Clone Information

BLAST Search Result

Clone Name	baet97c10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	119	1e-27
2	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	117	5e-27
3	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	114	8e-26
4	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	114	8e-26
5	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	108	4e-24
6	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	107	7e-24
7	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	107	1e-23
8	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	106	1e-23
9	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	100	7e-22
10	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	100	7e-22
11	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	100	2e-21
12	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	100	2e-21
13	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	99	3e-21
14	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	99	3e-21
15	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	99	3e-21
16	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	98	6e-21
17	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	98	6e-21
18	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	98	6e-21
19	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	97	8e-21
20	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	97	1e-20
21	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	97	1e-20
22	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	96	2e-20
23	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	96	3e-20
24	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	95	4e-20
25	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	95	5e-20
26	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	94	6e-20
27	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	94	8e-20
28	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	94	8e-20
29	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	94	8e-20
30	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	93	1e-19
31	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	93	1e-19
32	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	93	2e-19
33	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	92	3e-19
34	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	92	3e-19
35	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	89	4e-18
36	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	82	3e-16
37	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	82	4e-16
38	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	79	2e-15
39	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	77	1e-14
40	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	75	3e-14
41	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	75	3e-14
42	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	75	3e-14
43	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	75	5e-14
44	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	75	5e-14
45	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	74	7e-14
46	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	74	7e-14
47	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	74	7e-14
48	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	72	3e-13
49	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	72	4e-13
50	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	69	3e-12
51	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	67	8e-12
52	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	65	3e-11
53	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	64	7e-11
54	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	59	2e-09
55	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	58	7e-09
56	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	54	1e-07
57	CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl...	42	5e-04
58	CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...	42	5e-04
59	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	42	5e-04
60	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	37	0.009
61	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	33	0.23
62	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	31	0.67
63	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	31	0.87
64	CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...	31	0.87
65	CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...	31	0.87
66	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	30	1.1
67	O11H6_HUMAN (Q8NGC7) Olfactory receptor 11H6 (Olfactory receptor...	29	2.5
68	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	29	2.5
69	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	29	2.5
70	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	29	2.5
71	GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	3.3
72	PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS5...	29	3.3
73	GLNA_SUIBO (Q8J1R3) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	5.6
74	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	28	5.6
75	GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	5.6
76	S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (G...	28	5.6
77	PROB_SILPO (Q5LRY5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut...	27	9.6
78	HUR_STRAU (Q00923) Hydroxyurea phosphotransferase (EC 2.7.-.-) (...	27	9.6

>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  119 bits (299), Expect = 1e-27
 Identities = 55/68 (80%), Positives = 57/68 (83%)
 Frame = +1

Query: 136 GTPVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 315
           GTP+K      FGEGRITMRKT GKPKVAAS SPWYG DRV YLGP SG+PPSYLTGEFP
Sbjct: 15  GTPIKVGS---FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 71

Query: 316 GDYGWDTA 339
           GDYGWDTA
Sbjct: 72  GDYGWDTA 79

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  117 bits (294), Expect = 5e-27
 Identities = 55/69 (79%), Positives = 60/69 (86%), Gaps = 2/69 (2%)
 Frame = +1

Query: 139 TPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEF 312
           +P  A +AA   FGEGRITMRK+A KPK AAS SPWYG+DRVLYLGPLSG+PPSYLTGEF
Sbjct: 10  SPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEF 69

Query: 313 PGDYGWDTA 339
           PGDYGWDTA
Sbjct: 70  PGDYGWDTA 78

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  114 bits (284), Expect = 8e-26
 Identities = 53/67 (79%), Positives = 55/67 (82%)
 Frame = +1

Query: 136 GTPVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 315
           G P   +R   FGEGRITMRKTA KPK A S SPWYG+DRVLYLGPLSG PPSYLTGEFP
Sbjct: 15  GKPAAGTRDV-FGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFP 73

