ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464042.1| Oryza sativa (japonica cultivar-group), mRNA 252 6e-64
2ref|XM_464043.2| Oryza sativa (japonica cultivar-group), mRNA 252 6e-64
3dbj|AK119583.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 6e-64
4dbj|AK065605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 6e-64
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 204 1e-49
6dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic D... 204 1e-49
7dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic D... 204 1e-49
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
9dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
10dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
11dbj|AK071568.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
12dbj|AK059411.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 5e-09
13gb|AY022489.1| Oryza sativa microsatellite MRG4814 containing (A... 68 2e-08
14ref|NM_183840.1| Oryza sativa (japonica cultivar-group), predic... 44 0.28
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
16dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
17emb|BX511271.14| Zebrafish DNA sequence from clone DKEY-237E17 i... 42 1.1
18gb|AC152453.4| Mus musculus BAC clone RP24-238B3 from chromosome... 42 1.1
19emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in... 42 1.1
20gb|AC112790.5| Mus musculus BAC clone RP23-160A1 from 10, comple... 42 1.1
21gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 4.3
22gb|AC161521.16| Mus musculus chromosome 19, clone RP24-124P14, c... 40 4.3
23gb|AE017128.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 4.3
24ref|XM_582532.2| PREDICTED: Bos taurus similar to KIAA1737 prote... 40 4.3
25gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 4.3
26ref|XM_656003.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 4.3
27gb|AE009952.1| Yersinia pestis KIM, complete genome 40 4.3
28gb|AC115410.4| Rattus norvegicus 2 BAC CH230-46P5 (Children's Ho... 40 4.3
29gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome... 40 4.3
30gb|AC127549.3| Mus musculus BAC clone RP24-510G5 from chromosome... 40 4.3
31gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 4.3
32emb|AL354948.7| Human DNA sequence from clone RP11-378F20 on chr... 40 4.3
33emb|AL121796.17|HSDJ368B9 Human DNA sequence from clone RP3-368B... 40 4.3
34emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp... 40 4.3
35emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC... 40 4.3
36emb|AJ414142.1| Yersinia pestis strain CO92 complete genome; seg... 40 4.3
37dbj|AK127573.1| Homo sapiens cDNA FLJ45667 fis, clone CTONG3002518 40 4.3
38gb|AF274314.1|AF274314 Ustilago maydis Hgl1p (hgl1) gene, comple... 40 4.3
39gb|AC023511.17| Homo sapiens 12 BAC RP11-776A13 (Roswell Park Ca... 40 4.3
40gb|AC162923.2| Mus musculus BAC clone RP23-304O17 from chromosom... 40 4.3
41gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.3
42gb|AC157947.2| Mus musculus BAC clone RP23-238L21 from chromosom... 40 4.3
43gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome... 40 4.3
44gb|AC005258.2|AC005258 Homo sapiens chromosome 19, cosmid R30783... 40 4.3
45gb|AC068811.8|AC068811 Homo sapiens chromosome 12 clone RP11-17F... 40 4.3
46gb|AC154868.3| Monodelphis domestica, clone XX-211C4, complete s... 40 4.3
47gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 40 4.3
48gb|AC119998.13| Mus musculus chromosome 17, clone RP24-128A6, co... 40 4.3
49gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 4.3
50emb|AL845534.7| Mouse DNA sequence from clone RP23-223C17 on chr... 40 4.3
51gb|AC133097.3| Mus musculus BAC clone RP23-287O2 from 1, complet... 40 4.3 
>ref|XM_464042.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1955

 Score =  252 bits (127), Expect = 6e-64
 Identities = 154/163 (94%)
 Strand = Plus / Plus

                                                                       
Query: 167 tgcggagccggcaggagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcc 226
           |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |
Sbjct: 195 tgcggagccggcaggagccgcggcgggtgagcaacggcgtcatcatcgccgccatgctgc 254

                                                                       
Query: 227 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcggcaagc 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 255 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcgttaagc 314

