ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet96h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CLPP2_SYNEL (Q8DJZ9) ATP-dependent Clp protease proteolytic subu... 72 1e-12
2CLPP_ARATH (P56772) ATP-dependent Clp protease proteolytic subun... 70 3e-12
3CLPP_TOBAC (P12210) ATP-dependent Clp protease proteolytic subun... 67 2e-11
4CLPP_SPIOL (Q9M3K5) ATP-dependent Clp protease proteolytic subun... 67 2e-11
5CLPP_NEPOL (Q9TL09) ATP-dependent Clp protease proteolytic subun... 67 2e-11
6CLPP_ANTFO (Q85BZ1) ATP-dependent Clp protease proteolytic subun... 66 4e-11
7CLPP_MARPO (P12208) ATP-dependent Clp protease proteolytic subun... 66 6e-11
8CLPP_CHAGL (Q8M9Y9) ATP-dependent Clp protease proteolytic subun... 66 6e-11
9CLPP_LOTJA (Q9BBQ9) ATP-dependent Clp protease proteolytic subun... 66 6e-11
10CLPP_PSINU (Q8WHZ7) ATP-dependent Clp protease proteolytic subun... 65 7e-11
11CLPP_ADICA (Q85FJ8) ATP-dependent Clp protease proteolytic subun... 65 7e-11
12CLPP_NYMAL (Q6EW27) ATP-dependent Clp protease proteolytic subun... 65 9e-11
13CLPP_CHLVU (P56317) ATP-dependent Clp protease proteolytic subun... 65 9e-11
14CLPP_CALFE (Q7YJV2) ATP-dependent Clp protease proteolytic subun... 65 1e-10
15CLPP_EPIVI (P30063) ATP-dependent Clp protease proteolytic subun... 64 2e-10
16CLPP_AMBTC (Q70XY2) ATP-dependent Clp protease proteolytic subun... 64 3e-10
17CLPP_PANGI (Q68RY2) ATP-dependent Clp protease proteolytic subun... 64 3e-10
18CLPP_HUPLU (Q5SD28) ATP-dependent Clp protease proteolytic subun... 63 4e-10
19CLPP_MESVI (Q9MUV8) ATP-dependent Clp protease proteolytic subun... 63 5e-10
20CLPP3_ANASP (Q8YP43) Probable ATP-dependent Clp protease proteol... 63 5e-10
21CLPP_PHYPA (Q6YXM7) ATP-dependent Clp protease proteolytic subun... 62 1e-09
22CLPP_PINCO (P36387) ATP-dependent Clp protease proteolytic subun... 61 2e-09
23CLPP_PINTH (P41609) ATP-dependent Clp protease proteolytic subun... 61 2e-09
24CLPP_PINKO (Q85X43) ATP-dependent Clp protease proteolytic subun... 61 2e-09
25CLPP_ACOGR (Q5QA83) ATP-dependent Clp protease proteolytic subun... 59 9e-09
26CLPP_GLOVI (Q7NEW2) ATP-dependent Clp protease proteolytic subun... 58 1e-08
27CLPP_WHEAT (P24064) ATP-dependent Clp protease proteolytic subun... 57 2e-08
28CLPP_SACOF (Q6ENT9) ATP-dependent Clp protease proteolytic subun... 57 2e-08
29CLPP_SACHY (Q6L377) ATP-dependent Clp protease proteolytic subun... 57 2e-08
30CLPP_MAIZE (P26567) ATP-dependent Clp protease proteolytic subun... 57 2e-08
31CLPP_ORYSA (P12209) ATP-dependent Clp protease proteolytic subun... 57 3e-08
32CLPP_ORYNI (Q6ENE9) ATP-dependent Clp protease proteolytic subun... 57 3e-08
33CLPP3_SYNP7 (Q9L4P3) ATP-dependent Clp protease proteolytic subu... 55 1e-07
34CLPP2_SYNP6 (Q5N1Q7) ATP-dependent Clp protease proteolytic subu... 55 1e-07
35CLPP2_PROMT (Q46JF7) ATP-dependent Clp protease proteolytic subu... 53 5e-07
36CLPP3_SYNY3 (P74467) Probable ATP-dependent Clp protease proteol... 53 5e-07
37CLPP3_SYNPX (Q7U5Q2) ATP-dependent Clp protease proteolytic subu... 52 6e-07
38CLPP2_PROMP (Q7V0F1) ATP-dependent Clp protease proteolytic subu... 52 8e-07
39CLPP_SYNP8 (Q93AD7) ATP-dependent Clp protease proteolytic subun... 52 8e-07
40CLPP2_PROMM (Q7V8M4) ATP-dependent Clp protease proteolytic subu... 52 1e-06
41CLPP2_PROMA (Q7VAR9) ATP-dependent Clp protease proteolytic subu... 52 1e-06
42CLPP_CHLEU (P42379) ATP-dependent Clp protease proteolytic subun... 45 8e-05
43CLPP_CHLRE (P42380) ATP-dependent Clp protease proteolytic subun... 45 8e-05
44CLPP_OENHO (Q9MTJ8) ATP-dependent Clp protease proteolytic subun... 45 1e-04
45CLPP2_COREF (Q8FN36) ATP-dependent Clp protease proteolytic subu... 39 0.009
46CLPP2_RHOBA (Q7UK66) ATP-dependent Clp protease proteolytic subu... 33 0.30
47HN_HENDV (O89343) Hemagglutinin-neuraminidase (EC 3.2.1.18) 33 0.52
48LONH2_THEAC (Q9HLX6) Putative protease La homolog type 2 (EC 3.4... 32 0.67
49LONH2_THEVO (P58275) Putative protease La homolog type 2 (EC 3.4... 32 0.67
50NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 pr... 32 0.88
51CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5) 32 0.88
52KSGA_STRAW (Q82HC3) Dimethyladenosine transferase (EC 2.1.1.-) (... 32 1.2
53CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (C... 31 1.5
