ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CCAR1_XENLA (Q641G3) Cell division cycle and apoptosis regulator... 31 0.73
2CCAR1_HUMAN (Q8IX12) Cell division cycle and apoptosis regulator... 30 1.6
3CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator... 30 2.1
4PVDR_PLAVS (P22290) Duffy receptor precursor (Erythrocyte-bindin... 28 8.1

>CCAR1_XENLA (Q641G3) Cell division cycle and apoptosis regulator protein 1|
          Length = 1157

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 262 KTQKHREKARKNKAKNSTNPRSKNKTELQP*GERRKKPRASGRAV 128
           K  ++RE+ R+ +     +P+ K   E  P  ER + PR   R V
Sbjct: 322 KDDRNRERERERRRSRDRSPQRKRSRERSPRRERERSPRRPRRVV 366



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>CCAR1_HUMAN (Q8IX12) Cell division cycle and apoptosis regulator protein 1|
           (Cell cycle and apoptosis regulatory protein 1) (CARP-1)
           (Death inducer with SAP domain)
          Length = 1150

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 262 KTQKHREKARKNKAKNSTNPRSKNKTELQP*GERRKKPRASGRAV 128
           K  + RE+ R+ +     +P+ K   E  P  ER + PR   R V
Sbjct: 315 KDDRSRERERERRRSRERSPQRKRSRERSPRRERERSPRRVRRVV 359



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>CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator protein 1|
           (Cell cycle and apoptosis regulatory protein 1) (CARP-1)
          Length = 1146

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -1

Query: 262 KTQKHREKARKNKAKNSTNPRSKNKTELQP*GERRKKPRASGRAV 128
           K  + RE+ R+ +     +P+ K   E  P  ER + PR   R V
Sbjct: 312 KDDRSRERDRERRRSRERSPQRKRSRERSPRRERERSPRRVRRVV 356



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>PVDR_PLAVS (P22290) Duffy receptor precursor (Erythrocyte-binding protein)|
          Length = 1070

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 244 EKARKNKAKNSTNPRSKNKTE 182
           ++ R+N A  STN RSKN TE
Sbjct: 770 DRIRENSAGGSTNDRSKNDTE 790


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,149,400
Number of Sequences: 219361
Number of extensions: 274900
Number of successful extensions: 1183
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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