                                                      
Query: 287 cggacgaccagctcaaggagcagatgaactccagcatccggat 329
           | |||||||||||  ||||||||||||||||||||||| ||||
Sbjct: 315 ccgacgaccagctacaggagcagatgaactccagcatcaggat 357
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>ref|XM_464043.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1965

 Score =  252 bits (127), Expect = 6e-64
 Identities = 154/163 (94%)
 Strand = Plus / Plus

                                                                       
Query: 167 tgcggagccggcaggagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcc 226
           |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |
Sbjct: 196 tgcggagccggcaggagccgcggcgggtgagcaacggcgtcatcatcgccgccatgctgc 255

                                                                       
Query: 227 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcggcaagc 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 256 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcgttaagc 315

                                                      
Query: 287 cggacgaccagctcaaggagcagatgaactccagcatccggat 329
           | |||||||||||  ||||||||||||||||||||||| ||||
Sbjct: 316 ccgacgaccagctacaggagcagatgaactccagcatcaggat 358
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>dbj|AK119583.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-C05, full
           insert sequence
          Length = 1965

 Score =  252 bits (127), Expect = 6e-64
 Identities = 154/163 (94%)
 Strand = Plus / Plus

                                                                       
Query: 167 tgcggagccggcaggagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcc 226
           |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |
Sbjct: 196 tgcggagccggcaggagccgcggcgggtgagcaacggcgtcatcatcgccgccatgctgc 255

                                                                       
Query: 227 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcggcaagc 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 256 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcgttaagc 315

                                                      
Query: 287 cggacgaccagctcaaggagcagatgaactccagcatccggat 329
           | |||||||||||  ||||||||||||||||||||||| ||||
Sbjct: 316 ccgacgaccagctacaggagcagatgaactccagcatcaggat 358
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>dbj|AK065605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033I23, full
           insert sequence
          Length = 1955

 Score =  252 bits (127), Expect = 6e-64
 Identities = 154/163 (94%)
 Strand = Plus / Plus

                                                                       
Query: 167 tgcggagccggcaggagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcc 226
           |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |
Sbjct: 195 tgcggagccggcaggagccgcggcgggtgagcaacggcgtcatcatcgccgccatgctgc 254

                                                                       
Query: 227 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcggcaagc 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 255 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcgttaagc 314

                                                      
Query: 287 cggacgaccagctcaaggagcagatgaactccagcatccggat 329
           | |||||||||||  ||||||||||||||||||||||| ||||
Sbjct: 315 ccgacgaccagctacaggagcagatgaactccagcatcaggat 357
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  204 bits (103), Expect = 1e-49
 Identities = 112/115 (97%)
 Strand = Plus / Plus

                                                                           
Query: 167     tgcggagccggcaggagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcc 226
               |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |
Sbjct: 1872887 tgcggagccggcaggagccgcggcgggtgagcaacggcgtcatcatcgccgccatgctgc 1872946

                                                                      
Query: 227     tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcgg 281
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872947 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcgg 1873001



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                              
Query: 283     aagccggacgaccagctcaaggagcagatgaactccagcatccggat 329
               ||||| |||||||||||  ||||||||||||||||||||||| ||||
Sbjct: 1873102 aagcccgacgaccagctacaggagcagatgaactccagcatcaggat 1873148
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>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0081C13
          Length = 144624

 Score =  204 bits (103), Expect = 1e-49
 Identities = 112/115 (97%)
 Strand = Plus / Plus

                                                                         
Query: 167   tgcggagccggcaggagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcc 226
             |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |
Sbjct: 12448 tgcggagccggcaggagccgcggcgggtgagcaacggcgtcatcatcgccgccatgctgc 12507

                                                                    
Query: 227   tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcgg 281
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12508 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcgg 12562



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                            
Query: 283   aagccggacgaccagctcaaggagcagatgaactccagcatccggat 329
             ||||| |||||||||||  ||||||||||||||||||||||| ||||
Sbjct: 12663 aagcccgacgaccagctacaggagcagatgaactccagcatcaggat 12709
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>dbj|AP004799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0585B01
          Length = 133231