54CLPP4_STRCO (Q9X7S0) Putative ATP-dependent Clp protease proteol... 31 1.5
55CLPP2_STRAW (Q82NZ3) ATP-dependent Clp protease proteolytic subu... 31 1.5
56CLPP1_CORJK (Q4JWV4) ATP-dependent Clp protease proteolytic subu... 31 1.5
57CLPP2_CORGL (Q8NN01) ATP-dependent Clp protease proteolytic subu... 31 1.5
58CLPP_DESPS (Q6AK59) ATP-dependent Clp protease proteolytic subun... 31 2.0
59HMSH_DROME (Q03372) Muscle segmentation homeobox (Protein drop) ... 30 2.6
60CLPP_CARHZ (Q3AF96) ATP-dependent Clp protease proteolytic subun... 30 2.6
61CAF1B_MOUSE (Q9D0N7) Chromatin assembly factor 1 subunit B (CAF-... 30 2.6
62CLPP1_ANASP (Q8YXH5) ATP-dependent Clp protease proteolytic subu... 30 2.6
63CLPP2_CORDI (Q6NFU4) ATP-dependent Clp protease proteolytic subu... 30 2.6
64CR1_HORVU (P23251) Cold-regulated protein 1 (Fragment) 30 3.3
65CLPP2_SYMTH (Q67QZ4) ATP-dependent Clp protease proteolytic subu... 30 3.3
66CLPP1_PROMP (Q7V1W0) ATP-dependent Clp protease proteolytic subu... 30 3.3
67CLPP2_ANASP (Q8YQX8) ATP-dependent Clp protease proteolytic subu... 30 3.3
68CLPP_CHLCH (Q3ATL3) ATP-dependent Clp protease proteolytic subun... 30 3.3
69CLPP1_BACSK (Q5WLZ7) ATP-dependent Clp protease proteolytic subu... 30 4.4
70CLPP1_PROMM (Q7V992) ATP-dependent Clp protease proteolytic subu... 30 4.4
71SP8_HUMAN (Q8IXZ3) Transcription factor Sp8 (Specificity protein 8) 30 4.4
72NIFU_ANAAZ (Q43885) Nitrogen fixation protein nifU 30 4.4
73CLPP_CHLTE (Q8KC73) ATP-dependent Clp protease proteolytic subun... 30 4.4
74ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrop... 30 4.4
75CLPP_FUSNN (Q8RHJ8) ATP-dependent Clp protease proteolytic subun... 29 5.7
76CLPP_DEHSC (Q3ZX82) ATP-dependent Clp protease proteolytic subun... 29 5.7
77CLPP_DEHE1 (Q3Z8J8) ATP-dependent Clp protease proteolytic subun... 29 5.7
78KSGA_STRCO (Q9K3R5) Dimethyladenosine transferase (EC 2.1.1.-) (... 29 5.7
79CLPP3_PROMP (Q7UZK7) ATP-dependent Clp protease proteolytic subu... 29 5.7
80CLPP2_NOCFA (Q5Z063) ATP-dependent Clp protease proteolytic subu... 29 5.7
81CLPP1_SYNY3 (P54416) ATP-dependent Clp protease proteolytic subu... 29 5.7
82CIC_HUMAN (Q96RK0) Protein capicua homolog 29 5.7
83HMH2_DROME (P10035) Homeobox protein H2.0 29 7.5
84CIC_MOUSE (Q924A2) Protein capicua homolog 29 7.5
85CLPP_GEOKA (Q5KVD9) ATP-dependent Clp protease proteolytic subun... 29 7.5
86CLPP1_PROMA (Q7VC22) ATP-dependent Clp protease proteolytic subu... 29 7.5
87CLPP2_SYNY3 (Q59993) ATP-dependent Clp protease proteolytic subu... 29 7.5
88AMPL2_ARATH (Q8RX72) Leucine aminopeptidase 2, chloroplast precu... 29 7.5
89CLPP1_SYNP7 (P54415) ATP-dependent Clp protease proteolytic subu... 29 7.5
90CLPP1_SYNP6 (Q5N665) ATP-dependent Clp protease proteolytic subu... 29 7.5
91CLPP_LEPIN (Q8F352) ATP-dependent Clp protease proteolytic subun... 29 7.5
92CLPP1_LEPIC (Q72SG6) ATP-dependent Clp protease proteolytic subu... 29 7.5
93RNBR_GIRCA (Q29542) Brain ribonuclease (EC 3.1.27.-) (BRB) 28 9.7
94LFTR_SYNEL (Q8DKJ8) Leucyl/phenylalanyl-tRNA--protein transferas... 28 9.7
95CLPP1_SYNPX (Q7UA36) ATP-dependent Clp protease proteolytic subu... 28 9.7
96CLPP3_PROMA (Q7V9L6) ATP-dependent Clp protease proteolytic subu... 28 9.7
97PARM1_PONPY (Q5RAF8) Protein PARM-1 precursor 28 9.7
98CLPP3_STRAW (Q82CA6) ATP-dependent Clp protease proteolytic subu... 28 9.7
99CLPP1_STRCO (Q9F315) ATP-dependent Clp protease proteolytic subu... 28 9.7
100SP8_MOUSE (Q8BMJ8) Transcription factor Sp8 28 9.7
101CLPP1_SYMTH (Q67SK0) ATP-dependent Clp protease proteolytic subu... 28 9.7
102CLPP3_PROMM (Q7V7R2) ATP-dependent Clp protease proteolytic subu... 28 9.7
103CLPP2_SYNPX (Q7U6N7) ATP-dependent Clp protease proteolytic subu... 28 9.7
104SIC1_YEAST (P38634) Protein SIC1 (CDK inhibitor p40) 28 9.7
105CLPP3_SYNP6 (Q5N1P6) ATP-dependent Clp protease proteolytic subu... 28 9.7
106CLPP2_SYNP7 (O34125) ATP-dependent Clp protease proteolytic subu... 28 9.7
107NUP62_MOUSE (Q63850) Nuclear pore glycoprotein p62 (62 kDa nucle... 28 9.7
108CLPP2_BACHD (Q9K888) ATP-dependent Clp protease proteolytic subu... 28 9.7
109CLPP2_PARUW (Q6MBE9) ATP-dependent Clp protease proteolytic subu... 28 9.7 
>CLPP2_SYNEL (Q8DJZ9) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 198