Query: 316 GDYGWDT 336
           GDYGWDT
Sbjct: 74  GDYGWDT 80

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  114 bits (284), Expect = 8e-26
 Identities = 59/74 (79%), Positives = 62/74 (83%), Gaps = 7/74 (9%)
 Frame = +1

Query: 139 TPVKASRAAP------FGEGRITMRKTAGKPKVAASS-SPWYGSDRVLYLGPLSGDPPSY 297
           +PV A RAAP      FGE RITMRKTA KPK AASS SPWYG+DRVLYLGPLSG+PPSY
Sbjct: 10  SPVMA-RAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSY 68

Query: 298 LTGEFPGDYGWDTA 339
           LTGEFPGDYGWDTA
Sbjct: 69  LTGEFPGDYGWDTA 82

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  108 bits (269), Expect = 4e-24
 Identities = 48/56 (85%), Positives = 49/56 (87%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           GEGRITMRKTAGKPK   SSSPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 29  GEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  107 bits (267), Expect = 7e-24
 Identities = 50/58 (86%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
 Frame = +1

Query: 169 FGEGRITMRKTAGKPKVAASS-SPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           FGE R+TMRKTA K K AASS SPWYG DRVLYLGPLSG+PPSYLTGEFPGDYGWDTA
Sbjct: 25  FGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTA 82

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  107 bits (266), Expect = 1e-23
 Identities = 49/61 (80%), Positives = 53/61 (86%), Gaps = 1/61 (1%)
 Frame = +1

Query: 160 AAPFGEGRITMRKTAGKPK-VAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 336
           ++ FGE R+TMRKTA K K  AAS SPWYG DRVLYLGPLSG+PPSYLTGEFPGDYGWDT
Sbjct: 22  SSSFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 81

Query: 337 A 339
           A
Sbjct: 82  A 82

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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  106 bits (265), Expect = 1e-23
 Identities = 47/60 (78%), Positives = 52/60 (86%)
 Frame = +1

Query: 160 AAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           +A  G+ R+ MRKTA K K  +SSSPWYGSDRVLYLGPLSG+PPSYLTGEFPGDYGWDTA
Sbjct: 24  SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTA 83

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  100 bits (250), Expect = 7e-22
 Identities = 50/70 (71%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
 Frame = +1

Query: 136 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 309
           G  VK S AA    G GR+TMRKT  KPK   S SPWYGSDRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSPAASEVLGSGRVTMRKTVAKPK-GPSGSPWYGSDRVKYLGPFSGESPSYLTGE 73

Query: 310 FPGDYGWDTA 339
           FPGDYGWDTA
Sbjct: 74  FPGDYGWDTA 83

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  100 bits (250), Expect = 7e-22
 Identities = 46/57 (80%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAAS-SSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           GE R+TMRK  GK  VAAS  SPWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDTA
Sbjct: 39  GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTA 95

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 44/56 (78%), Positives = 47/56 (83%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G GR+TMRKTA K K A+S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 29  GNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 49/70 (70%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
 Frame = +1

Query: 136 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 309
           G  VK S +AP   G GR++MRKT  KP   ASSSPWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 310 FPGDYGWDTA 339
           FPGDYGWDTA
Sbjct: 73  FPGDYGWDTA 82

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 49/70 (70%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
 Frame = +1

Query: 136 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 309
           G  V  S AA    G GR+TMRKT  KPK   S SPWYGSDRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVNLSPAASEVLGSGRVTMRKTVAKPK-GPSGSPWYGSDRVKYLGPFSGESPSYLTGE 73

Query: 310 FPGDYGWDTA 339
           FPGDYGWDTA
Sbjct: 74  FPGDYGWDTA 83

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 44/57 (77%), Positives = 48/57 (84%), Gaps = 1/57 (1%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAAS-SSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           GE R+TMRK  G+  VAAS  SPWYG DRV+YLGP SG+PPSYLTGEFPGDYGWDTA
Sbjct: 39  GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTA 95

