ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet97a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EA92_VICFA (P21747) Embryonic abundant protein USP92 precursor 38 0.007
2EA30_VICFA (P21745) Embryonic abundant protein VF30.1 precursor 37 0.009
3RD22_ARATH (Q08298) Dehydration-responsive protein RD22 precursor 37 0.011
4SVF30_VICFA (P09059) Unknown seed protein 30.1 precursor (VF30.1) 36 0.025
5EA87_VICFA (P21746) Embryonic abundant protein USP87 precursor 36 0.025
6PPSA_MYCTU (Q10977) Phenolpthiocerol synthesis polyketide syntha... 31 0.62
7KLK9_HUMAN (Q9UKQ9) Kallikrein-9 precursor (EC 3.4.21.-) (Kallik... 31 0.81
8OSP4_PEA (P17771) Organ-specific protein P4 29 3.1
9AMPD2_HUMAN (Q01433) AMP deaminase 2 (EC 3.5.4.6) (AMP deaminase... 28 4.0
10ADA15_RAT (Q9QYV0) ADAM 15 precursor (EC 3.4.24.-) (A disintegri... 28 4.0
11EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline... 28 5.2
12XDH_EMENI (Q12553) Xanthine dehydrogenase (EC 1.17.1.4) (Purine ... 28 6.8
13ENK19_HUMAN (Q6ZVY0) HERV-K_4p16.1 provirus ancestral Env polypr... 28 6.8
14RIR1_HUMAN (P23921) Ribonucleoside-diphosphate reductase large s... 28 6.8
15OSS2_PEA (P17772) Organ-specific protein S2 28 6.8
16MMP11_HUMAN (P24347) Stromelysin-3 precursor (EC 3.4.24.-) (ST3)... 28 6.8
17MYLK_HUMAN (Q15746) Myosin light chain kinase, smooth muscle and... 27 8.9

>EA92_VICFA (P21747) Embryonic abundant protein USP92 precursor|
          Length = 268

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 140 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 256
           +L+   +A VG  A  +   YW+S  PNTP+P + S LL
Sbjct: 8   VLSLFCLAFVGITATSSEEDYWQSIWPNTPLPKTFSDLL 46



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>EA30_VICFA (P21745) Embryonic abundant protein VF30.1 precursor|
          Length = 268

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 140 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 256
           +L+   +A VG  A  +   YW+S  PNTP+P + S LL
Sbjct: 8   VLSLFCLAFVGITATSSGEDYWQSIWPNTPLPKTFSDLL 46



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>RD22_ARATH (Q08298) Dehydration-responsive protein RD22 precursor|
          Length = 392

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +2

Query: 122 RLVAAGILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 256
           RL    +L   ++ ++   A   P +YW +ALPNTP+P+SL  LL
Sbjct: 4   RLPLICLLGSFMVVAIA--ADLTPERYWSTALPNTPIPNSLHNLL 46



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>SVF30_VICFA (P09059) Unknown seed protein 30.1 precursor (VF30.1)|
          Length = 268

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +2

Query: 140 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQL 253
           +L+   +A VG  A  +   YW+S  PNTP+P + S L
Sbjct: 8   VLSLFCLAFVGITATSSGEDYWQSIWPNTPLPKTFSDL 45



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>EA87_VICFA (P21746) Embryonic abundant protein USP87 precursor|
          Length = 268

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 140 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLL 256
           +L+   +A VG  A      YW+S  PNTP+P + S +L
Sbjct: 8   VLSLFCLAFVGITATSPREDYWQSIWPNTPLPKTFSDML 46



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>PPSA_MYCTU (Q10977) Phenolpthiocerol synthesis polyketide synthase ppsA|
          Length = 1876

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 131 AAGILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLLDTQ 265
           AAGI  F+       H    P Q++E+A P+ P      +++DTQ
Sbjct: 452 AAGIAGFIKTVLAVQHGQIPPNQHFETANPHIPFTDLRMKVVDTQ 496



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>KLK9_HUMAN (Q9UKQ9) Kallikrein-9 precursor (EC 3.4.21.-) (Kallikrein-like|
           protein 3) (KLK-L3)
          Length = 250

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -1

Query: 179 HGFLPTRSVGRQECRLRRAYPWRAG 105
           HG+  TR++G +ECR   + PW+AG
Sbjct: 16  HGWADTRAIGAEECR-PNSQPWQAG 39



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>OSP4_PEA (P17771) Organ-specific protein P4|
          Length = 130

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 140 ILAFLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLLD 259
           +  FL++A+V S   +  G+YW+  + +  MP  +  LLD
Sbjct: 13  LFLFLIVANVESR--KDVGEYWKLVMKDQDMPEEIQGLLD 50