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VPYR PGE   QW+DI+N LYRERIIF+G  +D+E +NQ
Sbjct: 1   MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQ 46
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>CLPP_ARATH (P56772) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 27/46 (58%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R+PGEG   W+DI+N LYRER+ F+G  +D E SNQ
Sbjct: 1   MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQ 46
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>CLPP_TOBAC (P12210) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R+PGE    W+D++N LYRER++F+G  +D E SNQ
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQ 46
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>CLPP_SPIOL (Q9M3K5) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R+PGE    W+D++N LYRER++F+G  +D E SNQ
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQ 46
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>CLPP_NEPOL (Q9TL09) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 208

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MPVG P+VPYR PGE   QW+D++N LYR+R++F+G  + +E SNQ
Sbjct: 1   MPVGVPKVPYRLPGESAPQWVDLYNRLYRQRLLFMGQELGDELSNQ 46
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>CLPP_ANTFO (Q85BZ1) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 204

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 24/46 (52%), Positives = 37/46 (80%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R PGE    W+D++N LYRER++F+G ++D+E +NQ
Sbjct: 1   MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQHVDDEIANQ 46
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>CLPP_MARPO (P12208) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 203

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 24/46 (52%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R PGE    W+D++N LYRER++F+G  +D+E +NQ
Sbjct: 1   MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEIANQ 46
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>CLPP_CHAGL (Q8M9Y9) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 201

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 26/46 (56%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MPVG P+VPYR PG+   QW+D++N LYRERI+F+G  ++ E +NQ
Sbjct: 1   MPVGVPKVPYRLPGDVQVQWIDLYNRLYRERILFLGQTVNYEIANQ 46
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>CLPP_LOTJA (Q9BBQ9) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R+PGE    W+DI+N LYRER++F+G  ++ E SNQ
Sbjct: 1   MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVNSEISNQ 46
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>CLPP_PSINU (Q8WHZ7) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 198

 Score = 65.5 bits (158), Expect = 7e-11
 Identities = 24/46 (52%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R PGE    W+D++N LYRER++F+G  +D+E +NQ
Sbjct: 1   MPIGVPKVPFRLPGEEDAGWVDVYNRLYRERLLFLGQQVDDEIANQ 46
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>CLPP_ADICA (Q85FJ8) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 200

 Score = 65.5 bits (158), Expect = 7e-11
 Identities = 24/46 (52%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R PGE    W+D++N LYRER++F+G  +D+E +NQ
Sbjct: 1   MPIGVPKVPFRLPGEEDAVWVDVYNRLYRERLLFLGQQVDDEIANQ 46
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>CLPP_NYMAL (Q6EW27) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 202

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R+PGE    W+DI+N L+RER++F+G  +D E SNQ
Sbjct: 1   MPIGVPKVPFRSPGEEDAVWVDIYNRLHRERLLFLGQGVDSEISNQ 46
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>CLPP_CHLVU (P56317) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 201

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 24/46 (52%), Positives = 37/46 (80%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R PGE + QW+D++N LYRER++F+   +D+E +NQ
Sbjct: 1   MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQELDDELANQ 46
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>CLPP_CALFE (Q7YJV2) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 202

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 24/46 (52%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R+PGE    W+D++N L+RER++F+G  +D E SNQ
Sbjct: 1   MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQ 46
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>CLPP_EPIVI (P30063) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP++ PGE    W+D++N LYRER++F+G  +D + SNQ
Sbjct: 1   MPIGVPKVPFQIPGEEDASWVDVYNRLYRERLLFLGQEVDSDISNQ 46
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>CLPP_AMBTC (Q70XY2) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 202

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MPVG P+VP+R+PGE    W+DI+N L+RER++F+G  ++ E SNQ
Sbjct: 1   MPVGVPKVPFRSPGEEDATWVDIYNRLHRERLLFLGQEVEGEISNQ 46
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>CLPP_PANGI (Q68RY2) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R+PGE    W+DI+N LYRER++F+G  +  E SNQ
Sbjct: 1   MPIGVPKVPFRSPGEEDAYWVDIYNRLYRERLLFLGQPVASEISNQ 46
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>CLPP_HUPLU (Q5SD28) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 209

 Score = 63.2 bits (152), Expect = 4e-10
 Identities = 22/46 (47%), Positives = 36/46 (78%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R PG+    W+D++N L+RER++F+G  +D+E +NQ
Sbjct: 1   MPIGVPKVPFRLPGDEDAVWIDVYNRLFRERLLFLGQQVDDELANQ 46
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>CLPP_MESVI (Q9MUV8) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 229

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 24/46 (52%), Positives = 37/46 (80%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+V YR PGE    ++D++N LYRERI+F+G+++D+E +NQ
Sbjct: 1   MPIGIPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQ 46
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>CLPP3_ANASP (Q8YP43) Probable ATP-dependent Clp protease proteolytic subunit 3|
           (EC 3.4.21.92) (Endopeptidase Clp 3)
          Length = 197

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VPYR PG     W+ I++ LYRERIIF+G ++D+E +NQ
Sbjct: 1   MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQ 46
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>CLPP_PHYPA (Q6YXM7) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 199

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 24/47 (51%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIW-NALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+VP+R PGE    W+D++ N LYRER++F+G ++D+E +NQ
Sbjct: 1   MPIGVPKVPFRLPGEEDAVWIDVYNNRLYRERLLFLGQHVDDEIANQ 47
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>CLPP_PINCO (P36387) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 205

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MPVG P+VP+R PG+    W+D++N LYRER++F+  +I+ E +NQ
Sbjct: 1   MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQ 46
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>CLPP_PINTH (P41609) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MPVG P+VP+R PG+    W+D++N LYRER++F+  +I+ E +NQ
Sbjct: 1   MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQ 46
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>CLPP_PINKO (Q85X43) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 23/46 (50%), Positives = 35/46 (76%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MPVG P+VP+R PG+    W+D++N LYRER++F+  +I+ E +NQ
Sbjct: 1   MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQ 46
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>CLPP_ACOGR (Q5QA83) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 202

