ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC011270.9| Homo sapiens chromosome 15, clone RP11-5O23, comp... 40 0.20
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 0.20
3dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 40 0.20
4gb|AC115122.4| Mus musculus BAC clone RP24-108L20 from chromosom... 38 0.78
5emb|AL355994.11| Human DNA sequence from clone RP11-5P18 on chro... 38 0.78
6emb|AL159997.14| Human DNA sequence from clone RP11-479K20 on ch... 38 0.78
7gb|AC147644.3| Gallus gallus BAC clone CH261-77K20 from chromoso... 38 0.78
8gb|AC148978.3| Mus musculus BAC clone RP23-359K8 from 14, comple... 38 0.78
9ref|XM_549825.1| Oryza sativa (japonica cultivar-group), mRNA 36 3.1
10gb|AF217621.1| Homo sapiens homeobox protein (HLX1) gene, comple... 36 3.1
11gb|AC007581.6| Drosophila melanogaster clone BACR03I24, complete... 36 3.1
12gb|AC092224.2| Drosophila melanogaster clone BACR17M04, complete... 36 3.1
13ref|XM_419241.1| PREDICTED: Gallus gallus similar to linear IgA ... 36 3.1
14ref|NM_001033601.1| Mus musculus RIKEN cDNA C130038G02 gene (C13... 36 3.1
15ref|NM_029920.4| Mus musculus RIKEN cDNA C130038G02 gene (C13003... 36 3.1
16gb|AC158301.4| Mus musculus chromosome 5, clone RP24-71D19, comp... 36 3.1
17ref|XM_987052.1| PREDICTED: Mus musculus RIKEN cDNA C130038G02 g... 36 3.1
18emb|CR384062.10| Zebrafish DNA sequence from clone DKEY-208K22 i... 36 3.1
19gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome... 36 3.1
20gb|AC124590.4| Mus musculus BAC clone RP23-133P12 from chromosom... 36 3.1
21emb|AL445423.13| Human DNA sequence from clone RP11-295M18 on ch... 36 3.1
22emb|AL139246.20| Human DNA sequence from clone RP3-395M20 on chr... 36 3.1
23gb|AC011840.7| Homo sapiens, clone RP11-218M11, complete sequence 36 3.1
24ref|NM_138105.1| Drosophila melanogaster CG13594-RA (CG13594), mRNA 36 3.1
25gb|AY075460.1| Drosophila melanogaster RE16208 full length cDNA 36 3.1
26dbj|AK147457.1| Mus musculus cDNA, RIKEN full-length enriched li... 36 3.1
27ref|XM_945957.1| PREDICTED: Homo sapiens similar to keratin 17, ... 36 3.1
28ref|XM_934895.1| PREDICTED: Homo sapiens similar to keratin 17, ... 36 3.1
29ref|XM_686313.1| PREDICTED: Danio rerio similar to CG15270-PA, i... 36 3.1
30dbj|AK042655.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 36 3.1
31gb|AC117725.23| Mus musculus chromosome 5, clone RP24-439K18, co... 36 3.1
32dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 36 3.1
33gb|AC007574.6|AC007574 Drosophila melanogaster, chromosome 2R, r... 36 3.1
34gb|AC008094.5|AC008094 Drosophila melanogaster, chromosome 3R, r... 36 3.1
35gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome ... 36 3.1
36gb|AC155293.3| Mus musculus BAC clone RP24-427L24 from chromosom... 36 3.1
37dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic D... 36 3.1
38dbj|AB093263.1| Mus musculus mRNA for mKIAA0774 protein 36 3.1
39ref|XM_557191.1| Anopheles gambiae str. PEST ENSANGP00000028796 ... 36 3.1
40dbj|AK102782.1| Oryza sativa (japonica cultivar-group) cDNA clon... 36 3.1
41gb|AC154719.2| Mus musculus BAC clone RP24-370O15 from 16, compl... 36 3.1
42gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15... 36 3.1
43gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53... 36 3.1
44gb|AE003464.2| Drosophila melanogaster chromosome 2R, section 71... 36 3.1
45gb|AC005562.1|AC005562 Homo sapiens chromosome 17, clone hRPK.27... 36 3.1
46gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, com... 36 3.1
47gb|AC129085.6| Mus musculus BAC clone RP23-293B11 from 13, compl... 36 3.1
48gb|AC154507.2| Mus musculus BAC clone RP24-95E21 from chromosome... 36 3.1
49gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, co... 36 3.1
50gb|AC123611.7| Mus musculus chromosome 15, clone RP23-345H23, co... 36 3.1
51dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic D... 36 3.1 
>gb|AC011270.9| Homo sapiens chromosome 15, clone RP11-5O23, complete sequence
          Length = 149762