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>AMPD2_HUMAN (Q01433) AMP deaminase 2 (EC 3.5.4.6) (AMP deaminase isoform L)|
          Length = 879

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -1

Query: 149 RQECRLRRAYPWRAGQRAAMRKLTAGPSQCEDD 51
           R  C L ++ P  AG+R  +     GPS+C  D
Sbjct: 12  RSRCFLHQSLPLGAGRRKGLDVAEPGPSRCRSD 44



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>ADA15_RAT (Q9QYV0) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 15) (Metalloproteinase-like,
           disintegrin-like, and cysteine-rich protein 15) (MDC-15)
           (Metalloprotease RGD disintegrin protein) (Metargidin)
           (CRII-7)
          Length = 816

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = +1

Query: 139 HSCLPTDRVGRKPC-SSCSGAILGVC-SSQHSH 231
           H C P D +G + C S C G   GVC SS+H H
Sbjct: 646 HRCQPVDLLGAQECRSKCHGH--GVCDSSRHCH 676



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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 324 PWPASTWTPPEPTFTDVPPA 265
           P P+ T++PP PT++  PP+
Sbjct: 276 PQPSPTYSPPPPTYSPPPPS 295



 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 324 PWPASTWTPPEPTFTDVPPA 265
           P P  T++PP PT++  PPA
Sbjct: 442 PPPPPTYSPPPPTYSPPPPA 461



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>XDH_EMENI (Q12553) Xanthine dehydrogenase (EC 1.17.1.4) (Purine hydroxylase|
           I)
          Length = 1363

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 22/79 (27%), Positives = 35/79 (44%)
 Frame = -3

Query: 315 ASTWTPPEPTFTDVPPACVSRS*ERELGMGVLGRADSQYCPGARAAWLPTDAISRKARMP 136
           AS  +   P F       V+RS ++E  + +     +Q+  G R+  LP DAI    R+P
Sbjct: 392 ASPISDLNPVFVATNTTLVARSLDKETEIPM-----TQFFRGYRSTALPPDAIISSLRIP 446

Query: 135 AATSLSMEGRAEGSNEEAD 79
            A+      RA   ++  D
Sbjct: 447 TASEKGEYLRAYKQSKRKD 465



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>ENK19_HUMAN (Q6ZVY0) HERV-K_4p16.1 provirus ancestral Env polyprotein precursor|
           (Envelope polyprotein) [Includes: Truncated surface
           protein (SU)]
          Length = 342

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
 Frame = -1

Query: 245 RGSLAWECWEE-----QTPSIAPEHELHGFLPTRSVGRQECRLRRAYPWRAGQR 99
           RG L ++C  +     Q PS+ P +  +    T+ + +   RL   YPW+ G++
Sbjct: 268 RGQLYYDCMGQTHSCSQAPSVWPTNLAYDGDLTKRLDQVYRRLESPYPWKWGEK 321



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>RIR1_HUMAN (P23921) Ribonucleoside-diphosphate reductase large subunit (EC|
           1.17.4.1) (Ribonucleoside-diphosphate reductase M1
           subunit) (Ribonucleotide reductase large chain)
          Length = 792

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 276 VPPACVSRS*ERELGMGVLGRADS 205
           VP AC+S    R +G+GV G AD+
Sbjct: 488 VPEACLSNKRHRPIGIGVQGLADA 511



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>OSS2_PEA (P17772) Organ-specific protein S2|
          Length = 181

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 149 FLLIASVGSHAARAPGQYWESALPNTPMPSSLSQLLD 259
           FLL+      + +  G+YW+  + +  MP  +  LLD
Sbjct: 13  FLLLIVANVESRKDVGEYWKLVMKDQDMPEEIQGLLD 49



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>MMP11_HUMAN (P24347) Stromelysin-3 precursor (EC 3.4.24.-) (ST3) (SL-3) (Matrix|
           metalloproteinase-11) (MMP-11)
          Length = 488

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 176 HAARAPGQYWESALPNTPMPSSLSQ 250
           HA R   Q W +ALP++P P+  +Q
Sbjct: 42  HAERRGPQPWHAALPSSPAPAPATQ 66



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>MYLK_HUMAN (Q15746) Myosin light chain kinase, smooth muscle and non-muscle|
           isozymes (EC 2.7.11.18) (MLCK) [Contains: Telokin
           (Kinase-related protein) (KRP)]
          Length = 1914

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 134 LRRAYPWRAGQRAAMRKLTAGPSQCEDDLLAQ 39
           L++  PW AGQ   + K   G   C+  L+ Q
Sbjct: 781 LKKVQPWHAGQYEILLKNRVGECSCQVSLMLQ 812


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,803,475
Number of Sequences: 219361
Number of extensions: 898868
Number of successful extensions: 2737
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2729
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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