 accgtgaaatggttcaacgccaccaaaggtttcggcttcatc 624251 Score = 38.2 bits (19), Expect = 6.9 Identities = 40/47 (85%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||| ||||||||| || ||||| |||||||||||| |||| Sbjct: 2119532 accgtgaaatggttcaacagtacgaagggcttcggcttcatcgcccc 2119578
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||||||||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 2921641 accgtgaagtggttcaacgatgccaagggcttcggcttcatcaccccgga 2921592 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggac 145 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||||||| Sbjct: 1569266 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccggaggac 1569319
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 3903319 gggaaccgtgaagtggttcaacgcgaccaagggctacggcttcatc 3903364 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggaaccgtgaagtggttcaa 108 |||||||||||||||||||| Sbjct: 3613284 ggaaccgtgaagtggttcaa 3613303
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||| ||||||||||||| | ||||||| |||||||||||| ||||||| Sbjct: 1679620 accgttaagtggttcaacgacgccaagggcttcggcttcatcaccccgga 1679669 Score = 42.1 bits (21), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Plus Query: 101 tggttcaacgtcaccaaggggttcggcttcatc 133 |||||||||| | ||||||| |||||||||||| Sbjct: 2109891 tggttcaacgacgccaagggcttcggcttcatc 2109923
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 306461 gggaaccgtgaagtggttcaacgcgaccaagggctacggcttcatc 306506 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Plus Query: 89 ggaaccgtgaagtggttcaacg 110 |||||||||||||||||||||| Sbjct: 274 ggaaccgtgaagtggttcaacg 295
>gb|AE011876.1| Xanthomonas axonopodis pv. citri str. 306, section 254 of 469 of the complete genome Length = 10716 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||||||||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 6046 accgtgaagtggttcaacgatgccaagggcttcggcttcatcaccccgga 5997
>gb|AE011765.1| Xanthomonas axonopodis pv. citri str. 306, section 143 of 469 of the complete genome Length = 10446 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggac 145 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||||||| Sbjct: 2586 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccggaggac 2639
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 2051855 gggaaccgtgaagtggttcaacgcgaccaagggctacggcttcatc 2051810
>gb|AF098529.1|AF098529 Myxococcus xanthus CspB (cspB) gene, complete cds Length = 825 Score = 60.0 bits (30), Expect = 2e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||| | ||||||||||||| |||||| Sbjct: 245 accgtgaagtggttcaacgacgccaaggggttcggattcatc 286
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 60.0 bits (30), Expect = 2e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggac 145 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||||||| Sbjct: 1972271 accgtcaagtggttcaacgacgccaagggatttggcttcatctctccggaggac 1972324 Score = 46.1 bits (23), Expect = 0.028 Identities = 41/47 (87%) Strand = Plus / Minus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||||||||| |||| ||||||| |||||||||||| ||||||| Sbjct: 2882360 gtgaagtggtttaacgatgccaagggcttcggcttcatcaccccgga 2882314
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 58.0 bits (29), Expect = 7e-06 Identities = 41/45 (91%) Strand = Plus / Plus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 1450531 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 1450575 Score = 42.1 bits (21), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Minus Query: 98 aagtggttcaacgtcaccaaggggttcggcttc 130 |||||||||||| ||||||||| ||||||||| Sbjct: 1228943 aagtggttcaaccgcaccaagggtttcggcttc 1228911
>gb|AE009494.1| Brucella melitensis 16M chromosome I, section 51 of 195 of the complete sequence Length = 10029 Score = 58.0 bits (29), Expect = 7e-06 Identities = 41/45 (91%) Strand = Plus / Minus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 296 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 252
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 58.0 bits (29), Expect = 7e-06 Identities = 41/45 (91%) Strand = Plus / Plus Query: 89 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| || ||||||||||||| ||||||||| |||||||||||| Sbjct: 2052416 ggaacggtcaagtggttcaacgccaccaagggcttcggcttcatc 2052460 Score = 42.1 bits (21), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttc 130 |||||||||||| ||||||||| ||||||||| Sbjct: 118599 aagtggttcaaccgcaccaagggcttcggcttc 118631
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 58.0 bits (29), Expect = 7e-06 Identities = 41/45 (91%) Strand = Plus / Plus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 1468594 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 1468638 Score = 42.1 bits (21), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Minus Query: 98 aagtggttcaacgtcaccaaggggttcggcttc 130 |||||||||||| ||||||||| ||||||||| Sbjct: 1247052 aagtggttcaaccgcaccaagggtttcggcttc 1247020
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 58.0 bits (29), Expect = 7e-06 Identities = 41/45 (91%) Strand = Plus / Plus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 1465748 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 1465792 Score = 42.1 bits (21), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Minus Query: 98 aagtggttcaacgtcaccaaggggttcggcttc 130 |||||||||||| ||||||||| ||||||||| Sbjct: 1244202 aagtggttcaaccgcaccaagggtttcggcttc 1244170