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 98.6 bits (244), Expect = 3e-21
 Identities = 42/56 (75%), Positives = 46/56 (82%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G G++TMRKTA K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 29  GNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 97.8 bits (242), Expect = 6e-21
 Identities = 42/56 (75%), Positives = 46/56 (82%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G G++TMRKTA K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 28  GNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 83

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 97.8 bits (242), Expect = 6e-21
 Identities = 42/56 (75%), Positives = 46/56 (82%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G G++TMRKTA K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 28  GNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 83

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 97.8 bits (242), Expect = 6e-21
 Identities = 50/70 (71%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
 Frame = +1

Query: 136 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 309
           G  VK S  A   FG GR+TMRKT  KP    S SPWYGSDRV YLGP SG+PPSYLTGE
Sbjct: 15  GKAVKLSPGASEVFGTGRVTMRKTV-KP-TGPSGSPWYGSDRVKYLGPFSGEPPSYLTGE 72

Query: 310 FPGDYGWDTA 339
           FPGDYGWDTA
Sbjct: 73  FPGDYGWDTA 82

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 42/56 (75%), Positives = 47/56 (83%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G G++TMRKTA K K  +SSSPWYG +RV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 29  GNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 45/61 (73%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
 Frame = +1

Query: 160 AAPFGEGRITMRK-TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 336
           A   GE R+TMRK T  K   +AS+SPWYG DRVLYLGP SG+PPSYLTGEFPGDYGWDT
Sbjct: 31  AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90

Query: 337 A 339
           A
Sbjct: 91  A 91

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 46/70 (65%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
 Frame = +1

Query: 136 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 309
           G  VK S ++    G G++TMRKT  K K A+SSSPWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 310 FPGDYGWDTA 339
           FP DYGWDTA
Sbjct: 75  FPSDYGWDTA 84

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 95.9 bits (237), Expect = 2e-20
 Identities = 46/71 (64%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
 Frame = +1

Query: 136 GTPVKASR---AAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTG 306
           G PV+ S    +   G  R TMRK+A   KVA+S SPWYG DRV YLGP SG+ PSYLTG
Sbjct: 15  GKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTG 74

Query: 307 EFPGDYGWDTA 339
           EFPGDYGWDTA
Sbjct: 75  EFPGDYGWDTA 85

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 42/56 (75%), Positives = 45/56 (80%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G G+ TMRKTA K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 29  GNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 84

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 41/56 (73%), Positives = 45/56 (80%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G G++TMRKT  K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 29  GNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 84

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 94.7 bits (234), Expect = 5e-20
 Identities = 45/64 (70%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
 Frame = +1

Query: 151 ASRAAP-FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 327
           AS + P  G GR++MRKTA K    +S SPWYG DRV YLGP SG+PPSYLTGEFPGDYG
Sbjct: 1   ASPSTPQLGVGRVSMRKTASK--TVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYG 58

Query: 328 WDTA 339
           WDTA
Sbjct: 59  WDTA 62

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 94.4 bits (233), Expect = 6e-20
 Identities = 42/56 (75%), Positives = 45/56 (80%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G  R TMRK+A   KVA+S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 31  GAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 86

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 94.0 bits (232), Expect = 8e-20
 Identities = 41/56 (73%), Positives = 44/56 (78%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G G+ TMRKT  K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 29  GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 84

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 94.0 bits (232), Expect = 8e-20
 Identities = 47/70 (67%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
 Frame = +1

Query: 136 GTPVKASRAAPF--GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 309
           G  VK S  AP   G  + TMRKTA K    +S SPWYG DRV YLGP SG+PPSYLTGE
Sbjct: 5   GQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62

Query: 310 FPGDYGWDTA 339
           FPGDYGWDTA
Sbjct: 63  FPGDYGWDTA 72

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 94.0 bits (232), Expect = 8e-20
 Identities = 41/56 (73%), Positives = 44/56 (78%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G G+ TMRKT  K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 28  GNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 83

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 40/54 (74%), Positives = 44/54 (81%)
 Frame = +1

Query: 178 GRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G++TMRKT  K K  +S SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 30  GKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTA 83