 Score =  204 bits (103), Expect = 1e-49
 Identities = 112/115 (97%)
 Strand = Plus / Plus

                                                                          
Query: 167    tgcggagccggcaggagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcc 226
              |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |
Sbjct: 109531 tgcggagccggcaggagccgcggcgggtgagcaacggcgtcatcatcgccgccatgctgc 109590

                                                                     
Query: 227    tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcgg 281
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109591 tctccctctgcgtcctcagcatcgtcaaggccagatactgctccacccccttcgg 109645



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                             
Query: 283    aagccggacgaccagctcaaggagcagatgaactccagcatccggat 329
              ||||| |||||||||||  ||||||||||||||||||||||| ||||
Sbjct: 109746 aagcccgacgaccagctacaggagcagatgaactccagcatcaggat 109792
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                            
Query: 181      gagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcctctccctctgcgtc 240
                |||||||||||| |  |||||| ||||||  ||  | |||||||||||||||||||||||
Sbjct: 29370285 gagccgcggcggatgggcaacgccgccatggtcatcaccatgctcctctccctctgcgtc 29370226

                                                       
Query: 241      ctcagcatcgtcaaggccagatactgctccacccccttc 279
                |||| |  | |||||||  | ||||||||||||||||||
Sbjct: 29370225 ctcacctacatcaaggctcgctactgctccacccccttc 29370187
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>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0621D05
          Length = 180250

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                         
Query: 181   gagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcctctccctctgcgtc 240
             |||||||||||| |  |||||| ||||||  ||  | |||||||||||||||||||||||
Sbjct: 81166 gagccgcggcggatgggcaacgccgccatggtcatcaccatgctcctctccctctgcgtc 81107

                                                    
Query: 241   ctcagcatcgtcaaggccagatactgctccacccccttc 279
             |||| |  | |||||||  | ||||||||||||||||||
Sbjct: 81106 ctcacctacatcaaggctcgctactgctccacccccttc 81068
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>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0018H04
          Length = 142053

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                          
Query: 181    gagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcctctccctctgcgtc 240
              |||||||||||| |  |||||| ||||||  ||  | |||||||||||||||||||||||
Sbjct: 133083 gagccgcggcggatgggcaacgccgccatggtcatcaccatgctcctctccctctgcgtc 133024

                                                     
Query: 241    ctcagcatcgtcaaggccagatactgctccacccccttc 279
              |||| |  | |||||||  | ||||||||||||||||||
Sbjct: 133023 ctcacctacatcaaggctcgctactgctccacccccttc 132985
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>dbj|AK071568.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023103D13, full
           insert sequence
          Length = 1696

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                       
Query: 181 gagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcctctccctctgcgtc 240
           |||||||||||| |  |||||| ||||||  ||  | |||||||||||||||||||||||
Sbjct: 109 gagccgcggcggatgggcaacgccgccatggtcatcaccatgctcctctccctctgcgtc 168

                                                  
Query: 241 ctcagcatcgtcaaggccagatactgctccacccccttc 279
           |||| |  | |||||||  | ||||||||||||||||||
Sbjct: 169 ctcacctacatcaaggctcgctactgctccacccccttc 207
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>dbj|AK059411.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-C09, full
           insert sequence
          Length = 1619

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                       
Query: 181 gagccgcggcgggtcagcaacggcgccatcatcgccgccatgctcctctccctctgcgtc 240
           |||||||||||| |  |||||| ||||||  ||  | |||||||||||||||||||||||
Sbjct: 118 gagccgcggcggatgggcaacgccgccatggtcatcaccatgctcctctccctctgcgtc 177

                                                  
Query: 241 ctcagcatcgtcaaggccagatactgctccacccccttc 279
           |||| |  | |||||||  | ||||||||||||||||||
Sbjct: 178 ctcacctacatcaaggctcgctactgctccacccccttc 216
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>gb|AY022489.1| Oryza sativa microsatellite MRG4814 containing (AGG)X11, closest to
           marker R1782, genomic sequence
          Length = 233