 Score = 58.5 bits (140), Expect = 9e-09
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P+V + +PGE    W+DI+N L+RER++F+G  +D E SNQ
Sbjct: 1   MPIGVPKVLFGSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQ 46
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>CLPP_GLOVI (Q7NEW2) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 197

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 25/45 (55%), Positives = 34/45 (75%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+G P+VPYR PG G  QW+DI+N L  +RIIF+G  +D+E +N
Sbjct: 1   MPIGIPKVPYRLPG-GQSQWIDIFNRLALDRIIFLGREVDDEIAN 44
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>CLPP_WHEAT (P24064) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 216

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+G P+VPYR PG+    W+D++N +YRER +F+G  I  E +N
Sbjct: 1   MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITN 45
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>CLPP_SACOF (Q6ENT9) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 216

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+G P+VPYR PG+    W+D++N +YRER +F+G  I  E +N
Sbjct: 1   MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITN 45
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>CLPP_SACHY (Q6L377) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 216

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+G P+VPYR PG+    W+D++N +YRER +F+G  I  E +N
Sbjct: 1   MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITN 45
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>CLPP_MAIZE (P26567) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 216

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+G P+VPYR PG+    W+D++N +YRER +F+G  I  E +N
Sbjct: 1   MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITN 45
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>CLPP_ORYSA (P12209) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 216

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+G P+VPYR PG+    W+D++N +YRER +F+G  I  E +N
Sbjct: 1   MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTN 45
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>CLPP_ORYNI (Q6ENE9) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 216

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 22/45 (48%), Positives = 32/45 (71%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+G P+VPYR PG+    W+D++N +YRER +F+G  I  E +N
Sbjct: 1   MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTN 45
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>CLPP3_SYNP7 (Q9L4P3) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 199

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+G P VPYR PG    +W+DI+N L  ERIIF+G  + +  +N
Sbjct: 1   MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLAN 45
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>CLPP2_SYNP6 (Q5N1Q7) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 199

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+G P VPYR PG    +W+DI+N L  ERIIF+G  + +  +N
Sbjct: 1   MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLAN 45
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>CLPP2_PROMT (Q46JF7) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 200

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+GTP VPYR PG    +W+DI+  L  ERI+F+G  +++  +N
Sbjct: 1   MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVNDGIAN 45
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>CLPP3_SYNY3 (P74467) Probable ATP-dependent Clp protease proteolytic subunit 3|
           (EC 3.4.21.92) (Endopeptidase Clp 3)
          Length = 202

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 20/46 (43%), Positives = 32/46 (69%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P VP+R PG    +W+DI+  L +ERIIF+G  +++  +N+
Sbjct: 1   MPIGVPSVPFRLPGSQYERWIDIYTRLSQERIIFLGQEVNDSIANR 46
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>CLPP3_SYNPX (Q7U5Q2) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 200

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+GTP VPYR PG    +W+DI+  L  ERI+F+G  +++  +N
Sbjct: 1   MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIAN 45
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>CLPP2_PROMP (Q7V0F1) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 201

 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+GTP VPYR PG    +W+DI+  L  ERI+F+G  +++  +N
Sbjct: 1   MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIAN 45
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>CLPP_SYNP8 (Q93AD7) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 199

 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 21/46 (45%), Positives = 31/46 (67%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G P VPYR PG    +W+DI+  L +ERIIF+G  + +  +N+
Sbjct: 1   MPLGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANR 46
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>CLPP2_PROMM (Q7V8M4) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 200

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+GTP VPYR PG    +W+DI+  L  ERI+F+G  + +  +N
Sbjct: 1   MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVAN 45
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>CLPP2_PROMA (Q7VAR9) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 200

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+GTP VPYR PG    +W+DI+  L  ERI+F+G  + +  +N
Sbjct: 1   MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVTDGVAN 45
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>CLPP_CHLEU (P42379) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp) [Contains: Ceu clpP
           intein (Insertion IS2)]
          Length = 1010

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G PR+ Y    E   QW DI+N ++R R++F+   +D+E  NQ
Sbjct: 1   MPIGVPRIIYCWGEELPAQWTDIYNFIFRRRMVFLMQYLDDELCNQ 46
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>CLPP_CHLRE (P42380) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 524

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 19/46 (41%), Positives = 29/46 (63%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           MP+G PR+ Y    E   QW DI+N ++R R++F+   +D+E  NQ
Sbjct: 1   MPIGVPRIIYCWGEELPAQWTDIYNFIFRRRMVFLMQYLDDELCNQ 46
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>CLPP_OENHO (Q9MTJ8) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 249

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
 Frame = +3

Query: 324 MPVGTPRVPYRTPG------EGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           MP+G P++P+   G      E    W+D++N LYR R IF+GD I  E +N
Sbjct: 1   MPIGMPKIPFLLDGDEEDEEEDDATWVDLYNVLYRTRSIFLGDAIHFEVAN 51
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>CLPP2_COREF (Q8FN36) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 199

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +3

Query: 360 PGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           PG GT    DI++ L RERIIF+G  +D+E +N+
Sbjct: 10  PGAGTGYSGDIFDRLLRERIIFLGSQVDDEIANK 43
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>CLPP2_RHOBA (Q7UK66) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 195

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 339 PRVPYRTPGEGTWQ-WLDIWNALYRERIIFIGDNIDEEFSN 458
           P +PY     G  +   DI++ L ++RIIF+G  +D++ SN
Sbjct: 2   PVIPYVVESNGREERTYDIYSRLLKDRIIFLGQQVDDQISN 42
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>HN_HENDV (O89343) Hemagglutinin-neuraminidase (EC 3.2.1.18)|
          Length = 604

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 15/60 (25%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
 Frame = +3

Query: 126 HPRAVASSPSSLSVGTKVF---VGLKAQTRLGSSESSCPNVNARFYTAVNRRVSLGLSNK 296
           + + +   PS +  G  ++   VG   +T    ++S+CP ++ ++  A N R+S+G+++K
Sbjct: 345 YDKVMPYGPSGIKQGDTLYFPAVGFLPRTEFQYNDSNCPIIHCKYSKAENCRLSMGVNSK 404
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>LONH2_THEAC (Q9HLX6) Putative protease La homolog type 2 (EC 3.4.21.-)|
          Length = 493

