ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet97a02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL645504.10| Human DNA sequence from clone RP11-90L20 on chromosome 1 Contains the 3' end of the NAV1 gene for neuron navigator 1, two novel genes and the 5' end of the IPO9 gene for importin 9, complete sequence Length = 201934 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 69129 cccctcttcctcccctcccca 69109
>emb|AL031597.7|HS996D20 Human DNA sequence from clone RP5-996D20 on chromosome 22q13.31-13.32, complete sequence Length = 98100 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 25810 cccctcttcctcccctcccca 25830
>gb|AC092800.2| Homo sapiens chromosome 1 clone RP11-25B7, complete sequence Length = 169405 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 46698 cccctcttcctcccctcccca 46718
>emb|BX004983.8| Zebrafish DNA sequence from clone DKEY-7F3, complete sequence Length = 234489 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 taaacccctcttcctcccctc 83 ||||||||||||||||||||| Sbjct: 219873 taaacccctcttcctcccctc 219893
>emb|AJ251973.1|HSA251973 Homo sapiens partial steerin-1 gene Length = 200033 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 186720 cccctcttcctcccctcccca 186700
>gb|AC152831.2| Ornithorhynchus anatinus chromosome UNK clone OABb-168A1, complete sequence Length = 139370 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 39752 cccctcttcctcccctcccca 39772
>gb|AC166061.2| Mus musculus BAC clone RP23-177N16 from chromosome 14, complete sequence Length = 213071 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccca 87 ||||||||||||||||||||| Sbjct: 85293 cccctcttcctcccctcccca 85273
>gb|AC120880.8| Mus musculus chromosome 3, clone RP24-553A12, complete sequence Length = 147280 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116191 cccctcttcctcccctcccc 116210 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116169 cccctcttcctcccctcccc 116188 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116124 cccctcttcctcccctcccc 116143 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116079 cccctcttcctcccctcccc 116098 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116057 cccctcttcctcccctcccc 116076 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116035 cccctcttcctcccctcccc 116054 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 116013 cccctcttcctcccctcccc 116032
>gb|AC109157.10| Mus musculus chromosome 7, clone RP24-169M16, complete sequence Length = 164968 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 139643 cccctcttcctcccctcccc 139662
>gb|AC113177.16| Mus musculus chromosome 15, clone RP23-447G7, complete sequence Length = 179268 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 agaagcctccttctcctcct 117 |||||||||||||||||||| Sbjct: 120939 agaagcctccttctcctcct 120920
>gb|AC164640.4| Mus musculus BAC clone RP23-228M12 from chromosome 7, complete sequence Length = 232468 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 113655 cccctcttcctcccctcccc 113636
>gb|AC125171.4| Mus musculus BAC clone RP24-475M20 from chromosome 6, complete sequence Length = 167590 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 9742 cccctcttcctcccctcccc 9723
>gb|AC122845.4| Mus musculus BAC clone RP23-155G2 from 1, complete sequence Length = 215455 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 152502 cccctcttcctcccctcccc 152483
>gb|AC122829.4| Mus musculus BAC clone RP23-224F12 from 10, complete sequence Length = 155915 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 14466 cccctcttcctcccctcccc 14485 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 14443 cccctcttcctcccctcccc 14462
>gb|AC116465.8| Mus musculus chromosome 10, clone RP23-64J3, complete sequence Length = 237801 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 97368 cccctcttcctcccctcccc 97387
>gb|AC160553.7| Mus musculus chromosome 7, clone RP23-334C12, complete sequence Length = 191999 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 67441 cccctcttcctcccctcccc 67460