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 218 ccatgctcctctccctctgcgtcctcagcatcgtcaaggccagatactgctccaccccct 277
           ||||||||||||||||||||||||||| |  | |||||||  | ||||||||||||||||
Sbjct: 207 ccatgctcctctccctctgcgtcctcacctacatcaaggctcgctactgctccaccccct 148

             
Query: 278 tc 279
           ||
Sbjct: 147 tc 146
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>ref|NM_183840.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 336

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 36 ggaggcaggcaggcagcaagca 57
          ||||||||||||||||||||||
Sbjct: 26 ggaggcaggcaggcagcaagca 47
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 36       ggaggcaggcaggcagcaagca 57
                ||||||||||||||||||||||
Sbjct: 12648765 ggaggcaggcaggcagcaagca 12648786
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>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0554D10
          Length = 158723

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 36    ggaggcaggcaggcagcaagca 57
             ||||||||||||||||||||||
Sbjct: 15794 ggaggcaggcaggcagcaagca 15815
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>emb|BX511271.14| Zebrafish DNA sequence from clone DKEY-237E17 in linkage group 17,
             complete sequence
          Length = 37992

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 38    aggcaggcaggcagcaagcaa 58
             |||||||||||||||||||||
Sbjct: 13190 aggcaggcaggcagcaagcaa 13210
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>gb|AC152453.4| Mus musculus BAC clone RP24-238B3 from chromosome 10, complete sequence
          Length = 182371

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 38    aggcaggcaggcag-caagcaaagcccag 65
             |||||||||||||| ||||||||||||||
Sbjct: 35567 aggcaggcaggcaggcaagcaaagcccag 35539
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>emb|BX005258.11| Zebrafish DNA sequence from clone DKEY-77I24 in linkage group 17,
              complete sequence
          Length = 193078

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     aggcaggcaggcagcaagcaa 58
              |||||||||||||||||||||
Sbjct: 150156 aggcaggcaggcagcaagcaa 150136
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>gb|AC112790.5| Mus musculus BAC clone RP23-160A1 from 10, complete sequence
          Length = 211714

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                           
Query: 38     aggcaggcaggcag-caagcaaagcccag 65
              |||||||||||||| ||||||||||||||
Sbjct: 148453 aggcaggcaggcaggcaagcaaagcccag 148425
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 209     tcatcgccgccatgctcctc 228
               ||||||||||||||||||||
Sbjct: 3645832 tcatcgccgccatgctcctc 3645813



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 215     ccgccatgctcctctccctctgcg 238
               |||||||||||| |||||||||||
Sbjct: 1364127 ccgccatgctccgctccctctgcg 1364104
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>gb|AC161521.16| Mus musculus chromosome 19, clone RP24-124P14, complete sequence
          Length = 169497

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 54     agcaaagcccagcaagcaagcaag 77
              ||||||||| ||||||||||||||
Sbjct: 100936 agcaaagccaagcaagcaagcaag 100959
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>gb|AE017128.1| Yersinia pestis biovar Medievalis str. 91001 section 2 of 16 of the
              complete genome
          Length = 290803

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     gcaggcaggcagcaagcaaa 59
              ||||||||||||||||||||
Sbjct: 269570 gcaggcaggcagcaagcaaa 269551



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     gcaggcaggcagcaagcaaa 59
              ||||||||||||||||||||
Sbjct: 269448 gcaggcaggcagcaagcaaa 269429



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     gcaggcaggcagcaagcaaa 59
              ||||||||||||||||||||
Sbjct: 269326 gcaggcaggcagcaagcaaa 269307
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>ref|XM_582532.2| PREDICTED: Bos taurus similar to KIAA1737 protein (LOC506130), mRNA
          Length = 1197

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 291  cgaccagctcaaggagcaga 310
            ||||||||||||||||||||
Sbjct: 1047 cgaccagctcaaggagcaga 1066
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 209     tcatcgccgccatgctcctc 228
               ||||||||||||||||||||
Sbjct: 4559860 tcatcgccgccatgctcctc 4559841
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>ref|XM_656003.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3491.2), mRNA
          Length = 1554