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     cagccggagcagagcagagc 23
             ||||||||||||||||||||
Sbjct: 56285 cagccggagcagagcagagc 56266
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 1        cagcagccggagcagagcagagca 24
                ||||||||| ||||||||||||||
Sbjct: 19292620 cagcagccgcagcagagcagagca 19292597
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>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0458B05
          Length = 144917

 Score = 40.1 bits (20), Expect = 0.20
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     cagcagccggagcagagcagagca 24
             ||||||||| ||||||||||||||
Sbjct: 60418 cagcagccgcagcagagcagagca 60395
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>gb|AC115122.4| Mus musculus BAC clone RP24-108L20 from chromosome 14, complete sequence
          Length = 163480

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     gagcagagcagagcacgcg 28
              |||||||||||||||||||
Sbjct: 130302 gagcagagcagagcacgcg 130320
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>emb|AL355994.11| Human DNA sequence from clone RP11-5P18 on chromosome 1 Contains a
             novel pseudogene, the 5' end of the ZNF151 gene for zinc
             finger protein 151 (pHZ-67), a pseudogene similar to part
             of carboxypeptidase D (CPD), a ubiquitin specific protease
             6 (Tre-2 oncogene) (USP6) pseudogene, the gene for a novel
             protein (FLJ45517), a novel gene, the HSPB7 gene for heat
             shock 27kDa protein family member 7 (cardiovascular), the
             CLCNKA gene for chloride channel Ka, a pseudogene similar
             to part of novel protein FLJ36766, the CLCNKB gene for
             chloride channel Kb and the gene for a novel protein
             (FLJ36766), complete sequence
          Length = 109377

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     gccggagcagagcagagca 24
             |||||||||||||||||||
Sbjct: 74934 gccggagcagagcagagca 74916
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>emb|AL159997.14| Human DNA sequence from clone RP11-479K20 on chromosome 9q34.12-34.3
             Contains the 3' end of  the gene for netrin G2 protein
             (KIAA1857), gene KIAA0625 (FLJ10594) and a CpG island,
             complete sequence
          Length = 107076

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    agcagagcagagcacgcgc 29
             |||||||||||||||||||
Sbjct: 57313 agcagagcagagcacgcgc 57331
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>gb|AC147644.3| Gallus gallus BAC clone CH261-77K20 from chromosome unknown, complete
             sequence
          Length = 191888

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     agcagccggagcagagcag 20
             |||||||||||||||||||
Sbjct: 47870 agcagccggagcagagcag 47852
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>gb|AC148978.3| Mus musculus BAC clone RP23-359K8 from 14, complete sequence
          Length = 241799

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     gagcagagcagagcacgcg 28
              |||||||||||||||||||
Sbjct: 217283 gagcagagcagagcacgcg 217301
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>ref|XM_549825.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2143

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 10  gagcagagcagagcacgc 27
           ||||||||||||||||||
Sbjct: 144 gagcagagcagagcacgc 161
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>gb|AF217621.1| Homo sapiens homeobox protein (HLX1) gene, complete cds
          Length = 12648

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 7     ccggagcagagcagagca 24
             ||||||||||||||||||
Sbjct: 11752 ccggagcagagcagagca 11769
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>gb|AC007581.6| Drosophila melanogaster clone BACR03I24, complete sequence
          Length = 163517