>emb|AL121987.34|HSBA536C5 Human DNA sequence from clone RP11-536C5 on chromosome 1q23.1-24.1 Contains the 5' end of the KCNJ10 gene for potassium inwardly-rectifying channel subfamily J member 10, a novel gene, the KCNJ9 gene for potassium inwardly-rectifying channel subfamily J member 9, the IGSF8 gene for immunoglobulin superfamily member 8, the ATP1A2 gene for Na+/K+ transporting ATPase alpha 2 (+) polypeptide, the ATP1A4 gene for Na+/K+ transporting ATPase alpha 4 (+) polypeptide, the CASQ1 gene for calsequestrin 1 (fast-twitch, skeletal muscle), a novel gene, the PEA15 gene for phosphoprotein enriched in astrocytes 15 and four CpG islands, complete sequence Length = 170834 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 22065 cccctcttcctcccctcccc 22046
>emb|AL691468.12| Mouse DNA sequence from clone RP23-20K13 on chromosome 4 Contains the 3' end of a novel gene (4933412J03Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the Tnfsf15 gene for tumor necrosis factor (ligand) superfamily member 15 and the 3' end of the Tnfsf8 for tumor necrosis factor (ligand) superfamily member 8, complete sequence Length = 212420 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 24487 cccctcttcctcccctcccc 24506
>gb|AC005906.1| Homo sapiens 12p13.3 BAC RPCI11-429A20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185952 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 aacccctcttcctcccctcc 84 |||||||||||||||||||| Sbjct: 111968 aacccctcttcctcccctcc 111987
>dbj|AK018569.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030623N16 product:hypothetical protein, full insert sequence Length = 1594 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ccaaatggccaagagaagcc 104 |||||||||||||||||||| Sbjct: 1359 ccaaatggccaagagaagcc 1340
>gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome unknown, complete sequence Length = 239189 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 caagatctaaacccctcttc 75 |||||||||||||||||||| Sbjct: 75311 caagatctaaacccctcttc 75330
>emb|BX546504.9| Mouse DNA sequence from clone RP23-78N22 on chromosome X, complete sequence Length = 107447 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 caagatctaaacccctcttc 75 |||||||||||||||||||| Sbjct: 26448 caagatctaaacccctcttc 26467
>gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174195 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 164682 cccctcttcctcccctcccc 164701 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 164659 cccctcttcctcccctcccc 164678
>gb|AC155726.4| Mus musculus 6 BAC RP24-180C9 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 187560 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 145731 cccctcttcctcccctcccc 145712
>gb|AC113207.8| Mus musculus chromosome 10, clone RP23-323O18, complete sequence Length = 237187 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 8880 cccctcttcctcccctcccc 8899
>emb|AL844566.8| Mouse DNA sequence from clone RP23-173H17 on chromosome 2, complete sequence Length = 229583 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 ccaaatggccaagagaagcc 104 |||||||||||||||||||| Sbjct: 181354 ccaaatggccaagagaagcc 181373
>gb|AC140553.3| Mus musculus BAC clone RP24-71M17 from 1, complete sequence Length = 217538 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctcccc 86 |||||||||||||||||||| Sbjct: 57979 cccctcttcctcccctcccc 57960
>ref|NM_025777.1| Mus musculus RIKEN cDNA 9030623N16 gene (9030623N16Rik), mRNA Length = 1594 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 ccaaatggccaagagaagcc 104 |||||||||||||||||||| Sbjct: 1359 ccaaatggccaagagaagcc 1340
>gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, complete sequence Length = 206094 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 81464 ccctcttcctcccctcccc 81446
>ref|NM_106633.1| Arabidopsis thaliana GL2 (GLABRA 2); DNA binding / transcription factor AT1G79840 (GL2) mRNA, complete cds Length = 2433 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcc 113 ||||||||||||||||||| Sbjct: 1377 aagagaagcctccttctcc 1359
>ref|NM_100964.1| Arabidopsis thaliana unknown protein AT1G10890 mRNA, complete cds Length = 2480 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcctcct 117 |||||||||||| |||||||||| Sbjct: 1115 aagagaagcctctttctcctcct 1093
>gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, complete sequence Length = 174746 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 70001 ccctcttcctcccctcccc 69983