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 208  atcatcgccgccatgctcctctcc 231
            ||||||||| ||||||||||||||
Sbjct: 1066 atcatcgccaccatgctcctctcc 1089
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     gcaggcaggcagcaagcaaa 59
              ||||||||||||||||||||
Sbjct: 704416 gcaggcaggcagcaagcaaa 704397



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     gcaggcaggcagcaagcaaa 59
              ||||||||||||||||||||
Sbjct: 704294 gcaggcaggcagcaagcaaa 704275
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>gb|AC115410.4| Rattus norvegicus 2 BAC CH230-46P5 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 232501

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 225    cctctccctctgcgtcctcagcat 248
              ||||| ||||||||||||||||||
Sbjct: 152052 cctctgcctctgcgtcctcagcat 152029
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>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete sequence
          Length = 186986

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gggaggaggcaggcaggcag 51
              ||||||||||||||||||||
Sbjct: 146153 gggaggaggcaggcaggcag 146172



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     gggaggaggcaggcaggcag 51
              ||||||||||||||||||||
Sbjct: 146060 gggaggaggcaggcaggcag 146079
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>gb|AC127549.3| Mus musculus BAC clone RP24-510G5 from chromosome 5, complete sequence
          Length = 152564

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    gggaggaggcaggcaggcag 51
             ||||||||||||||||||||
Sbjct: 80764 gggaggaggcaggcaggcag 80783
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 131    gcgcgctggggtcggcgtcg 150
              ||||||||||||||||||||
Sbjct: 350336 gcgcgctggggtcggcgtcg 350355
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>emb|AL354948.7| Human DNA sequence from clone RP11-378F20 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 175097

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ggaggcaggcaggcagcaag 55
             ||||||||||||||||||||
Sbjct: 84692 ggaggcaggcaggcagcaag 84673
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>emb|AL121796.17|HSDJ368B9 Human DNA sequence from clone RP3-368B9 on chromosome 4, complete
             sequence
          Length = 133066

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    cttgggaggaggcaggcaggcagc 52
             |||| |||||||||||||||||||
Sbjct: 54016 cttgtgaggaggcaggcaggcagc 54039
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>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence
          Length = 4744671

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     gcaggcaggcagcaagcaaa 59
              ||||||||||||||||||||
Sbjct: 500090 gcaggcaggcagcaagcaaa 500071



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     gcaggcaggcagcaagcaaa 59
              ||||||||||||||||||||
Sbjct: 499968 gcaggcaggcagcaagcaaa 499949
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>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11,
              DP09G08, DP35C12 of chromosome 5  of Podospora anserina
          Length = 322194

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     aaagcccagcaagcaagcaa 76
              ||||||||||||||||||||
Sbjct: 171986 aaagcccagcaagcaagcaa 172005
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>emb|AJ414142.1| Yersinia pestis strain CO92 complete genome; segment 2/20
          Length = 214050

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    gcaggcaggcagcaagcaaa 59
             ||||||||||||||||||||
Sbjct: 91223 gcaggcaggcagcaagcaaa 91204



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    gcaggcaggcagcaagcaaa 59
             ||||||||||||||||||||
Sbjct: 91101 gcaggcaggcagcaagcaaa 91082



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    gcaggcaggcagcaagcaaa 59
             ||||||||||||||||||||
Sbjct: 90979 gcaggcaggcagcaagcaaa 90960
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>dbj|AK127573.1| Homo sapiens cDNA FLJ45667 fis, clone CTONG3002518
          Length = 3070

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 28   ccttgggaggaggcaggcaggcag 51
            |||||||||||| |||||||||||
Sbjct: 1169 ccttgggaggagacaggcaggcag 1146
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>gb|AF274314.1|AF274314 Ustilago maydis Hgl1p (hgl1) gene, complete cds
          Length = 4835