>gb|AF317639.1| Marsilea strigosa microsatellite IIIB8 sequence Length = 430 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||| ||||||||| |||||||||||| Sbjct: 64 gtgaagtggttcaacagcaccaagggcttcggcttcatc 26
>gb|DQ122905.1| Chlamydomonas incerta putative nucleic acid-binding protein (nab1) mRNA, partial cds Length = 711 Score = 54.0 bits (27), Expect = 1e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||||||| ||||||||||||| ||| || || |||||||||||| Sbjct: 56 agggaaccgtaaagtggttcaacgccactaaaggcttcggcttcatc 102
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 54.0 bits (27), Expect = 1e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||||||||||||| ||||||||| ||||| |||||| Sbjct: 4757570 gtgaagtggttcaacgccaccaagggcttcggtttcatc 4757608 Score = 42.1 bits (21), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Plus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggg 120 |||||||||||||||||| |||| |||||||| Sbjct: 4127930 gggaaccgtgaagtggtttaacgcgaccaaggg 4127962
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 137 ||||| |||||||||||| | ||||||| |||||||||||||||| Sbjct: 1589861 accgtaaagtggttcaacacctccaagggcttcggcttcatctccc 1589816
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 52.0 bits (26), Expect = 5e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| ||||||||||||| | ||||||| |||||||||||| Sbjct: 579528 accgttaagtggttcaacgacgccaagggcttcggcttcatc 579487 Score = 46.1 bits (23), Expect = 0.028 Identities = 32/35 (91%) Strand = Plus / Minus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcat 132 ||||||||||||| |||||||| ||||||||||| Sbjct: 2435328 aagtggttcaacgagaccaagggtttcggcttcat 2435294 Score = 40.1 bits (20), Expect = 1.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||| | ||||||| || ||||||||| Sbjct: 2432261 aagtggttcaacgacgccaagggctttggcttcatc 2432296
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 52.0 bits (26), Expect = 5e-04 Identities = 47/54 (87%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggac 145 ||||| ||||||||||||| | ||||||| || || |||||||| ||||||||| Sbjct: 1950247 accgtcaagtggttcaacgacgccaagggatttggtttcatctctccggaggac 1950300 Score = 46.1 bits (23), Expect = 0.028 Identities = 41/47 (87%) Strand = Plus / Minus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||||||||| |||| ||||||| |||||||||||| ||||||| Sbjct: 2860505 gtgaagtggtttaacgatgccaagggcttcggcttcatcaccccgga 2860459
>gb|AE012228.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 136 of 460 of the complete genome Length = 11820 Score = 52.0 bits (26), Expect = 5e-04 Identities = 44/50 (88%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||| Sbjct: 926 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccgga 975
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 52.0 bits (26), Expect = 5e-04 Identities = 44/50 (88%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||| Sbjct: 3540661 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccgga 3540612 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Minus Query: 94 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||| ||||||| |||||||||||| Sbjct: 3387316 cgtgaagtggttcaacgatgccaagggcttcggcttcatc 3387277 Score = 48.1 bits (24), Expect = 0.007 Identities = 42/48 (87%) Strand = Plus / Plus Query: 94 cgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||||||||||||| | ||||||| |||||||||||| ||||||| Sbjct: 2221578 cgtgaagtggttcaatgatgccaagggcttcggcttcatcaccccgga 2221625
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 52.0 bits (26), Expect = 5e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||| | | ||||| |||||||||||| Sbjct: 296129 accgtgaagtggttcaacgacgcgaagggcttcggcttcatc 296088 Score = 48.1 bits (24), Expect = 0.007 Identities = 45/52 (86%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggagg 143 ||||||||||||||||||| | | ||||| | ||| |||||||||| ||||| Sbjct: 1431466 accgtgaagtggttcaacgacgcgaagggttacggtttcatctcccaggagg 1431517 Score = 46.1 bits (23), Expect = 0.028 Identities = 38/43 (88%) Strand = Plus / Minus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 137 |||||||||||||| | | | ||||| |||||||||||||||| Sbjct: 1475167 gtgaagtggttcaatgacgcgaagggcttcggcttcatctccc 1475125 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||| | ||||| |||||||||||| Sbjct: 3618871 accgtgaagtggttcaacgatgcgaagggcttcggcttcatc 3618830 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||| | ||||| |||||||||||| Sbjct: 1137017 accgtgaagtggttcaacgatgcgaagggcttcggcttcatc 1136976
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 1576785 gggaaccgtgaagtggtttaacgcgaccaagggctttggcttcatc 1576740
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 137 |||||||||||||||||| | | ||||| |||||||||||||||| Sbjct: 4395536 accgtgaagtggttcaacacctcgaagggcttcggcttcatctccc 4395581
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Minus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 |||||||||||||||||| |||| |||||||| | ||||||||| Sbjct: 350436 gggaaccgtgaagtggtttaacgcaaccaagggctacggcttcat 350392
