Clone Information

BLAST Search Result

Clone Name	baet97c12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|AY968588.1\| Triticum aestivum ice recrystallization inhibitio...	58	1e-05
2	gb\|AC092081.3\| Gallus gallus clone WAG-77D19, complete sequence	44	0.19
3	gb\|AC164539.4\| Mus musculus chromosome 1, clone wi1-168J17, comp...	42	0.76
4	gb\|AC108318.8\| Rattus norvegicus 2 BAC CH230-256E18 (Children's ...	42	0.76
5	gb\|AC134397.6\| Mus musculus chromosome 13, clone RP23-265J12, co...	42	0.76
6	emb\|CR954189.2\| Medicago truncatula chromosome 5 clone mte1-73d1...	42	0.76
7	emb\|AL355585.15\| Human DNA sequence from clone RP11-535I8 on chr...	42	0.76
8	gb\|AY074396.1\| Chlorobium limicola rare lipoprotein A (rlpA), cy...	42	0.76
9	ref\|XM_678563.1\| PREDICTED: Danio rerio similar to Serine/threon...	42	0.76
10	gb\|AC154460.2\| Mus musculus BAC clone RP24-163G22 from chromosom...	42	0.76
11	emb\|AL929492.6\| Zebrafish DNA sequence from clone CH211-155K1, c...	42	0.76
12	ref\|NM_190487.1\| Oryza sativa (japonica cultivar-group), predic...	40	3.0
13	gb\|AC093353.11\| Mus musculus chromosome 10, clone RP23-19C22, co...	40	3.0
14	gb\|AC133214.3\| Mus musculus BAC clone RP23-72A15 from chromosome...	40	3.0
15	ref\|XM_389782.1\| Gibberella zeae PH-1 chromosome 4 hypothetical ...	40	3.0
16	gb\|AC124415.4\| Mus musculus BAC clone RP24-298J2 from chromosome...	40	3.0
17	gb\|AC012569.18\| Homo sapiens chromosome , clone RP11-8H2, comple...	40	3.0
18	emb\|AL589678.9\| Human DNA sequence from clone RP11-74C3 on chrom...	40	3.0
19	emb\|AL451140.15\| Human DNA sequence from clone RP11-540H22 on ch...	40	3.0
20	emb\|AL050318.13\|HSDJ977B1 Human DNA sequence from clone RP5-977B...	40	3.0
21	emb\|AL033525.10\|HS1108H3 Human DNA sequence from clone RP5-1108H...	40	3.0
22	gb\|AC164004.3\| Mus musculus chromosome 5, clone RP23-58C20, comp...	40	3.0
23	emb\|BX572594.1\| Rhodopseudomonas palustris CGA009 complete genom...	40	3.0
24	gb\|AC092548.10\| Oryza sativa chromosome 10 BAC OSJNBa0073L01 gen...	40	3.0
25	gb\|AC084754.14\| Homo sapiens 12p BAC RP11-874G11 (Roswell Park C...	40	3.0
26	gb\|CP000250.1\| Rhodopseudomonas palustris HaA2, complete genome	40	3.0
27	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	3.0
28	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	3.0
29	gb\|AC097375.3\| Homo sapiens BAC clone RP11-73G16 from 4, complet...	40	3.0
30	gb\|AC107078.4\| Homo sapiens BAC clone RP11-582N16 from 2, comple...	40	3.0
31	gb\|CP000251.1\| Anaeromyxobacter dehalogenans 2CP-C, complete genome	40	3.0
32	dbj\|AP003271.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	3.0
33	gb\|AC103897.3\| Papio anubis clone RP41-461D5, complete sequence	40	3.0
34	emb\|AL031427.15\|HS167A19 Human DNA sequence from clone RP1-167A1...	40	3.0
35	dbj\|AK068741.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	3.0
36	emb\|AL646053.1\| Ralstonia solanacearum GMI1000 megaplasmid compl...	40	3.0
37	gb\|AC102476.14\| Mus musculus chromosome 5, clone RP24-396L12, co...	40	3.0
38	gb\|DQ019626.1\| Triticum aestivum pre-mRNA processing factor (RSZ...	40	3.0
39	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	40	3.0
40	emb\|AL355099.5\|CNS05TCI Human chromosome 14 DNA sequence BAC R-1...	40	3.0
41	emb\|AL606916.4\| Mouse DNA sequence from clone RP23-144L24 on chr...	40	3.0