>ref|XM_528454.1| PREDICTED: Pan troglodytes similar to ribosomal protein L7a; thyroid hormone receptor uncoupling protein; 60S ribosomal protein L7a; surfeit 3; surfeit locus protein 3; PLA-X polypeptide (LOC473084), mRNA Length = 1062 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggcgcta 124 ||||||| ||||||||||||||| Sbjct: 227 gcctcctgctcctcctggcgcta 249
>gb|AY789109.1| Homo sapiens interleukin 3 receptor, alpha (low affinity) (IL3RA) gene, complete cds Length = 49973 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 cctcttcctcccctcccca 87 ||||||||||||||||||| Sbjct: 19940 cctcttcctcccctcccca 19922
>gb|AC158792.2| Mus musculus chromosome 3, clone RP23-300L15, complete sequence Length = 205546 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 76380 ccctcttcctcccctcccc 76398
>gb|AC087213.2| Rattus norvegicus strain Brown Norway clone RP31-422M21, complete sequence Length = 64575 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 ccaaatggccaagagaagc 103 ||||||||||||||||||| Sbjct: 8225 ccaaatggccaagagaagc 8243
>gb|AC087112.2| Rattus norvegicus strain Brown Norway clone RP31-162L19, complete sequence Length = 149639 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 ccaaatggccaagagaagc 103 ||||||||||||||||||| Sbjct: 147842 ccaaatggccaagagaagc 147860
>gb|AC166779.3| Mus musculus chromosome 18, clone RP23-399N10, complete sequence Length = 200851 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 141995 ccctcttcctcccctcccc 142013
>gb|AC140492.3| Mus musculus BAC clone RP24-137B3 from chromosome 5, complete sequence Length = 157199 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 ctcttcctcccctccccaa 88 ||||||||||||||||||| Sbjct: 144480 ctcttcctcccctccccaa 144462
>gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, complete sequence Length = 180370 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 ctcttcctcccctccccaa 88 ||||||||||||||||||| Sbjct: 169849 ctcttcctcccctccccaa 169867
>gb|AY585209.1| Homo sapiens fibroblast growth factor receptor 1 (fms-related tyrosine kinase 2, Pfeiffer syndrome) (FGFR1) gene, complete cds Length = 59574 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 3678 ccctcttcctcccctcccc 3696
>gb|AC102545.9| Mus musculus chromosome 9, clone RP23-118J13, complete sequence Length = 241789 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 198860 ccctcttcctcccctcccc 198878
>gb|BC104719.1| Rattus norvegicus cDNA clone IMAGE:7381995 Length = 2050 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 cctccttctcctcctggcg 121 ||||||||||||||||||| Sbjct: 545 cctccttctcctcctggcg 563
>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence Length = 190937 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 139014 ccctcttcctcccctcccc 139032
>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence Length = 218519 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 70 ctcttcctcccctccccaaatgg 92 ||||||||||||||||| ||||| Sbjct: 31420 ctcttcctcccctcccccaatgg 31442
>gb|AC133203.3| Mus musculus BAC clone RP23-85M7 from chromosome 15, complete sequence Length = 227133 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 gccaagagaagcctccttc 110 ||||||||||||||||||| Sbjct: 215240 gccaagagaagcctccttc 215222
>gb|AC133099.3| Mus musculus BAC clone RP23-90K8 from chromosome 19, complete sequence Length = 224638 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 220787 ccctcttcctcccctcccc 220769
>gb|AC146815.1| Mus musculus BAC clone RP23-239A11 from chromosome 8, complete sequence Length = 203073 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctccc 85 ||||||||||||||||||| Sbjct: 85976 cccctcttcctcccctccc 85958
>emb|X61923.1|HSSURF3 H.sapiens surf3 gene for ribosomal protein L7a Length = 3433 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggcgcta 124 ||||||| ||||||||||||||| Sbjct: 365 gcctcctgctcctcctggcgcta 387
>gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosome 3, complete sequence Length = 162693 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 116669 ccctcttcctcccctcccc 116687
>gb|AC112271.4| Mus musculus BAC clone RP24-121H20 from chromosome 19, complete sequence Length = 170681 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 170438 ccctcttcctcccctcccc 170456