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 ||||| |||||||||||| ||||||||| ||||||||||| Sbjct: 90020 accgtaaagtggttcaacagcaccaagggcttcggcttcat 90060
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 ||||| |||||||||||| ||||||||| ||||||||||| Sbjct: 134331 accgtaaagtggttcaacagcaccaagggcttcggcttcat 134371 Score = 42.1 bits (21), Expect = 0.44 Identities = 39/45 (86%) Strand = Plus / Minus Query: 89 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| || |||||||||||| ||||||||| ||||| |||||| Sbjct: 185181 ggaacggtaaagtggttcaacagcaccaagggcttcggtttcatc 185137
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Minus Query: 88 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 |||||||||||||||||| |||| |||||||| | ||||||||| Sbjct: 439414 gggaaccgtgaagtggtttaacgcgaccaagggctacggcttcat 439370 Score = 42.1 bits (21), Expect = 0.44 Identities = 36/41 (87%) Strand = Plus / Minus Query: 89 ggaaccgtgaagtggttcaacgtcaccaaggggttcggctt 129 ||||| |||||||||||||||| || ||||| |||||||| Sbjct: 2791626 ggaacagtgaagtggttcaacgcgacaaagggcttcggctt 2791586 Score = 42.1 bits (21), Expect = 0.44 Identities = 36/41 (87%) Strand = Plus / Minus Query: 89 ggaaccgtgaagtggttcaacgtcaccaaggggttcggctt 129 ||||| |||||||||||||||| || ||||| |||||||| Sbjct: 894163 ggaacagtgaagtggttcaacgcgacaaagggcttcggctt 894123
>gb|AF030523.1|AF030523 Sinorhizobium meliloti putative periplasmic iron-binding protein (afuA), cold shock protein CspA (cspA), and probable ribosomal protein (rpsU) genes, complete cds Length = 2489 Score = 50.1 bits (25), Expect = 0.002 Identities = 37/41 (90%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 ||||| |||||||||||| ||||||||| ||||||||||| Sbjct: 1392 accgtaaagtggttcaacagcaccaagggcttcggcttcat 1432
>gb|BT016623.1| Zea mays clone Contig456 mRNA sequence Length = 1039 Score = 48.1 bits (24), Expect = 0.007 Identities = 39/44 (88%) Strand = Plus / Plus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||||||||||| |||||||| ||||| |||||| |||| Sbjct: 89 gtgaagtggttcaacggaaccaagggcttcggtttcatcacccc 132
>gb|AE009135.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 161 of 256 of the complete sequence Length = 11907 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 94 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||| |||||| ||||| ||||||| |||||||||||| Sbjct: 8495 cgtgaaatggttcgacgtcgccaagggtttcggcttcatc 8534
>gb|AE012336.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 244 of 460 of the complete genome Length = 10286 Score = 48.1 bits (24), Expect = 0.007 Identities = 42/48 (87%) Strand = Plus / Minus Query: 94 cgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||||||||||||| | ||||||| |||||||||||| ||||||| Sbjct: 4466 cgtgaagtggttcaatgatgccaagggcttcggcttcatcaccccgga 4419
>gb|AE012242.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 150 of 460 of the complete genome Length = 10405 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 94 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||| ||||||| |||||||||||| Sbjct: 2162 cgtgaagtggttcaacgatgccaagggcttcggcttcatc 2201
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 48.1 bits (24), Expect = 0.007 Identities = 33/36 (91%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||| ||||| ||||||| |||||||||||| Sbjct: 1968616 aagtggttcgacgtcgccaagggcttcggcttcatc 1968651 Score = 46.1 bits (23), Expect = 0.028 Identities = 32/35 (91%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcat 132 ||||||||||||| |||||||| ||||||||||| Sbjct: 582446 aagtggttcaacgcaaccaagggcttcggcttcat 582480 Score = 40.1 bits (20), Expect = 1.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||| | ||||||||| || ||||||||| Sbjct: 1224150 aagtggttcaatggcaccaagggttttggcttcatc 1224185
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 48.1 bits (24), Expect = 0.007 Identities = 36/40 (90%) Strand = Plus / Plus Query: 94 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||| |||||| ||||| ||||||| |||||||||||| Sbjct: 1788340 cgtgaaatggttcgacgtcgccaagggtttcggcttcatc 1788379 Score = 38.2 bits (19), Expect = 6.9 Identities = 31/35 (88%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcat 132 ||||||||||||| |||||||| | ||||||||| Sbjct: 109640 aagtggttcaacgcaaccaagggctacggcttcat 109674
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 48.1 bits (24), Expect = 0.007 Identities = 39/44 (88%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||||| ||||| ||| ||||| |||||||||||| ||||||| Sbjct: 69712 aagtggtacaacgccacgaagggcttcggcttcatcaccccgga 69755 Score = 40.1 bits (20), Expect = 1.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||| ||| ||||| ||||| |||||| Sbjct: 903515 aagtggttcaacgccacgaagggcttcggtttcatc 903480
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 46.1 bits (23), Expect = 0.028 Identities = 41/47 (87%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 ||||| ||||||||||||| |||||||| || || ||||||||||| Sbjct: 1641277 accgtcaagtggttcaacgaaaccaagggctttggtttcatctcccc 1641323
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.028 Identities = 35/39 (89%) Strand = Plus / Plus Query: 94 cgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 ||||||||||||||||| | ||||||| | ||||||||| Sbjct: 1256698 cgtgaagtggttcaacgacgccaagggctacggcttcat 1256736
