>COX42_RAT (Q91Y94) Cytochrome c oxidase subunit 4 isoform 2, mitochondrial|
           precursor (EC 1.9.3.1) (Cytochrome c oxidase subunit IV
           isoform 2) (COX IV-2)
          Length = 172

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = -3

Query: 136 RGTHRGGAAASTSPWRMDSAVVCYDCIHERSY 41
           +GTH  G+AAS+S  RM   V   DC  +RSY
Sbjct: 19  QGTHSPGSAASSSQRRMTPYV---DCYAQRSY 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,702,663
Number of Sequences: 219361
Number of extensions: 223977
Number of successful extensions: 528
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 80,573,946
effective HSP length: 53
effective length of database: 68,947,813
effective search space used: 1654747512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)