ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473183.1| Oryza sativa (japonica cultivar-group), predic... 46 0.024
2emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4,... 46 0.024
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.024
4gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.024
5dbj|AK101663.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.024
6gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.094
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.37
8dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 0.37
9dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.37
10emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 0.37
11ref|XM_465041.1| Oryza sativa (japonica cultivar-group), mRNA 40 1.5
12emb|AJ297636.1|CRA297636 Caulerpa racemosa 18S rRNA gene (partia... 40 1.5
13ref|NM_001007856.1| Xenopus tropicalis usf2 protein (usf2), mRNA 40 1.5
14gb|BC079958.1| Xenopus tropicalis usf2 protein, mRNA (cDNA clone... 40 1.5
15gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 1.5
16emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 40 1.5
17gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 1.5
18gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 1.5
19dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
20dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
21dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
22dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
23dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
24dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.5
25gb|AC113121.27| Mus musculus chromosome 8, clone RP23-347G12, co... 38 5.8
26ref|NM_188341.1| Oryza sativa (japonica cultivar-group), Ozsa809... 38 5.8
27ref|NM_196979.1| Oryza sativa (japonica cultivar-group) putative... 38 5.8
28ref|XM_478691.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.8
29ref|NM_184591.1| Oryza sativa (japonica cultivar-group), mRNA 38 5.8
30gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 38 5.8
31ref|XM_883389.1| PREDICTED: Bos taurus hypothetical protein LOC6... 38 5.8
32gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 38 5.8
33gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 38 5.8
34gb|DQ481079.1| Uncultured bacterium clone UT-075_27 membrane bou... 38 5.8
35gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 5.8
36gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8
37emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 38 5.8
38gb|BC072452.1| Homo sapiens family with sequence similarity 107,... 38 5.8
39gb|BC064407.1| Homo sapiens family with sequence similarity 107,... 38 5.8
40gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 38 5.8
41gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8
42emb|AL157706.17| Human DNA sequence from clone RP11-153L18 on ch... 38 5.8
43emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 38 5.8
44emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 38 5.8
45emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 38 5.8
46emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 38 5.8
47emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 38 5.8
48gb|AY665889.1| Physalis crassifolia isolate PCSF 18S ribosomal R... 38 5.8
49gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete se... 38 5.8
50emb|CR610285.1| full-length cDNA clone CS0DI054YN07 of Placenta ... 38 5.8
51dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, compl... 38 5.8
52gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 gen... 38 5.8
53gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 38 5.8
54gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 38 5.8
55gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 38 5.8
56emb|BX649633.13| Zebrafish DNA sequence from clone CH211-127A20 ... 38 5.8
57dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
58dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
59dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
60dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
61dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
62dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
63dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
64dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
65dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 38 5.8
66dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
67dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 38 5.8
68dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic D... 38 5.8
69dbj|AB095015.1| Terrabacter sp. DBF63 DNA, angular dioxygenase r... 38 5.8
70gb|AE005091.1| Halobacterium sp. NRC-1 section 122 of 170 of the... 38 5.8
71dbj|AK120618.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.8
72dbj|AK110190.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.8
73ref|NM_210644.1| Eremothecium gossypii AER435Wp (AER435W), mRNA 38 5.8
74dbj|AK067719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.8
75gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 38 5.8
76gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 38 5.8
77gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8
78gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 5.8 
>ref|XM_473183.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 528

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 73  ggtcgccgacggcgcccgcggcggcgc 99
           ||||||||||||||| |||||||||||
Sbjct: 129 ggtcgccgacggcgctcgcggcggcgc 155
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>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02,
             complete sequence
          Length = 139080

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 73    ggtcgccgacggcgcccgcggcggcgc 99
             ||||||||||||||| |||||||||||
Sbjct: 26696 ggtcgccgacggcgctcgcggcggcgc 26722
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 73       ggtcgccgacggcgcccgcggcggcgc 99
                ||||||||||||||| |||||||||||
Sbjct: 25809286 ggtcgccgacggcgctcgcggcggcgc 25809312



 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 38      gccgccggcgacgagggggaggc 60
               |||||||||||||||| ||||||
Sbjct: 5159558 gccgccggcgacgaggaggaggc 5159536
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 78      ccgacggcgcccgcggcggcgcc 100
               |||||||||||||||||||||||
Sbjct: 3008248 ccgacggcgcccgcggcggcgcc 3008226
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>dbj|AK101663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057M02, full
           insert sequence
          Length = 925