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 48/70 (68%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
 Frame = +1

Query: 136 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 309
           G  VK S +A    G GRITMRK   K   A SSSPWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GQAVKLSPSASEISGNGRITMRKAVAKS--APSSSPWYGPDRVKYLGPFSGESPSYLTGE 72

Query: 310 FPGDYGWDTA 339
           FPGDYGWDTA
Sbjct: 73  FPGDYGWDTA 82

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 45/69 (65%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
 Frame = +1

Query: 148 KASRAAP-----FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEF 312
           KA + AP     FG GR++MRKT   P    S SPWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 16  KAVKVAPSSSELFGNGRVSMRKTVKAP---VSDSPWYGPDRVKYLGPFSGEAPSYLTGEF 72

Query: 313 PGDYGWDTA 339
           PGDYGWDTA
Sbjct: 73  PGDYGWDTA 81

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 45/68 (66%), Positives = 50/68 (73%)
 Frame = +1

Query: 136 GTPVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 315
           G  VK   +AP   GR++MRKT  K    +S SPWYG DRV YLGP SG+PPSYLTGEFP
Sbjct: 16  GKAVKLGPSAP-EVGRVSMRKTVTKQ--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFP 72

Query: 316 GDYGWDTA 339
           GDYGWDTA
Sbjct: 73  GDYGWDTA 80

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 44/70 (62%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
 Frame = +1

Query: 136 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGE 309
           G  VK S ++    G G+  MRKT  K K  +S SPWYG DRV YLGP SG+ PSYLTGE
Sbjct: 15  GNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74

Query: 310 FPGDYGWDTA 339
           FPGDYGWDTA
Sbjct: 75  FPGDYGWDTA 84

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 88.6 bits (218), Expect = 4e-18
 Identities = 40/56 (71%), Positives = 44/56 (78%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G+ R++MRKTA   KV    SPWYG DRV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 29  GDARVSMRKTAATKKVG---SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTA 81

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 82.4 bits (202), Expect = 3e-16
 Identities = 40/62 (64%), Positives = 42/62 (67%)
 Frame = +1

Query: 154 SRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 333
           SR    GE R+ M     K   A S S WYGSDR LYLGP SG PPSYL+GEFPGDYGWD
Sbjct: 24  SRKVGAGEARVQMMAPKSK---APSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWD 80

Query: 334 TA 339
           TA
Sbjct: 81  TA 82

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 39/57 (68%), Positives = 41/57 (71%)
 Frame = +1

Query: 169 FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           FGEGRITMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA
Sbjct: 30  FGEGRITMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTA 82

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +1

Query: 214 KVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           KVA+SSSPW+G D V YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 4   KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTA 45

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 77.0 bits (188), Expect = 1e-14
 Identities = 37/57 (64%), Positives = 39/57 (68%)
 Frame = +1

Query: 169 FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           FG GR TMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA
Sbjct: 30  FGGGRATMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTA 82

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 36/57 (63%), Positives = 39/57 (68%)
 Frame = +1

Query: 169 FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           F  GR+TMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA
Sbjct: 2   FEGGRVTMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTA 54

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 34/55 (61%), Positives = 40/55 (72%)
 Frame = +1

Query: 175 EGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           E R+TMR+T  K   A S + WYG+DR  +LGP SG+ PSYL GEF GDYGWDTA
Sbjct: 33  EARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTA 85

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 36/57 (63%), Positives = 39/57 (68%)
 Frame = +1

Query: 169 FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           FG+ R TMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA
Sbjct: 30  FGQARFTMRRTVK----SAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTA 82

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 36/54 (66%), Positives = 38/54 (70%)
 Frame = +1

Query: 178 GRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           GRITMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA
Sbjct: 31  GRITMRRTVK----SAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTA 80

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 36/57 (63%), Positives = 38/57 (66%)
 Frame = +1

Query: 169 FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           F  GR TMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA
Sbjct: 30  FNGGRATMRRTVK----SAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTA 82