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 3     gcagccggagcagagcag 20
             ||||||||||||||||||
Sbjct: 52710 gcagccggagcagagcag 52693
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>gb|AC092224.2| Drosophila melanogaster clone BACR17M04, complete sequence
          Length = 145213

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 3     gcagccggagcagagcagagca 24
             ||||||||||| ||||||||||
Sbjct: 87588 gcagccggagctgagcagagca 87567
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>ref|XM_419241.1| PREDICTED: Gallus gallus similar to linear IgA disease antigen
           homolog (LOC421160), mRNA
          Length = 1239

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 1   cagcagccggagcagagc 18
           ||||||||||||||||||
Sbjct: 541 cagcagccggagcagagc 558
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>ref|NM_001033601.1| Mus musculus RIKEN cDNA C130038G02 gene (C130038G02Rik), transcript
            variant 1, mRNA
          Length = 5560

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 3    gcagccggagcagagcag 20
            ||||||||||||||||||
Sbjct: 3504 gcagccggagcagagcag 3521
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>ref|NM_029920.4| Mus musculus RIKEN cDNA C130038G02 gene (C130038G02Rik), transcript
            variant 2, mRNA
          Length = 5560

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 3    gcagccggagcagagcag 20
            ||||||||||||||||||
Sbjct: 3504 gcagccggagcagagcag 3521
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>gb|AC158301.4| Mus musculus chromosome 5, clone RP24-71D19, complete sequence
          Length = 234479

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 3     gcagccggagcagagcag 20
             ||||||||||||||||||
Sbjct: 43593 gcagccggagcagagcag 43610
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>ref|XM_987052.1| PREDICTED: Mus musculus RIKEN cDNA C130038G02 gene (C130038G02Rik),
            mRNA
          Length = 6441

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 3    gcagccggagcagagcag 20
            ||||||||||||||||||
Sbjct: 2403 gcagccggagcagagcag 2420
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>emb|CR384062.10| Zebrafish DNA sequence from clone DKEY-208K22 in linkage group 2,
             complete sequence
          Length = 78000

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     cggagcagagcagagcac 25
             ||||||||||||||||||
Sbjct: 61439 cggagcagagcagagcac 61456
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>gb|AC125529.4| Mus musculus BAC clone RP23-366O3 from chromosome 17, complete sequence
          Length = 215469

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 7      ccggagcagagcagagca 24
              ||||||||||||||||||
Sbjct: 162927 ccggagcagagcagagca 162944
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>gb|AC124590.4| Mus musculus BAC clone RP23-133P12 from chromosome 6, complete sequence
          Length = 215946

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 3     gcagccggagcagagcag 20
             ||||||||||||||||||
Sbjct: 28581 gcagccggagcagagcag 28564
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>emb|AL445423.13| Human DNA sequence from clone RP11-295M18 on chromosome 1 Contains the
             3' end of a novel gene (FLJ22390), two novel genes, the
             HLX1 gene for H2.0-like homeo box 1 (Drosophila) and four
             CpG islands, complete sequence
          Length = 177941

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 7     ccggagcagagcagagca 24
             ||||||||||||||||||
Sbjct: 99483 ccggagcagagcagagca 99500
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>emb|AL139246.20| Human DNA sequence from clone RP3-395M20 on chromosome 1p36.11-36.33
             Contains two genes for novel proteins (KIAA0450, FLJ00417,
             FLJ00414, FLJ00222, MGC26818, FLJ32465, DKFZp547M123,
             FLJ37582, ), five novel genes (FLJ11705, FLJ46690), the
             PANK4 gene for pantothenate kinase 4, the gene for a novel
             protein (ortholog of rodent hairy and enhancer of split 5
             (Drosophila) (Hes5)), the TNFRSF14 gene for tumor necrosis
             factor receptor superfamily member 14 (herpesvirus entry
             mediator), the 3' end of the MMEL2 gene for membrane
             metallo-endopeptidase-like 2 and three CpG islands,
             complete sequence
          Length = 154736