 Score = 46.1 bits (23), Expect = 0.024
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 73  ggtcgccgacggcgcccgcggcggcgc 99
           ||||||||||||||| |||||||||||
Sbjct: 191 ggtcgccgacggcgctcgcggcggcgc 217
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.094
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 72      gggtcgccgacggcgcccgcggcggc 97
               ||||||||||||||||||||| ||||
Sbjct: 2192775 gggtcgccgacggcgcccgcgtcggc 2192800



 Score = 42.1 bits (21), Expect = 0.37
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 74      gtcgccgacggcgcccgcggcggcg 98
               |||||||||||||||| ||||||||
Sbjct: 1761952 gtcgccgacggcgccctcggcggcg 1761928
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 77       gccgacggcgcccgcggcggcgcca 101
                |||||||||||| ||||||||||||
Sbjct: 28802294 gccgacggcgccagcggcggcgcca 28802270



 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 39       ccgccggcgacgagggggaggcag 62
                ||||||||||||||||| ||||||
Sbjct: 28531533 ccgccggcgacgaggggcaggcag 28531556



 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 79       cgacggcgcccgcggcggcg 98
                ||||||||||||||||||||
Sbjct: 19508975 cgacggcgcccgcggcggcg 19508994



 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 78      ccgacggcgcccgcggcggcgcc 100
               ||||||||| |||||||||||||
Sbjct: 2801914 ccgacggcggccgcggcggcgcc 2801936
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 80      gacggcgcccgcggcggcgcc 100
               |||||||||||||||||||||
Sbjct: 7414330 gacggcgcccgcggcggcgcc 7414310



 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 76      cgccgacggcgcccgcggcg 95
               ||||||||||||||||||||
Sbjct: 2001748 cgccgacggcgcccgcggcg 2001729
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0028E05
          Length = 157631

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 77     gccgacggcgcccgcggcggcgcca 101
              |||||||||||| ||||||||||||
Sbjct: 110069 gccgacggcgccagcggcggcgcca 110045
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 0.37
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 77      gccgacggcgcccgcggcggc 97
               |||||||||||||||||||||
Sbjct: 3324200 gccgacggcgcccgcggcggc 3324180
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>ref|XM_465041.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 639

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 38  gccgccggcgacgagggggaggcagcgg 65
           ||||||| |||||||| |||||||||||
Sbjct: 274 gccgccgccgacgaggaggaggcagcgg 301
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>emb|AJ297636.1|CRA297636 Caulerpa racemosa 18S rRNA gene (partial), 5.8S rRNA gene, internal
           transcribed spacer 1 (ITS1) and internal transcribed
           spacer 2 (ITS2), Japan Ishigaki
          Length = 1047

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 41  gccggcgacgagggggaggcagcg 64
           |||||||| |||||||||||||||
Sbjct: 359 gccggcgaagagggggaggcagcg 382
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>ref|NM_001007856.1| Xenopus tropicalis usf2 protein (usf2), mRNA
          Length = 2061

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gggaggcagcgggcagaagg 73
           ||||||||||||||||||||
Sbjct: 217 gggaggcagcgggcagaagg 198
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>gb|BC079958.1| Xenopus tropicalis usf2 protein, mRNA (cDNA clone MGC:79773
           IMAGE:6985281), complete cds
          Length = 2061

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 54  gggaggcagcgggcagaagg 73
           ||||||||||||||||||||
Sbjct: 217 gggaggcagcgggcagaagg 198
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 84      gcgcccgcggcggcgccagg 103
               ||||||||||||||||||||
Sbjct: 4246095 gcgcccgcggcggcgccagg 4246114
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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     gccgacggcgcccgcggcgg 96
              ||||||||||||||||||||
Sbjct: 133257 gccgacggcgcccgcggcgg 133238
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 92      ggcggcgccaggagcgcgtggccc 115
               |||||||||||||||| |||||||
Sbjct: 2539873 ggcggcgccaggagcgggtggccc 2539850
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 30      atcgtagagccgccggcgacgagg 53
               ||||| ||||||||||||||||||
Sbjct: 2577920 atcgtcgagccgccggcgacgagg 2577897
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 38       gccgccggcgacgagggggaggcagcgg 65
                ||||||| |||||||| |||||||||||
Sbjct: 11100672 gccgccgccgacgaggaggaggcagcgg 11100699
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>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0532H03
          Length = 166128