>gb|AY968588.1| Triticum aestivum ice recrystallization inhibition protein 1
           precursor, mRNA, complete cds
          Length = 1079

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 89/109 (81%)
 Strand = Plus / Plus

                                                                       
Query: 91  tccatggcgaggtgctggctgctgctcctcctctgtgcgttcctctggccggcggtgagc 150
           ||||||||||  ||| |||||||||||||  |||  |||||||||| ||||||||   | 
Sbjct: 86  tccatggcgaaatgcgggctgctgctcctgttcttggcgttcctcttgccggcggcacgt 145

                                                            
Query: 151 gcgacgccgtgccaccaccacgacctccacgcgctgcggggcttcgccg 199
           || ||| ||||||||| | | |||||||  ||||| |||||||||||||
Sbjct: 146 gcaacgtcgtgccaccccgatgacctccgtgcgctacggggcttcgccg 194

to top

>gb|AC092081.3| Gallus gallus clone WAG-77D19, complete sequence
          Length = 144092

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 7      cacttgctttccaaaacaaaac 28
              ||||||||||||||||||||||
Sbjct: 107596 cacttgctttccaaaacaaaac 107617

to top

>gb|AC164539.4| Mus musculus chromosome 1, clone wi1-168J17, complete sequence
          Length = 43396

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    cgtgtatacagtcatagcaga 72
             |||||||||||||||||||||
Sbjct: 24908 cgtgtatacagtcatagcaga 24888

to top

>gb|AC108318.8| Rattus norvegicus 2 BAC CH230-256E18 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 210322

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 2      aacaacacttgctttccaaaacaaa 26
              |||||||||||||||||||| ||||
Sbjct: 123330 aacaacacttgctttccaaaccaaa 123354

to top

>gb|AC134397.6| Mus musculus chromosome 13, clone RP23-265J12, complete sequence
          Length = 192662

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 6      acacttgctttccaaaacaaa 26
              |||||||||||||||||||||
Sbjct: 178732 acacttgctttccaaaacaaa 178712

to top

>emb|CR954189.2| Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE
          Length = 110556

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 161  gccaccaccacgacctccacg 181
            |||||||||||||||||||||
Sbjct: 8183 gccaccaccacgacctccacg 8163

to top

>emb|AL355585.15| Human DNA sequence from clone RP11-535I8 on chromosome 9 Contains a
             meningioma expressed antigen 6 (coiled-coil proline-rich)
             (MGEA6) pseudogene, complete sequence
          Length = 76321

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   gtgctggctgctgctcctcct 122
             |||||||||||||||||||||
Sbjct: 47116 gtgctggctgctgctcctcct 47096

to top

>gb|AY074396.1| Chlorobium limicola rare lipoprotein A (rlpA), cytochrome c subunit
            of flavocytochrome c sulfide dehydrogenase (soxE), and
            flavoprotein subunit of flavocytochrome c sulfide
            dehydrogenase (soxF1) genes, complete cds
          Length = 7272

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 147  gagcgcgacgccgtgccaccaccac 171
            ||||| |||||||||||||||||||
Sbjct: 4619 gagcgagacgccgtgccaccaccac 4595

to top

>ref|XM_678563.1| PREDICTED: Danio rerio similar to Serine/threonine-protein kinase
           Pim-3 (LOC555903), mRNA
          Length = 1038

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 103 tgctggctgctgctcctcctc 123
           |||||||||||||||||||||
Sbjct: 209 tgctggctgctgctcctcctc 189

to top

>gb|AC154460.2| Mus musculus BAC clone RP24-163G22 from chromosome 13, complete
             sequence
          Length = 197149

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     acacttgctttccaaaacaaa 26
             |||||||||||||||||||||
Sbjct: 92007 acacttgctttccaaaacaaa 91987

to top

>emb|AL929492.6| Zebrafish DNA sequence from clone CH211-155K1, complete sequence
          Length = 157062