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 74.3 bits (181), Expect = 7e-14
 Identities = 36/56 (64%), Positives = 39/56 (69%)
 Frame = +1

Query: 175 EGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTAA 342
           + RITMR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDTAA
Sbjct: 33  QARITMRRTVR----SAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAA 84

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 74.3 bits (181), Expect = 7e-14
 Identities = 37/62 (59%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
 Frame = +1

Query: 136 GTPVKASRAAP-FGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEF 312
           G  +K + + P  G GR++MRKTA  PK  +S SPWYG DRV YLGP SG+ PSYLTGEF
Sbjct: 15  GQAMKLAPSTPELGVGRVSMRKTA--PKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 72

Query: 313 PG 318
            G
Sbjct: 73  HG 74

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 74.3 bits (181), Expect = 7e-14
 Identities = 35/56 (62%), Positives = 40/56 (71%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G GR++MR+T      +A +S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA
Sbjct: 31  GGGRVSMRRTVK----SAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTA 82

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 34/54 (62%), Positives = 38/54 (70%)
 Frame = +1

Query: 178 GRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           GR++MR+T      +A  S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA
Sbjct: 32  GRVSMRRTIK----SAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTA 81

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 71.6 bits (174), Expect = 4e-13
 Identities = 34/61 (55%), Positives = 39/61 (63%)
 Frame = +1

Query: 157 RAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDT 336
           R     +GR +MR+T      A   S WYG+DR  +LGP S   PSYLTGEFPGDYGWDT
Sbjct: 25  RKVGVSDGRFSMRRTVK----AVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDT 80

Query: 337 A 339
           A
Sbjct: 81  A 81

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 29/45 (64%), Positives = 31/45 (68%)
 Frame = +1

Query: 205 GKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G  +   S+  WYG DRV YLGP S   PSYL GEFPGDYGWDTA
Sbjct: 36  GSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTA 80

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 67.4 bits (163), Expect = 8e-12
 Identities = 37/75 (49%), Positives = 41/75 (54%), Gaps = 12/75 (16%)
 Frame = +1

Query: 151 ASRAA----PF--GEGRITMRK------TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPS 294
           ASRA     PF  G+GR            A   ++   +  WYG DRV YLGP S   PS
Sbjct: 9   ASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPS 68

Query: 295 YLTGEFPGDYGWDTA 339
           YL GEFPGDYGWDTA
Sbjct: 69  YLNGEFPGDYGWDTA 83

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 33/51 (64%), Positives = 37/51 (72%)
 Frame = +1

Query: 187 TMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           TM K A K KV++S+       RV YLGP SG+ PSYLTGEFPGDYGWDTA
Sbjct: 40  TMLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDTA 86

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 64.3 bits (155), Expect = 7e-11
 Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
 Frame = +1

Query: 193 RKTAGKPKVAASSSP-----WYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           +K AG  +  A+ +      WYG DR  +LGP S + P+YLTGEFPGDYGWDTA
Sbjct: 19  KKAAGTKQTKAAPAKSAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTA 72

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
 Frame = +1

Query: 151 ASRAAPFGEGRITMRKTAGKPKVAASSS-PWYGSDRVLYLGPLSGDP-PSYLTGEFPGDY 324
           ASR A     + T +KTA K     SS   +YG +R  +LGP S +  P+YLTGEFPGDY
Sbjct: 6   ASRKALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDY 65

Query: 325 GWDTA 339
           GWDTA
Sbjct: 66  GWDTA 70

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
 Frame = +1

Query: 217 VAASSSPWYGSDRVLYLGPLS-GDPPSYLTGEFPGDYGWDTA 339
           V  ++  +YG DR  +LGP S  D P YLTGEFPGDYGWDTA
Sbjct: 26  VPRAAVEFYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTA 67

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = +1

Query: 271 PLSGDPPSYLTGEFPGDYGWDTA 339
           P SG+PPSYLTGEFPGDYGWDTA
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTA 23