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 50  agcaagcaaagcccagcaagcaag 73
           ||||||||||||| ||||||||||
Sbjct: 577 agcaagcaaagccaagcaagcaag 554
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>gb|AC023511.17| Homo sapiens 12 BAC RP11-776A13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 175631

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 49    cagcaagcaaagcccagcaagcaa 72
             ||||||| ||||||||||||||||
Sbjct: 68163 cagcaagtaaagcccagcaagcaa 68140
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>gb|AC162923.2| Mus musculus BAC clone RP23-304O17 from chromosome 17, complete sequence
          Length = 192669

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     aggcaggcaggcagcaagca 57
              ||||||||||||||||||||
Sbjct: 105914 aggcaggcaggcagcaagca 105895
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 204     cgccatcatcgccgccatgc 223
               ||||||||||||||||||||
Sbjct: 3369445 cgccatcatcgccgccatgc 3369426
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>gb|AC157947.2| Mus musculus BAC clone RP23-238L21 from chromosome 9, complete sequence
          Length = 174016

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    gggaggaggcaggcaggcag 51
             ||||||||||||||||||||
Sbjct: 92848 gggaggaggcaggcaggcag 92829
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>gb|AC140675.5| Mus musculus BAC clone RP23-44J10 from chromosome 5, complete
            sequence
          Length = 229269

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   gggaggaggcaggcaggcag 51
            ||||||||||||||||||||
Sbjct: 6680 gggaggaggcaggcaggcag 6699



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   gggaggaggcaggcaggcag 51
            ||||||||||||||||||||
Sbjct: 6587 gggaggaggcaggcaggcag 6606
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>gb|AC005258.2|AC005258 Homo sapiens chromosome 19, cosmid R30783 (LLNLR-269E7) and 3'
             overlapping PCR product, complete sequence
          Length = 42559

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 28    ccttgggaggaggcaggcaggcag 51
             |||||||||||| |||||||||||
Sbjct: 28229 ccttgggaggagacaggcaggcag 28206
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>gb|AC068811.8|AC068811 Homo sapiens chromosome 12 clone RP11-17F13, complete sequence
          Length = 157321

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 49     cagcaagcaaagcccagcaagcaa 72
              ||||||| ||||||||||||||||
Sbjct: 112602 cagcaagtaaagcccagcaagcaa 112625
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>gb|AC154868.3| Monodelphis domestica, clone XX-211C4, complete sequence
          Length = 129158

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    aggcaggcaggcagcaagca 57
             ||||||||||||||||||||
Sbjct: 42307 aggcaggcaggcagcaagca 42288
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 258     cagatactgctccaccccct 277
               ||||||||||||||||||||
Sbjct: 2019024 cagatactgctccaccccct 2019005
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>gb|AC119998.13| Mus musculus chromosome 17, clone RP24-128A6, complete sequence
          Length = 172124

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    gggaggaggcaggcaggcag 51
             ||||||||||||||||||||
Sbjct: 41014 gggaggaggcaggcaggcag 40995
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 195     cagcaacggcgccatcatcgccgc 218
               ||||||||||||| ||||||||||
Sbjct: 4236560 cagcaacggcgccgtcatcgccgc 4236583
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>emb|AL845534.7| Mouse DNA sequence from clone RP23-223C17 on chromosome 2, complete
              sequence
          Length = 191379

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     tgggaggaggcaggcaggca 50
              ||||||||||||||||||||
Sbjct: 138055 tgggaggaggcaggcaggca 138036
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>gb|AC133097.3| Mus musculus BAC clone RP23-287O2 from 1, complete sequence
          Length = 199276

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     gggaggaggcaggcaggcag 51
              ||||||||||||||||||||
Sbjct: 106658 gggaggaggcaggcaggcag 106639


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,130,400
Number of Sequences: 3902068
Number of extensions: 3130400
Number of successful extensions: 119520
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 118748
Number of HSP's gapped (non-prelim): 772
length of query: 329
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 307
effective length of database: 17,147,199,772
effective search space: 5264190330004
effective search space used: 5264190330004
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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