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 19/38 (50%), Positives = 22/38 (57%)
 Frame = -3

Query: 190 SPTKTLVPTLREEGELATARGWKQEELAGAVRHSAIGG 77
           SP+KT+VP  R    LAT  G  + EL G VRH   GG
Sbjct: 220 SPSKTIVPIDRNPFVLAT--GASETELLGDVRHDPYGG 255
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>LONH2_THEVO (P58275) Putative protease La homolog type 2 (EC 3.4.21.-)|
          Length = 495

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 19/38 (50%), Positives = 22/38 (57%)
 Frame = -3

Query: 190 SPTKTLVPTLREEGELATARGWKQEELAGAVRHSAIGG 77
           SP+KT+VP  R    LAT  G  + EL G VRH   GG
Sbjct: 220 SPSKTIVPIDRNPFVLAT--GASETELLGDVRHDPYGG 255
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>NOTC4_MOUSE (P31695) Neurogenic locus notch homolog protein 4 precursor (Notch 4)|
            [Contains: Transforming protein Int-3; Notch 4
            extracellular truncation; Notch 4 intracellular domain]
          Length = 1964

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
 Frame = +3

Query: 30   PVIRSATVHSRATPQPPPMALCRTAPANSSCFHPR----AVASSPSSLSVGTKVFVGLKA 197
            P  + A  H+R TP     A CRT  A +    PR     + +   S+ +G +   G K 
Sbjct: 1819 PTTQEARAHARTTPGGGAAARCRTLSAGA---RPRGGGACLQARTWSVDLGAR---GGKV 1872

Query: 198  QTRLGSSESSCPNVNARFYTAVNRRVSLGLSNKRATRA 311
              R  S   SC     R      RR S G   +R  RA
Sbjct: 1873 YARCRSRSGSCGGPTTR-----GRRFSAGSRGRRGARA 1905
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>CXX1_HUMAN (O15255) CAAX box protein 1 (Cerebral protein 5)|
          Length = 209

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 17  PLPPPRYPFRHCSLPSHSAASSNGAVP 97
           PL PPR P R CSLP  +   S  + P
Sbjct: 44  PLEPPRCPLRSCSLPRSACLCSRNSAP 70
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>KSGA_STRAW (Q82HC3) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 295

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
 Frame = +3

Query: 33  VIRSATVHSRATPQPPPMALCRTAPANSS---CFHPRAVASSPSSLSVGTKVFVGLKAQT 203
           ++ S  +H R  P PPP AL    P N +     H      S     V  +  V  +   
Sbjct: 107 LVHSDAMHVRELPGPPPTALVANLPYNVAVPVLLHMLDTFPSIERTLVMVQAEVADRLAA 166

Query: 204 RLGSSESSCPNVNARFYTAVNRRVSLG 284
             GS     P+V A ++  V R  S+G
Sbjct: 167 DPGSRVYGVPSVKANWHAEVKRAGSIG 193
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>CNOT3_HUMAN (O75175) CCR4-NOT transcription complex subunit 3 (CCR4-associated|
           factor 3)
          Length = 753

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 2/115 (1%)
 Frame = +3

Query: 24  LRPVIRSATVHSRATPQPPPMALCRTAPANSSCFHPRAVASSPSSLSVGTKVFVGLKAQT 203
           L P    A  H+  TP P   A+   AP+  S   PR  +  PS    G     G  + +
Sbjct: 353 LGPKASPAPSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSS 412

Query: 204 RLGSSESSCPNVNARFYTAV--NRRVSLGLSNKRATRARISMMPVGTPRVPYRTP 362
              +   +     A  Y++V  +    + LS+     A  S   +G P  P+  P
Sbjct: 413 NSSAGGGAGKQNGATSYSSVVADSPAEVALSSSGGNNA--SSQALGPPSGPHNPP 465
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>CLPP4_STRCO (Q9X7S0) Putative ATP-dependent Clp protease proteolytic|
           subunit-like (Endopeptidase Clp-like)
          Length = 200

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 339 PRVPYRTP-GEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           P V  RTP GE ++   D+++ L  ERIIF+G  ID+  +N
Sbjct: 7   PNVVERTPQGERSY---DVFSRLLSERIIFLGTEIDDGVAN 44
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>CLPP2_STRAW (Q82NZ3) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 200

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 339 PRVPYRTP-GEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           P V  RTP GE ++   D+++ L  ERIIF+G  ID+  +N
Sbjct: 7   PNVVERTPQGERSY---DVFSRLLSERIIFLGTEIDDGVAN 44
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>CLPP1_CORJK (Q4JWV4) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 188

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 390 IWNALYRERIIFIGDNIDEEFSNQ 461
           ++  L RERIIF+G  +D+E +N+
Sbjct: 12  VYERLLRERIIFLGSQVDDEIANE 35
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>CLPP2_CORGL (Q8NN01) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 201

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 360 PGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           PG G     D+++ L  ERIIF+G  +D+E +N+
Sbjct: 16  PGFGN----DVFDRLLSERIIFLGSQVDDEIANK 45
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>CLPP_DESPS (Q6AK59) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 203

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
 Frame = +3

Query: 339 PRVPYRTP-GEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           P V  +TP GE ++   DI++ L +ERIIF+G  ++++ +N
Sbjct: 5   PMVVEQTPRGERSY---DIYSRLLKERIIFLGSGVNDDVAN 42
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>HMSH_DROME (Q03372) Muscle segmentation homeobox (Protein drop) (Protein msh)|
          Length = 515

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 63  ATPQPPPMALCRTAPANSSCFHPRAVA 143
           +TP PPP +     PAN+  FHP AVA
Sbjct: 173 STPPPPPASAAAQVPANT--FHPAAVA 197
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>CLPP_CARHZ (Q3AF96) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 195

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DIW+ L ++R IFIG  ID+  +N
Sbjct: 20  DIWSRLLKDRTIFIGGPIDDHVAN 43
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>CAF1B_MOUSE (Q9D0N7) Chromatin assembly factor 1 subunit B (CAF-1 subunit B)|
           (Chromatin assembly factor I p60 subunit) (CAF-I 60 kDa
           subunit) (CAF-Ip60)
          Length = 572