>gb|AE009243.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 13 of 187 of the complete sequence Length = 11036 Score = 46.1 bits (23), Expect = 0.028 Identities = 32/35 (91%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcat 132 |||||||| |||| ||||||||| ||||||||||| Sbjct: 164 aagtggtttaacgccaccaagggcttcggcttcat 198
>gb|AE008371.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 175 of 187 of the complete sequence Length = 11967 Score = 46.1 bits (23), Expect = 0.028 Identities = 32/35 (91%) Strand = Plus / Minus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcat 132 |||||||| |||| ||||||||| ||||||||||| Sbjct: 1308 aagtggtttaacgccaccaagggcttcggcttcat 1274
>gb|AF281675.1|AF281675 Mycobacterium smegmatis cold-shock protein CspA (cspA) gene, complete cds Length = 204 Score = 46.1 bits (23), Expect = 0.028 Identities = 50/59 (84%) Strand = Plus / Plus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggac 145 ||||||| |||||||||||||||| ||||| |||||||||||| |||| |||||| Sbjct: 8 agggaactgtgaagtggttcaacgcggagaagggcttcggcttcatcgcccccgaggac 66
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.028 Identities = 41/47 (87%) Strand = Plus / Plus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 379282 agggaactgtgaagtggttcaacgcggagaaggggttcggcttcatc 379328 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 94 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||| | ||||| |||||||||||| Sbjct: 3641681 cgtgaagtggttcaacggcgagaagggcttcggcttcatc 3641642
>gb|L41167.1|ARGCSP Arthrobacter globiformis strain SI55 cold shock protein (CSP) gene, complete cds Length = 914 Score = 46.1 bits (23), Expect = 0.028 Identities = 47/55 (85%) Strand = Plus / Plus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 |||||||||| ||||||||||||| ||||| |||||||||||| ||||||| Sbjct: 310 agggaaccgtcaagtggttcaacgctgaaaagggcttcggcttcatcaccccgga 364
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.11 Identities = 43/50 (86%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||| ||||||||||| | | | ||||| |||||||||||| ||||||| Sbjct: 464543 accgtcaagtggttcaatgacgcaaagggcttcggcttcatcaccccgga 464494
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 44.1 bits (22), Expect = 0.11 Identities = 34/38 (89%) Strand = Plus / Minus Query: 96 tgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| ||||| ||| |||||| ||||||||||||||| Sbjct: 158214 tgaaggggttcgacgccaccaatgggttcggcttcatc 158177
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||||| |||||||||| || || ||||||||||||||| Sbjct: 733316 accgtgaaatggttcaacgcaactaaagggttcggcttcatc 733357
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 44.1 bits (22), Expect = 0.11 Identities = 34/38 (89%) Strand = Plus / Minus Query: 96 tgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| ||||| ||| |||||| ||||||||||||||| Sbjct: 20910 tgaaggggttcgacgccaccaatgggttcggcttcatc 20873
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.11 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 aaggggttcggcttcatctccccgga 141 |||||||||||||||||| ||||||| Sbjct: 2312652 aaggggttcggcttcatcgccccgga 2312677 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 ggaaccgtgaagtggttcaacg 110 |||||||||||||||||||||| Sbjct: 1869038 ggaaccgtgaagtggttcaacg 1869017 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 2506698 accgtgaagtggttcaacg 2506680
>gb|AY658323.1| Synthetic construct Peudomonas aeruginosa clone FLH044127.01F PA3266 gene, partial cds Length = 210 Score = 44.1 bits (22), Expect = 0.11 Identities = 43/50 (86%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||| || |||||||||| | |||| || |||||||||||| ||||||| Sbjct: 22 accgtaaaatggttcaacgacgccaaaggcttcggcttcatcaccccgga 71
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| ||||||||||||| |||||||| || ||||||||| Sbjct: 547592 accgtcaagtggttcaacgagaccaagggttttggcttcatc 547551
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Minus Query: 79 gagagtgaagggaaccgtgaagtggttcaacgtcaccaaggg 120 ||||| ||||||||| || ||||||||||||| | ||||||| Sbjct: 4950396 gagagagaagggaactgttaagtggttcaacggcgccaaggg 4950355
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 44.1 bits (22), Expect = 0.11 Identities = 40/46 (86%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 137 ||||| |||||||||||| | ||||||| |||||||| ||||||| Sbjct: 4329135 accgtaaagtggttcaacacctccaagggcttcggctttatctccc 4329180
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.11 Identities = 49/58 (84%) Strand = Plus / Minus Query: 76 ggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||| |||||||| || |||||| | || ||| |||||| ||||||||||||||| Sbjct: 9401822 ggagagggtgaaggggacggtgaagggttttgacgccaccaatgggttcggcttcatc 9401765
>emb|Z81525.1|CEF33A8 Caenorhabditis elegans Cosmid F33A8, complete sequence Length = 30782 Score = 44.1 bits (22), Expect = 0.11 Identities = 28/30 (93%) Strand = Plus / Minus Query: 82 agtgaagggaaccgtgaagtggttcaacgt 111 |||||||||||| ||||| ||||||||||| Sbjct: 19602 agtgaagggaacagtgaaatggttcaacgt 19573
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.11 Identities = 43/50 (86%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||| ||||||||||||| || ||| || || ||||||||| ||||||| Sbjct: 285259 accgttaagtggttcaacgacagcaaaggctttggcttcatcaccccgga 285210
