>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR)
          Length = 1490

 Score =  474 bits (239), Expect = e-131
 Identities = 239/239 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  gcagcacagtgcactcgagttcgagctcgttgaactcctgcagtgcagtgctagctagcg 70

                                                                       
Query: 83  acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  acagtccaagctcaccgtcatccatggctctccagcttctcccctccaccctctccgtcc 130

                                                                       
Query: 143 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ccaagaagggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcg 190

                                                                      
Query: 203 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcct 261
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tgagcagcaaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcct 249

>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase
          Length = 1484

 Score =  291 bits (147), Expect = 6e-76
 Identities = 165/171 (96%)
 Strand = Plus / Plus

                                                                       
Query: 91  agctcaccgtcatccatggctctccagcttctcccctccaccctctccgtccccaagaag 150
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 58  agctcaccgtcatccatggctctccagctcctcccctccaccctctccgtccccaagaag 117

                                                                       
Query: 151 ggcagcagcatgggcgcagtggcggtgaaggacacggcggcgttcctgggcgtgagcagc 210
           || |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 118 ggtagcagcatgggcgcggcggcagtgaaggacacggcggcgttcctgggcgtgagcagc 177

                                                              
Query: 211 aaggcgaagaaggcgtcgctggcggtgaggacgcaggtggccacggcgcct 261
           |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 178 aaggcgaagaaggcgtcgctagcggtgaggacgcaggtggccacggcgcct 228

>ref|XM_957279.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial
            mRNA
          Length = 5772

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 199  ggcgtgagcagcaaggcgaagaagg 223
            ||||||||||||||||| |||||||
Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722

>ref|XM_326192.1| Neurospora crassa OR74A hypothetical protein (NCU06338.1) partial
            mRNA
          Length = 5772

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 199  ggcgtgagcagcaaggcgaagaagg 223
            ||||||||||||||||| |||||||
Sbjct: 5698 ggcgtgagcagcaaggcaaagaagg 5722

>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence
          Length = 164612

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   cttctcccctccaccctctcc 138
             |||||||||||||||||||||
Sbjct: 42019 cttctcccctccaccctctcc 41999

>ref|XM_479797.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2387

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 205  agcagcaaggcgaagaaggcgtcgctgg 232
            |||||||||||||| |||||| ||||||
Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703

>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 211     aaggcgaagaaggcgtcgctggcg 234
               |||| |||||||||||||||||||
Sbjct: 3274483 aaggggaagaaggcgtcgctggcg 3274506

>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence
          Length = 211910

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ctctccagcttctcccctcc 129
              ||||||||||||||||||||
Sbjct: 118208 ctctccagcttctcccctcc 118189

>gb|AC126798.3| Mus musculus BAC clone RP24-229N7 from chromosome 1, complete sequence
          Length = 172452

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    ccccaagaagggcagcagca 160
              ||||||||||||||||||||
Sbjct: 124088 ccccaagaagggcagcagca 124069

>gb|AC098882.3| Mus musculus BAC clone RP23-122D13 from 12, complete sequence
          Length = 223130

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     gcagtgcagtgctagctagc 81
              ||||||||||||||||||||
Sbjct: 181503 gcagtgcagtgctagctagc 181484

>emb|CR666827.2|CNS0FDHT Tetraodon nigroviridis full-length cDNA
          Length = 555

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 174 ggtgaaggacacggcggcgt 193
           ||||||||||||||||||||
Sbjct: 224 ggtgaaggacacggcggcgt 205

>gb|AF498106.1| Aedes aegypti relish R7 isoform mRNA, complete cds; alternatively
            spliced
          Length = 2730

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   agctcgttgaactcctgcag 65
            ||||||||||||||||||||
Sbjct: 1390 agctcgttgaactcctgcag 1409

>gb|AF498105.1| Aedes aegypti relish R6 isoform mRNA, complete cds; alternatively
            spliced
          Length = 3280

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   agctcgttgaactcctgcag 65
            ||||||||||||||||||||
Sbjct: 1941 agctcgttgaactcctgcag 1960

>gb|AC159211.2| Mus musculus BAC clone RP23-33F21 from chromosome 12, complete
            sequence
          Length = 201550

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   gcagtgcagtgctagctagc 81
            ||||||||||||||||||||
Sbjct: 2135 gcagtgcagtgctagctagc 2154

>gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, complete sequence
          Length = 104285

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   ccagcttctcccctccaccc 133
             ||||||||||||||||||||
Sbjct: 51908 ccagcttctcccctccaccc 51927

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 209     gcaaggcgaagaaggcgtcg 228
               ||||||||||||||||||||
Sbjct: 1457481 gcaaggcgaagaaggcgtcg 1457500

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 205    agcagcaaggcgaagaaggcgtcgctgg 232
              |||||||||||||| |||||| ||||||
Sbjct: 971854 agcagcaaggcgaacaaggcggcgctgg 971881

>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence
          Length = 185555

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 111   tctccagcttctcccctccaccct 134
             ||||||||||||| ||||||||||
Sbjct: 85347 tctccagcttctctcctccaccct 85370

>gb|AE004696.1| Pseudomonas aeruginosa PAO1, section 257 of 529 of the complete
            genome
          Length = 14449

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  ggcgtcgctggcggtgagga 241
            ||||||||||||||||||||
Sbjct: 4846 ggcgtcgctggcggtgagga 4865

>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470F10
          Length = 185294

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 205    agcagcaaggcgaagaaggcgtcgctgg 232
              |||||||||||||| |||||| ||||||
Sbjct: 134592 agcagcaaggcgaacaaggcggcgctgg 134619

>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
           BAC clone:OJ1005_B05
          Length = 144799

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 205 agcagcaaggcgaagaaggcgtcgctgg 232
           |||||||||||||| |||||| ||||||
Sbjct: 381 agcagcaaggcgaacaaggcggcgctgg 408

>dbj|AK067392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104G24, full
            insert sequence
          Length = 2387

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 205  agcagcaaggcgaagaaggcgtcgctgg 232
            |||||||||||||| |||||| ||||||
Sbjct: 1676 agcagcaaggcgaacaaggcggcgctgg 1703


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,334,269
Number of Sequences: 3902068
Number of extensions: 2334269
Number of successful extensions: 46591
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46491
Number of HSP's gapped (non-prelim): 100
length of query: 261
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 239
effective length of database: 17,147,199,772
effective search space: 4098180745508
effective search space used: 4098180745508
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)