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 17    gcagagcacgcgcacggg 34
             ||||||||||||||||||
Sbjct: 95385 gcagagcacgcgcacggg 95402
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>gb|AC011840.7| Homo sapiens, clone RP11-218M11, complete sequence
          Length = 105831

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 10    gagcagagcagagcacgcgcac 31
             ||||||||||||||| ||||||
Sbjct: 16657 gagcagagcagagcaggcgcac 16678
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>ref|NM_138105.1| Drosophila melanogaster CG13594-RA (CG13594), mRNA
          Length = 2897

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 3   gcagccggagcagagcag 20
           ||||||||||||||||||
Sbjct: 803 gcagccggagcagagcag 820
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>gb|AY075460.1| Drosophila melanogaster RE16208 full length cDNA
          Length = 2910

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 3   gcagccggagcagagcag 20
           ||||||||||||||||||
Sbjct: 802 gcagccggagcagagcag 819
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>dbj|AK147457.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:M5C1046C23 product:similar to Hypothetical
            glutamine-rich region containing protein [Mus musculus],
            full insert sequence
          Length = 5560

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 3    gcagccggagcagagcag 20
            ||||||||||||||||||
Sbjct: 3504 gcagccggagcagagcag 3521
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>ref|XM_945957.1| PREDICTED: Homo sapiens similar to keratin 17, transcript variant 3
           (LOC650517), mRNA
          Length = 938

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 10  gagcagagcagagcacgcgcac 31
           ||||||||||||||| ||||||
Sbjct: 846 gagcagagcagagcaggcgcac 867
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>ref|XM_934895.1| PREDICTED: Homo sapiens similar to keratin 17, transcript variant 3
           (LOC440421), mRNA
          Length = 938

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                 
Query: 10  gagcagagcagagcacgcgcac 31
           ||||||||||||||| ||||||
Sbjct: 846 gagcagagcagagcaggcgcac 867
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>ref|XM_686313.1| PREDICTED: Danio rerio similar to CG15270-PA, isoform A
           (LOC562947), mRNA
          Length = 3114

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 8   cggagcagagcagagcac 25
           ||||||||||||||||||
Sbjct: 542 cggagcagagcagagcac 559
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>dbj|AK042655.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:A730013O20 product:hypothetical
           protein, full insert sequence
          Length = 2559

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 3   gcagccggagcagagcag 20
           ||||||||||||||||||
Sbjct: 479 gcagccggagcagagcag 496
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>gb|AC117725.23| Mus musculus chromosome 5, clone RP24-439K18, complete sequence
          Length = 180960

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 3      gcagccggagcagagcag 20
              ||||||||||||||||||
Sbjct: 121491 gcagccggagcagagcag 121508
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 10     gagcagagcagagcacgc 27
              ||||||||||||||||||
Sbjct: 196789 gagcagagcagagcacgc 196806
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>gb|AC007574.6|AC007574 Drosophila melanogaster, chromosome 2R, region 60D-60D, BAC clone
              BACR11C07, complete sequence
          Length = 171151

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 3      gcagccggagcagagcag 20
              ||||||||||||||||||
Sbjct: 159759 gcagccggagcagagcag 159742
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>gb|AC008094.5|AC008094 Drosophila melanogaster, chromosome 3R, region 84F-84F, BAC clone
             BACR45A07, complete sequence
          Length = 170498

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 8     cggagcagagcagagcac 25
             ||||||||||||||||||
Sbjct: 33273 cggagcagagcagagcac 33256
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>gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome 13, complete sequence
          Length = 200650

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 7     ccggagcagagcagagca 24
             ||||||||||||||||||
Sbjct: 16521 ccggagcagagcagagca 16504
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>gb|AC155293.3| Mus musculus BAC clone RP24-427L24 from chromosome 12, complete
             sequence
          Length = 156472

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 11    agcagagcagagcacgcgcacg 32
             ||||||||||||||||| ||||
Sbjct: 27902 agcagagcagagcacgcccacg 27881
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>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436E04
          Length = 144644