>gb|AC123069.4| Mus musculus BAC clone RP23-23B21 from 9, complete sequence Length = 162961 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 67 cccctcttcctcccctccc 85 ||||||||||||||||||| Sbjct: 84375 cccctcttcctcccctccc 84357
>gb|AC122261.2| Mus musculus BAC clone RP23-187F24 from 15, complete sequence Length = 223801 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 gccaagagaagcctccttc 110 ||||||||||||||||||| Sbjct: 57845 gccaagagaagcctccttc 57827
>gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, complete sequence Length = 208678 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 67 cccctcttcctcccctccc 85 ||||||||||||||||||| Sbjct: 106057 cccctcttcctcccctccc 106075
>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20 Length = 477159 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 247444 ccctcttcctcccctcccc 247426
>emb|CR974413.1| M.murinus DNA sequence from clone CH257-4B4, complete sequence Length = 270722 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 agcctccttctcctcctgg 119 ||||||||||||||||||| Sbjct: 157855 agcctccttctcctcctgg 157837 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 agcctccttctcctcctgg 119 ||||||||||||||||||| Sbjct: 103959 agcctccttctcctcctgg 103941
>emb|CR974412.1| M.murinus DNA sequence from clone CH257-37C10, complete sequence Length = 250701 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 101 agcctccttctcctcctgg 119 ||||||||||||||||||| Sbjct: 241678 agcctccttctcctcctgg 241696
>ref|NG_000837.1| Homo sapiens surfeit locus (SURF@) on chromosome 9 Length = 45425 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggcgcta 124 ||||||| ||||||||||||||| Sbjct: 17644 gcctcctgctcctcctggcgcta 17666
>emb|AL355312.24| Human DNA sequence from clone RP11-350J20 on chromosome 6 Contains gene FLJ13287, the PCMT1 gene for protein-L-isoaspartate (D-aspartate) O-methyltransferase,gene FLJ14735, a novel pseudogene, a novel gene, t-complex 1 (TCP1) pseudogene, the gene for lymphocyte effector toxicity activation ligand (LETAL), the 5' end of a novel gene, a novel pseudogene similar to FLJ13465 and four CpG islands, complete sequence Length = 188684 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 66 acccctcttcctcccctcc 84 ||||||||||||||||||| Sbjct: 105032 acccctcttcctcccctcc 105014
>emb|BX119906.16| Human DNA sequence from clone RP13-309C18 on chromosome X Contains part of the IL3RA gene for interleukin 3 receptor, alpha (low affinity) (IL3R, CD123, IL3RX, IL3RY, IL3RAY, hIL-3Ra, MGC34174)and two CpG islands, complete sequence Length = 35666 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 cctcttcctcccctcccca 87 ||||||||||||||||||| Sbjct: 10275 cctcttcctcccctcccca 10257
>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the 3' end of the KCNN3 gene for potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, a novel gene and the 5' end of the ADAR gene for adenosine deaminase, RNA-specific, complete sequence Length = 173014 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 65 aacccctcttcctcccctcccca 87 |||||||| |||||||||||||| Sbjct: 169571 aacccctcctcctcccctcccca 169549
>emb|AL589923.11| Human DNA sequence from clone RP11-374O2 on chromosome 9 Contains part of a novel gene, complete sequence Length = 104685 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 16086 ccctcttcctcccctcccc 16104
>emb|AL158826.23| Human DNA sequence from clone RP11-244N20 on chromosome 9 Contains the 5' end of the ABO gene for ABO blood group (transferase A alpha 1-3-N-acetylgalactosaminyltransferase; transferase B alpha 1-3-galactosyltransferase) pseudogene ABO-*O02 allele, the gene for a novel protein similar to lipocalin 1 (protein migrating faster than albumin tear prealbumin) (LCN1), a ribosomal protein L21 (RPL21) pseudogene, the RPL7A gene for ribosomal protein L7a, a novel gene (MGC43306), the XPMC2H gene for Xenopus prevents mitotic catastrophe 2 homolog, the 5' end of the ADAMTS13 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 13, the SURF1 gene for surfeit 1, the SURF2 gene for surfeit 2, the SURF4 gene for surfeit 4, the SURF5 gene for surfeit 5, the SURF6 gene for surfeit 6 and eight CpG islands, complete sequence Length = 184513 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggcgcta 124 ||||||| ||||||||||||||| Sbjct: 81841 gcctcctgctcctcctggcgcta 81863
