ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GDA1_ASPFU (Q8TGG8) Probable guanosine-diphosphatase (EC 3.6.1.4... 28 4.4
2IFNG_TURTR (Q9TV67) Interferon gamma precursor (IFN-gamma) 28 4.4
3KINH_NEUCR (P48467) Kinesin heavy chain 27 9.8

>GDA1_ASPFU (Q8TGG8) Probable guanosine-diphosphatase (EC 3.6.1.42) (GDPase)|
          Length = 503

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 178 QEPRRVSNGAIIAAMLLSLCVLSIVKARYCSTPFGKP 288
           Q  R +  GAI+AA+LL L  +S  +  + S P G+P
Sbjct: 5   QRSRYLKTGAIVAALLLMLLWISPSRPMHPSFPQGQP 41



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>IFNG_TURTR (Q9TV67) Interferon gamma precursor (IFN-gamma)|
          Length = 166

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 220 MLLSLCVLSIVKARYCSTPFGKPDDQLKEQMNSS 321
           +   LCV+      YC  PF K    LKE  N+S
Sbjct: 8   LAFQLCVILGSSGSYCQAPFFKEIQNLKEYFNAS 41



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>KINH_NEUCR (P48467) Kinesin heavy chain|
          Length = 928

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +1

Query: 13  EKSLPPWEEAGRQQAKPSKQARELTPCRLLPQ 108
           EK +PP E A       S  AR  TP RLLP+
Sbjct: 382 EKWVPPLELAITPSKSASTTARPSTPSRLLPE 413


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,939,403
Number of Sequences: 219361
Number of extensions: 309444
Number of successful extensions: 1004
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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