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| ||||||||||||| | ||||||| ||||| |||||| Sbjct: 1088053 accgtaaagtggttcaacgactccaagggcttcggtttcatc 1088012 Score = 40.1 bits (20), Expect = 1.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||||||||| | | ||||||| ||||| |||||| ||||||| Sbjct: 2055899 aagtggttcaatgactccaagggcttcggtttcatcaccccgga 2055856 Score = 38.2 bits (19), Expect = 6.9 Identities = 31/35 (88%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcat 132 ||||||||||||| | | ||||| ||||||||||| Sbjct: 2658257 aagtggttcaacgactcgaagggcttcggcttcat 2658291
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| ||||||||||||| |||||||| || ||||||||| Sbjct: 1866879 accgtcaagtggttcaacgagaccaagggttttggcttcatc 1866838
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 44.1 bits (22), Expect = 0.11 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 ggaaccgtgaagtggttcaacg 110 |||||||||||||||||||||| Sbjct: 96494 ggaaccgtgaagtggttcaacg 96473
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||| | ||||| |||||||||||| Sbjct: 187402 accgtgaagtggttcaacgccgaaaagggcttcggcttcatc 187443 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 201198 accgtgaagtggttcaacg 201180
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.11 Identities = 40/46 (86%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 137 |||||||||||||||||| | ||||||| ||||| || ||||||| Sbjct: 5507635 accgtgaagtggttcaacacctccaagggcttcggttttatctccc 5507680 Score = 38.2 bits (19), Expect = 6.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 94 cgtgaagtggttcaacgtcaccaaggg 120 ||||||||||||||||| | ||||||| Sbjct: 1331060 cgtgaagtggttcaacgacgccaaggg 1331086
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 44.1 bits (22), Expect = 0.11 Identities = 49/58 (84%) Strand = Plus / Minus Query: 76 ggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||| |||||||| || |||||| | || ||| |||||| ||||||||||||||| Sbjct: 99222 ggagagggtgaaggggacggtgaagggttttgacgccaccaatgggttcggcttcatc 99165
>ref|NM_063965.3| Caenorhabditis elegans C.Elegans Y-box family member (cey-1) (cey-1) mRNA, complete cds Length = 1321 Score = 44.1 bits (22), Expect = 0.11 Identities = 28/30 (93%) Strand = Plus / Plus Query: 82 agtgaagggaaccgtgaagtggttcaacgt 111 |||||||||||| ||||| ||||||||||| Sbjct: 141 agtgaagggaacagtgaaatggttcaacgt 170
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| ||||||||||||| |||||||| || ||||||||| Sbjct: 916421 accgtcaagtggttcaacgagaccaagggttttggcttcatc 916462
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.11 Identities = 34/38 (89%) Strand = Plus / Minus Query: 96 tgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| ||||| ||| |||||| ||||||||||||||| Sbjct: 25916682 tgaaggggttcgacgccaccaatgggttcggcttcatc 25916645
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.11 Identities = 49/58 (84%) Strand = Plus / Minus Query: 76 ggagagagtgaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||| |||||||| || |||||| | || ||| |||||| ||||||||||||||| Sbjct: 9399943 ggagagggtgaaggggacggtgaagggttttgacgccaccaatgggttcggcttcatc 9399886
>gb|AC084622.1|CBRG44P20 Caenorhabditis briggsae cosmid G44P20, complete sequence Length = 39166 Score = 44.1 bits (22), Expect = 0.11 Identities = 25/26 (96%) Strand = Plus / Plus Query: 86 aagggaaccgtgaagtggttcaacgt 111 ||||||||||| |||||||||||||| Sbjct: 23193 aagggaaccgtcaagtggttcaacgt 23218
>gb|AE004749.1| Pseudomonas aeruginosa PAO1, section 310 of 529 of the complete genome Length = 16841 Score = 44.1 bits (22), Expect = 0.11 Identities = 43/50 (86%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||| || |||||||||| | |||| || |||||||||||| ||||||| Sbjct: 1699 accgtaaaatggttcaacgacgccaaaggcttcggcttcatcaccccgga 1748
>gb|AF098532.1|AF098532 Myxococcus xanthus CspE (cspE) gene, complete cds Length = 1067 Score = 44.1 bits (22), Expect = 0.11 Identities = 37/42 (88%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||||||||||||| | | ||||| || ||||||||| Sbjct: 529 accgtgaagtggttcaacgacgcgaagggctttggcttcatc 570
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.11 Identities = 34/38 (89%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcatctc 135 ||||||||||||| | ||||||| || ||||||||||| Sbjct: 2675430 aagtggttcaacgacgccaagggttttggcttcatctc 2675467
>gb|U82822.1|PAU82822 Pseudomonas aeruginosa major cold shock protein CspA (cspA) gene, complete cds Length = 508 Score = 44.1 bits (22), Expect = 0.11 Identities = 43/50 (86%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 141 ||||| || |||||||||| | |||| || |||||||||||| ||||||| Sbjct: 262 accgtaaaatggttcaacgacgccaaaggcttcggcttcatcaccccgga 311
>ref|XM_588880.2| PREDICTED: Bos taurus similar to RNA-binding protein LIN-28 (LOC539705), mRNA Length = 606 Score = 42.1 bits (21), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttc 130 |||||||||||||| ||| ||||||||||||| Sbjct: 109 aagtggttcaacgtgcccatggggttcggcttc 141