>emb|AL162386.17| Human DNA sequence from clone RP11-272P10 on chromosome 9 Contains the 5' end of the MPDZ gene for multiple PDZ domain protein, a novel gene, an inhibitor of growth family member 1 (ING1) pseudogene and a CpG island, complete sequence Length = 164138 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 caaatggccaagagaagcc 104 ||||||||||||||||||| Sbjct: 56547 caaatggccaagagaagcc 56565
>emb|AL121894.26|HSA218C14 Human DNA sequence from clone RP11-218C14 on chromosome 20 Contains the 3' end of a novel gene, two genes for novel proteins similar to cystatin 9-like (mouse) (CST9L), the CST9L gene for cystatin 9-like (mouse), a cystatin 9-like (mouse) pseudogene, the CST3 gene for cystatin C, a novel gene and a CpG island, complete sequence Length = 141079 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 138572 ccctcttcctcccctcccc 138590
>emb|AL035414.30|HS667H12 Human DNA sequence from clone RP4-667H12 on chromosome 1q32.1-41 Contains a novel gene, the SERTAD4 gene for SERTA domain containing protein 4, a processed pseudogene similar to putative tumor suppressor ST13, a processed pseudogene similar to ribonuclease H1 (RNASEH1), the 5' end of the gene for melanoma antigen recognized by T cells 2 (MART2) protein and a CpG island, complete sequence Length = 131239 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 41710 ccctcttcctcccctcccc 41692
>gb|AC107743.14| Mus musculus chromosome 1, clone RP23-326A12, complete sequence Length = 221645 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 86420 ccctcttcctcccctcccc 86438
>emb|Z54356.1|ATATHB10 A.thaliana Athb-10 gene Length = 5972 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcc 113 ||||||||||||||||||| Sbjct: 3310 aagagaagcctccttctcc 3292
>ref|XM_776255.1| PREDICTED: Strongylocentrotus purpuratus similar to fibrillin 1 (LOC575891), mRNA Length = 2019 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 6 ctcacaaacagcaccatac 24 ||||||||||||||||||| Sbjct: 1290 ctcacaaacagcaccatac 1272
>gb|AF360294.1| Arabidopsis thaliana putative homeobox protein GLABRA2 (At1g79840) mRNA, complete cds Length = 2450 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcc 113 ||||||||||||||||||| Sbjct: 1377 aagagaagcctccttctcc 1359
>emb|BX883049.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 8/11 Length = 349476 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 103 cctccttctcctcctggcg 121 ||||||||||||||||||| Sbjct: 19032 cctccttctcctcctggcg 19014
>emb|AL645532.16| Mouse DNA sequence from clone RP23-295E4 on chromosome 11 Contains two novel genes, the 3' end of the Egfr gene for epidermal growth factor receptor and the gene for a novel F-box domain containing protein, complete sequence Length = 161348 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 70848 ccctcttcctcccctcccc 70830
>emb|AJ457046.1|ATH457046 Arabidopsis thaliana mRNA for homeodomain-leucine zipper 10 (ATHB-10 gene) Length = 2244 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcc 113 ||||||||||||||||||| Sbjct: 1266 aagagaagcctccttctcc 1248
>emb|CR392032.9| Zebrafish DNA sequence from clone DKEYP-64A3 in linkage group 2, complete sequence Length = 191649 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 aaacccctcttcctcccct 82 ||||||||||||||||||| Sbjct: 92574 aaacccctcttcctcccct 92556
>gb|AY126988.1| Arabidopsis thaliana At1g10890/T19D16_19 mRNA sequence Length = 2689 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcctcct 117 |||||||||||| |||||||||| Sbjct: 2167 aagagaagcctctttctcctcct 2145
>gb|AC003684.1| Homo sapiens X BAC GS1-519E5 (Genome Systems Human BAC library) complete sequence Length = 210954 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 149598 ccctcttcctcccctcccc 149616
>ref|NM_169474.1| Drosophila melanogaster CG31355-PA (CG31355) mRNA, complete cds Length = 1157 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggc 120 ||||||||||||||||||| Sbjct: 1134 gcctccttctcctcctggc 1152
>gb|AC091551.14| Homo sapiens chromosome 18, clone RP11-729G3, complete sequence Length = 156211 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 accccctcacaaacagcaccata 23 ||||||||||||||||| ||||| Sbjct: 99261 accccctcacaaacagccccata 99239