 Score = 42.1 bits (21), Expect = 0.76
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 103    tgctggctgctgctcctcctc 123
              |||||||||||||||||||||
Sbjct: 110936 tgctggctgctgctcctcctc 110956

to top

>ref|NM_190487.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 426

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 202 gagctcggcggcgggggagc 221
           ||||||||||||||||||||
Sbjct: 246 gagctcggcggcgggggagc 227

to top

>gb|AC093353.11| Mus musculus chromosome 10, clone RP23-19C22, complete sequence
          Length = 188921

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    ctggctgctgctcctcctct 124
              ||||||||||||||||||||
Sbjct: 175717 ctggctgctgctcctcctct 175736

to top

>gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome 10, complete sequence
          Length = 157067

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    ctggctgctgctcctcctct 124
              ||||||||||||||||||||
Sbjct: 129634 ctggctgctgctcctcctct 129615

to top

>ref|XM_389782.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09606.1)
           partial mRNA
          Length = 2178

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 95  tggcgaggtgctggctgctg 114
           ||||||||||||||||||||
Sbjct: 971 tggcgaggtgctggctgctg 952

to top

>gb|AC124415.4| Mus musculus BAC clone RP24-298J2 from chromosome 10, complete sequence
          Length = 160137

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   ctggctgctgctcctcctct 124
             ||||||||||||||||||||
Sbjct: 92027 ctggctgctgctcctcctct 92046

to top

>gb|AC012569.18| Homo sapiens chromosome , clone RP11-8H2, complete sequence
          Length = 153276

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    gctggctgctgctcctcctc 123
              ||||||||||||||||||||
Sbjct: 112277 gctggctgctgctcctcctc 112296

to top

>emb|AL589678.9| Human DNA sequence from clone RP11-74C3 on chromosome 9 Contains the 3'
             end of a novel gene, complete sequence
          Length = 134922

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   gtgctggctgctgctcctcc 121
             ||||||||||||||||||||
Sbjct: 37845 gtgctggctgctgctcctcc 37826

to top

>emb|AL451140.15| Human DNA sequence from clone RP11-540H22 on chromosome 9 Contains the 5'
              end of a novel gene and the 3' end of a novel gene,
              complete sequence
          Length = 187738

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    gtgctggctgctgctcctcc 121
              ||||||||||||||||||||
Sbjct: 159298 gtgctggctgctgctcctcc 159279

to top

>emb|AL050318.13|HSDJ977B1 Human DNA sequence from clone RP5-977B1 on chromosome 20 Contains the
             3' end of the SLA2 gene for Src-like-adaptor 2, the
             HNRPA3P gene for heterogeneous nuclear ribonucleoprotein
             A3 pseudogene, the C20orf24 gene for chromosome 24 open
             reading frame 24 (putative RAB5-interacting protein), the
             TGIF2 gene for TGF(beta)-induced transcription factor 2,
             the MYRL2 gene for myosin regulatory light chain 2 (smooth
             muscle variant), the 3' end of a novel gene (KIAA0964), a
             novel gene, and three CpG islands, complete sequence
          Length = 145068

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   gctcggcggcgggggagccctgct 227
             ||||||||||||||| ||||||||
Sbjct: 84855 gctcggcggcgggggggccctgct 84832

to top

>emb|AL033525.10|HS1108H3 Human DNA sequence from clone RP5-1108H3 on chromosome 1p35.1-36.31
             Contains ESTs, STSs, GSSs and an ata repeat polymorphism,
             complete sequence
          Length = 164901

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   gtgctggctgctgctcctcc 121
             ||||||||||||||||||||
Sbjct: 95556 gtgctggctgctgctcctcc 95575

to top

>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence
          Length = 198872

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    ccaccaccacgacctccacg 181
              ||||||||||||||||||||
Sbjct: 182405 ccaccaccacgacctccacg 182386

to top

>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    cgccgaagagctcggcggcg 214
              ||||||||||||||||||||
Sbjct: 202082 cgccgaagagctcggcggcg 202063

to top

>gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L01 genomic sequence, complete
             sequence
          Length = 179199

