ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DVL2_HUMAN (O14641) Segment polarity protein dishevelled homolog... 30 2.9
2TTRAP_MOUSE (Q9JJX7) TRAF and TNF receptor-associated protein 28 8.6
3IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1) 28 8.6
4EAF7_DEBHA (Q6BKL0) Chromatin modification-related protein EAF7 28 8.6
5DVL2_MOUSE (Q60838) Segment polarity protein dishevelled homolog... 28 8.6

>DVL2_HUMAN (O14641) Segment polarity protein dishevelled homolog DVL-2|
           (Dishevelled-2) (DSH homolog 2)
          Length = 736

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +3

Query: 3   KKESPRRRTSSERGAGHHALPEP 71
           ++E PRRR SSE GAG H    P
Sbjct: 160 RRERPRRRDSSEHGAGGHRTGGP 182



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>TTRAP_MOUSE (Q9JJX7) TRAF and TNF receptor-associated protein|
          Length = 370

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +1

Query: 142 ALQHQHQLDETQQSWLLGPPEAKKKDRYVDL 234
           AL    +L E  Q W   PP + K + YVDL
Sbjct: 68  ALSAYFELPENDQGWPRQPPTSFKSEAYVDL 98



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>IRS1_CERAE (Q28224) Insulin receptor substrate 1 (IRS-1)|
          Length = 1251

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 148 QHQHQLDETQQSWLLGPPEAKKKDRYVDL 234
           Q Q Q  + QQ  LL PPE K    YV++
Sbjct: 880 QQQQQQQQQQQQPLLHPPEPKSPGEYVNI 908



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>EAF7_DEBHA (Q6BKL0) Chromatin modification-related protein EAF7|
          Length = 323

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
 Frame = +1

Query: 88  DIDGAEDDQSRNMD--------IDRGALQHQHQLDETQQSWLLGPPEAKKKDR 222
           D D  +DD   N          + RGA +HQH+L +       G P+ KK+ R
Sbjct: 197 DDDDQDDDDDENESGEGSLQKRVTRGARKHQHELSDQ-----TGTPKPKKRTR 244



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>DVL2_MOUSE (Q60838) Segment polarity protein dishevelled homolog DVL-2|
           (Dishevelled-2) (DSH homolog 2)
          Length = 736

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = +3

Query: 3   KKESPRRRTSSERGAGHH 56
           +++ PRRR SSE GAG H
Sbjct: 160 RRDRPRRRDSSEHGAGGH 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,207,763
Number of Sequences: 219361
Number of extensions: 551881
Number of successful extensions: 2009
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2009
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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