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
 Frame = +3

Query: 81  PMALCRTAPANSSCFHPRAVASSPSSLSVGTKVFVGLKAQTRLGSSESSCPNVNARFYTA 260
           P + C T    +    P A+  SPS++  G       K+     S E +           
Sbjct: 434 PSSPCTTPSPTTQSPAPSAIKDSPSAIPAG-------KSPLPQPSEEKTLQPAGQNMKAP 486

Query: 261 VNRRVSLGLS---NKRATRARISMMPVGTPRVPYRTPGEGT 374
             RRV+L       K A R RI++ P+ T  VP   P  GT
Sbjct: 487 QPRRVTLNTLQTWGKTAPR-RINLTPLKTDTVPNPQPNSGT 526
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>CLPP1_ANASP (Q8YXH5) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 204

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L RERI+F+G  +D   +N
Sbjct: 18  DIYSRLLRERIVFLGQQVDSNLAN 41
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>CLPP2_CORDI (Q6NFU4) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 199

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +3

Query: 390 IWNALYRERIIFIGDNIDEEFSNQ 461
           ++  L RERIIF+G  +D+E +N+
Sbjct: 20  VYERLLRERIIFLGTQVDDEIANK 43
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>CR1_HORVU (P23251) Cold-regulated protein 1 (Fragment)|
          Length = 127

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
 Frame = +3

Query: 120 CFHPRAVASSPSSLSVGTKVFVGLK----AQTRLGSSESSCPNVNARFYTAVNRRVSLGL 287
           C    A    PS   +  ++F G      A+T    + S+C  +  R  T   RR     
Sbjct: 34  CCSEEARGPPPSPAPLPARLFPGRASSPLARTPSAGAASACKPLLERLPTPSRRR----- 88

Query: 288 SNKRATRARISMMPVGTPRVPYRTPGEGTW 377
             +RATR   S MP  TP    R P    W
Sbjct: 89  RRRRATRRARSRMPRTTPWRAPRAPARAWW 118
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>CLPP2_SYMTH (Q67QZ4) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 200

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L ++RIIF+G +ID++ +N
Sbjct: 20  DIYSRLLKDRIIFLGTSIDDQVAN 43
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>CLPP1_PROMP (Q7V1W0) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 196

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +3

Query: 369 GTWQWLDIWNALYRERIIFIGDNIDEEFSNQ 461
           G+ +  DI++ L RERIIF+G+ +  + +N+
Sbjct: 11  GSERVFDIYSRLLRERIIFLGEQVTSDTANR 41
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>CLPP2_ANASP (Q8YQX8) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 232

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L RERIIF+G  ID+  +N
Sbjct: 45  DIYSRLLRERIIFLGTPIDDAVAN 68
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>CLPP_CHLCH (Q3ATL3) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 225

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +3

Query: 357 TPGEGTWQWLDIWNALYRERIIFIGDNIDE 446
           T G G  +  DI++ L RERIIF+G  IDE
Sbjct: 35  TSGRGE-RAFDIFSRLLRERIIFLGTGIDE 63
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>CLPP1_BACSK (Q5WLZ7) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 193

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L ++RIIFIGD I +  +N
Sbjct: 20  DIYSRLLKDRIIFIGDEITDTLAN 43
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>CLPP1_PROMM (Q7V992) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 224

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L RERIIF+G  +D++ ++
Sbjct: 41  DIYSRLLRERIIFLGTGVDDQVAD 64
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>SP8_HUMAN (Q8IXZ3) Transcription factor Sp8 (Specificity protein 8)|
          Length = 508

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = +3

Query: 42  SATVHSRATPQPPPMALCRTAPANSSCFHPRAVASSPSSLS---VGTKV-FVGLKAQTRL 209
           +AT +   +P P P +L  ++ +    FHP   +SS SS S   VG+ +   G+   +R 
Sbjct: 21  AATCNKIGSPSPSPSSLSDSSSSFGKGFHPWKRSSSSSSASCNVVGSSLSSFGVSGASRN 80

Query: 210 GSSESS 227
           G S S+
Sbjct: 81  GGSSSA 86
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>NIFU_ANAAZ (Q43885) Nitrogen fixation protein nifU|
          Length = 300

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 229 HDDSDEPSLVC-AFSPTKTLVPTLREEGELATARGWKQEELAGAVRHSAIGGGCG 68
           HDD DE +LVC  F  ++  V  +  E +L +A     E++   ++    GGGCG
Sbjct: 135 HDDEDEGALVCTCFGVSENKVRRIVIENDLTSA-----EQVTNYIK---AGGGCG 181
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>CLPP_CHLTE (Q8KC73) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 225

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = +3

Query: 357 TPGEGTWQWLDIWNALYRERIIFIGDNIDE 446
           T G G  +  DI++ L RERIIF+G  IDE
Sbjct: 35  TSGRGE-RAFDIFSRLLRERIIFLGSPIDE 63
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>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1183

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 17  PLPPPRYPFRHCSLPSHSAASSNGA 91
           P PP RYP+  CS  S +A+SS+ A
Sbjct: 368 PGPPMRYPYSSCSSSSVAASSSSSA 392
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>CLPP_FUSNN (Q8RHJ8) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 193

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L ++RIIF+G  IDE  +N
Sbjct: 18  DIYSRLLKDRIIFVGTAIDETVAN 41
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>CLPP_DEHSC (Q3ZX82) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 200

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L +ERIIF+G  I+++ +N
Sbjct: 23  DIYSLLLKERIIFLGSQINDQVAN 46
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>CLPP_DEHE1 (Q3Z8J8) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 200

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L +ERIIF+G  I+++ +N
Sbjct: 23  DIYSLLLKERIIFLGSQINDQVAN 46
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>KSGA_STRCO (Q9K3R5) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 286

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 23/87 (26%), Positives = 32/87 (36%), Gaps = 3/87 (3%)
 Frame = +3

Query: 33  VIRSATVHSRATPQPPPMALCRTAPANSSC---FHPRAVASSPSSLSVGTKVFVGLKAQT 203
           ++ S  +H R  P P P AL    P N +     H            V  +  V  +   
Sbjct: 107 LVHSDAMHVRELPGPAPTALVANLPYNVAVPVLLHMLDTFPGIERTLVMVQAEVADRLAA 166