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 0.44 Identities = 36/41 (87%) Strand = Plus / Plus Query: 101 tggttcaacgtcaccaaggggttcggcttcatctccccgga 141 |||||||||| |||||| || | |||||||||||| ||||| Sbjct: 2811734 tggttcaacgacaccaaaggctacggcttcatctctccgga 2811774 Score = 38.2 bits (19), Expect = 6.9 Identities = 34/39 (87%) Strand = Plus / Plus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| ||||||||||||| |||||| | ||| |||||| Sbjct: 616966 gtgaaatggttcaacgtcaacaagggctacggtttcatc 617004
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 42.1 bits (21), Expect = 0.44 Identities = 33/37 (89%) Strand = Plus / Minus Query: 94 cgtgaagtggttcaacgtcaccaaggggttcggcttc 130 |||||||||||||||| |||||||| ||||||||| Sbjct: 77836 cgtgaagtggttcaaccgaaccaagggattcggcttc 77800 Score = 40.1 bits (20), Expect = 1.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||||||| |||| ||||||| |||||||||||| Sbjct: 78108 aagtggttcgacgttgccaagggtttcggcttcatc 78073
>emb|AL672112.1|MLO672112 Mesorhizobium loti R7A symbiosis island; segment 1/4 Length = 150050 Score = 42.1 bits (21), Expect = 0.44 Identities = 39/45 (86%) Strand = Plus / Minus Query: 89 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 ||||| ||||||||||||||| |||||| || || ||||||||| Sbjct: 74107 ggaacagtgaagtggttcaacagcaccaaaggttttggcttcatc 74063
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 42.1 bits (21), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttc 130 |||||||||||| ||||||||| ||||||||| Sbjct: 114597 aagtggttcaaccgcaccaagggtttcggcttc 114629
>gb|AE005742.1| Caulobacter crescentus CB15 section 68 of 359 of the complete genome Length = 12842 Score = 42.1 bits (21), Expect = 0.44 Identities = 36/41 (87%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 132 ||||| ||||||||||||| | ||||||| || |||||||| Sbjct: 7272 accgtaaagtggttcaacgccgccaagggctttggcttcat 7312
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.44 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 gatctagggtttcctgctagggttt 44 ||||||||||||| ||||||||||| Sbjct: 8032419 gatctagggtttcatgctagggttt 8032395
>gb|AE009515.1| Brucella melitensis 16M chromosome I, section 72 of 195 of the complete sequence Length = 10735 Score = 42.1 bits (21), Expect = 0.44 Identities = 30/33 (90%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttc 130 |||||||||||| ||||||||| ||||||||| Sbjct: 2146 aagtggttcaaccgcaccaagggtttcggcttc 2178
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 42.1 bits (21), Expect = 0.44 Identities = 24/25 (96%) Strand = Plus / Minus Query: 20 gatctagggtttcctgctagggttt 44 ||||||||||||| ||||||||||| Sbjct: 70616 gatctagggtttcatgctagggttt 70592
>gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940136D9, complete sequence Length = 121820 Score = 40.1 bits (20), Expect = 1.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 94 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 133 |||||||||||||||| | |||||||||||||||||| Sbjct: 66072 cgtgaagtggttcaactccgagaaggggttcggcttcatc 66033
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 1.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggaaccgtgaagtggttcaa 108 |||||||||||||||||||| Sbjct: 2964178 ggaaccgtgaagtggttcaa 2964197
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 1.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 ||||||| |||||||||||||||| |||||||||||||| ||| |||| Sbjct: 4080766 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccc 4080715
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 87 agggaaccgtgaagtggttcaacg 110 |||||||||| ||||||||||||| Sbjct: 2283249 agggaaccgtcaagtggttcaacg 2283226
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 40.1 bits (20), Expect = 1.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 ||||||| |||||||||||||||| |||||||||||||| ||| |||| Sbjct: 271348 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccc 271297
>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 Length = 348517 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 agggaaccgtgaagtggttcaacg 110 ||||||| |||||||||||||||| Sbjct: 285659 agggaactgtgaagtggttcaacg 285682
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 40.1 bits (20), Expect = 1.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 ||||||| |||||||||||||||| |||||||||||||| ||| |||| Sbjct: 274761 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccc 274710
>emb|AL583917.1|MLEPRTN1 Mycobacterium leprae strain TN complete genome; segment 1/10 Length = 344050 Score = 40.1 bits (20), Expect = 1.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 ||||||| |||||||||||||||| |||||||||||||| ||| |||| Sbjct: 264905 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccc 264956
>emb|AL023093.1|MLCB2548 Mycobacterium leprae cosmid B2548 Length = 38916 Score = 40.1 bits (20), Expect = 1.8 Identities = 44/52 (84%) Strand = Plus / Minus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 ||||||| |||||||||||||||| |||||||||||||| ||| |||| Sbjct: 37133 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccc 37082
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 1.8 Identities = 44/52 (84%) Strand = Plus / Plus Query: 87 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 ||||||| |||||||||||||||| ||||| |||||||||||| |||| Sbjct: 2912875 agggaactgtgaagtggttcaacgctgagaagggcttcggcttcatcgcccc 2912926