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 10    gagcagagcagagcacgc 27
             ||||||||||||||||||
Sbjct: 38459 gagcagagcagagcacgc 38476
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>dbj|AB093263.1| Mus musculus mRNA for mKIAA0774 protein
          Length = 4442

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 3    gcagccggagcagagcag 20
            ||||||||||||||||||
Sbjct: 2378 gcagccggagcagagcag 2395
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>ref|XM_557191.1| Anopheles gambiae str. PEST ENSANGP00000028796
           (ENSANGG00000024059), partial mRNA
          Length = 885

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 3   gcagccggagcagagcag 20
           ||||||||||||||||||
Sbjct: 706 gcagccggagcagagcag 723
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>dbj|AK102782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107K12, full
           insert sequence
          Length = 2143

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 10  gagcagagcagagcacgc 27
           ||||||||||||||||||
Sbjct: 144 gagcagagcagagcacgc 161
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>gb|AC154719.2| Mus musculus BAC clone RP24-370O15 from 16, complete sequence
          Length = 163408

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 7     ccggagcagagcagagca 24
             ||||||||||||||||||
Sbjct: 71946 ccggagcagagcagagca 71929
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>gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15 of 118 of the complete
              sequence
          Length = 228314

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 8      cggagcagagcagagcac 25
              ||||||||||||||||||
Sbjct: 183531 cggagcagagcagagcac 183514
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>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete
              sequence
          Length = 263306

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 3      gcagccggagcagagcagagca 24
              ||||||||||| ||||||||||
Sbjct: 195056 gcagccggagctgagcagagca 195077
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>gb|AE003464.2| Drosophila melanogaster chromosome 2R, section 71 of 73 of the complete
              sequence
          Length = 310958

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 3      gcagccggagcagagcag 20
              ||||||||||||||||||
Sbjct: 247812 gcagccggagcagagcag 247795
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>gb|AC005562.1|AC005562 Homo sapiens chromosome 17, clone hRPK.271_K_11, complete sequence
          Length = 199182

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 10    gagcagagcagagcacgcgcac 31
             ||||||||||||||| ||||||
Sbjct: 44520 gagcagagcagagcaggcgcac 44499
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>gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, complete sequence
          Length = 231380

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 9     ggagcagagcagagcacg 26
             ||||||||||||||||||
Sbjct: 22913 ggagcagagcagagcacg 22896
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>gb|AC129085.6| Mus musculus BAC clone RP23-293B11 from 13, complete sequence
          Length = 206677

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 7      ccggagcagagcagagca 24
              ||||||||||||||||||
Sbjct: 178070 ccggagcagagcagagca 178053
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>gb|AC154507.2| Mus musculus BAC clone RP24-95E21 from chromosome 17, complete sequence
          Length = 189330

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 1     cagcagccggagcagagc 18
             ||||||||||||||||||
Sbjct: 67013 cagcagccggagcagagc 66996
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>gb|AC130656.11| Mus musculus chromosome 15, clone RP23-305M4, complete sequence
          Length = 185933

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 10     gagcagagcagagcacgcgcac 31
              |||||||||||| |||||||||
Sbjct: 158092 gagcagagcagaacacgcgcac 158071
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>gb|AC123611.7| Mus musculus chromosome 15, clone RP23-345H23, complete sequence
          Length = 209792

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                    
Query: 10     gagcagagcagagcacgcgcac 31
              |||||||||||| |||||||||
Sbjct: 186241 gagcagagcagaacacgcgcac 186262
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>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0455C04
          Length = 147940

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 10     gagcagagcagagcacgc 27
              ||||||||||||||||||
Sbjct: 145335 gagcagagcagagcacgc 145352


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 219,884
Number of Sequences: 3902068
Number of extensions: 219884
Number of successful extensions: 69785
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69615
Number of HSP's gapped (non-prelim): 170
length of query: 34
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 14
effective length of database: 17,155,003,908
effective search space: 240170054712
effective search space used: 240170054712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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