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>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPW 240
           G GRITMRKTA KPK A+S SPW
Sbjct: 29  GNGRITMRKTAAKPKPASSGSPW 51

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>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 18/23 (78%), Positives = 19/23 (82%)
 Frame = +1

Query: 172 GEGRITMRKTAGKPKVAASSSPW 240
           G GRITMRKTA KPK A+S SPW
Sbjct: 29  GNGRITMRKTAAKPKPASSGSPW 51

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +1

Query: 178 GRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWDTA 339
           G+ T +      K ++S++ +YG D       L    P   TGEFPGDYGWDTA
Sbjct: 37  GKSTKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTA 89

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +1

Query: 139 TPVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYL--GPLS-GDPPSYLTGE 309
           +P      A F + +    K+    + +   + WYG DR ++L  G L   + P YL GE
Sbjct: 29  SPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGE 88

Query: 310 FPGDYGWD 333
             GDYG+D
Sbjct: 89  VAGDYGYD 96

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = +1

Query: 136 GTPVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFP 315
           G+ V  ++A+  G  R+ + K +  P   ++++    +D    L      PP +L G  P
Sbjct: 24  GSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLP 83

Query: 316 GDYGWD 333
           GD+G+D
Sbjct: 84  GDFGFD 89

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 31.2 bits (69), Expect = 0.67
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
 Frame = +1

Query: 136 GTPVKASRAAPFGEGRITMRK---TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTG 306
           G+ V A++A+  G  R+ + K     G   VA S+      DR L+       PP +L G
Sbjct: 24  GSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVA-ADPDRPLWFP--GSTPPEWLDG 80

Query: 307 EFPGDYGWD 333
             PGD+G+D
Sbjct: 81  SLPGDFGFD 89

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = +1

Query: 145 VKASRAAPF---GEGRITMRKTAGKPKVAA--SSSPWYGSDRVL-YLGPLSGDPPSYLTG 306
           +  +R AP    G GR T     GK K A   S+     +DR L Y G +S   P +L G
Sbjct: 14  IMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAIS---PDWLDG 70

Query: 307 EFPGDYGWD 333
              GDYG+D
Sbjct: 71  SLVGDYGFD 79

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>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 136 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPW 240
           G  VK S +A    G GRITMRK   K   A SSSPW
Sbjct: 15  GQAVKLSPSASEISGNGRITMRKAVAKS--APSSSPW 49

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>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 136 GTPVKASRAAP--FGEGRITMRKTAGKPKVAASSSPW 240
           G  VK S +A    G GRITMRK   K   A SSSPW
Sbjct: 15  GQAVKLSPSASENSGNGRITMRKAVAKS--APSSSPW 49

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = +1

Query: 208 KPKVAASSSPWYGSDRVLYLGPLSGD------PPSYLTGEFPGDYGWDT 336
           K K AA+   + G+   +    +S D       PSYL G  PGD+G+D+
Sbjct: 23  KSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDS 71

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>O11H6_HUMAN (Q8NGC7) Olfactory receptor 11H6 (Olfactory receptor OR14-35)|
          Length = 330

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 145 VKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDP 288
           ++A    P G GR     T G   +  S   +YG+  V+Y+ P SG+P
Sbjct: 240 IRAVLCIPSGAGRTKAFSTCGSHLMVVSL--FYGTLMVMYVSPTSGNP 285

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +1

Query: 286 PPSYLTGEFPGDYGWD 333
           PP++LTGE+P D G+D
Sbjct: 168 PPAHLTGEYPADRGFD 183

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +1

Query: 181 RITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 333
           R T R   G  K +   +    SDR L+        P YL G   GDYG+D
Sbjct: 28  RFTARFGFGTKKASPKKAKTVISDRPLWFP--GAKSPEYLDGSLVGDYGFD 76

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 277 SGDPPSYLTGEFPGDYGWD 333
           + +PP+ LTGE+P D G+D
Sbjct: 193 NAEPPALLTGEYPADRGFD 211