Query: 204 RLGSSESSCPNVNARFYTAVNRRVSLG 284
             GS     P+V A +Y  V R  S+G
Sbjct: 167 GPGSKVYGVPSVKANWYAEVKRAGSIG 193
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>CLPP3_PROMP (Q7UZK7) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 215

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L RERIIF+G  I+++ S+
Sbjct: 40  DIYSRLLRERIIFLGTGINDQVSD 63
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>CLPP2_NOCFA (Q5Z063) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 203

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +3

Query: 390 IWNALYRERIIFIGDNIDEEFSNQ 461
           ++  L RERIIF+G  +D++ +N+
Sbjct: 22  VYERLLRERIIFLGTQVDDDIANK 45
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>CLPP1_SYNY3 (P54416) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 198

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 357 TPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSN 458
           T G G  +  DI++ L RERI+F+G  + +E +N
Sbjct: 8   TSGRGD-RAFDIYSRLLRERIVFLGQEVRDENAN 40
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>CIC_HUMAN (Q96RK0) Protein capicua homolog|
          Length = 1608

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
 Frame = +3

Query: 30  PVIRSATVHSRAT-------PQPPPMALCR---TAPANSSCFHPRAVASSPSSLSVGTKV 179
           PVIRS+  H R         P  PP+A  +   +AP++S+     + AS+ +S S+G+  
Sbjct: 497 PVIRSSFTHCRPPLDPEPPGPPDPPVAFGKGYGSAPSSSASSPASSSASAATSFSLGSGT 556

Query: 180 F 182
           F
Sbjct: 557 F 557
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>HMH2_DROME (P10035) Homeobox protein H2.0|
          Length = 418

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 75  PPPMALCRTAPANSSCFHPRAVASSPSSLSVGTKVFVGLKAQTRLGS 215
           P P+ +    P   SC     V++SP+S +  TKV +       LGS
Sbjct: 36  PDPVNVDHELPTKESCASTTIVSTSPTSATSTTKVKLSFSVDRLLGS 82
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>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 30  PVIRSATVHSRATPQPPPMALCRTAPANSSCFHPR-AVASSPSSLSVGTKVFVGLKAQT 203
           PVIRS+  H R T  P P        A S  + P  + +SSP+S SV       L + T
Sbjct: 497 PVIRSSFTHCRPTLDPEPPGPPDPPAAFSKGYGPTPSSSSSPASTSVSVSTSFSLGSGT 555
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>CLPP_GEOKA (Q5KVD9) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 196

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L ++RI+F+G  ID++ +N
Sbjct: 19  DIYSRLLKDRIVFLGSPIDDQVAN 42
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>CLPP1_PROMA (Q7VC22) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 196

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSNQ 461
           DI++ L RERI+F+G+ +  + +N+
Sbjct: 17  DIYSRLLRERIVFLGEQVTNDSANR 41
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>CLPP2_SYNY3 (Q59993) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 226

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L RERIIF+G  +D++ ++
Sbjct: 39  DIYSRLLRERIIFLGTPVDDQVAD 62
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>AMPL2_ARATH (Q8RX72) Leucine aminopeptidase 2, chloroplast precursor (EC|
           3.4.11.1) (LAP 2) (Leucyl aminopeptidase 2) (Proline
           aminopeptidase 2) (EC 3.4.11.5) (Prolyl aminopeptidase
           2)
          Length = 581

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 20/45 (44%), Positives = 27/45 (60%)
 Frame = +3

Query: 99  TAPANSSCFHPRAVASSPSSLSVGTKVFVGLKAQTRLGSSESSCP 233
           T+ A+SS FH R+ +SSPSSLS     FV  +  +RL  S +  P
Sbjct: 7   TSCASSSRFHFRSFSSSPSSLS---SCFVRFQLLSRLRVSFAITP 48
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>CLPP1_SYNP7 (P54415) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 197

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSNQ 461
           DI++ L RERIIF+G+ +  + +N+
Sbjct: 17  DIYSRLLRERIIFLGEPVTSDVANR 41
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>CLPP1_SYNP6 (Q5N665) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 197

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSNQ 461
           DI++ L RERIIF+G+ +  + +N+
Sbjct: 17  DIYSRLLRERIIFLGEPVTSDVANR 41
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>CLPP_LEPIN (Q8F352) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 198

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 10/24 (41%), Positives = 21/24 (87%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L ++RIIF+G+ I+++++N
Sbjct: 19  DIFSRLLKDRIIFLGNAINDDYAN 42
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>CLPP1_LEPIC (Q72SG6) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 198

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 10/24 (41%), Positives = 21/24 (87%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L ++RIIF+G+ I+++++N
Sbjct: 19  DIFSRLLKDRIIFLGNAINDDYAN 42
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>RNBR_GIRCA (Q29542) Brain ribonuclease (EC 3.1.27.-) (BRB)|
          Length = 141

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -1

Query: 399 HSICQATARFLHQVFCKVPVVCRQASLKCVPW*PSC 292
           H  C+    F+H+    V  VC Q ++ C    P+C
Sbjct: 37  HGRCKPVNTFVHESLADVKAVCSQKNITCKNGQPNC 72
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>LFTR_SYNEL (Q8DKJ8) Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)|
           (L/F-transferase) (Leucyltransferase)
           (Phenyalanyltransferase)
          Length = 196

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
 Frame = -3

Query: 199 CAFSPTKTLVPTLREEGELATARGW-------KQEELAGAVRHSAIGG 77
           CA  P   + P L+E   L  A GW       + +ELAG +    IGG
Sbjct: 78  CADRPMTWITPRLKEVYHLLYATGWAVSFETWQGDELAGGILGIVIGG 125
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>CLPP1_SYNPX (Q7UA36) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 224

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDE 446
           DI++ L RERIIF+G  +D+
Sbjct: 41  DIYSRLLRERIIFLGTGVDD 60
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>CLPP3_PROMA (Q7V9L6) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 216