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   ccaccaccacgacctccacg 181
             ||||||||||||||||||||
Sbjct: 62649 ccaccaccacgacctccacg 62668

to top

>gb|AC084754.14| Homo sapiens 12p BAC RP11-874G11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 176626

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   gtgctggctgctgctcctcc 121
             ||||||||||||||||||||
Sbjct: 42305 gtgctggctgctgctcctcc 42324

to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     cgccgaagagctcggcggcg 214
               ||||||||||||||||||||
Sbjct: 3347078 cgccgaagagctcggcggcg 3347059

to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 162      ccaccaccacgacctccacg 181
                ||||||||||||||||||||
Sbjct: 10731881 ccaccaccacgacctccacg 10731900

to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 202      gagctcggcggcgggggagc 221
                ||||||||||||||||||||
Sbjct: 35838112 gagctcggcggcgggggagc 35838131

to top

>gb|AC097375.3| Homo sapiens BAC clone RP11-73G16 from 4, complete sequence
          Length = 183746

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    tcctcctctgtgcgttcctc 135
              ||||||||||||||||||||
Sbjct: 110615 tcctcctctgtgcgttcctc 110596

to top

>gb|AC107078.4| Homo sapiens BAC clone RP11-582N16 from 2, complete sequence
          Length = 31946

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   gtgctggctgctgctcctcc 121
             ||||||||||||||||||||
Sbjct: 17053 gtgctggctgctgctcctcc 17034

to top

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    gcgctgcggggcttcgccga 200
              ||||||||||||||||||||
Sbjct: 456555 gcgctgcggggcttcgccga 456574

to top

>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506B12
          Length = 170759

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    gagctcggcggcgggggagc 221
              ||||||||||||||||||||
Sbjct: 102570 gagctcggcggcgggggagc 102589

to top

>gb|AC103897.3| Papio anubis clone RP41-461D5, complete sequence
          Length = 156269

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    gtgctggctgctgctcctcc 121
              ||||||||||||||||||||
Sbjct: 122140 gtgctggctgctgctcctcc 122121

to top

>emb|AL031427.15|HS167A19 Human DNA sequence from clone RP1-167A19 on chromosome 1p32.1-33,
             complete sequence
          Length = 152037

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   ctgctgctcctcctctgtgc 128
             ||||||||||||||||||||
Sbjct: 44469 ctgctgctcctcctctgtgc 44450

to top

>dbj|AK068741.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168I20, full
           insert sequence
          Length = 669

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 gagctcggcggcgggggagc 221
           ||||||||||||||||||||
Sbjct: 180 gagctcggcggcgggggagc 199

to top

>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    ggcggtgagcgcgacgccgt 160
              ||||||||||||||||||||
Sbjct: 713840 ggcggtgagcgcgacgccgt 713859

to top

>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence
          Length = 181047

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   ccaccaccacgacctccacg 181
             ||||||||||||||||||||
Sbjct: 98899 ccaccaccacgacctccacg 98918

to top

>gb|DQ019626.1| Triticum aestivum pre-mRNA processing factor (RSZ22) mRNA, complete
           cds
          Length = 940

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 ccaccaccacgacctccacg 181
           ||||||||||||||||||||
Sbjct: 370 ccaccaccacgacctccacg 351

to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 162      ccaccaccacgacctccacg 181
                ||||||||||||||||||||
Sbjct: 10737920 ccaccaccacgacctccacg 10737939

to top

>emb|AL355099.5|CNS05TCI Human chromosome 14 DNA sequence BAC R-1A16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 155827

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   gtgctggctgctgctcctcc 121
             ||||||||||||||||||||
Sbjct: 88765 gtgctggctgctgctcctcc 88746

to top

>emb|AL606916.4| Mouse DNA sequence from clone RP23-144L24 on chromosome 4, complete
              sequence
          Length = 190214

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    ggctgctgctcctcctctgt 126
              ||||||||||||||||||||
Sbjct: 106104 ggctgctgctcctcctctgt 106085


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,479,259
Number of Sequences: 3902068
Number of extensions: 2479259
Number of successful extensions: 54596
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54161
Number of HSP's gapped (non-prelim): 434
length of query: 234
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 212
effective length of database: 17,147,199,772
effective search space: 3635206351664
effective search space used: 3635206351664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result