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 40.1 bits (20), Expect = 1.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 63747 gtgaagtggttcaacggagagaagggattcggcttcatctcccc 63704 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 85566 accgtgaagtggttcaacg 85584
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 40.1 bits (20), Expect = 1.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 95 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 63747 gtgaagtggttcaacggagagaagggattcggcttcatctcccc 63704 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 85566 accgtgaagtggttcaacg 85584
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 1.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 87 agggaaccgtgaagtggttcaacg 110 ||||||| |||||||||||||||| Sbjct: 448253 agggaactgtgaagtggttcaacg 448276
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 38.2 bits (19), Expect = 6.9 Identities = 40/47 (85%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 138 ||||| || ||||||||| |||||| || |||||||||||| |||| Sbjct: 452936 accgtcaaatggttcaacaccaccaaaggcttcggcttcatcgcccc 452890
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 38.2 bits (19), Expect = 6.9 Identities = 31/35 (88%) Strand = Plus / Minus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcat 132 ||||||||||||| | |||| || ||||||||||| Sbjct: 1427386 aagtggttcaacgacgccaaaggtttcggcttcat 1427352
>ref|XM_450391.1| Oryza sativa (japonica cultivar-group), mRNA Length = 765 Score = 38.2 bits (19), Expect = 6.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 76 ggagagagtgaagggaaccgtgaagtggttc 106 |||||| |||||||| || |||||||||||| Sbjct: 9 ggagagggtgaaggggacggtgaagtggttc 39
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 38.2 bits (19), Expect = 6.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 66 gcaagatgggggagagagtgaagggaa 92 |||||| ||| |||||||||||||||| Sbjct: 534913 gcaagaagggagagagagtgaagggaa 534939
>gb|AC104617.9| Trypanosoma brucei chromosome 5 clone RPCI93-1P6, complete sequence Length = 152664 Score = 38.2 bits (19), Expect = 6.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 66 gcaagatgggggagagagtgaagggaa 92 |||||| ||| |||||||||||||||| Sbjct: 142359 gcaagaagggagagagagtgaagggaa 142333
>gb|AC159443.1| Trypanosoma brucei chromosome 5 clone RPCI93-30H13, complete sequence Length = 152941 Score = 38.2 bits (19), Expect = 6.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 66 gcaagatgggggagagagtgaagggaa 92 |||||| ||| |||||||||||||||| Sbjct: 151463 gcaagaagggagagagagtgaagggaa 151489
>gb|AC165254.2| Mus musculus BAC clone RP23-285H4 from chromosome 13, complete sequence Length = 229672 Score = 38.2 bits (19), Expect = 6.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 23 ctagggtttcctgctagggtttt 45 ||||||||| ||||||||||||| Sbjct: 93237 ctagggtttactgctagggtttt 93215
>gb|AE008984.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 10 of 256 of the complete sequence Length = 10537 Score = 38.2 bits (19), Expect = 6.9 Identities = 31/35 (88%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcat 132 ||||||||||||| |||||||| | ||||||||| Sbjct: 8431 aagtggttcaacgcaaccaagggctacggcttcat 8465
>ref|XM_547754.2| PREDICTED: Canis familiaris similar to neuro-oncological ventral antigen 1 isoform 2, transcript variant 1 (LOC490632), mRNA Length = 4447 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gggggagagagtgaaggga 91 ||||||||||||||||||| Sbjct: 19 gggggagagagtgaaggga 1
>ref|XM_855915.1| PREDICTED: Canis familiaris similar to neuro-oncological ventral antigen 1 isoform 2, transcript variant 7 (LOC490632), mRNA Length = 4243 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gggggagagagtgaaggga 91 ||||||||||||||||||| Sbjct: 19 gggggagagagtgaaggga 1
>ref|XM_855886.1| PREDICTED: Canis familiaris similar to neuro-oncological ventral antigen 1 isoform 2, transcript variant 6 (LOC490632), mRNA Length = 4414 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gggggagagagtgaaggga 91 ||||||||||||||||||| Sbjct: 19 gggggagagagtgaaggga 1
>ref|XM_855828.1| PREDICTED: Canis familiaris similar to neuro-oncological ventral antigen 1 isoform 2, transcript variant 4 (LOC490632), mRNA Length = 780 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gggggagagagtgaaggga 91 ||||||||||||||||||| Sbjct: 19 gggggagagagtgaaggga 1
>ref|XM_855763.1| PREDICTED: Canis familiaris similar to neuro-oncological ventral antigen 1 isoform 2, transcript variant 2 (LOC490632), mRNA Length = 4816 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 gggggagagagtgaaggga 91 ||||||||||||||||||| Sbjct: 19 gggggagagagtgaaggga 1
>gb|AY044229.1| Homo sapiens fascin gene, complete cds Length = 16952 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 ctggctcagccaccacacc 19 ||||||||||||||||||| Sbjct: 9334 ctggctcagccaccacacc 9316
>emb|AL358252.13| Human DNA sequence from clone RP11-476D13 on chromosome 1 Contains the 3' end of the gene for a novel SPRY domain containing protein, complete sequence Length = 24150 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 ggggagagagtgaagggaa 92 ||||||||||||||||||| Sbjct: 20704 ggggagagagtgaagggaa 20686
>emb|AL355799.12| Human DNA sequence from clone RP11-432D3 on chromosome 13 Contains a novel gene, complete sequence Length = 184561 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 ggggagagagtgaagggaa 92 ||||||||||||||||||| Sbjct: 83011 ggggagagagtgaagggaa 82993