>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence Length = 151712 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 100002 ccctcttcctcccctcccc 99984
>gb|AC151895.4| Mus musculus BAC clone RP24-323A22 from chromosome 10, complete sequence Length = 224442 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 86 caaatggccaagagaagcctcct 108 |||||||||||||||||| |||| Sbjct: 146666 caaatggccaagagaagcttcct 146688
>gb|AC007668.7| Drosophila melanogaster, chromosome 3R, region 87C-87C, BAC clone BACR02G11, complete sequence Length = 167239 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggc 120 ||||||||||||||||||| Sbjct: 157712 gcctccttctcctcctggc 157730
>gb|AC132139.4| Mus musculus BAC clone RP23-181A24 from chromosome 10, complete sequence Length = 206712 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 58513 ccctcttcctcccctcccc 58531
>gb|AC158233.2| Mus musculus BAC clone RP23-240E15 from chromosome 3, complete sequence Length = 209923 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 154333 ccctcttcctcccctcccc 154351
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel (KCNN3) gene, complete cds Length = 163217 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 65 aacccctcttcctcccctcccca 87 |||||||| |||||||||||||| Sbjct: 114543 aacccctcctcctcccctcccca 114565
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 cctcttcctcccctcccca 87 ||||||||||||||||||| Sbjct: 14769133 cctcttcctcccctcccca 14769151
>gb|AC007752.6|AC007752 Drosophila melanogaster, chromosome 3R, region 87C-87D, BAC clone BACR07J06, complete sequence Length = 193248 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggc 120 ||||||||||||||||||| Sbjct: 65264 gcctccttctcctcctggc 65282
>gb|AC108201.2| Homo sapiens BAC clone RP11-18M21 from 4, complete sequence Length = 176099 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 32024 ccctcttcctcccctcccc 32042
>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold Length = 1888123 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 ccaaatggccaagagaagc 103 ||||||||||||||||||| Sbjct: 1139628 ccaaatggccaagagaagc 1139646
>gb|AF275366.1|AF275364S3 Mus musculus epidermal growth factor receptor (Egfr) gene, exons 5 through 28, and complete cds, alternatively spliced Length = 49321 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 3752 ccctcttcctcccctcccc 3734
>gb|AC011717.6|AC011717 Arabidopsis thaliana chromosome 1 BAC F19K16 genomic sequence, complete sequence Length = 111301 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 95 aagagaagcctccttctcc 113 ||||||||||||||||||| Sbjct: 64385 aagagaagcctccttctcc 64403
>dbj|AB018710.2| Gallus gallus SF-1/Ad4BP gene for SF-1/Ad4BP, complete cds Length = 21875 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 ctcttcctcccctccccaa 88 ||||||||||||||||||| Sbjct: 16449 ctcttcctcccctccccaa 16431
>dbj|AB117771.1| Arabidopsis thaliana AT1G79840.1 gene for mutant protein of GL2, complete cds, allele: gl2-7 Length = 3921 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcc 113 ||||||||||||||||||| Sbjct: 2530 aagagaagcctccttctcc 2512
>dbj|AB117768.1| Arabidopsis thaliana AT1G79840.1 gene for mutant protein of GL2, complete cds, allele: gl2-5 Length = 3926 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcc 113 ||||||||||||||||||| Sbjct: 2543 aagagaagcctccttctcc 2525
>dbj|AB117767.1| Arabidopsis thaliana AT1G79840.1 gene for mutant protein of GL2, complete cds, allele: gl2-4 Length = 3935 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcc 113 ||||||||||||||||||| Sbjct: 2544 aagagaagcctccttctcc 2526
>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence Length = 209156 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 167517 ccctcttcctcccctcccc 167499
>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence Length = 200622 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 134662 ccctcttcctcccctcccc 134680
>gb|U95973.1|U95973 Arabidopsis thaliana chromosome 1 BAC T19D16 genomic sequence, complete sequence Length = 115641 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 aagagaagcctccttctcctcct 117 |||||||||||| |||||||||| Sbjct: 97943 aagagaagcctctttctcctcct 97965