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 39     ccgccggcgacgagggggaggcag 62
              ||||||||||||||||| ||||||
Sbjct: 138566 ccgccggcgacgaggggcaggcag 138589
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>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    ccgccggcgacgagggggaggcag 62
             ||||||||||||||||| ||||||
Sbjct: 23011 ccgccggcgacgaggggcaggcag 23034
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>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0410C01
          Length = 138424

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     cgacggcgcccgcggcggcg 98
              ||||||||||||||||||||
Sbjct: 127384 cgacggcgcccgcggcggcg 127403
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>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1124_E11
          Length = 133524

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 38    gccgccggcgacgagggggaggcagcgg 65
             ||||||| |||||||| |||||||||||
Sbjct: 83366 gccgccgccgacgaggaggaggcagcgg 83393
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>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_D08
          Length = 119557

 Score = 40.1 bits (20), Expect = 1.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 38    gccgccggcgacgagggggaggcagcgg 65
             ||||||| |||||||| |||||||||||
Sbjct: 19851 gccgccgccgacgaggaggaggcagcgg 19878
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>gb|AC113121.27| Mus musculus chromosome 8, clone RP23-347G12, complete sequence
          Length = 192877

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      ctcggggcagcgaatggga 26
              |||||||||||||||||||
Sbjct: 183906 ctcggggcagcgaatggga 183924
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>ref|NM_188341.1| Oryza sativa (japonica cultivar-group), Ozsa8092 predicted mRNA
          Length = 744

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 76  cgccgacggcgcccgcggcggcg 98
           ||||| |||||||||||||||||
Sbjct: 160 cgccgccggcgcccgcggcggcg 138
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>ref|NM_196979.1| Oryza sativa (japonica cultivar-group) putative alcohol oxidase
           (OSJNBa0001K12.13), mRNA
          Length = 2271

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 80  gacggcgcccgcggcggcg 98
           |||||||||||||||||||
Sbjct: 193 gacggcgcccgcggcggcg 211
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>ref|XM_478691.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1338

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 38 gccgccggcgacgagggggaggc 60
          |||||||||||||||| ||||||
Sbjct: 57 gccgccggcgacgaggaggaggc 35
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>ref|NM_184591.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 561

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 76  cgccgacggcgcccgcggcggcg 98
           |||||||||||||| ||||||||
Sbjct: 279 cgccgacggcgcccacggcggcg 257
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 81      acggcgcccgcggcggcgc 99
               |||||||||||||||||||
Sbjct: 2240835 acggcgcccgcggcggcgc 2240853
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>ref|XM_883389.1| PREDICTED: Bos taurus hypothetical protein LOC618781 (LOC618781),
           mRNA
          Length = 595

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 82  cggcgcccgcggcggcgccagga 104
           ||||||||||||||||| |||||
Sbjct: 293 cggcgcccgcggcggcgacagga 271
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 76      cgccgacggcgcccgcggc 94
               |||||||||||||||||||
Sbjct: 3145013 cgccgacggcgcccgcggc 3144995
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 74      gtcgccgacggcgcccgcg 92
               |||||||||||||||||||
Sbjct: 2179379 gtcgccgacggcgcccgcg 2179397
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>gb|DQ481079.1| Uncultured bacterium clone UT-075_27 membrane bound nitrate
           reductase (narG) gene, partial cds
          Length = 651

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 75  tcgccgacggcgcccgcgg 93
           |||||||||||||||||||
Sbjct: 160 tcgccgacggcgcccgcgg 178
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 76       cgccgacggcgcccgcggcggcg 98
                |||||||||||||| ||||||||
Sbjct: 14369216 cgccgacggcgcccacggcggcg 14369238
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>gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0029P13, complete sequence
          Length = 158506

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 76    cgccgacggcgcccgcggcggcg 98
             ||||| |||||||||||||||||
Sbjct: 28548 cgccggcggcgcccgcggcggcg 28526
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 82      cggcgcccgcggcggcgcc 100
               |||||||||||||||||||
Sbjct: 1704614 cggcgcccgcggcggcgcc 1704632
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>gb|BC072452.1| Homo sapiens family with sequence similarity 107, member B, mRNA
           (cDNA clone IMAGE:6182033), complete cds
          Length = 2400

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 82  cggcgcccgcggcggcgcc 100
           |||||||||||||||||||
Sbjct: 134 cggcgcccgcggcggcgcc 116
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>gb|BC064407.1| Homo sapiens family with sequence similarity 107, member B, mRNA
           (cDNA clone IMAGE:5582531), complete cds
          Length = 2635