 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +1

Query: 286 PPSYLTGEFPGDYGWDTA 339
           PP YLTGE  GD G+D A
Sbjct: 380 PPRYLTGEAYGDKGFDPA 397

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>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 354

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 199 TAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 327
           TA   ++A    PW+G ++   L    G P  +  G FPG  G
Sbjct: 112 TAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154

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>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor|
          Length = 1901

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = +3

Query: 90   DGGRGDHGALLPGDGRHPGEGLQGGA 167
            DGG    GA +PGDG   G G  GGA
Sbjct: 1292 DGGNAGFGAGVPGDGGIGGTGGAGGA 1317



 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 90   DGGRGDHGAL-LPGDGRHPGEGLQGG 164
            DGG GD GAL   G+G   G+G QGG
Sbjct: 1623 DGGAGDSGALSQDGNGFAGGQGGQGG 1648



 Score = 27.7 bits (60), Expect = 7.4
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 90   DGGRGDHGAL-LPGDGRHPGEGLQGG 164
            DGG GD GAL   G+G   G+G QGG
Sbjct: 1418 DGGAGDSGALSQDGNGFAGGQGGQGG 1443

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>GLNA_SUIBO (Q8J1R3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 354

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 217 VAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 327
           +A  S PW+G ++   L    G P  +  G FPG  G
Sbjct: 118 LAKDSVPWFGLEQEYTLFDADGTPFGWPKGGFPGPQG 154

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +1

Query: 193 RKTAGKPKVAASSSPWYGSDRVLYLGPLSGDPPSYLTGEFPGDYGWD 333
           RK +   + A++     G++R L+    S    SYL G  PGD+G+D
Sbjct: 33  RKASFVVRAASTPPVKQGANRQLWFA--SKQSLSYLDGRLPGDFGFD 77

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>GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 358

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 235 PWYGSDRVLYLGPLSGDPPSYLTGEFPGDYG 327
           PW+G ++   L  L G+P  +  G FPG  G
Sbjct: 128 PWFGLEQEYTLFDLYGNPYGWPKGGFPGPQG 158

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>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington|
           disease gene regulatory region-binding protein 1)
           (HDBP-1)
          Length = 387

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
 Frame = +1

Query: 142 PVKASRAAPFGEGRITMRKTAGKPKVAASSSPWYGSDRVLYLGPLSG----------DPP 291
           PV A RA P G+ R+     A     + S+SP      V    P  G           P 
Sbjct: 89  PVPAQRATP-GKARLD-EVMAAAALTSLSTSPLLLGAPVAAFSPEPGLEPWKEALVRPPG 146

Query: 292 SYLTGEFPGDYGWDTAA 342
           SY +    GD+GWD A+
Sbjct: 147 SYSSSSNSGDWGWDLAS 163

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>PROB_SILPO (Q5LRY5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 368

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3

Query: 90  DGGRGDHGALLPGDGRHPGEGL 155
           D GRGD  A+L  DGR  G+GL
Sbjct: 308 DFGRGDPVAILGPDGRRLGQGL 329

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>HUR_STRAU (Q00923) Hydroxyurea phosphotransferase (EC 2.7.-.-) (Hydroxyurea|
           resistance protein)
          Length = 340

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 25/89 (28%), Positives = 31/89 (34%), Gaps = 24/89 (26%)
 Frame = +1

Query: 136 GTPVKASRAAPFGEGRITMRKTAGKPKVAA-------------------SSSPWYGSDRV 258
           G P  A R A  GE R+     A   +VAA                      PW   D  
Sbjct: 201 GVPEAAGRLADAGERRLLRDCAAALAEVAAEPGDRLLHWDLHFGNVLAGEREPWLAIDP- 259

Query: 259 LYLGPLSGDP-----PSYLTGEFPGDYGW 330
               PL+GDP     P+ + G   G+ GW
Sbjct: 260 ---KPLAGDPGFELLPALVNGFRAGEVGW 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,498,705
Number of Sequences: 219361
Number of extensions: 459511
Number of successful extensions: 1856
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result