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 38.2 bits (19), Expect = 6.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 87 agggaaccgtgaagtggttcaac 109 |||| |||||||||||||||||| Sbjct: 427648 agggcaccgtgaagtggttcaac 427626
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 200808 accgtgaagtggttcaacg 200790
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 35810 accgtgaagtggttcaacg 35828
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 aagatgggggagagagtga 86 ||||||||||||||||||| Sbjct: 392753 aagatgggggagagagtga 392735
>gb|AC024580.6| Homo sapiens chromosome 19 clone CTD-2621I17, complete sequence Length = 193609 Score = 38.2 bits (19), Expect = 6.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 65 cgcaagatgggggagagagtgaa 87 |||||| |||||||||||||||| Sbjct: 135182 cgcaaggtgggggagagagtgaa 135204
>gb|AC006483.3| Homo sapiens BAC clone CTB-161C1 from 7, complete sequence Length = 196416 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 ctggctcagccaccacacc 19 ||||||||||||||||||| Sbjct: 101370 ctggctcagccaccacacc 101388
>gb|AF183396.1| Musca domestica P element MdP1 transposase (tnp) pseudogene, complete sequence Length = 2716 Score = 38.2 bits (19), Expect = 6.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 41 gttttagtccttcgttttcggcg 63 ||||| ||||||||||||||||| Sbjct: 264 gtttttgtccttcgttttcggcg 242
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 38.2 bits (19), Expect = 6.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 76 ggagagagtgaagggaaccgtgaagtggttc 106 |||||| |||||||| || |||||||||||| Sbjct: 5121985 ggagagggtgaaggggacggtgaagtggttc 5122015
>gb|AC078863.15|AC078863 Mus musculus BAC RP23-406N7 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 188008 Score = 38.2 bits (19), Expect = 6.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 67 caagatgggggagagagtgaagg 89 |||||||||| |||||||||||| Sbjct: 46257 caagatggggcagagagtgaagg 46235
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 5821565 accgtgaagtggttcaacg 5821583 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 5434031 accgtgaagtggttcaacg 5434013 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 5102784 accgtgaagtggttcaacg 5102802
>gb|AC012355.10| Homo sapiens BAC clone RP11-239I4 from 2, complete sequence Length = 120112 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 ggtttcctgctagggtttt 45 ||||||||||||||||||| Sbjct: 83492 ggtttcctgctagggtttt 83474
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 38.2 bits (19), Expect = 6.9 Identities = 28/31 (90%) Strand = Plus / Plus Query: 76 ggagagagtgaagggaaccgtgaagtggttc 106 |||||| |||||||| || |||||||||||| Sbjct: 124102 ggagagggtgaaggggacggtgaagtggttc 124132
>gb|AF098531.1|AF098531 Myxococcus xanthus CspD (cspD) gene, complete cds Length = 1069 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 453 accgtgaagtggttcaacg 471
>gb|U70990.1|SAU70990 Stigmatella aurantiaca cold shock-like protein (cspA) gene, complete cds Length = 894 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 319 accgtgaagtggttcaacg 337
>gb|AF162937.1|AF162937 Streptomyces coelicolor A3(2) F40 (f40) gene, complete cds Length = 523 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 92 accgtgaagtggttcaacg 110 ||||||||||||||||||| Sbjct: 297 accgtgaagtggttcaacg 315
>gb|AC122486.4| Mus musculus BAC clone RP24-380B9 from 12, complete sequence Length = 128253 Score = 38.2 bits (19), Expect = 6.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 71 atgggggagagagtgaagg 89 ||||||||||||||||||| Sbjct: 72773 atgggggagagagtgaagg 72755
>emb|AL929186.7| Mouse DNA sequence from clone RP23-399K8 on chromosome 2, complete sequence Length = 198573 Score = 38.2 bits (19), Expect = 6.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 67 caagatgggggagagagtgaagg 89 |||||||||| |||||||||||| Sbjct: 160994 caagatggggcagagagtgaagg 161016
>ref|NM_001031774.2| Gallus gallus lin-28 homolog (C. elegans) (LIN28), mRNA Length = 1499 Score = 38.2 bits (19), Expect = 6.9 Identities = 34/39 (87%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcatctcc 136 ||||||||||||||| || ||| ||||||||| ||||| Sbjct: 221 aagtggttcaacgtccgcatgggcttcggcttcctctcc 259
>gb|DQ127226.2| Gallus gallus LIN28A mRNA, complete cds Length = 1499 Score = 38.2 bits (19), Expect = 6.9 Identities = 34/39 (87%) Strand = Plus / Plus Query: 98 aagtggttcaacgtcaccaaggggttcggcttcatctcc 136 ||||||||||||||| || ||| ||||||||| ||||| Sbjct: 221 aagtggttcaacgtccgcatgggcttcggcttcctctcc 259 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,139,400 Number of Sequences: 3902068 Number of extensions: 1139400 Number of successful extensions: 66109 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 148 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 64313 Number of HSP's gapped (non-prelim): 1789 length of query: 145 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 124 effective length of database: 17,151,101,840 effective search space: 2126736628160 effective search space used: 2126736628160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