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 82  cggcgcccgcggcggcgcc 100
           |||||||||||||||||||
Sbjct: 104 cggcgcccgcggcggcgcc 86
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 71      agggtcgccgacggcgccc 89
               |||||||||||||||||||
Sbjct: 4300234 agggtcgccgacggcgccc 4300216



 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 79      cgacggcgcccgcggcggc 97
               |||||||||||||||||||
Sbjct: 4041267 cgacggcgcccgcggcggc 4041249
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>gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0051D10, complete sequence
          Length = 140272

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 76    cgccgacggcgcccgcggcggcg 98
             ||||| |||||||||||||||||
Sbjct: 44207 cgccggcggcgcccgcggcggcg 44229
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>emb|AL157706.17| Human DNA sequence from clone RP11-153L18 on chromosome 10 Contains a
             gene for a novel protein (MGC11034) and a CpG island,
             complete sequence
          Length = 118616

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    cggcgcccgcggcggcgcc 100
             |||||||||||||||||||
Sbjct: 86901 cggcgcccgcggcggcgcc 86919
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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 82    cggcgcccgcggcggcgcc 100
             |||||||||||||||||||
Sbjct: 22162 cggcgcccgcggcggcgcc 22144
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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 82     cggcgcccgcggcggcgcc 100
              |||||||||||||||||||
Sbjct: 135376 cggcgcccgcggcggcgcc 135358
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 74     gtcgccgacggcgcccgcg 92
              |||||||||||||||||||
Sbjct: 341067 gtcgccgacggcgcccgcg 341085
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 77     gccgacggcgcccgcggcg 95
              |||||||||||||||||||
Sbjct: 146213 gccgacggcgcccgcggcg 146231
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>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
              complete sequence
          Length = 144144

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 38     gccgccggcgacgagggggaggc 60
              |||||||||||||||| ||||||
Sbjct: 135831 gccgccggcgacgaggaggaggc 135809
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>gb|AY665889.1| Physalis crassifolia isolate PCSF 18S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene gene, and internal transcribed spacer 2,
           complete sequence; and 26S ribosomal RNA gene, partial
           sequence
          Length = 628

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 38  gccgccggcgacgagggggaggc 60
           |||||||| ||||||||||||||
Sbjct: 101 gccgccggggacgagggggaggc 79
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>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence
          Length = 35427

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 80   gacggcgcccgcggcggcg 98
            |||||||||||||||||||
Sbjct: 4218 gacggcgcccgcggcggcg 4236
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>emb|CR610285.1| full-length cDNA clone CS0DI054YN07 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 2231

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 82  cggcgcccgcggcggcgcc 100
           |||||||||||||||||||
Sbjct: 100 cggcgcccgcggcggcgcc 82
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>dbj|AP008980.1| Terrabacter sp. DBF63 plasmid pDBF1 genes, complete and partial cds
          Length = 70631

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    cgcccgcggcggcgccagg 103
             |||||||||||||||||||
Sbjct: 56711 cgcccgcggcggcgccagg 56693
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>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete
             sequence
          Length = 144724

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    gacggcgcccgcggcggcg 98
             |||||||||||||||||||
Sbjct: 83824 gacggcgcccgcggcggcg 83842
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>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
              sequence
          Length = 158714

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 76     cgccgacggcgcccgcggcggcg 98
              |||||||||||||| ||||||||
Sbjct: 118445 cgccgacggcgcccacggcggcg 118467
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete
               sequence
          Length = 1519138

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 82      cggcgcccgcggcggcgcc 100
               |||||||||||||||||||
Sbjct: 1468234 cggcgcccgcggcggcgcc 1468252
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 74      gtcgccgacggcgcccgcg 92
               |||||||||||||||||||
Sbjct: 1983706 gtcgccgacggcgcccgcg 1983688
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>emb|BX649633.13| Zebrafish DNA sequence from clone CH211-127A20 in linkage group 18,
             complete sequence
          Length = 164724