>ref|NM_001002821.1| Rattus norvegicus histocompatibility 2, T region locus 18 (H2-T18), mRNA Length = 1097 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 cctccttctcctcctggcg 121 ||||||||||||||||||| Sbjct: 28 cctccttctcctcctggcg 46
>ref|XM_342081.2| PREDICTED: Rattus norvegicus histocompatibility 2, T region locus 18 (H2-T18), mRNA Length = 1097 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 cctccttctcctcctggcg 121 ||||||||||||||||||| Sbjct: 28 cctccttctcctcctggcg 46
>gb|AC087623.21| Homo sapiens chromosome 8, clone RP11-350N15, complete sequence Length = 162835 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 45603 ccctcttcctcccctcccc 45621
>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete sequence Length = 170376 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 72802 ccctcttcctcccctcccc 72820
>gb|AC009890.12|AC009890 Genomic Sequence For Homo sapiens Clone H_NH0262L04 From Chromosome 18, complete sequence Length = 177223 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 73756 ccctcttcctcccctcccc 73774
>gb|AC098874.6| Homo sapiens BAC clone RP11-1299G23 from 2, complete sequence Length = 136367 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 cctcttcctcccctcccca 87 ||||||||||||||||||| Sbjct: 66879 cctcttcctcccctcccca 66897
>emb|BX294109.5| Zebrafish DNA sequence from clone CH211-283P23 in linkage group 2, complete sequence Length = 72487 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 aaacccctcttcctcccct 82 ||||||||||||||||||| Sbjct: 41182 aaacccctcttcctcccct 41200
>emb|BX544874.5| Mouse DNA sequence from clone RP23-127D5 on chromosome 4, complete sequence Length = 28985 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 28891 ccctcttcctcccctcccc 28873
>emb|BX641050.1|HSM806744 Homo sapiens mRNA; cDNA DKFZp686J0697 (from clone DKFZp686J0697) Length = 3020 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggcgcta 124 ||||||| ||||||||||||||| Sbjct: 107 gcctcctgctcctcctggcgcta 129
>gb|AC154476.2| Mus musculus BAC clone RP24-133E16 from 17, complete sequence Length = 131820 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 5060 ccctcttcctcccctcccc 5042
>gb|AC008000.7|AC008000 Homo sapiens 3q25-26 BAC CITB-371O18 (California Institute of Technology BAC Library) complete sequence Length = 131105 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 cctcttcctcccctcccca 87 ||||||||||||||||||| Sbjct: 36326 cctcttcctcccctcccca 36308
>gb|AC122197.4| Mus musculus BAC clone RP23-55A6 from 10, complete sequence Length = 232763 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 86 caaatggccaagagaagcctcct 108 |||||||||||||||||| |||| Sbjct: 197614 caaatggccaagagaagcttcct 197592
>emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 in linkage group 17, complete sequence Length = 211277 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 aaacccctcttcctcccct 82 ||||||||||||||||||| Sbjct: 175673 aaacccctcttcctcccct 175655
>gb|AE003696.3| Drosophila melanogaster chromosome 3R, section 34 of 118 of the complete sequence Length = 265467 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggc 120 ||||||||||||||||||| Sbjct: 193312 gcctccttctcctcctggc 193330
>gb|AC103945.12| Mus musculus chromosome 3, clone RP23-126A18, complete sequence Length = 205072 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 121064 ccctcttcctcccctcccc 121082
>gb|AC111036.6| Mus musculus chromosome 18, clone RP24-80E15, complete sequence Length = 216052 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 80143 ccctcttcctcccctcccc 80125
>dbj|AP006219.1| Homo sapiens genomic DNA, chromosome 18, clone:RP11-243E13, complete sequence Length = 104000 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 35021 ccctcttcctcccctcccc 35003
>gb|BT001956.1| Arabidopsis thaliana clone U09291 putative homeobox protein GLABRA2 (At1g79840) mRNA, complete cds Length = 2275 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcc 113 ||||||||||||||||||| Sbjct: 1266 aagagaagcctccttctcc 1248
>gb|L32873.1|ATHGLAB Arabidopsis thaliana homeodomain protein (GLABRA2) gene, complete cds Length = 7710 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 aagagaagcctccttctcc 113 ||||||||||||||||||| Sbjct: 6346 aagagaagcctccttctcc 6328