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 10/24 (41%), Positives = 20/24 (83%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L RERIIF+G +++++ ++
Sbjct: 41  DIYSRLLRERIIFLGTDVNDQIAD 64
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>PARM1_PONPY (Q5RAF8) Protein PARM-1 precursor|
          Length = 310

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 54  HSRATPQPPPMA-LCRTAPANSSCFHPRAVASSPSSLSVGTKVFVGLKAQTRLGSSESS 227
           HS  TP+    A L ++A    +   P+A ASSPSSLS        +   T   S+ +S
Sbjct: 125 HSLGTPEAGVAATLSQSAAEPPTLISPQAPASSPSSLSTSPPEVFSVSVTTNHSSTVTS 183
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>CLPP3_STRAW (Q82CA6) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 219

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +3

Query: 390 IWNALYRERIIFIGDNIDEEFSNQ 461
           ++N L  ERIIF+G  +D++ +N+
Sbjct: 35  VYNRLLGERIIFLGQAVDDDIANK 58
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>CLPP1_STRCO (Q9F315) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 219

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +3

Query: 390 IWNALYRERIIFIGDNIDEEFSNQ 461
           ++N L  ERIIF+G  +D++ +N+
Sbjct: 36  VYNRLLGERIIFLGQPVDDDIANK 59
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>SP8_MOUSE (Q8BMJ8) Transcription factor Sp8|
          Length = 486

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
 Frame = +3

Query: 42  SATVHSRATPQPPPMALCRTAPANSSCFHPRAVASSPSSLS---VGTKV-FVGLKAQTRL 209
           +AT +   +P P P +L  ++ +    FHP   +SS SS S   VG+ +   G+   +R 
Sbjct: 3   AATCNKIGSPSPSPSSLSDSSSSFGKGFHPWKRSSSSSSGSCNVVGSSLSSFGVSGASRN 62

Query: 210 GSSESS 227
           G S S+
Sbjct: 63  GGSSSA 68
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>CLPP1_SYMTH (Q67SK0) ATP-dependent Clp protease proteolytic subunit 1 (EC|
           3.4.21.92) (Endopeptidase Clp 1)
          Length = 202

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L ++RI+F+G  ID++ +N
Sbjct: 20  DIYSRLLKDRIVFLGTPIDDQVAN 43
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>CLPP3_PROMM (Q7V7R2) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 197

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSNQ 461
           DI++ L RERIIF+G+ +  + +N+
Sbjct: 17  DIYSRLLRERIIFLGEPVTSDSANR 41
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>CLPP2_SYNPX (Q7U6N7) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 197

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSNQ 461
           DI++ L RERIIF+G+ +  + +N+
Sbjct: 17  DIYSRLLRERIIFLGEAVTSDSANR 41
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>SIC1_YEAST (P38634) Protein SIC1 (CDK inhibitor p40)|
          Length = 284

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +3

Query: 42  SATVHSRATPQPPPMALCRTAPANSSCFHPRAVASSPSSLSVGTKVFVGLKAQTRLGSSE 221
           SA +  + TPQ P   L    P+ +  F    + + P+S    T  F GL +  R    +
Sbjct: 25  SALMQGQKTPQKPSQNLVPVTPSTTKSFKNAPLLAPPNSNMGMTSPFNGLTSPQRSPFPK 84

Query: 222 SSCPNVNARFYTAVNRRV 275
           SS      +F +  N  V
Sbjct: 85  SSVKRTLFQFESHDNGTV 102
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>CLPP3_SYNP6 (Q5N1P6) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 240

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +3

Query: 264 NRRVSLGLSNKRATRARISMMPVGTPRVPYRTPGEGTWQW-LDIWNALYRERIIFIGDNI 440
           +RR++ GL + R  + +I  +      VP      G  +   DI++ L RERI+F+G  +
Sbjct: 12  SRRLAAGLDS-RWQQPQIQAIAGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGV 70

Query: 441 DE 446
           D+
Sbjct: 71  DD 72
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>CLPP2_SYNP7 (O34125) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 240

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +3

Query: 264 NRRVSLGLSNKRATRARISMMPVGTPRVPYRTPGEGTWQW-LDIWNALYRERIIFIGDNI 440
           +RR++ GL + R  + +I  +      VP      G  +   DI++ L RERI+F+G  +
Sbjct: 12  SRRLAAGLDS-RWQQPQIQAIAGSQAIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGV 70

Query: 441 DE 446
           D+
Sbjct: 71  DD 72
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>NUP62_MOUSE (Q63850) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 526

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 27/116 (23%), Positives = 42/116 (36%)
 Frame = +3

Query: 12  STLFLRPVIRSATVHSRATPQPPPMALCRTAPANSSCFHPRAVASSPSSLSVGTKVFVGL 191
           STLF       A+  +     P P+    T  A +  F  +A  ++P + +  T      
Sbjct: 221 STLFASIAAAPASSSATGLSLPAPVTTAATPSAGTLGFSLKAPGAAPGASTTSTTTTTTT 280

Query: 192 KAQTRLGSSESSCPNVNARFYTAVNRRVSLGLSNKRATRARISMMPVGTPRVPYRT 359
              T   ++ S+       F  ++   VS G S+  AT    S    GT   P  T
Sbjct: 281 TTTTAAAAAAST---TTTGFALSLKPLVSAGPSSVAATALPASSTAAGTATGPAMT 333
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>CLPP2_BACHD (Q9K888) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 194

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +3

Query: 387 DIWNALYRERIIFIGDNIDEEFSN 458
           DI++ L ++RI+F+G  ID++ +N
Sbjct: 20  DIYSRLLKDRIVFLGAAIDDQIAN 43
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>CLPP2_PARUW (Q6MBE9) ATP-dependent Clp protease proteolytic subunit 2 (EC|
           3.4.21.92) (Endopeptidase Clp 2)
          Length = 207

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +3

Query: 384 LDIWNALYRERIIFIGDNIDEEFSN 458
           +DI++ L ++RIIFIG  I ++ +N
Sbjct: 28  MDIYSRLLKDRIIFIGTEITDQVAN 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,189,763
Number of Sequences: 219361
Number of extensions: 1303727
Number of successful extensions: 4999
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 4815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4993
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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