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    gagggggaggcagcgggca 68
             |||||||||||||||||||
Sbjct: 71257 gagggggaggcagcgggca 71239
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 76       cgccgacggcgcccgcggcggcg 98
                ||||| |||||||||||||||||
Sbjct: 25301535 cgccggcggcgcccgcggcggcg 25301513
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 80       gacggcgcccgcggcggcg 98
                |||||||||||||||||||
Sbjct: 17108512 gacggcgcccgcggcggcg 17108494
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 19       gaatgggatgcatcgtaga 37
                |||||||||||||||||||
Sbjct: 22053251 gaatgggatgcatcgtaga 22053269
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 38       gccgccggcgacgagggggaggc 60
                |||||||||||||||| ||||||
Sbjct: 22259883 gccgccggcgacgaggaggaggc 22259905
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 76       cgccgacggcgcccgcggcggcg 98
                |||||||||||||| ||||||||
Sbjct: 14364191 cgccgacggcgcccacggcggcg 14364213
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 76      cgccgacggcgcccgcggcggcg 98
               ||||| |||||||||||||||||
Sbjct: 5772499 cgccgccggcgcccgcggcggcg 5772477
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>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0567H04
          Length = 181420

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 38    gccgccggcgacgagggggaggc 60
             |||||||||||||||| ||||||
Sbjct: 65129 gccgccggcgacgaggaggaggc 65151
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>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0451C06
          Length = 151773

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 76    cgccgacggcgcccgcggcggcg 98
             ||||| |||||||||||||||||
Sbjct: 97201 cgccgccggcgcccgcggcggcg 97179
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 80      gacggcgcccgcggcggcg 98
               |||||||||||||||||||
Sbjct: 2085281 gacggcgcccgcggcggcg 2085299
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>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0085L11
          Length = 148142

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 78    ccgacggcgcccgcggcggcgcc 100
             ||||||||| |||||||||||||
Sbjct: 45395 ccgacggcggccgcggcggcgcc 45417
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 72      gggtcgccgacggcgcccg 90
               |||||||||||||||||||
Sbjct: 2010919 gggtcgccgacggcgcccg 2010937
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>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0635G10
          Length = 146728

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    gaatgggatgcatcgtaga 37
             |||||||||||||||||||
Sbjct: 95315 gaatgggatgcatcgtaga 95333
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>dbj|AB095015.1| Terrabacter sp. DBF63 DNA, angular dioxygenase region
          Length = 11859

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    cgcccgcggcggcgccagg 103
             |||||||||||||||||||
Sbjct: 11445 cgcccgcggcggcgccagg 11427
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>gb|AE005091.1| Halobacterium sp. NRC-1 section 122 of 170 of the complete genome
          Length = 12431

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 84   gcgcccgcggcggcgccag 102
            |||||||||||||||||||
Sbjct: 8481 gcgcccgcggcggcgccag 8499
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>dbj|AK120618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152B16, full
           insert sequence
          Length = 1526

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 38  gccgccggcgacgagggggaggc 60
           |||||||||||||||| ||||||
Sbjct: 104 gccgccggcgacgaggaggaggc 82
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>dbj|AK110190.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-A05, full
           insert sequence
          Length = 2818

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 72  gggtcgccgacggcgcccg 90
           |||||||||||||||||||
Sbjct: 437 gggtcgccgacggcgcccg 419
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>ref|NM_210644.1| Eremothecium gossypii AER435Wp (AER435W), mRNA
          Length = 2184

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 82  cggcgcccgcggcggcgcc 100
           |||||||||||||||||||
Sbjct: 440 cggcgcccgcggcggcgcc 458
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>dbj|AK067719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121K01, full
           insert sequence
          Length = 880

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 76  cgccgacggcgcccgcggcggcg 98
           ||||| |||||||||||||||||
Sbjct: 203 cgccgccggcgcccgcggcggcg 181
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     cggcgcccgcggcggcgcc 100
              |||||||||||||||||||
Sbjct: 632440 cggcgcccgcggcggcgcc 632458
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 73     ggtcgccgacggcgcccgc 91
              |||||||||||||||||||
Sbjct: 942450 ggtcgccgacggcgcccgc 942432
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 80       gacggcgcccgcggcggcg 98
                |||||||||||||||||||
Sbjct: 17117552 gacggcgcccgcggcggcg 17117534
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 5.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 76       cgccgacggcgcccgcggcggcg 98
                ||||| |||||||||||||||||
Sbjct: 25620205 cgccggcggcgcccgcggcggcg 25620183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 758,643
Number of Sequences: 3902068
Number of extensions: 758643
Number of successful extensions: 77716
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71725
Number of HSP's gapped (non-prelim): 5991
length of query: 125
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 104
effective length of database: 17,151,101,840
effective search space: 1783714591360
effective search space used: 1783714591360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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