>gb|AC137896.5| Homo sapiens chromosome 17, clone RP11-765O14, complete sequence Length = 107289 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 18055 ccctcttcctcccctcccc 18073
>gb|AC139149.6| Homo sapiens chromosome 17, clone RP13-766D20, complete sequence Length = 81577 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 8377 ccctcttcctcccctcccc 8359
>emb|AL732497.15| Mouse DNA sequence from clone RP23-130H14 on chromosome 4, complete sequence Length = 208663 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 1906 ccctcttcctcccctcccc 1888
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 cctcttcctcccctcccca 87 ||||||||||||||||||| Sbjct: 14723416 cctcttcctcccctcccca 14723434
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 cctcttcctcccctcccca 87 ||||||||||||||||||| Sbjct: 49667 cctcttcctcccctcccca 49649
>gb|AC140293.4| Mus musculus BAC clone RP24-328A10 from 13, complete sequence Length = 188473 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 134482 ccctcttcctcccctcccc 134500
>gb|AC002107.1|AC002107 Genomic sequence from Human 9q34, complete sequence Length = 39265 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggcgcta 124 ||||||| ||||||||||||||| Sbjct: 29043 gcctcctgctcctcctggcgcta 29065
>gb|AC144632.4| Mus musculus BAC clone RP23-106G16 from chromosome 15, complete sequence Length = 206265 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggc 120 ||||||||||||||||||| Sbjct: 108418 gcctccttctcctcctggc 108436
>dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17G08, TM0023, complete sequence Length = 91039 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 agagaagcctccttctcct 114 ||||||||||||||||||| Sbjct: 70831 agagaagcctccttctcct 70813
>gb|AC170997.2| Mus musculus BAC clone RP24-198N9 from chromosome 9, complete sequence Length = 146891 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 cctcccctccccaaatggc 93 ||||||||||||||||||| Sbjct: 122380 cctcccctccccaaatggc 122362
>gb|AC161499.2| Mus musculus chromosome 5, clone RP24-334E1, complete sequence Length = 163642 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 ctcttcctcccctccccaa 88 ||||||||||||||||||| Sbjct: 152802 ctcttcctcccctccccaa 152784
>emb|AL807805.7| Mouse DNA sequence from clone RP23-48K5 on chromosome 4, complete sequence Length = 183495 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 75403 ccctcttcctcccctcccc 75421
>gb|AC164612.4| Mus musculus BAC clone RP23-361B11 from chromosome 9, complete sequence Length = 202803 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 cctcccctccccaaatggc 93 ||||||||||||||||||| Sbjct: 76624 cctcccctccccaaatggc 76606
>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence Length = 225973 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 ccctcttcctcccctcccc 86 ||||||||||||||||||| Sbjct: 12774 ccctcttcctcccctcccc 12792
>emb|X52138.1|HSL7A Human L7a gene for large ribosomal subunit component (L7a) Length = 5506 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 102 gcctccttctcctcctggcgcta 124 ||||||| ||||||||||||||| Sbjct: 2155 gcctcctgctcctcctggcgcta 2177
>gb|AC018839.5| Homo sapiens chromosome 3 clone RP11-593J10 map 3p, complete sequence Length = 182288 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 cctcttcctcccctcccca 87 ||||||||||||||||||| Sbjct: 48647 cctcttcctcccctcccca 48665
>gb|AC090841.2| Homo sapiens chromosome 3 clone RP11-1082A18 map 3p, complete sequence Length = 217778 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 cctcttcctcccctcccca 87 ||||||||||||||||||| Sbjct: 180375 cctcttcctcccctcccca 180393
>dbj|AB043547.1| Homo sapiens gene for SMAD4, partial cds Length = 160820 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 accccctcacaaacagcaccata 23 ||||||||||||||||| ||||| Sbjct: 140504 accccctcacaaacagccccata 140482 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,750,124 Number of Sequences: 3902068 Number of extensions: 1750124 Number of successful extensions: 184141 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 183405 Number of HSP's gapped (non-prelim): 736 length of query: 126 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 105 effective length of database: 17,151,101,840 effective search space: 1800865693200 effective search space used: 1800865693200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
